Rh7DG436700

M-phase-specific PLK1-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0014057
Physical Location & Seq
Reverse (-)
62246465 .. 62249551
3087 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG436700.1

Sequence Viewer

Length: 1167 bp
ATGGAGACTTCAGAGAAGAGAAAGGAACGACTACGAGCAATGCGCCTAGAAGCTGAAGCTTCTCATAATGATACAAGTTCAGATGTACCAGGTTACCTTTCCAATCCGCTGGCTGATGATAATGTGAATGTGGCACAGGAGGAGCCCTGTGCTCCTTCGAGGTTTGGTTTTTATACAGACCCAATGGCGGGCTTCTCTTCAGACACTAAGCGATGTAAAGTTGGTGATCAGATTGCATCAAATAGTTTCAAACATTCAGATACTGGTGGTCTTCCTATGCCAAGGTTTCCTCCACCTCTTTCAGGAAGACCAAGGAACCCTGGAATGCCTCCTCCACCTCATCAGTTTCAGAGCAATTACTCACCAGACCAGAGAATGTACCAACAAAACTTTGTTCCTCAGAGAAATCCCACAGGAATGGTGAGACCTTTTGTCATGCATCATACAAATCCACCTGAAGTCTGGAATGGAGCTCAAGGTCCGGCGAGTTATAATTTCCCTCCTGATCCCTCAAGAGAAAGCAGTTTTCCTGGCCCTAGATTTAGACCACCAGGTAGCCCCGGATTTAGACCACCGGGAAGCCCCGGATTTGGGCCACTGGGAAGCCCCGGATTTGGGCCATCAGGAAGCCCCGGATTTGGGCCACCGGGAAGCTCGGGATTTGGGCCACCGGGAAGCCCGGGATTCGGGCCACCAGGAAGCCCCGGATTCGGGCCACCAGGAAGCCCCGGATTTGGACCACCCGGAAGCCCTGGGTTTGGTTCCAATACTCGGCAAGGTAGGGGGCACTGGGTCAGTCATAGTCCAAGCCCTCATTCAGTACATGGAGGTAGTCATAGTCCTAGATCAAGTTCAGGTAGAGGTAGGGGGCGCTCTGGGTCAGGATGGCGAGGTGGACGTGGGCGGGGTTCTGATGGTCGTCCATTGGGTCCAGAACAGTTTTACAATGCTTCCATGGTTGAAGAAGATCCATGGAAGGGTTTGTCACCTGTTACATGGAAAGCTTTGCCACCTGTTATCCGGAAGGGGGTAGATACTCCCTTCAATGGTAACAAAAATAAAGCAAGCGTTTCAGAAGGTTCAAACAGGTCCACTCCACAGCCAAACTTGGCAGAATACTTGGCTGCCTCATTGAATGAAACTATTAATGAGGCATCAACCTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000380 GO:0000381 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0007623 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009266 GO:0009409 GO:0009605 GO:0009628 GO:0009649 GO:0009651 GO:0009889 GO:0009892 GO:0009914 GO:0009926 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0010817 GO:0010866 GO:0010921 GO:0014070 GO:0016020 GO:0016070 GO:0016071 GO:0016246 GO:0016441 GO:0016458 GO:0016604 GO:0019216 GO:0019219 GO:0019220 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032879 GO:0033036 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0035303 GO:0040029 GO:0042221 GO:0042752 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0043484 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0046890 GO:0048024 GO:0048511 GO:0048519 GO:0050684 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051174 GO:0051179 GO:0051234 GO:0051252 GO:0051336 GO:0051716 GO:0060255 GO:0060918 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070887 GO:0070918 GO:0071071 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071944 GO:0080090 GO:0090207 GO:0090304 GO:1901360 GO:1901698 GO:1901699 GO:1901703 GO:1903311 GO:1903725 GO:1903730 GO:2000012
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MPLKIP

Protein Analysis

388

Amino Acids

40.97

Weight (kDa)

9.75

Isoelectric Point (pI)

60.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014057)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24500 AT4G24500 AT4G24500
fragaria_vesca FvH4_5g34870
malus_domestica MD08G1199700.v1.1
prunus_persica Prupe.1G533200_v2.0.a1
pyrus_communis pycom08g17330 pycom15g34700
rosa_chinensis RchiOBHm_Chr7g0235791
rosa_laevigata RLG00000001139
rosa_roxburghii Rroxscaffold_3G00225630
rosa_rugosa Rorug07G0292800
rosa_samantha Rh7AG447700 Rh7BG419900 Rh7CG468200 Rh7DG436700
rosa_wichuraiana Rw7G037200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 492
AccIII TCCGGA 1 cut(s) 1020
AciI CCGC 3 cut(s) 107, 188, 904
AclWI GGATC 2 cut(s) 500, 962
AcuI CTGAAG 3 cut(s) 75, 183, 477
AfaI GTAC 3 cut(s) 87, 380, 822
AgsI TTSAA 5 cut(s) 250, 962, 1045, 1083, 1135
AhdI GACNNNNNGTC 1 cut(s) 431
AjiI CACGTC 1 cut(s) 899
AjnI CCWGG 7 cut(s) 88, 319, 529, 550, 694, 718, 751
AjuI GAANNNNNNNTTGG 2 cut(s) 799, 831
AluBI AGCT 5 cut(s) 53, 59, 473, 654, 1004
AluI AGCT 5 cut(s) 53, 59, 473, 654, 1004
Alw21I GWGCWC 2 cut(s) 154, 475
Alw26I GTCTC 1 cut(s) 418
AlwI GGATC 2 cut(s) 500, 962
AlwNI CAGNNNCTG 1 cut(s) 263
Ama87I CYCGRG 2 cut(s) 655, 679
Aor13HI TCCGGA 1 cut(s) 1020
AoxI GGCC 7 cut(s) 532, 593, 617, 641, 665, 689, 713
ApeKI GCWGC 1 cut(s) 1124
AseI ATTAAT 1 cut(s) 1146
AspLEI GCGC 2 cut(s) 45, 873
AsuHPI GGTGA 4 cut(s) 236, 354, 433, 978
AvaI CYCGRG 2 cut(s) 655, 679
AvaII GGWCC 4 cut(s) 479, 737, 929, 1089
BaeGI GKGCMC 1 cut(s) 789
BanII GRGCYC 2 cut(s) 147, 475
BbsI GAAGAC 2 cut(s) 263, 313
Bbv12I GWGCWC 2 cut(s) 154, 475
BbvI GCAGC 1 cut(s) 1111
BccI CCATC 3 cut(s) 628, 879, 908
BcgI CGANNNNNNTGC 1 cut(s) 1143
BciT130I CCWGG 7 cut(s) 90, 321, 531, 552, 696, 720, 753
BclI TGATCA 1 cut(s) 226
BcoDI GTCTC 1 cut(s) 418
BfaI CTAG 3 cut(s) 47, 537, 843
BfoI RGCGCY 1 cut(s) 874
BisI GCNGC 1 cut(s) 1125
BlsI GCNGC 1 cut(s) 1126
Bme18I GGWCC 4 cut(s) 479, 737, 929, 1089
BmeRI GACNNNNNGTC 1 cut(s) 431
BmeT110I CYCGRG 2 cut(s) 655, 679
BmgBI CACGTC 1 cut(s) 899
BmiI GGNNCC 4 cut(s) 144, 317, 763, 930
BmrI ACTGGG 2 cut(s) 608, 799
BmsI GCATC 3 cut(s) 245, 448, 1163
BmuI ACTGGG 2 cut(s) 608, 799
BpiI GAAGAC 2 cut(s) 263, 313
BpuEI CTTGAG 2 cut(s) 459, 496
BsaI GGTCTC 1 cut(s) 418
BsaWI WCCGGW 1 cut(s) 1020
Bse1I ACTGG 3 cut(s) 268, 603, 794
Bse3DI GCAATG 1 cut(s) 45
BseAI TCCGGA 1 cut(s) 1020
BseBI CCWGG 7 cut(s) 90, 321, 531, 552, 696, 720, 753
BseGI GGATG 1 cut(s) 890
BseMI GCAATG 1 cut(s) 45
BseMII CTCAG 1 cut(s) 413
BseNI ACTGG 3 cut(s) 268, 603, 794
BseRI GAGGAG 2 cut(s) 155, 321
BseSI GKGCMC 1 cut(s) 789
BseXI GCAGC 1 cut(s) 1111
BshFI GGCC 7 cut(s) 534, 595, 619, 643, 667, 691, 715
BsiHKAI GWGCWC 2 cut(s) 154, 475
BsiHKCI CYCGRG 2 cut(s) 655, 679
BsmAI GTCTC 1 cut(s) 418
BsmI GAATGC 1 cut(s) 330
BsnI GGCC 7 cut(s) 534, 595, 619, 643, 667, 691, 715
Bso31I GGTCTC 1 cut(s) 418
BsoBI CYCGRG 2 cut(s) 655, 679
Bsp1286I GDGCHC 4 cut(s) 147, 154, 475, 789
Bsp13I TCCGGA 1 cut(s) 1020
Bsp143I GATC 4 cut(s) 226, 505, 845, 967
Bsp19I CCATGG 2 cut(s) 954, 971
BspACI CCGC 3 cut(s) 107, 188, 904
BspANI GGCC 7 cut(s) 534, 595, 619, 643, 667, 691, 715
BspCNI CTCAG 1 cut(s) 412
BspEI TCCGGA 1 cut(s) 1020
BspLI GGNNCC 4 cut(s) 144, 317, 763, 930
BspPI GGATC 2 cut(s) 500, 962
BspTNI GGTCTC 1 cut(s) 418
BsrDI GCAATG 1 cut(s) 45
BsrI ACTGG 3 cut(s) 268, 603, 794
BssMI GATC 4 cut(s) 226, 505, 845, 967
BssT1I CCWWGG 4 cut(s) 281, 311, 954, 971
Bst2UI CCWGG 7 cut(s) 90, 321, 531, 552, 696, 720, 753
Bst4CI ACNGT 1 cut(s) 939
Bst6I CTCTTC 2 cut(s) 11, 202
BstC8I GCNNGC 3 cut(s) 111, 190, 1066
BstDEI CTNAG 2 cut(s) 207, 399
BstDSI CCRYGG 2 cut(s) 954, 971
BstEII GGTNACC 1 cut(s) 92
BstENI CCTNNNNNAGG 1 cut(s) 300
BstF5I GGATG 1 cut(s) 890
BstH2I RGCGCY 1 cut(s) 874
BstHHI GCGC 2 cut(s) 45, 873
BstKTI GATC 4 cut(s) 229, 508, 848, 970
BstMAI GTCTC 1 cut(s) 418
BstMBI GATC 4 cut(s) 226, 505, 845, 967
BstNI CCWGG 7 cut(s) 90, 321, 531, 552, 696, 720, 753
BstPI GGTNACC 1 cut(s) 92
BstSLI GKGCMC 1 cut(s) 789
BstV1I GCAGC 1 cut(s) 1111
BstV2I GAAGAC 2 cut(s) 263, 313
BstX2I RGATCY 1 cut(s) 967
BstXI CCANNNNNNTGG 2 cut(s) 109, 418
BstYI RGATCY 1 cut(s) 967
BsuRI GGCC 7 cut(s) 534, 595, 619, 643, 667, 691, 715
BtgI CCRYGG 2 cut(s) 954, 971
BtgZI GCGATG 1 cut(s) 226
BtrI CACGTC 1 cut(s) 899
BtsCI GGATG 1 cut(s) 890
BtsIMutI CAGTG 2 cut(s) 596, 787
Cac8I GCNNGC 3 cut(s) 111, 190, 1066
CaiI CAGNNNCTG 1 cut(s) 263
CfoI GCGC 2 cut(s) 45, 873
Cfr9I CCCGGG 1 cut(s) 679
CsiI ACCWGGT 2 cut(s) 88, 550
Csp6I GTAC 3 cut(s) 86, 379, 821
CviAII CATG 5 cut(s) 436, 824, 955, 972, 996
CviQI GTAC 3 cut(s) 86, 379, 821
DdeI CTNAG 2 cut(s) 207, 399
DpnI GATC 4 cut(s) 228, 507, 847, 969
DpnII GATC 4 cut(s) 226, 505, 845, 967
DriI GACNNNNNGTC 1 cut(s) 431
Eam1104I CTCTTC 2 cut(s) 11, 202
Eam1105I GACNNNNNGTC 1 cut(s) 431
EarI CTCTTC 2 cut(s) 11, 202
Ecl136II GAGCTC 1 cut(s) 473
Eco130I CCWWGG 4 cut(s) 281, 311, 954, 971
Eco24I GRGCYC 2 cut(s) 147, 475
Eco31I GGTCTC 1 cut(s) 418
Eco47I GGWCC 4 cut(s) 479, 737, 929, 1089
Eco53kI GAGCTC 1 cut(s) 473
Eco57I CTGAAG 3 cut(s) 75, 183, 477
Eco88I CYCGRG 2 cut(s) 655, 679
Eco91I GGTNACC 1 cut(s) 92
EcoICRI GAGCTC 1 cut(s) 473
EcoNI CCTNNNNNAGG 1 cut(s) 300
EcoO65I GGTNACC 1 cut(s) 92
EcoRII CCWGG 7 cut(s) 88, 319, 529, 550, 694, 718, 751
EcoT14I CCWWGG 4 cut(s) 281, 311, 954, 971
EcoT22I ATGCAT 1 cut(s) 441
EcoT38I GRGCYC 2 cut(s) 147, 475
ErhI CCWWGG 4 cut(s) 281, 311, 954, 971
FaeI CATG 5 cut(s) 439, 827, 958, 975, 999
FatI CATG 5 cut(s) 435, 823, 954, 971, 995
FauI CCCGC 2 cut(s) 181, 897
FbaI TGATCA 1 cut(s) 226
Fnu4HI GCNGC 1 cut(s) 1125
FokI GGATG 1 cut(s) 897
FriOI GRGCYC 2 cut(s) 147, 475
Fsp4HI GCNGC 1 cut(s) 1125
FspBI CTAG 3 cut(s) 47, 537, 843
GlaI GCGC 2 cut(s) 44, 872
GluI GCNGC 1 cut(s) 1125
HaeII RGCGCY 1 cut(s) 874
HaeIII GGCC 7 cut(s) 534, 595, 619, 643, 667, 691, 715
HhaI GCGC 2 cut(s) 45, 873
Hin1II CATG 5 cut(s) 439, 827, 958, 975, 999
Hin6I GCGC 2 cut(s) 43, 871
HinP1I GCGC 2 cut(s) 43, 871
HindIII AAGCTT 2 cut(s) 57, 1002
HinfI GANTC 2 cut(s) 684, 708
HphI GGTGA 4 cut(s) 236, 354, 433, 978
Hpy166II GTNNAC 2 cut(s) 896, 1092
Hpy188I TCNGA 9 cut(s) 13, 82, 202, 231, 259, 351, 402, 913, 1075
Hpy188III TCNNGA 9 cut(s) 303, 463, 503, 513, 624, 657, 882, 932, 1021
Hpy8I GTNNAC 2 cut(s) 896, 1092
HpyAV CCTTC 5 cut(s) 165, 970, 1018, 1051, 1070
HpyCH4III ACNGT 1 cut(s) 939
HpyCH4IV ACGT 1 cut(s) 898
HpyCH4V TGCA 2 cut(s) 236, 439
HpyF3I CTNAG 2 cut(s) 207, 399
HpySE526I ACGT 1 cut(s) 898
Hsp92II CATG 5 cut(s) 439, 827, 958, 975, 999
HspAI GCGC 2 cut(s) 43, 871
Kpn2I TCCGGA 1 cut(s) 1020
Ksp22I TGATCA 1 cut(s) 226
Kzo9I GATC 4 cut(s) 226, 505, 845, 967
LmnI GCTCC 3 cut(s) 142, 157, 470
Lsp1109I GCAGC 1 cut(s) 1111
LweI GCATC 3 cut(s) 245, 448, 1163
MabI ACCWGGT 2 cut(s) 88, 550
MaeI CTAG 3 cut(s) 47, 537, 843
MaeII ACGT 1 cut(s) 898
MaeIII GTNAC 4 cut(s) 92, 984, 991, 1049
MalI GATC 4 cut(s) 228, 507, 847, 969
MboI GATC 4 cut(s) 226, 505, 845, 967
MboII GAAGA 6 cut(s) 28, 189, 263, 318, 974, 977
MflI RGATCY 1 cut(s) 967
MhlI GDGCHC 4 cut(s) 147, 154, 475, 789
MluCI AATT 2 cut(s) 355, 493
Mph1103I ATGCAT 1 cut(s) 441
MroI TCCGGA 1 cut(s) 1020
MseI TTAA 1 cut(s) 1146
MslI CAYNNNNRTG 1 cut(s) 416
MspA1I CMGCKG 1 cut(s) 109
Mva1269I GAATGC 1 cut(s) 330
MvaI CCWGG 7 cut(s) 90, 321, 531, 552, 696, 720, 753
NcoI CCATGG 2 cut(s) 954, 971
NdeII GATC 4 cut(s) 226, 505, 845, 967
NlaIII CATG 5 cut(s) 439, 827, 958, 975, 999
NlaIV GGNNCC 4 cut(s) 144, 317, 763, 930
NmeAIII GCCGAG 1 cut(s) 751
NmuCI GTSAC 1 cut(s) 984
NsiI ATGCAT 1 cut(s) 441
PasI CCCWGGG 1 cut(s) 752
PctI GAATGC 1 cut(s) 330
PfeI GAWTC 2 cut(s) 684, 708
PkrI GCNGC 1 cut(s) 1126
PshBI ATTAAT 1 cut(s) 1146
PsiI TTATAA 1 cut(s) 492
Psp124BI GAGCTC 1 cut(s) 475
Psp6I CCWGG 7 cut(s) 88, 319, 529, 550, 694, 718, 751
PspEI GGTNACC 1 cut(s) 92
PspGI CCWGG 7 cut(s) 88, 319, 529, 550, 694, 718, 751
PspN4I GGNNCC 4 cut(s) 144, 317, 763, 930
PstNI CAGNNNCTG 1 cut(s) 263
PsuI RGATCY 1 cut(s) 967
RsaI GTAC 3 cut(s) 87, 380, 822
RsaNI GTAC 3 cut(s) 86, 379, 821
RseI CAYNNNNRTG 1 cut(s) 416
SacI GAGCTC 1 cut(s) 475
SaqAI TTAA 1 cut(s) 1146
SatI GCNGC 1 cut(s) 1125
Sau3AI GATC 4 cut(s) 226, 505, 845, 967
SduI GDGCHC 4 cut(s) 147, 154, 475, 789
SexAI ACCWGGT 2 cut(s) 88, 550
SfaNI GCATC 3 cut(s) 245, 448, 1163
SinI GGWCC 4 cut(s) 479, 737, 929, 1089
SmaI CCCGGG 1 cut(s) 681
SmiMI CAYNNNNRTG 1 cut(s) 416
SmlI CTYRAG 2 cut(s) 474, 511
SmoI CTYRAG 2 cut(s) 474, 511
Sse9I AATT 2 cut(s) 355, 493
SsiI CCGC 3 cut(s) 107, 188, 904
SspMI CTAG 3 cut(s) 47, 537, 843
SstI GAGCTC 1 cut(s) 475
StyI CCWWGG 4 cut(s) 281, 311, 954, 971
TaaI ACNGT 1 cut(s) 939
TaiI ACGT 1 cut(s) 901
TaqI TCGA 1 cut(s) 158
TasI AATT 2 cut(s) 355, 493
TatI WGTACW 1 cut(s) 820
TfiI GAWTC 2 cut(s) 684, 708
Tru1I TTAA 1 cut(s) 1146
Tru9I TTAA 1 cut(s) 1146
TscAI CASTG 2 cut(s) 603, 794
TseFI GTSAC 1 cut(s) 984
TseI GCWGC 1 cut(s) 1124
Tsp45I GTSAC 1 cut(s) 984
TspDTI ATGAA 1 cut(s) 1152
TspMI CCCGGG 1 cut(s) 679
TspRI CASTG 2 cut(s) 603, 794
VpaK11BI GGWCC 4 cut(s) 479, 737, 929, 1089
VspI ATTAAT 1 cut(s) 1146
XagI CCTNNNNNAGG 1 cut(s) 300
XcmI CCANNNNNNNNNTGG 1 cut(s) 459
XmaI CCCGGG 1 cut(s) 679
XspI CTAG 3 cut(s) 47, 537, 843
Zsp2I ATGCAT 1 cut(s) 441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.