Rh7AG447700

M-phase-specific PLK1-interacting protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
61046621 .. 61049576
2956 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG447700.1

Sequence Viewer

Length: 1215 bp
ATGGAGACTTCAGAGAAGAGAAAGGAACGACTAAGAGCAATGCGCCTAGAAGCTGAAGCTTCTCATAATGATACAAGTTCAGATGTACCAGGTTACCTTTCCAATCCGCTGGCTGATGATAATGTGAATGTGGCGCAGGAGGAGCCCTGTGCTCCTTCGAGGTTTGGTTTTTATACAGACCCAATGGCGGGCTTCTCTTCAGACACTAAGCGATGTAAAGTTGGTGATCAGATAGCATCAAATAGTTTCAAACATTCAGATACAGGTGATCTTCCTTTGCCAAGGTTTCCTCCACCTCTTTCAGGAAGACCAAGTAACCCTGGAATGCCTCCTCCACCTCATCAGTTTCCGAGCAATTACTCACCAGACCAGAGAATGTACCAACAAAACTTTGTTCCTCAGAGAAATCCCACTGGAATGGTGAGACCTTTTGTCATGCATCATACAAATCCACCTGAAGTCTGGAATGGAGCTCAAGGTCCGGCGAGTTATAATTTCCCTCCTGATCCCTCAAGAGAAAGCAGTTTTCCTGGCCCTAGATTTAGACCACCAGGTAGCCCCAGATTTAGACCACCAGGTAGCCCTGGATTTAGACCACCGGGAAACCCCGGATTTGGGCCACCGGGAAGCCCCGGATTTGGGCCACCGGGAAGCCCGGGATTTGGGCCCCCGGGAAGCCCGGGATTTGGGCCACTGGGAAGCTCGGGATTTGGGCCACCAGGAAGCTCGGGATTTGGACCACCAGGAAGCCCGGGATTTGGGCCACCAGGAAGCCCTGGATTTGGACCACCCAGAAGCCCTGGGTTTGGTTCCAATACTCGGCAAGGTAGGGGGCACTGGGTCAGTCATAGTCCAAGCCCTCATTCAGTACATGGAGGTAGTCATAGTCCTAGATCAAGTTCAGGTAGAGGTAGGGGGCGCTCTGGGTCAGGATGGCGAGGTGGACGTGGGCGGGGTTCTGATGGTCGTCCATTGGGTCCAGAACAGTTTTACAATACTTCCATGGTTGAAGAAGATCCATGGAAAGGTTTGTCACCTGTTACATGGAAAGCTTTGCCACCTGTTATCCGGAAGGGGGTAGATACTCCCTTCAATGGTAACAAAAATAAAGCAAGCGTTTCAGAAGGTTCGAACAGGTCCACTCCACAGCCAAACTTGGCAGAATACTTGGCTGCCTCATTGAATGAAACTATTAATGAGGCATCAACCTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

404

Amino Acids

42.65

Weight (kDa)

9.85

Isoelectric Point (pI)

60.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014057)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24500 AT4G24500 AT4G24500
fragaria_vesca FvH4_5g34870
malus_domestica MD08G1199700.v1.1
prunus_persica Prupe.1G533200_v2.0.a1
pyrus_communis pycom08g17330 pycom15g34700
rosa_chinensis RchiOBHm_Chr7g0235791
rosa_laevigata RLG00000001139
rosa_roxburghii Rroxscaffold_3G00225630
rosa_rugosa Rorug07G0292800
rosa_samantha Rh7AG447700 Rh7BG419900 Rh7CG468200 Rh7DG436700
rosa_wichuraiana Rw7G037200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 492
AccIII TCCGGA 1 cut(s) 1068
AciI CCGC 3 cut(s) 107, 188, 952
AclWI GGATC 2 cut(s) 500, 1010
AcuI CTGAAG 3 cut(s) 75, 183, 477
AfaI GTAC 3 cut(s) 87, 380, 870
AgsI TTSAA 4 cut(s) 250, 1010, 1093, 1183
AhdI GACNNNNNGTC 1 cut(s) 431
AjiI CACGTC 1 cut(s) 947
AjuI GAANNNNNNNTTGG 2 cut(s) 847, 879
AluBI AGCT 6 cut(s) 53, 59, 473, 702, 726, 1052
AluI AGCT 6 cut(s) 53, 59, 473, 702, 726, 1052
Alw21I GWGCWC 2 cut(s) 154, 475
Alw26I GTCTC 1 cut(s) 418
AlwI GGATC 2 cut(s) 500, 1010
Ama87I CYCGRG 6 cut(s) 655, 670, 679, 703, 727, 751
Aor13HI TCCGGA 1 cut(s) 1068
AoxI GGCC 7 cut(s) 532, 617, 641, 665, 689, 713, 761
ApaI GGGCCC 1 cut(s) 669
ApeKI GCWGC 1 cut(s) 1172
AseI ATTAAT 1 cut(s) 1194
AspLEI GCGC 3 cut(s) 45, 136, 921
AsuHPI GGTGA 5 cut(s) 236, 278, 354, 433, 1026
AsuII TTCGAA 1 cut(s) 1130
AvaI CYCGRG 6 cut(s) 655, 670, 679, 703, 727, 751
AvaII GGWCC 5 cut(s) 479, 737, 785, 977, 1137
BaeGI GKGCMC 2 cut(s) 669, 837
BanII GRGCYC 3 cut(s) 147, 475, 669
BbsI GAAGAC 1 cut(s) 313
Bbv12I GWGCWC 2 cut(s) 154, 475
BbvI GCAGC 1 cut(s) 1159
BccI CCATC 2 cut(s) 927, 956
BcgI CGANNNNNNTGC 1 cut(s) 1191
BclI TGATCA 1 cut(s) 226
BcoDI GTCTC 1 cut(s) 418
BfaI CTAG 3 cut(s) 47, 537, 891
BfoI RGCGCY 1 cut(s) 922
BisI GCNGC 1 cut(s) 1173
BlsI GCNGC 1 cut(s) 1174
Bme18I GGWCC 5 cut(s) 479, 737, 785, 977, 1137
BmeRI GACNNNNNGTC 1 cut(s) 431
BmeT110I CYCGRG 6 cut(s) 655, 670, 679, 703, 727, 751
BmgBI CACGTC 1 cut(s) 947
BmiI GGNNCC 5 cut(s) 144, 667, 668, 811, 978
BmrI ACTGGG 2 cut(s) 704, 847
BmsI GCATC 3 cut(s) 245, 448, 1211
BmuI ACTGGG 2 cut(s) 704, 847
BpiI GAAGAC 1 cut(s) 313
Bpu14I TTCGAA 1 cut(s) 1130
BpuEI CTTGAG 2 cut(s) 459, 496
BsaI GGTCTC 1 cut(s) 418
BsaWI WCCGGW 1 cut(s) 1068
Bse1I ACTGG 3 cut(s) 418, 699, 842
Bse3DI GCAATG 1 cut(s) 45
BseAI TCCGGA 1 cut(s) 1068
BseGI GGATG 1 cut(s) 938
BseMI GCAATG 1 cut(s) 45
BseMII CTCAG 1 cut(s) 413
BseNI ACTGG 3 cut(s) 418, 699, 842
BseRI GAGGAG 2 cut(s) 155, 321
BseSI GKGCMC 2 cut(s) 669, 837
BseXI GCAGC 1 cut(s) 1159
BshFI GGCC 7 cut(s) 534, 619, 643, 667, 691, 715, 763
BsiHKAI GWGCWC 2 cut(s) 154, 475
BsiHKCI CYCGRG 6 cut(s) 655, 670, 679, 703, 727, 751
BsmAI GTCTC 1 cut(s) 418
BsmI GAATGC 1 cut(s) 330
BsnI GGCC 7 cut(s) 534, 619, 643, 667, 691, 715, 763
Bso31I GGTCTC 1 cut(s) 418
BsoBI CYCGRG 6 cut(s) 655, 670, 679, 703, 727, 751
Bsp119I TTCGAA 1 cut(s) 1130
Bsp120I GGGCCC 1 cut(s) 665
Bsp1286I GDGCHC 5 cut(s) 147, 154, 475, 669, 837
Bsp13I TCCGGA 1 cut(s) 1068
Bsp143I GATC 5 cut(s) 226, 268, 505, 893, 1015
Bsp19I CCATGG 2 cut(s) 1002, 1019
BspACI CCGC 3 cut(s) 107, 188, 952
BspANI GGCC 7 cut(s) 534, 619, 643, 667, 691, 715, 763
BspCNI CTCAG 1 cut(s) 412
BspEI TCCGGA 1 cut(s) 1068
BspLI GGNNCC 5 cut(s) 144, 667, 668, 811, 978
BspPI GGATC 2 cut(s) 500, 1010
BspT104I TTCGAA 1 cut(s) 1130
BspTNI GGTCTC 1 cut(s) 418
BsrDI GCAATG 1 cut(s) 45
BsrI ACTGG 3 cut(s) 418, 699, 842
BssMI GATC 5 cut(s) 226, 268, 505, 893, 1015
BssT1I CCWWGG 3 cut(s) 281, 1002, 1019
Bst4CI ACNGT 1 cut(s) 987
Bst6I CTCTTC 2 cut(s) 11, 202
BstBI TTCGAA 1 cut(s) 1130
BstC8I GCNNGC 3 cut(s) 111, 190, 1114
BstDEI CTNAG 3 cut(s) 32, 207, 399
BstDSI CCRYGG 2 cut(s) 1002, 1019
BstEII GGTNACC 1 cut(s) 92
BstENI CCTNNNNNAGG 1 cut(s) 300
BstF5I GGATG 1 cut(s) 938
BstH2I RGCGCY 1 cut(s) 922
BstHHI GCGC 3 cut(s) 45, 136, 921
BstKTI GATC 5 cut(s) 229, 271, 508, 896, 1018
BstMAI GTCTC 1 cut(s) 418
BstMBI GATC 5 cut(s) 226, 268, 505, 893, 1015
BstMWI GCNNNNNNNGC 1 cut(s) 142
BstPI GGTNACC 1 cut(s) 92
BstSLI GKGCMC 2 cut(s) 669, 837
BstV1I GCAGC 1 cut(s) 1159
BstV2I GAAGAC 1 cut(s) 313
BstX2I RGATCY 1 cut(s) 1015
BstXI CCANNNNNNTGG 2 cut(s) 109, 418
BstYI RGATCY 1 cut(s) 1015
BsuRI GGCC 7 cut(s) 534, 619, 643, 667, 691, 715, 763
BtgI CCRYGG 2 cut(s) 1002, 1019
BtgZI GCGATG 1 cut(s) 226
BtrI CACGTC 1 cut(s) 947
BtsCI GGATG 1 cut(s) 938
BtsIMutI CAGTG 3 cut(s) 411, 692, 835
Cac8I GCNNGC 3 cut(s) 111, 190, 1114
CfoI GCGC 3 cut(s) 45, 136, 921
Cfr9I CCCGGG 4 cut(s) 655, 670, 679, 751
CsiI ACCWGGT 3 cut(s) 88, 550, 574
Csp6I GTAC 3 cut(s) 86, 379, 869
CviAII CATG 5 cut(s) 436, 872, 1003, 1020, 1044
CviQI GTAC 3 cut(s) 86, 379, 869
DdeI CTNAG 3 cut(s) 32, 207, 399
DpnI GATC 5 cut(s) 228, 270, 507, 895, 1017
DpnII GATC 5 cut(s) 226, 268, 505, 893, 1015
DriI GACNNNNNGTC 1 cut(s) 431
Eam1104I CTCTTC 2 cut(s) 11, 202
Eam1105I GACNNNNNGTC 1 cut(s) 431
EarI CTCTTC 2 cut(s) 11, 202
Ecl136II GAGCTC 1 cut(s) 473
Eco130I CCWWGG 3 cut(s) 281, 1002, 1019
Eco24I GRGCYC 3 cut(s) 147, 475, 669
Eco31I GGTCTC 1 cut(s) 418
Eco47I GGWCC 5 cut(s) 479, 737, 785, 977, 1137
Eco53kI GAGCTC 1 cut(s) 473
Eco57I CTGAAG 3 cut(s) 75, 183, 477
Eco88I CYCGRG 6 cut(s) 655, 670, 679, 703, 727, 751
Eco91I GGTNACC 1 cut(s) 92
EcoICRI GAGCTC 1 cut(s) 473
EcoNI CCTNNNNNAGG 1 cut(s) 300
EcoO109I RGGNCCY 1 cut(s) 666
EcoO65I GGTNACC 1 cut(s) 92
EcoT14I CCWWGG 3 cut(s) 281, 1002, 1019
EcoT22I ATGCAT 1 cut(s) 441
EcoT38I GRGCYC 3 cut(s) 147, 475, 669
ErhI CCWWGG 3 cut(s) 281, 1002, 1019
FaeI CATG 5 cut(s) 439, 875, 1006, 1023, 1047
FatI CATG 5 cut(s) 435, 871, 1002, 1019, 1043
FauI CCCGC 2 cut(s) 181, 945
FbaI TGATCA 1 cut(s) 226
Fnu4HI GCNGC 1 cut(s) 1173
FokI GGATG 1 cut(s) 945
FriOI GRGCYC 3 cut(s) 147, 475, 669
Fsp4HI GCNGC 1 cut(s) 1173
FspBI CTAG 3 cut(s) 47, 537, 891
GlaI GCGC 3 cut(s) 44, 135, 920
GluI GCNGC 1 cut(s) 1173
HaeII RGCGCY 1 cut(s) 922
HaeIII GGCC 7 cut(s) 534, 619, 643, 667, 691, 715, 763
HhaI GCGC 3 cut(s) 45, 136, 921
Hin1II CATG 5 cut(s) 439, 875, 1006, 1023, 1047
Hin6I GCGC 3 cut(s) 43, 134, 919
HinP1I GCGC 3 cut(s) 43, 134, 919
HindIII AAGCTT 2 cut(s) 57, 1050
HphI GGTGA 5 cut(s) 236, 278, 354, 433, 1026
Hpy166II GTNNAC 2 cut(s) 944, 1140
Hpy188I TCNGA 9 cut(s) 13, 82, 202, 231, 259, 351, 402, 961, 1123
Hpy188III TCNNGA 9 cut(s) 303, 463, 503, 513, 705, 729, 930, 980, 1069
Hpy8I GTNNAC 2 cut(s) 944, 1140
HpyAV CCTTC 4 cut(s) 165, 1066, 1099, 1118
HpyCH4III ACNGT 1 cut(s) 987
HpyCH4IV ACGT 1 cut(s) 946
HpyCH4V TGCA 1 cut(s) 439
HpyF10VI GCNNNNNNNGC 1 cut(s) 142
HpyF3I CTNAG 3 cut(s) 32, 207, 399
HpySE526I ACGT 1 cut(s) 946
Hsp92II CATG 5 cut(s) 439, 875, 1006, 1023, 1047
HspAI GCGC 3 cut(s) 43, 134, 919
Kpn2I TCCGGA 1 cut(s) 1068
Ksp22I TGATCA 1 cut(s) 226
Kzo9I GATC 5 cut(s) 226, 268, 505, 893, 1015
LmnI GCTCC 3 cut(s) 142, 157, 470
Lsp1109I GCAGC 1 cut(s) 1159
LweI GCATC 3 cut(s) 245, 448, 1211
MabI ACCWGGT 3 cut(s) 88, 550, 574
MaeI CTAG 3 cut(s) 47, 537, 891
MaeII ACGT 1 cut(s) 946
MaeIII GTNAC 5 cut(s) 92, 314, 1032, 1039, 1097
MalI GATC 5 cut(s) 228, 270, 507, 895, 1017
MboI GATC 5 cut(s) 226, 268, 505, 893, 1015
MboII GAAGA 6 cut(s) 28, 189, 263, 318, 1022, 1025
MflI RGATCY 1 cut(s) 1015
MhlI GDGCHC 5 cut(s) 147, 154, 475, 669, 837
MluCI AATT 2 cut(s) 355, 493
Mph1103I ATGCAT 1 cut(s) 441
MroI TCCGGA 1 cut(s) 1068
MseI TTAA 1 cut(s) 1194
MslI CAYNNNNRTG 1 cut(s) 416
MspA1I CMGCKG 1 cut(s) 109
Mva1269I GAATGC 1 cut(s) 330
MwoI GCNNNNNNNGC 1 cut(s) 142
NcoI CCATGG 2 cut(s) 1002, 1019
NdeII GATC 5 cut(s) 226, 268, 505, 893, 1015
NlaIII CATG 5 cut(s) 439, 875, 1006, 1023, 1047
NlaIV GGNNCC 5 cut(s) 144, 667, 668, 811, 978
NmeAIII GCCGAG 1 cut(s) 799
NmuCI GTSAC 1 cut(s) 1032
NsiI ATGCAT 1 cut(s) 441
NspV TTCGAA 1 cut(s) 1130
PasI CCCWGGG 1 cut(s) 800
PctI GAATGC 1 cut(s) 330
PkrI GCNGC 1 cut(s) 1174
PshBI ATTAAT 1 cut(s) 1194
PsiI TTATAA 1 cut(s) 492
Psp124BI GAGCTC 1 cut(s) 475
PspEI GGTNACC 1 cut(s) 92
PspN4I GGNNCC 5 cut(s) 144, 667, 668, 811, 978
PspOMI GGGCCC 1 cut(s) 665
PsuI RGATCY 1 cut(s) 1015
RsaI GTAC 3 cut(s) 87, 380, 870
RsaNI GTAC 3 cut(s) 86, 379, 869
RseI CAYNNNNRTG 1 cut(s) 416
SacI GAGCTC 1 cut(s) 475
SaqAI TTAA 1 cut(s) 1194
SatI GCNGC 1 cut(s) 1173
Sau3AI GATC 5 cut(s) 226, 268, 505, 893, 1015
SduI GDGCHC 5 cut(s) 147, 154, 475, 669, 837
SexAI ACCWGGT 3 cut(s) 88, 550, 574
SfaNI GCATC 3 cut(s) 245, 448, 1211
SfuI TTCGAA 1 cut(s) 1130
SinI GGWCC 5 cut(s) 479, 737, 785, 977, 1137
SmaI CCCGGG 4 cut(s) 657, 672, 681, 753
SmiMI CAYNNNNRTG 1 cut(s) 416
SmlI CTYRAG 2 cut(s) 474, 511
SmoI CTYRAG 2 cut(s) 474, 511
Sse9I AATT 2 cut(s) 355, 493
SsiI CCGC 3 cut(s) 107, 188, 952
SspMI CTAG 3 cut(s) 47, 537, 891
SstI GAGCTC 1 cut(s) 475
StyI CCWWGG 3 cut(s) 281, 1002, 1019
TaaI ACNGT 1 cut(s) 987
TaiI ACGT 1 cut(s) 949
TaqI TCGA 2 cut(s) 158, 1130
TasI AATT 2 cut(s) 355, 493
TatI WGTACW 1 cut(s) 868
Tru1I TTAA 1 cut(s) 1194
Tru9I TTAA 1 cut(s) 1194
TscAI CASTG 3 cut(s) 418, 699, 842
TseFI GTSAC 1 cut(s) 1032
TseI GCWGC 1 cut(s) 1172
Tsp45I GTSAC 1 cut(s) 1032
TspDTI ATGAA 1 cut(s) 1200
TspMI CCCGGG 4 cut(s) 655, 670, 679, 751
TspRI CASTG 3 cut(s) 418, 699, 842
VpaK11BI GGWCC 5 cut(s) 479, 737, 785, 977, 1137
VspI ATTAAT 1 cut(s) 1194
XagI CCTNNNNNAGG 1 cut(s) 300
XcmI CCANNNNNNNNNTGG 1 cut(s) 459
XmaI CCCGGG 4 cut(s) 655, 670, 679, 751
XspI CTAG 3 cut(s) 47, 537, 891
Zsp2I ATGCAT 1 cut(s) 441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.