FvH4_5g34870

M-phase-specific PLK1-interacting protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
25519416 .. 25522305
2890 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g34870.t1

Sequence Viewer

Length: 1278 bp
ATGGAGACTTCGGAGAAGAGAAAGGAACGGCTAAGAGCAATGCGGCTAGAAGCTGAAGCTTCTCATAATGATACGACTGCAGATGTACCGGGATACCTTTCTAATCCGCTGGCTGATGGTAATGTGGCACAGGAGGAGCCCTGTGCTCCTTCTAGGTTTGGATTTTATACAGACCCTATGGCGGGTTTCTCTGCAGATACTAAGCGGTGTAAAACTGGTGATCATTTTGCATCGAATAGTTTCAAGCATTCAGATGCTGGTGGTCTTCCTGTGCCAAGGCTTCCTCCACCTCTTTCAGGAAGACCAATGAACCCTGAAATGCCTCCTCCACCTCATCTGTTTCAGAGCAATTACTCACCAGACCAGAGAATGTACCAACAAAACTTTGCTCCTCAAAGAAGTCCAGCAGCAATGGTGAGACCTTTTGCAATGCATCATGGAAATCTACCTGAACTCTGGACTGGAGCTGAATGTCCGGCAAGTTATAATTTCTCTTCTGATCCCTCAATAGAAAGCAGGTCTACTGGACCGAGATTTAGACCACCTGGTAGCCCCGGATATAGACCACCAGGAAGCCCGGGATTTGGGCCATCAGGAAGCCCAGGATTTGGGCCATCAGGAAGCCCCGGGTTTGGGCTACCAGGAAGCCCGGGATTCGGGCCACCAGGAGTCCCAGGATACGGGCCACCAAGAAACCCGGGATTCAGGCCGCTGGGAAATCCAGGATTTGGACCACCAGGAAGCGCGGGATTTGGACCATCAGGAAGCCCCGGATTTAGGCCACCAGGAAGCCCGGGATATAGGCCACCTGGAAGCCCCGGATATAGGTCACCTGGAAGCCCTGGATTTAATTCCAATACTCGGCAAGGTAGGGGGAACTGGGCCGGTCATAGTCCAAGCCCTCATTCAGTACATGGAGGTAGTCATAATCCTAGTTCAAGTTCAGGTAGAGGTAGGGGACATCCTGGTTCAGAAGGGAGAGGCGGACACGGGCGGGGTTCGCATGATCGTCCATTTCACCCAGAACAATTTTACAATGCTTCCATGGTTGAAGATCCATGGAAAGGTGTGTCACCTGTTACATGGCAAGCTTTGACACCTGTTTTCTGGAAGAAGGTAGATACTCCCTTCAATGGTAACAAAAATAAAGCAAGCATTCCAGAAAGTTCAAACAGGTCCACTCCACAGCCAAACTTGGCAGAGTACTTGGCTGCCTCACTGAATGAAACGATTAATGAGGAACCAAATGAAACTGTTAATGAGGAACCGACTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

426

Amino Acids

44.99

Weight (kDa)

8.93

Isoelectric Point (pI)

63.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014057)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24500 AT4G24500 AT4G24500
fragaria_vesca FvH4_5g34870
malus_domestica MD08G1199700.v1.1
prunus_persica Prupe.1G533200_v2.0.a1
pyrus_communis pycom08g17330 pycom15g34700
rosa_chinensis RchiOBHm_Chr7g0235791
rosa_laevigata RLG00000001139
rosa_roxburghii Rroxscaffold_3G00225630
rosa_rugosa Rorug07G0292800
rosa_samantha Rh7AG447700 Rh7BG419900 Rh7CG468200 Rh7DG436700
rosa_wichuraiana Rw7G037200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 486
Acc36I ACCTGC 1 cut(s) 507
AccB7I CCANNNNNTGG 2 cut(s) 608, 728
AccI GTMKAC 1 cut(s) 521
AccII CGCG 1 cut(s) 746
AciI CCGC 8 cut(s) 43, 107, 182, 205, 710, 746, 984, 994
AclWI GGATC 2 cut(s) 494, 1049
AcuI CTGAAG 1 cut(s) 75
AfaI GTAC 4 cut(s) 87, 374, 912, 1205
AgsI TTSAA 5 cut(s) 244, 939, 1052, 1132, 1170
AjuI GAANNNNNNNTTGG 2 cut(s) 889, 921
AluBI AGCT 4 cut(s) 53, 59, 467, 1091
AluI AGCT 4 cut(s) 53, 59, 467, 1091
Alw21I GWGCWC 1 cut(s) 148
Alw26I GTCTC 1 cut(s) 412
AlwI GGATC 2 cut(s) 494, 1049
AlwNI CAGNNNCTG 1 cut(s) 257
Ama87I CYCGRG 5 cut(s) 577, 626, 649, 697, 793
AoxI GGCC 8 cut(s) 587, 611, 659, 683, 707, 779, 803, 882
ApeKI GCWGC 2 cut(s) 407, 1211
AseI ATTAAT 1 cut(s) 1233
Asp700I GAANNNNTTC 1 cut(s) 239
AspLEI GCGC 1 cut(s) 746
AspS9I GGNCC 9 cut(s) 527, 587, 611, 659, 683, 731, 755, 882, 1176
AsuHPI GGTGA 6 cut(s) 230, 348, 427, 822, 1010, 1065
AvaI CYCGRG 5 cut(s) 577, 626, 649, 697, 793
AvaII GGWCC 4 cut(s) 527, 731, 755, 1176
BanII GRGCYC 1 cut(s) 141
BbsI GAAGAC 2 cut(s) 257, 307
Bbv12I GWGCWC 1 cut(s) 148
BbvI GCAGC 2 cut(s) 419, 1198
BccI CCATC 4 cut(s) 110, 598, 622, 766
BceAI ACGGC 1 cut(s) 44
BciVI GTATCC 2 cut(s) 86, 671
BclI TGATCA 1 cut(s) 220
BcoDI GTCTC 1 cut(s) 412
BfaI CTAG 3 cut(s) 47, 153, 933
BfmI CTRYAG 2 cut(s) 78, 192
BfuAI ACCTGC 1 cut(s) 507
BfuI GTATCC 2 cut(s) 86, 671
BisI GCNGC 4 cut(s) 44, 408, 710, 1212
BlsI GCNGC 4 cut(s) 45, 409, 711, 1213
BmcAI AGTACT 1 cut(s) 1205
Bme18I GGWCC 4 cut(s) 527, 731, 755, 1176
BmeT110I CYCGRG 5 cut(s) 577, 626, 649, 697, 793
BmgT120I GGNCC 9 cut(s) 527, 587, 611, 659, 683, 731, 755, 882, 1176
BmiI GGNNCC 3 cut(s) 138, 1242, 1266
BmrI ACTGGG 1 cut(s) 889
BmsI GCATC 3 cut(s) 239, 244, 442
BmuI ACTGGG 1 cut(s) 889
BpiI GAAGAC 2 cut(s) 257, 307
BpmI CTGGAG 1 cut(s) 483
BsaI GGTCTC 1 cut(s) 412
Bse118I RCCGGY 1 cut(s) 884
Bse1I ACTGG 4 cut(s) 220, 466, 529, 884
Bse3DI GCAATG 3 cut(s) 45, 417, 435
BseGI GGATG 1 cut(s) 961
BseMI GCAATG 3 cut(s) 45, 417, 435
BseNI ACTGG 4 cut(s) 220, 466, 529, 884
BseRI GAGGAG 3 cut(s) 149, 315, 381
BseXI GCAGC 2 cut(s) 419, 1198
BseYI CCCAGC 1 cut(s) 712
Bsh1236I CGCG 1 cut(s) 746
BshFI GGCC 8 cut(s) 589, 613, 661, 685, 709, 781, 805, 884
BsiHKAI GWGCWC 1 cut(s) 148
BsiHKCI CYCGRG 5 cut(s) 577, 626, 649, 697, 793
BslFI GGGAC 2 cut(s) 656, 972
BsmAI GTCTC 1 cut(s) 412
BsmFI GGGAC 2 cut(s) 656, 972
BsmI GAATGC 2 cut(s) 247, 1155
BsnI GGCC 8 cut(s) 589, 613, 661, 685, 709, 781, 805, 884
Bso31I GGTCTC 1 cut(s) 412
BsoBI CYCGRG 5 cut(s) 577, 626, 649, 697, 793
Bsp1286I GDGCHC 2 cut(s) 141, 148
Bsp143I GATC 4 cut(s) 220, 499, 1006, 1054
Bsp19I CCATGG 2 cut(s) 1044, 1058
BspACI CCGC 8 cut(s) 43, 107, 182, 205, 710, 746, 984, 994
BspANI GGCC 8 cut(s) 589, 613, 661, 685, 709, 781, 805, 884
BspFNI CGCG 1 cut(s) 746
BspLI GGNNCC 3 cut(s) 138, 1242, 1266
BspMAI CTGCAG 2 cut(s) 82, 196
BspMI ACCTGC 1 cut(s) 507
BspPI GGATC 2 cut(s) 494, 1049
BspTNI GGTCTC 1 cut(s) 412
BsrDI GCAATG 3 cut(s) 45, 417, 435
BsrFI RCCGGY 1 cut(s) 884
BsrI ACTGG 4 cut(s) 220, 466, 529, 884
BssAI RCCGGY 1 cut(s) 884
BssMI GATC 4 cut(s) 220, 499, 1006, 1054
BssT1I CCWWGG 3 cut(s) 275, 1044, 1058
Bst4CI ACNGT 1 cut(s) 1255
Bst6I CTCTTC 2 cut(s) 11, 499
BstC8I GCNNGC 3 cut(s) 111, 1089, 1153
BstDEI CTNAG 2 cut(s) 32, 201
BstDSI CCRYGG 2 cut(s) 1044, 1058
BstEII GGTNACC 1 cut(s) 828
BstENI CCTNNNNNAGG 1 cut(s) 294
BstF5I GGATG 1 cut(s) 961
BstFNI CGCG 1 cut(s) 746
BstHHI GCGC 1 cut(s) 746
BstKTI GATC 4 cut(s) 223, 502, 1009, 1057
BstMAI GTCTC 1 cut(s) 412
BstMBI GATC 4 cut(s) 220, 499, 1006, 1054
BstMWI GCNNNNNNNGC 1 cut(s) 1000
BstPI GGTNACC 1 cut(s) 828
BstSFI CTRYAG 2 cut(s) 78, 192
BstUI CGCG 1 cut(s) 746
BstV1I GCAGC 2 cut(s) 419, 1198
BstV2I GAAGAC 2 cut(s) 257, 307
BstX2I RGATCY 1 cut(s) 1054
BstYI RGATCY 1 cut(s) 1054
BsuI GTATCC 2 cut(s) 86, 671
BsuRI GGCC 8 cut(s) 589, 613, 661, 685, 709, 781, 805, 884
BtgI CCRYGG 2 cut(s) 1044, 1058
BtsCI GGATG 1 cut(s) 961
BtsIMutI CAGTG 1 cut(s) 1217
BveI ACCTGC 1 cut(s) 507
Cac8I GCNNGC 3 cut(s) 111, 1089, 1153
CaiI CAGNNNCTG 1 cut(s) 257
CfoI GCGC 1 cut(s) 746
Cfr10I RCCGGY 1 cut(s) 884
Cfr13I GGNCC 9 cut(s) 527, 587, 611, 659, 683, 731, 755, 882, 1176
Cfr9I CCCGGG 5 cut(s) 577, 626, 649, 697, 793
CsiI ACCWGGT 1 cut(s) 544
Csp6I GTAC 4 cut(s) 86, 373, 911, 1204
CviAII CATG 6 cut(s) 437, 914, 1004, 1045, 1059, 1083
CviQI GTAC 4 cut(s) 86, 373, 911, 1204
DdeI CTNAG 2 cut(s) 32, 201
DpnI GATC 4 cut(s) 222, 501, 1008, 1056
DpnII GATC 4 cut(s) 220, 499, 1006, 1054
Eam1104I CTCTTC 2 cut(s) 11, 499
EarI CTCTTC 2 cut(s) 11, 499
EciI GGCGGA 1 cut(s) 999
Eco130I CCWWGG 3 cut(s) 275, 1044, 1058
Eco24I GRGCYC 1 cut(s) 141
Eco31I GGTCTC 1 cut(s) 412
Eco47I GGWCC 4 cut(s) 527, 731, 755, 1176
Eco57I CTGAAG 1 cut(s) 75
Eco88I CYCGRG 5 cut(s) 577, 626, 649, 697, 793
Eco91I GGTNACC 1 cut(s) 828
EcoNI CCTNNNNNAGG 1 cut(s) 294
EcoO65I GGTNACC 1 cut(s) 828
EcoT14I CCWWGG 3 cut(s) 275, 1044, 1058
EcoT22I ATGCAT 1 cut(s) 435
EcoT38I GRGCYC 1 cut(s) 141
ErhI CCWWGG 3 cut(s) 275, 1044, 1058
FaeI CATG 6 cut(s) 440, 917, 1007, 1048, 1062, 1086
FaqI GGGAC 2 cut(s) 656, 972
FatI CATG 6 cut(s) 436, 913, 1003, 1044, 1058, 1082
FauI CCCGC 3 cut(s) 175, 739, 987
FbaI TGATCA 1 cut(s) 220
FblI GTMKAC 1 cut(s) 521
Fnu4HI GCNGC 4 cut(s) 44, 408, 710, 1212
FokI GGATG 1 cut(s) 948
FriOI GRGCYC 1 cut(s) 141
Fsp4HI GCNGC 4 cut(s) 44, 408, 710, 1212
FspBI CTAG 3 cut(s) 47, 153, 933
GlaI GCGC 1 cut(s) 745
GluI GCNGC 4 cut(s) 44, 408, 710, 1212
GsaI CCCAGC 1 cut(s) 716
GsuI CTGGAG 1 cut(s) 483
HaeIII GGCC 8 cut(s) 589, 613, 661, 685, 709, 781, 805, 884
HhaI GCGC 1 cut(s) 746
Hin1II CATG 6 cut(s) 440, 917, 1007, 1048, 1062, 1086
Hin6I GCGC 1 cut(s) 744
HinP1I GCGC 1 cut(s) 744
HindIII AAGCTT 2 cut(s) 57, 1089
HinfI GANTC 3 cut(s) 654, 669, 702
HphI GGTGA 6 cut(s) 230, 348, 427, 822, 1010, 1065
Hpy166II GTNNAC 2 cut(s) 522, 1179
Hpy188I TCNGA 5 cut(s) 13, 253, 345, 499, 973
Hpy188III TCNNGA 7 cut(s) 297, 457, 594, 618, 762, 1108, 1160
Hpy8I GTNNAC 2 cut(s) 522, 1179
HpyAV CCTTC 4 cut(s) 159, 968, 1108, 1138
HpyCH4III ACNGT 1 cut(s) 1255
HpyCH4V TGCA 5 cut(s) 80, 194, 230, 428, 433
HpyF10VI GCNNNNNNNGC 1 cut(s) 1000
HpyF3I CTNAG 2 cut(s) 32, 201
Hsp92II CATG 6 cut(s) 440, 917, 1007, 1048, 1062, 1086
HspAI GCGC 1 cut(s) 744
Ksp22I TGATCA 1 cut(s) 220
Kzo9I GATC 4 cut(s) 220, 499, 1006, 1054
LmnI GCTCC 4 cut(s) 136, 151, 394, 464
Lsp1109I GCAGC 2 cut(s) 419, 1198
LweI GCATC 3 cut(s) 239, 244, 442
MabI ACCWGGT 1 cut(s) 544
MaeI CTAG 3 cut(s) 47, 153, 933
MaeIII GTNAC 4 cut(s) 828, 1071, 1078, 1136
MalI GATC 4 cut(s) 222, 501, 1008, 1056
MboI GATC 4 cut(s) 220, 499, 1006, 1054
MboII GAAGA 6 cut(s) 28, 257, 312, 486, 1064, 1123
MflI RGATCY 1 cut(s) 1054
MhlI GDGCHC 2 cut(s) 141, 148
MluCI AATT 4 cut(s) 349, 487, 850, 1028
MlyI GAGTC 1 cut(s) 678
Mph1103I ATGCAT 1 cut(s) 435
MroXI GAANNNNTTC 1 cut(s) 239
MseI TTAA 3 cut(s) 849, 1233, 1257
MslI CAYNNNNRTG 1 cut(s) 252
MspA1I CMGCKG 2 cut(s) 109, 712
Mva1269I GAATGC 2 cut(s) 247, 1155
MvnI CGCG 1 cut(s) 746
MwoI GCNNNNNNNGC 1 cut(s) 1000
NcoI CCATGG 2 cut(s) 1044, 1058
NdeII GATC 4 cut(s) 220, 499, 1006, 1054
NlaIII CATG 6 cut(s) 440, 917, 1007, 1048, 1062, 1086
NlaIV GGNNCC 3 cut(s) 138, 1242, 1266
NmeAIII GCCGAG 1 cut(s) 841
NmuCI GTSAC 2 cut(s) 828, 1071
NsiI ATGCAT 1 cut(s) 435
PctI GAATGC 2 cut(s) 247, 1155
PdmI GAANNNNTTC 1 cut(s) 239
PfeI GAWTC 2 cut(s) 654, 702
PflMI CCANNNNNTGG 2 cut(s) 608, 728
PfoI TCCNGGA 1 cut(s) 721
PkrI GCNGC 4 cut(s) 45, 409, 711, 1213
PleI GAGTC 1 cut(s) 677
PpsI GAGTC 1 cut(s) 677
PshBI ATTAAT 1 cut(s) 1233
PsiI TTATAA 1 cut(s) 486
PspEI GGTNACC 1 cut(s) 828
PspFI CCCAGC 1 cut(s) 712
PspN4I GGNNCC 3 cut(s) 138, 1242, 1266
PspPI GGNCC 9 cut(s) 527, 587, 611, 659, 683, 731, 755, 882, 1176
PstI CTGCAG 2 cut(s) 82, 196
PstNI CAGNNNCTG 1 cut(s) 257
PsuI RGATCY 1 cut(s) 1054
RsaI GTAC 4 cut(s) 87, 374, 912, 1205
RsaNI GTAC 4 cut(s) 86, 373, 911, 1204
RseI CAYNNNNRTG 1 cut(s) 252
SaqAI TTAA 3 cut(s) 849, 1233, 1257
SatI GCNGC 4 cut(s) 44, 408, 710, 1212
Sau3AI GATC 4 cut(s) 220, 499, 1006, 1054
Sau96I GGNCC 9 cut(s) 527, 587, 611, 659, 683, 731, 755, 882, 1176
ScaI AGTACT 1 cut(s) 1205
SchI GAGTC 1 cut(s) 678
SduI GDGCHC 2 cut(s) 141, 148
SexAI ACCWGGT 1 cut(s) 544
SfaNI GCATC 3 cut(s) 239, 244, 442
SfcI CTRYAG 2 cut(s) 78, 192
SinI GGWCC 4 cut(s) 527, 731, 755, 1176
SmaI CCCGGG 5 cut(s) 579, 628, 651, 699, 795
SmiMI CAYNNNNRTG 1 cut(s) 252
Sse9I AATT 4 cut(s) 349, 487, 850, 1028
SsiI CCGC 8 cut(s) 43, 107, 182, 205, 710, 746, 984, 994
SspMI CTAG 3 cut(s) 47, 153, 933
StyI CCWWGG 3 cut(s) 275, 1044, 1058
TaaI ACNGT 1 cut(s) 1255
TaqI TCGA 1 cut(s) 233
TaqII GACCGA 1 cut(s) 544
TasI AATT 4 cut(s) 349, 487, 850, 1028
TatI WGTACW 2 cut(s) 910, 1203
TauI GCSGC 2 cut(s) 46, 712
TfiI GAWTC 2 cut(s) 654, 702
Tru1I TTAA 3 cut(s) 849, 1233, 1257
Tru9I TTAA 3 cut(s) 849, 1233, 1257
TscAI CASTG 1 cut(s) 1224
TseFI GTSAC 2 cut(s) 828, 1071
TseI GCWGC 2 cut(s) 407, 1211
Tsp45I GTSAC 2 cut(s) 828, 1071
TspDTI ATGAA 4 cut(s) 323, 1239, 1263, 1263
TspMI CCCGGG 5 cut(s) 577, 626, 649, 697, 793
TspRI CASTG 1 cut(s) 1224
Van91I CCANNNNNTGG 2 cut(s) 608, 728
VpaK11BI GGWCC 4 cut(s) 527, 731, 755, 1176
VspI ATTAAT 1 cut(s) 1233
XagI CCTNNNNNAGG 1 cut(s) 294
XmaI CCCGGG 5 cut(s) 577, 626, 649, 697, 793
XmiI GTMKAC 1 cut(s) 521
XmnI GAANNNNTTC 1 cut(s) 239
XspI CTAG 3 cut(s) 47, 153, 933
ZrmI AGTACT 1 cut(s) 1205
Zsp2I ATGCAT 1 cut(s) 435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.