RLG00000001139

M-phase-specific PLK1-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0014057
Physical Location & Seq
Forward (+)
10714314 .. 10715987
1674 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001139

Sequence Viewer

Length: 1191 bp
ATGGAGACTTCAGAGAAGAGAAAGGAACGACTAAGAGCAATGCGCCTAGAAGCTGAAGCTTCTCATAATGATACAAGTTCAGATGTACCAGGTTACCTTTCCAATCCGCTGGCTGATGATAATGTGAATGTGGCGCAGGAGGAGCCCTGTGCTCCTTCGAGGTTTGGTTTTTATACAGACCCTATGGCGGGCTTCTCTTCAGACACTAAGCGATGTAAAGTTGGTGATCAGATTGCATCAAATAGTTTCAAACATTCAGATACTGGTGGTCTTCCTATGCCAAGGTTTCCTCCACCTCTTTCAGGAAGACCAAGGAACCCTGAAATGCCTCCTCAACCTCATCAGTTTCAGAGCAATTACTCACCAGACCAGAGAATGTTCCAACAAAACTTTGTTCCTCAGAGAAATCCCACAGGAATGGTGAGACCTTTTGTCATGCATCATACAAATCCACCTGAAGTCTGGAATGGAGCTCAAGGTCCGGCGAGTTATAATTTCCCTTCTGATCCCTCAAGAGAAAGCAGTTTTCCTGGCCCTAGATTTAGACCACCAGGTAGCCCCGGATTTAGACCACCAGGAAACTCCAGATTTGGGCCTCCGGGAAGCCCCGGATTTGGGCCACCGGGAAGCCCAGGATTTGGGCCACCGGGAAACCCAGGGTTTGGACCACCAGGAAGCTCGGGATTTGGACCACCAGGAAGCCCGGTATTTGGACCACCAGGAAGCCCCGGATTTGGGCCACCAGGAAGCCCCGGATTTGGACCACCTGGAAGCCCTGGTTTTGGTTCCAATACTCGGCAAGGTAGGGGACACTGGGTCAGTCATAGTCCGAGCCCTCATTCAGTACGTGGAGGTAGTCATAGTCCTAGATCAAGTTCAGGTAGAGGTAGGGGGCGCTCTGGGTCAGGATGGCGAGGTGGACGTGGGCAGGGTTCTGATGGTCGTCCAATGGGTCCAGAACAGTTTTACAATGCTTCCATGGTTGAACAAGATCCATGGAAAGGTTTGTCACCTGTTACATGGAAAGCTTTGCCACCTGTTATCCGGAAGGGGGTAGATACTCCCTTCAATGGTAACAAAAATAAAGCAAGCGTTTCAGAAGGTTCAAACAGGTCCACTCCACAGCCAAACTTGGCAGAATACTTGGCTGCCTCATTGAATGAAACTATTAATGAGGCATCAACCTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000380 GO:0000381 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0007623 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009266 GO:0009409 GO:0009605 GO:0009628 GO:0009649 GO:0009651 GO:0009889 GO:0009892 GO:0009914 GO:0009926 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0010817 GO:0010866 GO:0010921 GO:0014070 GO:0016020 GO:0016070 GO:0016071 GO:0016246 GO:0016441 GO:0016458 GO:0016604 GO:0019216 GO:0019219 GO:0019220 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032879 GO:0033036 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0035303 GO:0040029 GO:0042221 GO:0042752 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0043484 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0046890 GO:0048024 GO:0048511 GO:0048519 GO:0050684 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051174 GO:0051179 GO:0051234 GO:0051252 GO:0051336 GO:0051716 GO:0060255 GO:0060918 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070887 GO:0070918 GO:0071071 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071944 GO:0080090 GO:0090207 GO:0090304 GO:1901360 GO:1901698 GO:1901699 GO:1901703 GO:1903311 GO:1903725 GO:1903730 GO:2000012
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MPLKIP

Protein Analysis

397

Amino Acids

41.93

Weight (kDa)

9.89

Isoelectric Point (pI)

59.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014057)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24500 AT4G24500 AT4G24500
fragaria_vesca FvH4_5g34870
malus_domestica MD08G1199700.v1.1
prunus_persica Prupe.1G533200_v2.0.a1
pyrus_communis pycom08g17330 pycom15g34700
rosa_chinensis RchiOBHm_Chr7g0235791
rosa_laevigata RLG00000001139
rosa_roxburghii Rroxscaffold_3G00225630
rosa_rugosa Rorug07G0292800
rosa_samantha Rh7AG447700 Rh7BG419900 Rh7CG468200 Rh7DG436700
rosa_wichuraiana Rw7G037200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 492
AccB7I CCANNNNNTGG 2 cut(s) 638, 662
AccIII TCCGGA 1 cut(s) 1044
AciI CCGC 2 cut(s) 107, 188
AclWI GGATC 2 cut(s) 500, 986
AcuI CTGAAG 3 cut(s) 75, 183, 477
AfaI GTAC 2 cut(s) 87, 846
AgsI TTSAA 5 cut(s) 250, 986, 1069, 1107, 1159
AhdI GACNNNNNGTC 2 cut(s) 431, 815
AjiI CACGTC 1 cut(s) 923
AluBI AGCT 5 cut(s) 53, 59, 473, 678, 1028
AluI AGCT 5 cut(s) 53, 59, 473, 678, 1028
Alw21I GWGCWC 2 cut(s) 154, 475
Alw26I GTCTC 1 cut(s) 418
AlwI GGATC 2 cut(s) 500, 986
AlwNI CAGNNNCTG 1 cut(s) 263
Ama87I CYCGRG 1 cut(s) 679
Aor13HI TCCGGA 1 cut(s) 1044
AoxI GGCC 5 cut(s) 532, 593, 617, 641, 737
ApeKI GCWGC 1 cut(s) 1148
AseI ATTAAT 1 cut(s) 1170
AspLEI GCGC 3 cut(s) 45, 136, 897
AsuC2I CCSGG 8 cut(s) 561, 600, 609, 624, 648, 704, 729, 753
AsuHPI GGTGA 4 cut(s) 236, 354, 433, 1002
AvaI CYCGRG 1 cut(s) 679
AvaII GGWCC 7 cut(s) 479, 665, 689, 713, 761, 953, 1113
BanII GRGCYC 3 cut(s) 147, 475, 836
BbsI GAAGAC 2 cut(s) 263, 313
Bbv12I GWGCWC 2 cut(s) 154, 475
BbvI GCAGC 1 cut(s) 1135
BccI CCATC 2 cut(s) 903, 932
BcgI CGANNNNNNTGC 1 cut(s) 1167
BclI TGATCA 1 cut(s) 226
BcnI CCSGG 8 cut(s) 561, 600, 609, 624, 648, 704, 729, 753
BcoDI GTCTC 1 cut(s) 418
BfaI CTAG 3 cut(s) 47, 537, 867
BfoI RGCGCY 1 cut(s) 898
BisI GCNGC 1 cut(s) 1149
BlsI GCNGC 1 cut(s) 1150
Bme18I GGWCC 7 cut(s) 479, 665, 689, 713, 761, 953, 1113
BmeRI GACNNNNNGTC 2 cut(s) 431, 815
BmeT110I CYCGRG 1 cut(s) 679
BmgBI CACGTC 1 cut(s) 923
BmiI GGNNCC 4 cut(s) 144, 317, 787, 954
BmrI ACTGGG 1 cut(s) 823
BmsI GCATC 3 cut(s) 245, 448, 1187
BmuI ACTGGG 1 cut(s) 823
BpiI GAAGAC 2 cut(s) 263, 313
BpmI CTGGAG 1 cut(s) 568
BpuEI CTTGAG 2 cut(s) 459, 496
BpuMI CCSGG 8 cut(s) 561, 600, 609, 624, 648, 704, 729, 753
BsaAI YACGTR 1 cut(s) 848
BsaI GGTCTC 1 cut(s) 418
BsaWI WCCGGW 1 cut(s) 1044
Bse1I ACTGG 2 cut(s) 268, 818
Bse3DI GCAATG 1 cut(s) 45
BseAI TCCGGA 1 cut(s) 1044
BseGI GGATG 1 cut(s) 914
BseMI GCAATG 1 cut(s) 45
BseMII CTCAG 1 cut(s) 413
BseNI ACTGG 2 cut(s) 268, 818
BseRI GAGGAG 2 cut(s) 155, 321
BseXI GCAGC 1 cut(s) 1135
BshFI GGCC 5 cut(s) 534, 595, 619, 643, 739
BsiHKAI GWGCWC 2 cut(s) 154, 475
BsiHKCI CYCGRG 1 cut(s) 679
BslFI GGGAC 1 cut(s) 822
BsmAI GTCTC 1 cut(s) 418
BsmFI GGGAC 1 cut(s) 822
BsnI GGCC 5 cut(s) 534, 595, 619, 643, 739
Bso31I GGTCTC 1 cut(s) 418
BsoBI CYCGRG 1 cut(s) 679
Bsp1286I GDGCHC 4 cut(s) 147, 154, 475, 836
Bsp13I TCCGGA 1 cut(s) 1044
Bsp143I GATC 4 cut(s) 226, 505, 869, 991
Bsp19I CCATGG 2 cut(s) 978, 995
BspACI CCGC 2 cut(s) 107, 188
BspANI GGCC 5 cut(s) 534, 595, 619, 643, 739
BspCNI CTCAG 1 cut(s) 412
BspEI TCCGGA 1 cut(s) 1044
BspLI GGNNCC 4 cut(s) 144, 317, 787, 954
BspPI GGATC 2 cut(s) 500, 986
BspTNI GGTCTC 1 cut(s) 418
BsrDI GCAATG 1 cut(s) 45
BsrI ACTGG 2 cut(s) 268, 818
BssMI GATC 4 cut(s) 226, 505, 869, 991
BssT1I CCWWGG 4 cut(s) 281, 311, 978, 995
Bst4CI ACNGT 1 cut(s) 963
Bst6I CTCTTC 2 cut(s) 11, 202
BstBAI YACGTR 1 cut(s) 848
BstC8I GCNNGC 3 cut(s) 111, 190, 1090
BstDEI CTNAG 3 cut(s) 32, 207, 399
BstDSI CCRYGG 2 cut(s) 978, 995
BstEII GGTNACC 1 cut(s) 92
BstENI CCTNNNNNAGG 1 cut(s) 300
BstF5I GGATG 1 cut(s) 914
BstH2I RGCGCY 1 cut(s) 898
BstHHI GCGC 3 cut(s) 45, 136, 897
BstKTI GATC 4 cut(s) 229, 508, 872, 994
BstMAI GTCTC 1 cut(s) 418
BstMBI GATC 4 cut(s) 226, 505, 869, 991
BstMWI GCNNNNNNNGC 1 cut(s) 142
BstPI GGTNACC 1 cut(s) 92
BstV1I GCAGC 1 cut(s) 1135
BstV2I GAAGAC 2 cut(s) 263, 313
BstX2I RGATCY 1 cut(s) 991
BstXI CCANNNNNNTGG 2 cut(s) 109, 418
BstYI RGATCY 1 cut(s) 991
BsuRI GGCC 5 cut(s) 534, 595, 619, 643, 739
BtgI CCRYGG 2 cut(s) 978, 995
BtgZI GCGATG 1 cut(s) 226
BtrI CACGTC 1 cut(s) 923
BtsCI GGATG 1 cut(s) 914
BtsIMutI CAGTG 1 cut(s) 811
Cac8I GCNNGC 3 cut(s) 111, 190, 1090
CaiI CAGNNNCTG 1 cut(s) 263
CfoI GCGC 3 cut(s) 45, 136, 897
CsiI ACCWGGT 2 cut(s) 88, 550
Csp6I GTAC 2 cut(s) 86, 845
CviAII CATG 4 cut(s) 436, 979, 996, 1020
CviQI GTAC 2 cut(s) 86, 845
DdeI CTNAG 3 cut(s) 32, 207, 399
DpnI GATC 4 cut(s) 228, 507, 871, 993
DpnII GATC 4 cut(s) 226, 505, 869, 991
DriI GACNNNNNGTC 2 cut(s) 431, 815
Eam1104I CTCTTC 2 cut(s) 11, 202
Eam1105I GACNNNNNGTC 2 cut(s) 431, 815
EarI CTCTTC 2 cut(s) 11, 202
Ecl136II GAGCTC 1 cut(s) 473
Eco130I CCWWGG 4 cut(s) 281, 311, 978, 995
Eco24I GRGCYC 3 cut(s) 147, 475, 836
Eco31I GGTCTC 1 cut(s) 418
Eco47I GGWCC 7 cut(s) 479, 665, 689, 713, 761, 953, 1113
Eco53kI GAGCTC 1 cut(s) 473
Eco57I CTGAAG 3 cut(s) 75, 183, 477
Eco88I CYCGRG 1 cut(s) 679
Eco91I GGTNACC 1 cut(s) 92
EcoICRI GAGCTC 1 cut(s) 473
EcoNI CCTNNNNNAGG 1 cut(s) 300
EcoO65I GGTNACC 1 cut(s) 92
EcoT14I CCWWGG 4 cut(s) 281, 311, 978, 995
EcoT22I ATGCAT 1 cut(s) 441
EcoT38I GRGCYC 3 cut(s) 147, 475, 836
ErhI CCWWGG 4 cut(s) 281, 311, 978, 995
FaeI CATG 4 cut(s) 439, 982, 999, 1023
FaqI GGGAC 1 cut(s) 822
FatI CATG 4 cut(s) 435, 978, 995, 1019
FauI CCCGC 1 cut(s) 181
FbaI TGATCA 1 cut(s) 226
Fnu4HI GCNGC 1 cut(s) 1149
FokI GGATG 1 cut(s) 921
FriOI GRGCYC 3 cut(s) 147, 475, 836
Fsp4HI GCNGC 1 cut(s) 1149
FspBI CTAG 3 cut(s) 47, 537, 867
GlaI GCGC 3 cut(s) 44, 135, 896
GluI GCNGC 1 cut(s) 1149
GsuI CTGGAG 1 cut(s) 568
HaeII RGCGCY 1 cut(s) 898
HaeIII GGCC 5 cut(s) 534, 595, 619, 643, 739
HhaI GCGC 3 cut(s) 45, 136, 897
Hin1II CATG 4 cut(s) 439, 982, 999, 1023
Hin6I GCGC 3 cut(s) 43, 134, 895
HinP1I GCGC 3 cut(s) 43, 134, 895
HindIII AAGCTT 2 cut(s) 57, 1026
HphI GGTGA 4 cut(s) 236, 354, 433, 1002
Hpy166II GTNNAC 2 cut(s) 920, 1116
Hpy188III TCNNGA 8 cut(s) 303, 463, 513, 585, 681, 906, 956, 1045
Hpy8I GTNNAC 2 cut(s) 920, 1116
HpyAV CCTTC 5 cut(s) 165, 510, 1042, 1075, 1094
HpyCH4III ACNGT 1 cut(s) 963
HpyCH4IV ACGT 2 cut(s) 847, 922
HpyCH4V TGCA 2 cut(s) 236, 439
HpyF10VI GCNNNNNNNGC 1 cut(s) 142
HpyF3I CTNAG 3 cut(s) 32, 207, 399
HpySE526I ACGT 2 cut(s) 847, 922
Hsp92II CATG 4 cut(s) 439, 982, 999, 1023
HspAI GCGC 3 cut(s) 43, 134, 895
Kpn2I TCCGGA 1 cut(s) 1044
Ksp22I TGATCA 1 cut(s) 226
Kzo9I GATC 4 cut(s) 226, 505, 869, 991
LmnI GCTCC 3 cut(s) 142, 157, 470
Lsp1109I GCAGC 1 cut(s) 1135
LweI GCATC 3 cut(s) 245, 448, 1187
MabI ACCWGGT 2 cut(s) 88, 550
MaeI CTAG 3 cut(s) 47, 537, 867
MaeII ACGT 2 cut(s) 847, 922
MaeIII GTNAC 4 cut(s) 92, 1008, 1015, 1073
MalI GATC 4 cut(s) 228, 507, 871, 993
MboI GATC 4 cut(s) 226, 505, 869, 991
MboII GAAGA 4 cut(s) 28, 189, 263, 318
MflI RGATCY 1 cut(s) 991
MhlI GDGCHC 4 cut(s) 147, 154, 475, 836
MluCI AATT 2 cut(s) 355, 493
MmeI TCCRAC 1 cut(s) 406
Mph1103I ATGCAT 1 cut(s) 441
MroI TCCGGA 1 cut(s) 1044
MseI TTAA 1 cut(s) 1170
MslI CAYNNNNRTG 1 cut(s) 416
MspA1I CMGCKG 1 cut(s) 109
MwoI GCNNNNNNNGC 1 cut(s) 142
NciI CCSGG 8 cut(s) 561, 600, 609, 624, 648, 704, 729, 753
NcoI CCATGG 2 cut(s) 978, 995
NdeII GATC 4 cut(s) 226, 505, 869, 991
NlaIII CATG 4 cut(s) 439, 982, 999, 1023
NlaIV GGNNCC 4 cut(s) 144, 317, 787, 954
NmeAIII GCCGAG 1 cut(s) 775
NmuCI GTSAC 1 cut(s) 1008
NsiI ATGCAT 1 cut(s) 441
PasI CCCWGGG 1 cut(s) 656
PflMI CCANNNNNTGG 2 cut(s) 638, 662
PfoI TCCNGGA 1 cut(s) 598
PkrI GCNGC 1 cut(s) 1150
Ppu21I YACGTR 1 cut(s) 848
PshBI ATTAAT 1 cut(s) 1170
PsiI TTATAA 1 cut(s) 492
Psp124BI GAGCTC 1 cut(s) 475
PspEI GGTNACC 1 cut(s) 92
PspN4I GGNNCC 4 cut(s) 144, 317, 787, 954
PstNI CAGNNNCTG 1 cut(s) 263
PsuI RGATCY 1 cut(s) 991
RsaI GTAC 2 cut(s) 87, 846
RsaNI GTAC 2 cut(s) 86, 845
RseI CAYNNNNRTG 1 cut(s) 416
SacI GAGCTC 1 cut(s) 475
SaqAI TTAA 1 cut(s) 1170
SatI GCNGC 1 cut(s) 1149
Sau3AI GATC 4 cut(s) 226, 505, 869, 991
SduI GDGCHC 4 cut(s) 147, 154, 475, 836
SexAI ACCWGGT 2 cut(s) 88, 550
SfaNI GCATC 3 cut(s) 245, 448, 1187
SinI GGWCC 7 cut(s) 479, 665, 689, 713, 761, 953, 1113
SmiMI CAYNNNNRTG 1 cut(s) 416
SmlI CTYRAG 2 cut(s) 474, 511
SmoI CTYRAG 2 cut(s) 474, 511
Sse9I AATT 2 cut(s) 355, 493
SsiI CCGC 2 cut(s) 107, 188
SspMI CTAG 3 cut(s) 47, 537, 867
SstI GAGCTC 1 cut(s) 475
StyI CCWWGG 4 cut(s) 281, 311, 978, 995
TaaI ACNGT 1 cut(s) 963
TaiI ACGT 2 cut(s) 850, 925
TaqI TCGA 1 cut(s) 158
TasI AATT 2 cut(s) 355, 493
Tru1I TTAA 1 cut(s) 1170
Tru9I TTAA 1 cut(s) 1170
TscAI CASTG 1 cut(s) 818
TseFI GTSAC 1 cut(s) 1008
TseI GCWGC 1 cut(s) 1148
Tsp45I GTSAC 1 cut(s) 1008
TspDTI ATGAA 1 cut(s) 1176
TspRI CASTG 1 cut(s) 818
Van91I CCANNNNNTGG 2 cut(s) 638, 662
VpaK11BI GGWCC 7 cut(s) 479, 665, 689, 713, 761, 953, 1113
VspI ATTAAT 1 cut(s) 1170
XagI CCTNNNNNAGG 1 cut(s) 300
XcmI CCANNNNNNNNNTGG 1 cut(s) 459
XspI CTAG 3 cut(s) 47, 537, 867
Zsp2I ATGCAT 1 cut(s) 441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.