Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0039003.1

Orthogroup ID

OG0005981

Physical Location & Seq

Genomic Coordinates Reverse (-)

11771 .. 17188

Gene Structure 5418 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0039003.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ttggctgaagagatcaaggcaagatatgagaaagctgtagtcaaggttattgacctggatgattatgctccggaggatgataaatatggagaaaaactgaagaaagagactgtggcattttttatgttggccacttatggagatggagagccaactgataatgcagcaagattttacaaatggtttactgagggaacagatcggggtgtgtggctggaacaactaagatatggtgtttttggtctgggtaaccggcagtacgaacattttaataagatagggaaagtggttgacgaattacttaatgaacaaggtgcaaagcgtcttgttactgttggcttaggtgatgatgatcaatgcattgaggatgatttttctgcttggagggaagcactgtggcccgagctagatcaattactccaagatgatacaaataatgtgtctaccccatatacagctgtgattcctgaatatagagttgttattcatgatcccagtattacctcttatgaggatcattactcgaatatggcaaacgggaatgcttcttttgacattcatcatccttgcagagttaatgttgctgttcagaaagagcttcataagcctgcgtccgatcggtcttgcatacatctggaatttgacatccatgcaacgggtatcacatatgaaaccggagaccacgtgggtgtttatgcagataattgtgatgacacagttgaagaagctgcaaagttgttgggtcaacctttagatttgctgttctccattcataccgacaataatgatggcacatcacttggaagctcattgccgcctccttttcctggtccttgcacactcaaaacagcattggcacgttatgctgatctattgaacccacctaggaaggctgctctaattgctttggctgcacatgcagttgaacctagtgaggcagaaagactcaagttcttatcatcacctcaggggaaggatgagtactcaaaatgggttgttggaagtcagagaagtcttctagaggtgatggctgaattcccatcagcaaagcctccactaggcgtgttttttgctgcagttgcccctcgcttgcagcctcgttactattcaatttcgtcatcaccgaggtttgccccacatcgtgttcatgtgacctgtgctttggtttatggtccaactccgactggcagaattcacaaaggagtgtcttcattctggatgaagaatgcagttcctctagagaaaagccagaactgtagctgggctcctatttttattaggcaatctaatttcaagttacctgctgaccattcagtcccaattgtcatggtggggcctggtacaggcttagcacctttccgaggatttctacaggaaagattagccctcaaagaggaaggtgctcaacttggtcctgcatttctcttctttggttgtagaaatcgacaaatggatttcatttatgaagatgagttgaataattttgtgcaacaaggtgcactatcagagttaatcgttgcattctcacgggagggaccatcaaaggagtatgttcaacataagatgatggagaaagcagcgtacatgtggaacctaatatcgcaagggggatacttctacgtatgtggtgatgccaagggtatggcgagagatgttcatcggacgttgcataccattgtccagcaagaggaaaaagtagactcgtcaaaggcagagtctatagtgaaaaaactccagatggatggacgatacctcagggatgtctggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0003958 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006725 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009698 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0012505 GO:0016491 GO:0016651 GO:0016653 GO:0019748 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:0097305 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

589

Amino Acids

66.07

Weight (kDa)

5.51

Isoelectric Point (pI)

36.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005981)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24520 AT4G24520
fragaria_vesca	FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 FvH4_5g34830
malus_domestica	MD08G1199100.v1.1 MD15G1386100.v1.1
prunus_persica	Prupe.1G532800_v2.0.a1 Prupe.1G532800_v2.0.a1 Prupe.1G532800_v2.0.a1
pyrus_communis	pycom08g17290 pycom15g34630
rosa_chinensis	RchiOBHm_Chr7g0235511
rosa_laevigata	RLG00000001153
rosa_multiflora	Rmu_sc0002617.1_g000018 Rmu_sc0002892.1_g000021 Rmu_sc0039003.1_g000003 Rmu_sc0042677.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225940
rosa_rugosa	Rorug07G0291400
rosa_samantha	Rh7AG446500 Rh7BG418200 Rh7CG466500 Rh7DG435200
rosa_wichuraiana	Rw7G037070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1313
Acc36I	ACCTGC	1 cut(s)	1309
AccI	GTMKAC	2 cut(s)	443, 1698
AccIII	TCCGGA	1 cut(s)	70
AciI	CCGC	1 cut(s)	815
AclWI	GGATC	2 cut(s)	485, 522
AcoI	YGGCCR	1 cut(s)	129
AcsI	RAATTY	3 cut(s)	638, 1034, 1191
AcuI	CTGAAG	2 cut(s)	27, 119
AcvI	CACGTG	1 cut(s)	685
AdeI	CACNNNGTG	1 cut(s)	1142
AfaI	GTAC	4 cut(s)	260, 983, 1342, 1583
AfiI	CCNNNNNNNGG	7 cut(s)	655, 827, 1058, 1343, 1361, 1393, 1687
AflIII	ACRYGT	1 cut(s)	1584
AgsI	TTSAA	7 cut(s)	722, 877, 926, 1110, 1294, 1477, 1556
AjnI	CCWGG	3 cut(s)	54, 826, 1336
AleI	CACNNNNGTG	1 cut(s)	687
AluBI	AGCT	7 cut(s)	35, 406, 458, 598, 728, 807, 1260
AluI	AGCT	7 cut(s)	35, 406, 458, 598, 728, 807, 1260
Alw21I	GWGCWC	2 cut(s)	1405, 1501
Alw26I	GTCTC	2 cut(s)	101, 672
Alw44I	GTGCAC	1 cut(s)	1497
AlwI	GGATC	2 cut(s)	485, 522
Ama87I	CYCGRG	1 cut(s)	401
Aor13HI	TCCGGA	1 cut(s)	70
AoxI	GGCC	3 cut(s)	129, 398, 1334
ApaLI	GTGCAC	1 cut(s)	1497
ApeKI	GCWGC	7 cut(s)	164, 728, 893, 911, 1073, 1093, 1577
ApoI	RAATTY	3 cut(s)	638, 1034, 1191
ArsI	GACNNNNNNTTYG	6 cut(s)	425, 457, 1144, 1176, 1700, 1732
AspA2I	CCTAGG	1 cut(s)	884
AspS9I	GGNCC	6 cut(s)	399, 830, 1172, 1334, 1412, 1535
AsuHPI	GGTGA	5 cut(s)	356, 954, 1036, 1113, 1640
AvaI	CYCGRG	1 cut(s)	401
AvaII	GGWCC	4 cut(s)	830, 1172, 1412, 1535
AvrII	CCTAGG	1 cut(s)	884
AxyI	CCTNAGG	2 cut(s)	966, 1754
BaeGI	GKGCMC	1 cut(s)	1501
BalI	TGGCCA	1 cut(s)	131
BanII	GRGCYC	1 cut(s)	1267
BarI	GAAGNNNNNNTAC	2 cut(s)	965, 997
BbrPI	CACGTG	1 cut(s)	685
BbsI	GAAGAC	2 cut(s)	1007, 1200
Bbv12I	GWGCWC	2 cut(s)	1405, 1501
BbvI	GCAGC	7 cut(s)	176, 715, 880, 898, 1060, 1105, 1589
BccI	CCATC	8 cut(s)	137, 782, 1021, 1048, 1546, 1561, 1732, 1736
BciT130I	CCWGG	3 cut(s)	56, 828, 1338
BciVI	GTATCC	1 cut(s)	1604
BclI	TGATCA	1 cut(s)	352
BcoDI	GTCTC	2 cut(s)	101, 672
BfaI	CTAG	6 cut(s)	407, 885, 930, 1019, 1058, 1238
BfmI	CTRYAG	5 cut(s)	36, 1074, 1255, 1370, 1719
BfuAI	ACCTGC	1 cut(s)	1309
BfuI	GTATCC	1 cut(s)	1604
BisI	GCNGC	8 cut(s)	165, 729, 815, 894, 912, 1074, 1094, 1578
BlnI	CCTAGG	1 cut(s)	884
BlpI	GCTNAGC	1 cut(s)	1348
BlsI	GCNGC	8 cut(s)	166, 730, 816, 895, 913, 1075, 1095, 1579
BmcAI	AGTACT	1 cut(s)	983
Bme1390I	CCNGG	3 cut(s)	56, 828, 1338
Bme18I	GGWCC	4 cut(s)	830, 1172, 1412, 1535
BmeT110I	CYCGRG	1 cut(s)	401
BmgT120I	GGNCC	6 cut(s)	399, 830, 1172, 1334, 1412, 1535
BmiI	GGNNCC	4 cut(s)	1266, 1335, 1536, 1592
BmrFI	CCNGG	3 cut(s)	56, 828, 1338
BmrI	ACTGGG	1 cut(s)	489
BmsI	GCATC	1 cut(s)	1621
BmuI	ACTGGG	1 cut(s)	489
BpiI	GAAGAC	2 cut(s)	1007, 1200
BpmI	CTGGAG	1 cut(s)	1718
Bpu10I	CCTNAGC	1 cut(s)	340
Bpu1102I	GCTNAGC	1 cut(s)	1348
BpuEI	CTTGAG	1 cut(s)	932
BsaAI	YACGTR	2 cut(s)	685, 1621
BsaBI	GATNNNNATC	2 cut(s)	351, 1656
BsaI	GGTCTC	1 cut(s)	672
BsaJI	CCNNGG	4 cut(s)	884, 1124, 1360, 1635
BsaWI	WCCGGW	2 cut(s)	70, 674
BsaXI	ACNNNNNCTCC	2 cut(s)	669, 699
Bsc4I	CCNNNNNNNGG	7 cut(s)	655, 827, 1058, 1343, 1361, 1393, 1687
Bse118I	RCCGGY	1 cut(s)	252
Bse1I	ACTGG	2 cut(s)	495, 1189
Bse21I	CCTNAGG	2 cut(s)	966, 1754
Bse3DI	GCAATG	1 cut(s)	809
Bse8I	GATNNNNATC	2 cut(s)	351, 1656
BseAI	TCCGGA	1 cut(s)	70
BseBI	CCWGG	3 cut(s)	56, 828, 1338
BseDI	CCNNGG	4 cut(s)	884, 1124, 1360, 1635
BseGI	GGATG	9 cut(s)	64, 82, 373, 562, 645, 982, 1224, 1747, 1765
BseJI	GATNNNNATC	2 cut(s)	351, 1656
BseLI	CCNNNNNNNGG	7 cut(s)	655, 827, 1058, 1343, 1361, 1393, 1687
BseMI	GCAATG	1 cut(s)	809
BseMII	CTCAG	3 cut(s)	180, 980, 1768
BseNI	ACTGG	2 cut(s)	495, 1189
BseSI	GKGCMC	1 cut(s)	1501
BseXI	GCAGC	7 cut(s)	176, 715, 880, 898, 1060, 1105, 1589
BseYI	CCCAGC	1 cut(s)	1260
BsgI	GTGCAG	1 cut(s)	897
Bsh1285I	CGRYCG	1 cut(s)	619
BshFI	GGCC	3 cut(s)	131, 400, 1336
BsiEI	CGRYCG	1 cut(s)	619
BsiHKAI	GWGCWC	2 cut(s)	1405, 1501
BsiHKCI	CYCGRG	1 cut(s)	401
BsiSI	CCGG	3 cut(s)	71, 253, 675
BslFI	GGGAC	2 cut(s)	1301, 1548
BslI	CCNNNNNNNGG	7 cut(s)	655, 827, 1058, 1343, 1361, 1393, 1687
BsmAI	GTCTC	2 cut(s)	101, 672
BsmFI	GGGAC	2 cut(s)	1301, 1548
BsmI	GAATGC	3 cut(s)	547, 1231, 1520
BsnI	GGCC	3 cut(s)	131, 400, 1336
Bso31I	GGTCTC	1 cut(s)	672
BsoBI	CYCGRG	1 cut(s)	401
Bsp1286I	GDGCHC	3 cut(s)	1267, 1405, 1501
Bsp13I	TCCGGA	1 cut(s)	70
Bsp143I	GATC	8 cut(s)	12, 199, 352, 409, 490, 514, 616, 868
Bsp1720I	GCTNAGC	1 cut(s)	1348
BspACI	CCGC	1 cut(s)	815
BspANI	GGCC	3 cut(s)	131, 400, 1336
BspCNI	CTCAG	3 cut(s)	181, 979, 1767
BspEI	TCCGGA	1 cut(s)	70
BspHI	TCATGA	1 cut(s)	487
BspLI	GGNNCC	4 cut(s)	1266, 1335, 1536, 1592
BspMAI	CTGCAG	1 cut(s)	1078
BspMI	ACCTGC	1 cut(s)	1309
BspPI	GGATC	2 cut(s)	485, 522
BspTNI	GGTCTC	1 cut(s)	672
BsrDI	GCAATG	1 cut(s)	809
BsrFI	RCCGGY	1 cut(s)	252
BsrI	ACTGG	2 cut(s)	495, 1189
BssAI	RCCGGY	1 cut(s)	252
BssECI	CCNNGG	4 cut(s)	884, 1124, 1360, 1635
BssMI	GATC	8 cut(s)	12, 199, 352, 409, 490, 514, 616, 868
BssT1I	CCWWGG	2 cut(s)	884, 1635
Bst2UI	CCWGG	3 cut(s)	56, 828, 1338
Bst4CI	ACNGT	5 cut(s)	112, 334, 396, 718, 1256
Bst6I	CTCTTC	2 cut(s)	3, 1430
BstAPI	GCANNNNNTGC	1 cut(s)	863
BstBAI	YACGTR	2 cut(s)	685, 1621
BstC8I	GCNNGC	2 cut(s)	609, 1091
BstDEI	CTNAG	6 cut(s)	189, 224, 340, 966, 1348, 1754
BstEII	GGTNACC	1 cut(s)	248
BstENI	CCTNNNNNAGG	4 cut(s)	1056, 1341, 1359, 1391
BstF5I	GGATG	9 cut(s)	64, 82, 373, 562, 645, 982, 1224, 1747, 1765
BstKTI	GATC	8 cut(s)	15, 202, 355, 412, 493, 517, 619, 871
BstMAI	GTCTC	2 cut(s)	101, 672
BstMBI	GATC	8 cut(s)	12, 199, 352, 409, 490, 514, 616, 868
BstMCI	CGRYCG	1 cut(s)	619
BstMWI	GCNNNNNNNGC	6 cut(s)	604, 863, 902, 911, 917, 1079
BstNI	CCWGG	3 cut(s)	56, 828, 1338
BstNSI	RCATGY	2 cut(s)	920, 1588
BstPI	GGTNACC	1 cut(s)	248
BstSCI	CCNGG	3 cut(s)	54, 826, 1336
BstSFI	CTRYAG	5 cut(s)	36, 1074, 1255, 1370, 1719
BstSLI	GKGCMC	1 cut(s)	1501
BstSNI	TACGTA	1 cut(s)	1621
BstV1I	GCAGC	7 cut(s)	176, 715, 880, 898, 1060, 1105, 1589
BstV2I	GAAGAC	2 cut(s)	1007, 1200
BstXI	CCANNNNNNTGG	2 cut(s)	1642, 1742
Bsu36I	CCTNAGG	2 cut(s)	966, 1754
BsuI	GTATCC	1 cut(s)	1604
BsuRI	GGCC	3 cut(s)	131, 400, 1336
BtsCI	GGATG	9 cut(s)	64, 82, 373, 562, 645, 982, 1224, 1747, 1765
BtsIMutI	CAGTG	1 cut(s)	392
BveI	ACCTGC	1 cut(s)	1309
Cac8I	GCNNGC	2 cut(s)	609, 1091
CciI	TCATGA	1 cut(s)	487
Cfr10I	RCCGGY	1 cut(s)	252
Cfr13I	GGNCC	6 cut(s)	399, 830, 1172, 1334, 1412, 1535
CseI	GACGC	2 cut(s)	311, 600
Csp6I	GTAC	4 cut(s)	259, 982, 1341, 1582
CviAII	CATG	6 cut(s)	488, 650, 917, 1148, 1327, 1585
CviQI	GTAC	4 cut(s)	259, 982, 1341, 1582
DdeI	CTNAG	6 cut(s)	189, 224, 340, 966, 1348, 1754
DpnI	GATC	8 cut(s)	14, 201, 354, 411, 492, 516, 618, 870
DpnII	GATC	8 cut(s)	12, 199, 352, 409, 490, 514, 616, 868
DraIII	CACNNNGTG	1 cut(s)	1142
DrdI	GACNNNNNNGTC	1 cut(s)	1313
DseDI	GACNNNNNNGTC	1 cut(s)	1313
EaeI	YGGCCR	1 cut(s)	129
Eam1104I	CTCTTC	2 cut(s)	3, 1430
EarI	CTCTTC	2 cut(s)	3, 1430
Eco105I	TACGTA	1 cut(s)	1621
Eco130I	CCWWGG	2 cut(s)	884, 1635
Eco24I	GRGCYC	1 cut(s)	1267
Eco31I	GGTCTC	1 cut(s)	672
Eco47I	GGWCC	4 cut(s)	830, 1172, 1412, 1535
Eco57I	CTGAAG	2 cut(s)	27, 119
Eco72I	CACGTG	1 cut(s)	685
Eco81I	CCTNAGG	2 cut(s)	966, 1754
Eco88I	CYCGRG	1 cut(s)	401
Eco91I	GGTNACC	1 cut(s)	248
EcoNI	CCTNNNNNAGG	4 cut(s)	1056, 1341, 1359, 1391
EcoO109I	RGGNCCY	1 cut(s)	1334
EcoO65I	GGTNACC	1 cut(s)	248
EcoRI	GAATTC	2 cut(s)	1034, 1191
EcoRII	CCWGG	3 cut(s)	54, 826, 1336
EcoT14I	CCWWGG	2 cut(s)	884, 1635
EcoT22I	ATGCAT	1 cut(s)	362
EcoT38I	GRGCYC	1 cut(s)	1267
ErhI	CCWWGG	2 cut(s)	884, 1635
FaeI	CATG	6 cut(s)	491, 653, 920, 1151, 1330, 1588
FaqI	GGGAC	2 cut(s)	1301, 1548
FatI	CATG	6 cut(s)	487, 649, 916, 1147, 1326, 1584
FauNDI	CATATG	1 cut(s)	667
FbaI	TGATCA	1 cut(s)	352
FblI	GTMKAC	2 cut(s)	443, 1698
Fnu4HI	GCNGC	8 cut(s)	165, 729, 815, 894, 912, 1074, 1094, 1578
FokI	GGATG	8 cut(s)	71, 89, 380, 549, 632, 989, 1231, 1754
FriOI	GRGCYC	1 cut(s)	1267
Fsp4HI	GCNGC	8 cut(s)	165, 729, 815, 894, 912, 1074, 1094, 1578
FspBI	CTAG	6 cut(s)	407, 885, 930, 1019, 1058, 1238
GluI	GCNGC	8 cut(s)	165, 729, 815, 894, 912, 1074, 1094, 1578
GsaI	CCCAGC	1 cut(s)	1264
GsuI	CTGGAG	1 cut(s)	1718
HaeIII	GGCC	3 cut(s)	131, 400, 1336
HapII	CCGG	3 cut(s)	71, 253, 675
HgaI	GACGC	2 cut(s)	311, 600
Hin1II	CATG	6 cut(s)	491, 653, 920, 1151, 1330, 1588
HincII	GTYRAC	2 cut(s)	292, 746
HindII	GTYRAC	2 cut(s)	292, 746
HinfI	GANTC	4 cut(s)	463, 945, 1700, 1715
HpaII	CCGG	3 cut(s)	71, 253, 675
HphI	GGTGA	5 cut(s)	356, 954, 1036, 1113, 1640
Hpy166II	GTNNAC	6 cut(s)	186, 292, 444, 746, 1499, 1699
Hpy188I	TCNGA	7 cut(s)	591, 616, 1008, 1182, 1361, 1507, 1662
Hpy188III	TCNNGA	8 cut(s)	71, 467, 488, 635, 1019, 1216, 1238, 1735
Hpy8I	GTNNAC	6 cut(s)	186, 292, 444, 746, 1499, 1699
HpyAV	CCTTC	3 cut(s)	883, 967, 1391
HpyCH4III	ACNGT	5 cut(s)	112, 334, 396, 718, 1256
HpyCH4IV	ACGT	4 cut(s)	684, 859, 1620, 1664
HpyF10VI	GCNNNNNNNGC	6 cut(s)	604, 863, 902, 911, 917, 1079
HpyF3I	CTNAG	6 cut(s)	189, 224, 340, 966, 1348, 1754
HpySE526I	ACGT	4 cut(s)	684, 859, 1620, 1664
Hsp92II	CATG	6 cut(s)	491, 653, 920, 1151, 1330, 1588
Kpn2I	TCCGGA	1 cut(s)	70
Ksp22I	TGATCA	1 cut(s)	352
Kzo9I	GATC	8 cut(s)	12, 199, 352, 409, 490, 514, 616, 868
LmnI	GCTCC	2 cut(s)	73, 1270
Lsp1109I	GCAGC	7 cut(s)	176, 715, 880, 898, 1060, 1105, 1589
LweI	GCATC	1 cut(s)	1621
MaeI	CTAG	6 cut(s)	407, 885, 930, 1019, 1058, 1238
MaeII	ACGT	4 cut(s)	684, 859, 1620, 1664
MaeIII	GTNAC	5 cut(s)	248, 328, 1100, 1150, 1296
MalI	GATC	8 cut(s)	14, 201, 354, 411, 492, 516, 618, 870
MboI	GATC	8 cut(s)	12, 199, 352, 409, 490, 514, 616, 868
MboII	GAAGA	8 cut(s)	20, 112, 734, 1007, 1200, 1234, 1417, 1478
MfeI	CAATTG	1 cut(s)	1320
MhlI	GDGCHC	3 cut(s)	1267, 1405, 1501
MlsI	TGGCCA	1 cut(s)	131
MluNI	TGGCCA	1 cut(s)	131
MlyI	GAGTC	3 cut(s)	939, 1694, 1724
MmeI	TCCRAC	3 cut(s)	979, 1199, 1205
Mox20I	TGGCCA	1 cut(s)	131
Mph1103I	ATGCAT	1 cut(s)	362
MroI	TCCGGA	1 cut(s)	70
MscI	TGGCCA	1 cut(s)	131
MseI	TTAA	4 cut(s)	270, 303, 576, 1511
MslI	CAYNNNNRTG	1 cut(s)	687
Msp20I	TGGCCA	1 cut(s)	131
MspA1I	CMGCKG	1 cut(s)	458
MspI	CCGG	3 cut(s)	71, 253, 675
MspR9I	CCNGG	3 cut(s)	56, 828, 1338
MunI	CAATTG	1 cut(s)	1320
Mva1269I	GAATGC	3 cut(s)	547, 1231, 1520
MvaI	CCWGG	3 cut(s)	56, 828, 1338
MwoI	GCNNNNNNNGC	6 cut(s)	604, 863, 902, 911, 917, 1079
NdeI	CATATG	1 cut(s)	667
NdeII	GATC	8 cut(s)	12, 199, 352, 409, 490, 514, 616, 868
NlaIII	CATG	6 cut(s)	491, 653, 920, 1151, 1330, 1588
NlaIV	GGNNCC	4 cut(s)	1266, 1335, 1536, 1592
NmuCI	GTSAC	1 cut(s)	1150
NsiI	ATGCAT	1 cut(s)	362
NspI	RCATGY	2 cut(s)	920, 1588
OliI	CACNNNNGTG	1 cut(s)	687
PagI	TCATGA	1 cut(s)	487
PciI	ACATGT	1 cut(s)	1584
PcsI	WCGNNNNNNNCGW	1 cut(s)	1121
PctI	GAATGC	3 cut(s)	547, 1231, 1520
PfeI	GAWTC	1 cut(s)	463
PkrI	GCNGC	8 cut(s)	166, 730, 816, 895, 913, 1075, 1095, 1579
Ple19I	CGATCG	1 cut(s)	619
PleI	GAGTC	3 cut(s)	939, 1694, 1723
PmaCI	CACGTG	1 cut(s)	685
PmlI	CACGTG	1 cut(s)	685
PpsI	GAGTC	3 cut(s)	939, 1694, 1723
Ppu21I	YACGTR	2 cut(s)	685, 1621
PscI	ACATGT	1 cut(s)	1584
Psp6I	CCWGG	3 cut(s)	54, 826, 1336
PspCI	CACGTG	1 cut(s)	685
PspEI	GGTNACC	1 cut(s)	248
PspFI	CCCAGC	1 cut(s)	1260
PspGI	CCWGG	3 cut(s)	54, 826, 1336
PspN4I	GGNNCC	4 cut(s)	1266, 1335, 1536, 1592
PspPI	GGNCC	6 cut(s)	399, 830, 1172, 1334, 1412, 1535
PstI	CTGCAG	1 cut(s)	1078
PvuI	CGATCG	1 cut(s)	619
PvuII	CAGCTG	1 cut(s)	458
RsaI	GTAC	4 cut(s)	260, 983, 1342, 1583
RsaNI	GTAC	4 cut(s)	259, 982, 1341, 1582
RseI	CAYNNNNRTG	1 cut(s)	687
SaqAI	TTAA	4 cut(s)	270, 303, 576, 1511
SatI	GCNGC	8 cut(s)	165, 729, 815, 894, 912, 1074, 1094, 1578
Sau3AI	GATC	8 cut(s)	12, 199, 352, 409, 490, 514, 616, 868
Sau96I	GGNCC	6 cut(s)	399, 830, 1172, 1334, 1412, 1535
ScaI	AGTACT	1 cut(s)	983
SchI	GAGTC	3 cut(s)	939, 1694, 1724
ScrFI	CCNGG	3 cut(s)	56, 828, 1338
SduI	GDGCHC	3 cut(s)	1267, 1405, 1501
SfaNI	GCATC	1 cut(s)	1621
SfcI	CTRYAG	5 cut(s)	36, 1074, 1255, 1370, 1719
SinI	GGWCC	4 cut(s)	830, 1172, 1412, 1535
SmiMI	CAYNNNNRTG	1 cut(s)	687
SmlI	CTYRAG	1 cut(s)	947
SmoI	CTYRAG	1 cut(s)	947
SnaBI	TACGTA	1 cut(s)	1621
SsiI	CCGC	1 cut(s)	815
SspMI	CTAG	6 cut(s)	407, 885, 930, 1019, 1058, 1238
StyD4I	CCNGG	3 cut(s)	54, 826, 1336
StyI	CCWWGG	2 cut(s)	884, 1635
TaaI	ACNGT	5 cut(s)	112, 334, 396, 718, 1256
TaiI	ACGT	4 cut(s)	687, 862, 1623, 1667
TaqI	TCGA	2 cut(s)	524, 1444
TaqII	GACCGA	1 cut(s)	609
TatI	WGTACW	1 cut(s)	981
TauI	GCSGC	1 cut(s)	817
TfiI	GAWTC	1 cut(s)	463
Tru1I	TTAA	4 cut(s)	270, 303, 576, 1511
Tru9I	TTAA	4 cut(s)	270, 303, 576, 1511
TscAI	CASTG	1 cut(s)	399
TseFI	GTSAC	1 cut(s)	1150
TseI	GCWGC	7 cut(s)	164, 728, 893, 911, 1073, 1093, 1577
Tsp45I	GTSAC	1 cut(s)	1150
TspRI	CASTG	1 cut(s)	399
VneI	GTGCAC	1 cut(s)	1497
VpaK11BI	GGWCC	4 cut(s)	830, 1172, 1412, 1535
XagI	CCTNNNNNAGG	4 cut(s)	1056, 1341, 1359, 1391
XapI	RAATTY	3 cut(s)	638, 1034, 1191
XbaI	TCTAGA	2 cut(s)	1018, 1237
XceI	RCATGY	2 cut(s)	920, 1588
XmaJI	CCTAGG	1 cut(s)	884
XmiI	GTMKAC	2 cut(s)	443, 1698
XspI	CTAG	6 cut(s)	407, 885, 930, 1019, 1058, 1238
ZrmI	AGTACT	1 cut(s)	983
Zsp2I	ATGCAT	1 cut(s)	362

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.