Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0005981

Physical Location & Seq

Genomic Coordinates Reverse (-)

47716000 .. 47722671

Gene Structure 6672 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1386100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGAGTTCGAATTCGGATTTGGTACGCGCGTTGGAGTCGGCGCTGGGGGTTTCGTTCGGTGGTTCGGTGACGGACACGGTGGTGGTGATCGCGACGACTTCAATTGCGCTGATAATTGGGGTTTTGGTATTGGTGTGGAGGAGATCGTCGGATCGGAGCCGGGAGGTGAAGCAGCTGGTGGTGCCCAAGCCGCTTGCTGTGGAGGAAGAGAAAGACGAGTTTGAGGTTGCAGCGGGGAAGATTCGGGTGACGATCTTCTATGGAACTCAGACTGGTACAGCTGAGGGATTCGCTAAGGCTTTGGCTGAGGAGATTAAGGCTAGATATGAGAAAGCTGCTGTGAAGGTTGTCGACCTGGATGACTATGCTGAGGATGATGATAAATATGAAGAAAAACTGAAAAAAGAGACTTTGGCATTTTTTATGTTGGCCACTTATGGAGATGGGGAGCCAACTGATAATGCAGCAAGATTTTACAAATGGTTTACGGAGGGAAAAGATAGGGGTGATTGGCTTCAACATCTAAGATATGGTGTTTTTGCTCTGGGTAACCGACAATATGAACATTTCAATAAGGTAGGAAAAGTGGTTGATGATAAACTTAGTGAAGAAGGTGCAAAGCGTCTTGTTCCTGTTGGCTTAGGTGATGATGACCAGTGCATCGAGGATGATTTTTCTGCTTGGAGGGAATCATTGTGGCCTGAGTTGGATCTATTCCTCCGAGATGAAGATGATACAAATTCTGCGGCTACTCCATATACAGCTGTAATTCCAGAATATAGAGTTGTTATTCATGACTCTAGTTTTGTTACTTCTCATGAGGACAATCACTTGAATATGGCCAATGGGAATGCTTCTTACGATATTCACCATCCTTGCAGAGTTAATGTTGCTGTTCAAAGAGAACTTCACAAACCTGAGTCTGACCGCTCTTGCATCCATCTGGAGTTTGATATCTCTGGAACTGGTATTACATATGAAACTGGAGACCATGTGGGTGTTTATGCAGACAATTGTGATGAAACAGTTGAAGAAGCTGCAAAGTACTTGGGCCAACCTTTAGATTTGCTATTCTCCATACATACTGACAATGATGATGGCACGTCTCTTGGAAGCTCATTACCGCCTCCATTCCCTGGTCCTTGCACAGTCCGCACAGCATTGGCACGTTATGCTGATCTGTTGAATCCACCTCGGAAGGCTGCCCTACTTGCTTTGGCTGCACATGCTGTTGAACCGAGTGAAGCACAAAGACTTAAATTTTTATCATCACCTCAGGGGAAGGATGAGTACTCAAAATGGATTGTTGGAAGTCAGAGAAGTCTTGTTGAGGTAATGGCTGAGTTCCAATCAGCAAAGCCTCCACTTGGTGTGTTTTTTGCTGCAGTAGCCCCTCGCTTACAGCCTCGTTACTATTCCATATCATCTTCACCAAGATTTGCGCCCCATCGTGTTCATGTGACCTGTGCTTTAGTTTATGGTCCAACACCAACCGGTAGAATTCACAAAGGAGTGTGTTCATTCTGGATGAAGAATGCAGTTCCTCTAGAGAAAAGCCATAACAGTAGCTGGGCTCCTATTTTTATTAGGCAATCCAATTTCAACCTACCTGATGATCCTTTAGTCCCAATTATCATGGTGGGGCCTGGTACGGGCTTCGCACCTTTCCGAGGATTTCTACAGGAAAGGATGGCCCTGAAAAAGGAGGGTGCTCAATTAGGACCTGCACTGCTCTTCTTTGGATGTAGAAACCGCAGAATGGATTTCATTTATGAAGATGAATTGAATAACTTTGTGGAAGAAGGTGTGTTGTCTGAGTTAATCGTTGCATTCTCGCGCGAGGGACCAACCAAGGAGTATGTTCAACATAAACTGATGGATAAAGCAGCATACGTGTGGGACCTAGTATCTCAAGGGGGGTACTTTTATGTTTGTGGTGACGCCAAAGGAATGGCTAGAGATGTTCATCGGACTTTGCATACCATTGTCCAGCAGCAGGAAAAGGTGGACTCAACGAAAGCAGAAGCTACAGTGAAACGACTTCAGATGGATGGACGATACCTTAGAGACGTCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0003958 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006725 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009698 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0012505 GO:0016491 GO:0016651 GO:0016653 GO:0019748 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:0097305 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

693

Amino Acids

77.3

Weight (kDa)

5.37

Isoelectric Point (pI)

37.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	85 - 228	2.5e-35	Flavodoxin
FAD_binding_1	PF00667	287 - 509	2.2e-75	FAD binding domain
NAD_binding_1	PF00175	546 - 656	2.8e-14	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005981)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24520 AT4G24520
fragaria_vesca	FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 FvH4_5g34830
malus_domestica	MD08G1199100.v1.1 MD15G1386100.v1.1
prunus_persica	Prupe.1G532800_v2.0.a1 Prupe.1G532800_v2.0.a1 Prupe.1G532800_v2.0.a1
pyrus_communis	pycom08g17290 pycom15g34630
rosa_chinensis	RchiOBHm_Chr7g0235511
rosa_laevigata	RLG00000001153
rosa_multiflora	Rmu_sc0002617.1_g000018 Rmu_sc0002892.1_g000021 Rmu_sc0039003.1_g000003 Rmu_sc0042677.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225940
rosa_rugosa	Rorug07G0291400
rosa_samantha	Rh7AG446500 Rh7BG418200 Rh7CG466500 Rh7DG435200
rosa_wichuraiana	Rw7G037070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2073
Acc36I	ACCTGC	1 cut(s)	1732
AccB1I	GGYRCC	1 cut(s)	181
AccB7I	CCANNNNNTGG	1 cut(s)	1136
AccBSI	CCGCTC	1 cut(s)	930
AccI	GTMKAC	1 cut(s)	351
AccII	CGCG	5 cut(s)	27, 29, 92, 1837, 1839
AciI	CCGC	7 cut(s)	191, 233, 746, 928, 1124, 1153, 1753
AclWI	GGATC	3 cut(s)	159, 717, 1610
AcoI	YGGCCR	2 cut(s)	429, 840
AcsI	RAATTY	4 cut(s)	10, 739, 1259, 1500
AcuI	CTGAAG	1 cut(s)	2027
AcyI	GRCGYC	2 cut(s)	1941, 2070
AdeI	CACNNNGTG	1 cut(s)	1370
AfaI	GTAC	6 cut(s)	24, 277, 1046, 1292, 1651, 1922
AfiI	CCNNNNNNNGG	7 cut(s)	1136, 1367, 1652, 1670, 1702, 1759, 1996
AflIII	ACRYGT	1 cut(s)	1893
AgeI	ACCGGT	1 cut(s)	1493
AjiI	CACGTC	1 cut(s)	1104
AjnI	CCWGG	3 cut(s)	354, 1135, 1645
AjuI	GAANNNNNNNTTGG	1 cut(s)	34
AleI	CACNNNNGTG	1 cut(s)	80
AluBI	AGCT	8 cut(s)	175, 281, 335, 764, 1037, 1116, 1569, 2027
AluI	AGCT	8 cut(s)	175, 281, 335, 764, 1037, 1116, 1569, 2027
Alw21I	GWGCWC	1 cut(s)	1714
Alw26I	GTCTC	4 cut(s)	401, 981, 1110, 2061
AlwI	GGATC	3 cut(s)	159, 717, 1610
AlwNI	CAGNNNCTG	1 cut(s)	1569
AoxI	GGCC	6 cut(s)	429, 698, 840, 1051, 1643, 1692
ApoI	RAATTY	4 cut(s)	10, 739, 1259, 1500
ArsI	GACNNNNNNTTYG	2 cut(s)	788, 820
AsiGI	ACCGGT	1 cut(s)	1493
AspLEI	GCGC	5 cut(s)	29, 43, 109, 1444, 1839
AspS9I	GGNCC	8 cut(s)	1051, 1139, 1481, 1643, 1693, 1721, 1844, 1900
AsuC2I	CCSGG	1 cut(s)	161
AsuII	TTCGAA	1 cut(s)	8
AvaII	GGWCC	5 cut(s)	1139, 1481, 1721, 1844, 1900
AxyI	CCTNAGG	1 cut(s)	1275
BaeGI	GKGCMC	1 cut(s)	186
BaeI	ACNNNNGTAYC	2 cut(s)	14, 47
BalI	TGGCCA	2 cut(s)	431, 842
BanI	GGYRCC	1 cut(s)	181
BanII	GRGCYC	1 cut(s)	1576
BarI	GAAGNNNNNNTAC	2 cut(s)	1274, 1306
Bbv12I	GWGCWC	1 cut(s)	1714
BbvCI	CCTCAGC	3 cut(s)	282, 306, 369
BccI	CCATC	9 cut(s)	437, 879, 948, 1091, 1455, 1684, 1870, 2041, 2045
BciT130I	CCWGG	3 cut(s)	356, 1137, 1647
BcnI	CCSGG	1 cut(s)	161
BcoDI	GTCTC	4 cut(s)	401, 981, 1110, 2061
BfaI	CTAG	5 cut(s)	321, 801, 1547, 1904, 1956
BfmI	CTRYAG	3 cut(s)	1383, 1679, 2028
BfoI	RGCGCY	1 cut(s)	44
BfuAI	ACCTGC	1 cut(s)	1732
BmcAI	AGTACT	2 cut(s)	1046, 1292
Bme1390I	CCNGG	4 cut(s)	161, 356, 1137, 1647
Bme18I	GGWCC	5 cut(s)	1139, 1481, 1721, 1844, 1900
BmgBI	CACGTC	1 cut(s)	1104
BmgT120I	GGNCC	8 cut(s)	1051, 1139, 1481, 1643, 1693, 1721, 1844, 1900
BmiI	GGNNCC	7 cut(s)	158, 183, 450, 1575, 1644, 1845, 1901
BmrFI	CCNGG	4 cut(s)	161, 356, 1137, 1647
BmsI	GCATC	2 cut(s)	669, 945
BpmI	CTGGAG	2 cut(s)	965, 1005
Bpu10I	CCTNAGC	5 cut(s)	282, 294, 306, 369, 640
Bpu14I	TTCGAA	1 cut(s)	8
BpuEI	CTTGAG	1 cut(s)	1896
BpuMI	CCSGG	1 cut(s)	161
BsaAI	YACGTR	1 cut(s)	1894
BsaBI	GATNNNNATC	1 cut(s)	1965
BsaHI	GRCGYC	2 cut(s)	1941, 2070
BsaI	GGTCTC	1 cut(s)	981
BsaJI	CCNNGG	4 cut(s)	1135, 1193, 1669, 1851
BsaWI	WCCGGW	1 cut(s)	1493
BsaXI	ACNNNNNCTCC	2 cut(s)	978, 1008
Bsc4I	CCNNNNNNNGG	7 cut(s)	1136, 1367, 1652, 1670, 1702, 1759, 1996
Bse118I	RCCGGY	1 cut(s)	1493
Bse1I	ACTGG	4 cut(s)	277, 655, 970, 988
Bse21I	CCTNAGG	1 cut(s)	1275
Bse8I	GATNNNNATC	1 cut(s)	1965
BseBI	CCWGG	3 cut(s)	356, 1137, 1647
BseDI	CCNNGG	4 cut(s)	1135, 1193, 1669, 1851
BseJI	GATNNNNATC	1 cut(s)	1965
BseLI	CCNNNNNNNGG	7 cut(s)	1136, 1367, 1652, 1670, 1702, 1759, 1996
BseMII	CTCAG	9 cut(s)	273, 281, 297, 360, 693, 909, 1289, 1332, 1806
BseNI	ACTGG	4 cut(s)	277, 655, 970, 988
BseRI	GAGGAG	2 cut(s)	154, 323
BseSI	GKGCMC	1 cut(s)	186
BseYI	CCCAGC	2 cut(s)	43, 1569
BsgI	GTGCAG	2 cut(s)	1206, 1710
Bsh1236I	CGCG	5 cut(s)	27, 29, 92, 1837, 1839
BshFI	GGCC	6 cut(s)	431, 700, 842, 1053, 1645, 1694
BshNI	GGYRCC	1 cut(s)	181
BshTI	ACCGGT	1 cut(s)	1493
BsiHKAI	GWGCWC	1 cut(s)	1714
BsiSI	CCGG	2 cut(s)	160, 1494
BslFI	GGGAC	3 cut(s)	1610, 1857, 1913
BslI	CCNNNNNNNGG	7 cut(s)	1136, 1367, 1652, 1670, 1702, 1759, 1996
BsmAI	GTCTC	4 cut(s)	401, 981, 1110, 2061
BsmBI	CGTCTC	2 cut(s)	1110, 2061
BsmFI	GGGAC	3 cut(s)	1610, 1857, 1913
BsmI	GAATGC	3 cut(s)	856, 1540, 1829
BsnI	GGCC	6 cut(s)	431, 700, 842, 1053, 1645, 1694
Bso31I	GGTCTC	1 cut(s)	981
Bsp119I	TTCGAA	1 cut(s)	8
Bsp1286I	GDGCHC	3 cut(s)	186, 1576, 1714
Bsp143I	GATC	7 cut(s)	87, 143, 151, 252, 709, 1177, 1615
Bsp68I	TCGCGA	1 cut(s)	92
BspACI	CCGC	7 cut(s)	191, 233, 746, 928, 1124, 1153, 1753
BspANI	GGCC	6 cut(s)	431, 700, 842, 1053, 1645, 1694
BspCNI	CTCAG	9 cut(s)	274, 280, 298, 361, 694, 910, 1288, 1333, 1807
BspFNI	CGCG	5 cut(s)	27, 29, 92, 1837, 1839
BspHI	TCATGA	2 cut(s)	793, 817
BspLI	GGNNCC	7 cut(s)	158, 183, 450, 1575, 1644, 1845, 1901
BspMAI	CTGCAG	1 cut(s)	1387
BspMI	ACCTGC	1 cut(s)	1732
BspPI	GGATC	3 cut(s)	159, 717, 1610
BspQI	GCTCTTC	1 cut(s)	1739
BspT104I	TTCGAA	1 cut(s)	8
BspT107I	GGYRCC	1 cut(s)	181
BspTNI	GGTCTC	1 cut(s)	981
BsrBI	CCGCTC	1 cut(s)	930
BsrFI	RCCGGY	1 cut(s)	1493
BsrI	ACTGG	4 cut(s)	277, 655, 970, 988
BssAI	RCCGGY	1 cut(s)	1493
BssECI	CCNNGG	4 cut(s)	1135, 1193, 1669, 1851
BssMI	GATC	7 cut(s)	87, 143, 151, 252, 709, 1177, 1615
BssNI	GRCGYC	2 cut(s)	1941, 2070
BssT1I	CCWWGG	1 cut(s)	1851
Bst2UI	CCWGG	3 cut(s)	356, 1137, 1647
Bst4CI	ACNGT	5 cut(s)	79, 1027, 1150, 1565, 2032
Bst6I	CTCTTC	2 cut(s)	201, 1739
BstACI	GRCGYC	2 cut(s)	1941, 2070
BstAPI	GCANNNNNTGC	1 cut(s)	1172
BstBAI	YACGTR	1 cut(s)	1894
BstBI	TTCGAA	1 cut(s)	8
BstC8I	GCNNGC	1 cut(s)	195
BstEII	GGTNACC	1 cut(s)	548
BstENI	CCTNNNNNAGG	2 cut(s)	1668, 1700
BstFNI	CGCG	5 cut(s)	27, 29, 92, 1837, 1839
BstH2I	RGCGCY	1 cut(s)	44
BstHHI	GCGC	5 cut(s)	29, 43, 109, 1444, 1839
BstKTI	GATC	7 cut(s)	90, 146, 154, 255, 712, 1180, 1618
BstMAI	GTCTC	4 cut(s)	401, 981, 1110, 2061
BstMBI	GATC	7 cut(s)	87, 143, 151, 252, 709, 1177, 1615
BstMWI	GCNNNNNNNGC	8 cut(s)	181, 190, 1152, 1172, 1211, 1220, 1226, 1388
BstNI	CCWGG	3 cut(s)	356, 1137, 1647
BstNSI	RCATGY	1 cut(s)	1229
BstPI	GGTNACC	1 cut(s)	548
BstSCI	CCNGG	4 cut(s)	159, 354, 1135, 1645
BstSFI	CTRYAG	3 cut(s)	1383, 1679, 2028
BstSLI	GKGCMC	1 cut(s)	186
BstUI	CGCG	5 cut(s)	27, 29, 92, 1837, 1839
BstX2I	RGATCY	1 cut(s)	709
BstXI	CCANNNNNNTGG	1 cut(s)	1951
BstYI	RGATCY	1 cut(s)	709
Bsu36I	CCTNAGG	1 cut(s)	1275
BsuRI	GGCC	6 cut(s)	431, 700, 842, 1053, 1645, 1694
BtrI	CACGTC	1 cut(s)	1104
BtsI	GCAGTG	1 cut(s)	1727
BtsIMutI	CAGTG	3 cut(s)	662, 1727, 2037
BtuMI	TCGCGA	1 cut(s)	92
BveI	ACCTGC	1 cut(s)	1732
Cac8I	GCNNGC	1 cut(s)	195
CaiI	CAGNNNCTG	1 cut(s)	1569
CciI	TCATGA	2 cut(s)	793, 817
CfoI	GCGC	5 cut(s)	29, 43, 109, 1444, 1839
Cfr10I	RCCGGY	1 cut(s)	1493
Cfr13I	GGNCC	8 cut(s)	1051, 1139, 1481, 1643, 1693, 1721, 1844, 1900
CseI	GACGC	2 cut(s)	611, 1949
Csp6I	GTAC	6 cut(s)	23, 276, 1045, 1291, 1650, 1921
CspAI	ACCGGT	1 cut(s)	1493
CviAII	CATG	6 cut(s)	794, 818, 992, 1226, 1457, 1636
CviQI	GTAC	6 cut(s)	23, 276, 1045, 1291, 1650, 1921
DpnI	GATC	7 cut(s)	89, 145, 153, 254, 711, 1179, 1617
DpnII	GATC	7 cut(s)	87, 143, 151, 252, 709, 1177, 1615
DraIII	CACNNNGTG	1 cut(s)	1370
EaeI	YGGCCR	2 cut(s)	429, 840
Eam1104I	CTCTTC	2 cut(s)	201, 1739
EarI	CTCTTC	2 cut(s)	201, 1739
Eco130I	CCWWGG	1 cut(s)	1851
Eco24I	GRGCYC	1 cut(s)	1576
Eco31I	GGTCTC	1 cut(s)	981
Eco32I	GATATC	1 cut(s)	955
Eco47I	GGWCC	5 cut(s)	1139, 1481, 1721, 1844, 1900
Eco57I	CTGAAG	1 cut(s)	2027
Eco81I	CCTNAGG	1 cut(s)	1275
Eco91I	GGTNACC	1 cut(s)	548
EcoNI	CCTNNNNNAGG	2 cut(s)	1668, 1700
EcoO109I	RGGNCCY	3 cut(s)	1643, 1721, 1900
EcoO65I	GGTNACC	1 cut(s)	548
EcoRI	GAATTC	2 cut(s)	10, 1500
EcoRII	CCWGG	3 cut(s)	354, 1135, 1645
EcoRV	GATATC	1 cut(s)	955
EcoT14I	CCWWGG	1 cut(s)	1851
EcoT38I	GRGCYC	1 cut(s)	1576
ErhI	CCWWGG	1 cut(s)	1851
Esp3I	CGTCTC	2 cut(s)	1110, 2061
FaeI	CATG	6 cut(s)	797, 821, 995, 1229, 1460, 1639
FaqI	GGGAC	3 cut(s)	1610, 1857, 1913
FatI	CATG	6 cut(s)	793, 817, 991, 1225, 1456, 1635
FauI	CCCGC	1 cut(s)	226
FauNDI	CATATG	1 cut(s)	976
FblI	GTMKAC	1 cut(s)	351
FriOI	GRGCYC	1 cut(s)	1576
FspBI	CTAG	5 cut(s)	321, 801, 1547, 1904, 1956
GlaI	GCGC	5 cut(s)	28, 42, 108, 1443, 1838
GsaI	CCCAGC	2 cut(s)	47, 1573
GsuI	CTGGAG	2 cut(s)	965, 1005
HaeII	RGCGCY	1 cut(s)	44
HaeIII	GGCC	6 cut(s)	431, 700, 842, 1053, 1645, 1694
HapII	CCGG	2 cut(s)	160, 1494
HgaI	GACGC	2 cut(s)	611, 1949
HhaI	GCGC	5 cut(s)	29, 43, 109, 1444, 1839
Hin1I	GRCGYC	2 cut(s)	1941, 2070
Hin1II	CATG	6 cut(s)	797, 821, 995, 1229, 1460, 1639
Hin6I	GCGC	5 cut(s)	27, 41, 107, 1442, 1837
HinP1I	GCGC	5 cut(s)	27, 41, 107, 1442, 1837
HincII	GTYRAC	1 cut(s)	352
HindII	GTYRAC	1 cut(s)	352
HinfI	GANTC	8 cut(s)	35, 241, 288, 689, 797, 920, 1186, 2009
HpaII	CCGG	2 cut(s)	160, 1494
Hpy166II	GTNNAC	3 cut(s)	352, 486, 2008
Hpy188III	TCNNGA	8 cut(s)	91, 773, 794, 818, 944, 960, 1525, 1547
Hpy8I	GTNNAC	3 cut(s)	352, 486, 2008
Hpy99I	CGWCG	2 cut(s)	97, 151
HpyAV	CCTTC	5 cut(s)	337, 605, 1192, 1276, 1796
HpyCH4III	ACNGT	5 cut(s)	79, 1027, 1150, 1565, 2032
HpyCH4IV	ACGT	4 cut(s)	1103, 1168, 1893, 2070
HpyF10VI	GCNNNNNNNGC	8 cut(s)	181, 190, 1152, 1172, 1211, 1220, 1226, 1388
HpySE526I	ACGT	4 cut(s)	1103, 1168, 1893, 2070
Hsp92I	GRCGYC	2 cut(s)	1941, 2070
Hsp92II	CATG	6 cut(s)	797, 821, 995, 1229, 1460, 1639
HspAI	GCGC	5 cut(s)	27, 41, 107, 1442, 1837
Kzo9I	GATC	7 cut(s)	87, 143, 151, 252, 709, 1177, 1615
LguI	GCTCTTC	1 cut(s)	1739
LmnI	GCTCC	3 cut(s)	156, 448, 1579
LweI	GCATC	2 cut(s)	669, 945
MaeI	CTAG	5 cut(s)	321, 801, 1547, 1904, 1956
MaeII	ACGT	4 cut(s)	1103, 1168, 1893, 2070
MaeIII	GTNAC	7 cut(s)	67, 247, 548, 808, 1409, 1459, 1937
MalI	GATC	7 cut(s)	89, 145, 153, 254, 711, 1179, 1617
MbiI	CCGCTC	1 cut(s)	930
MboI	GATC	7 cut(s)	87, 143, 151, 252, 709, 1177, 1615
MfeI	CAATTG	2 cut(s)	102, 1012
MflI	RGATCY	1 cut(s)	709
MhlI	GDGCHC	3 cut(s)	186, 1576, 1714
MlsI	TGGCCA	2 cut(s)	431, 842
MluNI	TGGCCA	2 cut(s)	431, 842
MlyI	GAGTC	4 cut(s)	44, 791, 929, 2003
MmeI	TCCRAC	5 cut(s)	12, 129, 687, 1288, 1508
Mox20I	TGGCCA	2 cut(s)	431, 842
MscI	TGGCCA	2 cut(s)	431, 842
MseI	TTAA	4 cut(s)	315, 885, 1257, 1820
MslI	CAYNNNNRTG	3 cut(s)	80, 996, 1894
Msp20I	TGGCCA	2 cut(s)	431, 842
MspA1I	CMGCKG	4 cut(s)	175, 233, 281, 764
MspI	CCGG	2 cut(s)	160, 1494
MspR9I	CCNGG	4 cut(s)	161, 356, 1137, 1647
MunI	CAATTG	2 cut(s)	102, 1012
Mva1269I	GAATGC	3 cut(s)	856, 1540, 1829
MvaI	CCWGG	3 cut(s)	356, 1137, 1647
MvnI	CGCG	5 cut(s)	27, 29, 92, 1837, 1839
MwoI	GCNNNNNNNGC	8 cut(s)	181, 190, 1152, 1172, 1211, 1220, 1226, 1388
NciI	CCSGG	1 cut(s)	161
NdeI	CATATG	1 cut(s)	976
NdeII	GATC	7 cut(s)	87, 143, 151, 252, 709, 1177, 1615
NlaIII	CATG	6 cut(s)	797, 821, 995, 1229, 1460, 1639
NlaIV	GGNNCC	7 cut(s)	158, 183, 450, 1575, 1644, 1845, 1901
NmuCI	GTSAC	4 cut(s)	67, 247, 1459, 1937
NruI	TCGCGA	1 cut(s)	92
NspI	RCATGY	1 cut(s)	1229
NspV	TTCGAA	1 cut(s)	8
OliI	CACNNNNGTG	1 cut(s)	80
PagI	TCATGA	2 cut(s)	793, 817
PciSI	GCTCTTC	1 cut(s)	1739
PctI	GAATGC	3 cut(s)	856, 1540, 1829
PfeI	GAWTC	4 cut(s)	241, 288, 689, 1186
PflMI	CCANNNNNTGG	1 cut(s)	1136
PinAI	ACCGGT	1 cut(s)	1493
PleI	GAGTC	4 cut(s)	43, 791, 928, 2003
PpsI	GAGTC	4 cut(s)	43, 791, 928, 2003
Ppu21I	YACGTR	1 cut(s)	1894
PpuMI	RGGWCCY	2 cut(s)	1721, 1900
Psp5II	RGGWCCY	2 cut(s)	1721, 1900
Psp6I	CCWGG	3 cut(s)	354, 1135, 1645
PspEI	GGTNACC	1 cut(s)	548
PspFI	CCCAGC	2 cut(s)	43, 1569
PspGI	CCWGG	3 cut(s)	354, 1135, 1645
PspN4I	GGNNCC	7 cut(s)	158, 183, 450, 1575, 1644, 1845, 1901
PspPI	GGNCC	8 cut(s)	1051, 1139, 1481, 1643, 1693, 1721, 1844, 1900
PspPPI	RGGWCCY	2 cut(s)	1721, 1900
PsrI	GAACNNNNNNTAC	2 cut(s)	955, 987
PstI	CTGCAG	1 cut(s)	1387
PstNI	CAGNNNCTG	1 cut(s)	1569
PsuI	RGATCY	1 cut(s)	709
PvuII	CAGCTG	3 cut(s)	175, 281, 764
RruI	TCGCGA	1 cut(s)	92
RsaI	GTAC	6 cut(s)	24, 277, 1046, 1292, 1651, 1922
RsaNI	GTAC	6 cut(s)	23, 276, 1045, 1291, 1650, 1921
RseI	CAYNNNNRTG	3 cut(s)	80, 996, 1894
SalI	GTCGAC	1 cut(s)	350
SapI	GCTCTTC	1 cut(s)	1739
SaqAI	TTAA	4 cut(s)	315, 885, 1257, 1820
Sau3AI	GATC	7 cut(s)	87, 143, 151, 252, 709, 1177, 1615
Sau96I	GGNCC	8 cut(s)	1051, 1139, 1481, 1643, 1693, 1721, 1844, 1900
ScaI	AGTACT	2 cut(s)	1046, 1292
SchI	GAGTC	4 cut(s)	44, 791, 929, 2003
ScrFI	CCNGG	4 cut(s)	161, 356, 1137, 1647
SduI	GDGCHC	3 cut(s)	186, 1576, 1714
SfaNI	GCATC	2 cut(s)	669, 945
SfcI	CTRYAG	3 cut(s)	1383, 1679, 2028
SfuI	TTCGAA	1 cut(s)	8
SinI	GGWCC	5 cut(s)	1139, 1481, 1721, 1844, 1900
SmiMI	CAYNNNNRTG	3 cut(s)	80, 996, 1894
SmlI	CTYRAG	1 cut(s)	1911
SmoI	CTYRAG	1 cut(s)	1911
SsiI	CCGC	7 cut(s)	191, 233, 746, 928, 1124, 1153, 1753
SspMI	CTAG	5 cut(s)	321, 801, 1547, 1904, 1956
StyD4I	CCNGG	4 cut(s)	159, 354, 1135, 1645
StyI	CCWWGG	1 cut(s)	1851
TaaI	ACNGT	5 cut(s)	79, 1027, 1150, 1565, 2032
TaiI	ACGT	4 cut(s)	1106, 1171, 1896, 2073
TaqI	TCGA	3 cut(s)	8, 351, 663
TatI	WGTACW	2 cut(s)	1044, 1290
TauI	GCSGC	2 cut(s)	193, 749
TfiI	GAWTC	4 cut(s)	241, 288, 689, 1186
Tru1I	TTAA	4 cut(s)	315, 885, 1257, 1820
Tru9I	TTAA	4 cut(s)	315, 885, 1257, 1820
TscAI	CASTG	3 cut(s)	662, 1734, 2037
TseFI	GTSAC	4 cut(s)	67, 247, 1459, 1937
Tsp45I	GTSAC	4 cut(s)	67, 247, 1459, 1937
TspGWI	ACGGA	2 cut(s)	86, 503
TspRI	CASTG	3 cut(s)	662, 1734, 2037
Van91I	CCANNNNNTGG	1 cut(s)	1136
VpaK11BI	GGWCC	5 cut(s)	1139, 1481, 1721, 1844, 1900
XagI	CCTNNNNNAGG	2 cut(s)	1668, 1700
XapI	RAATTY	4 cut(s)	10, 739, 1259, 1500
XbaI	TCTAGA	1 cut(s)	1546
XceI	RCATGY	1 cut(s)	1229
XmiI	GTMKAC	1 cut(s)	351
XspI	CTAG	5 cut(s)	321, 801, 1547, 1904, 1956
ZraI	GACGTC	1 cut(s)	2071
ZrmI	AGTACT	2 cut(s)	1046, 1292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.