Rh7CG468200

M-phase-specific PLK1-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0014057
Physical Location & Seq
Reverse (-)
62584481 .. 62587437
2957 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG468200.1

Sequence Viewer

Length: 843 bp
ATGCCTCGTCCACCTCATCAGTTTCAGAGCAATTACTCACCAGACCAGAGAATGTACCAACAAAACTTTGTTCCTCAGAGAAATCCCACAGGAATGGTGAGACCTTTTGTCATGCATCATACAAATCCACCTGAAGTCTGGAATGGAGCTCAAGGTCCGGCGAGTTATAATTTCCCTCCTGATCCCTCAAGAGAAAGCAGTTTTCCTGGCCCTAGATTTAGACCACCAGGTAGCCCCGGATTTAGACCACCAGGAAACCCTGGAATTGGGCCACCGGGAAGCCCCGGATTTGGGCCACCGGGAAGCCCGGGATTTGGGCCACCGGGAAGCCCGGGATTTGGACCACCGGGAAGCCCAGGATTTGGACCACCAGGAAGCCCCGGATTTGGGCCACCAGGAAGCCCTGGATTTGGACCACCCAGAAGCCCTGGGTTTGGTTCCAATACTCGGCAAGGTAGGGGGCACTGGGTCAGTCATAGTCCAAGCCCTCATTCAGTACATGGAGGTAGTCATAGTCCTAGATCAAGTTCAGGTAGAGGTAGGGGGCGCTCTGGGTCAGGATGGCGAGGTGGACGTGGGCGGGGTTCTGATGGTCGTCCATTGGGTCCAGAACAGTTTTACAATGCTTCCATGGTTGAAGAAGATCCATGGAAAGGTTTGTCACCTGTTACATGGAAAGCTTTGCCACCTGTTATCCGGAAAGGGGTAGATACTCCCTTCAATGGTAACAAAAATAAAGCAAGCGTTTCAGAAGGTTCAAACAGGTCCACTCCACAGCCAAACTTGGCAGAATACTTGGCTGCCTCATTGAATGAAACTATTAATGAGGCATCAACCTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000380 GO:0000381 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006810 GO:0006950 GO:0006970 GO:0007623 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009266 GO:0009409 GO:0009605 GO:0009628 GO:0009649 GO:0009651 GO:0009889 GO:0009892 GO:0009914 GO:0009926 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0010817 GO:0010866 GO:0010921 GO:0014070 GO:0016020 GO:0016070 GO:0016071 GO:0016246 GO:0016441 GO:0016458 GO:0016604 GO:0019216 GO:0019219 GO:0019220 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032879 GO:0033036 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0035303 GO:0040029 GO:0042221 GO:0042752 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0043484 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0046890 GO:0048024 GO:0048511 GO:0048519 GO:0050684 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051174 GO:0051179 GO:0051234 GO:0051252 GO:0051336 GO:0051716 GO:0060255 GO:0060918 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070887 GO:0070918 GO:0071071 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071944 GO:0080090 GO:0090207 GO:0090304 GO:1901360 GO:1901698 GO:1901699 GO:1901703 GO:1903311 GO:1903725 GO:1903730 GO:2000012
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MPLKIP

Protein Analysis

280

Amino Acids

29.31

Weight (kDa)

11.0

Isoelectric Point (pI)

66.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014057)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24500 AT4G24500 AT4G24500
fragaria_vesca FvH4_5g34870
malus_domestica MD08G1199700.v1.1
prunus_persica Prupe.1G533200_v2.0.a1
pyrus_communis pycom08g17330 pycom15g34700
rosa_chinensis RchiOBHm_Chr7g0235791
rosa_laevigata RLG00000001139
rosa_roxburghii Rroxscaffold_3G00225630
rosa_rugosa Rorug07G0292800
rosa_samantha Rh7AG447700 Rh7BG419900 Rh7CG468200 Rh7DG436700
rosa_wichuraiana Rw7G037200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 168
AccB7I CCANNNNNTGG 1 cut(s) 362
AccIII TCCGGA 1 cut(s) 696
AciI CCGC 1 cut(s) 580
AclWI GGATC 2 cut(s) 176, 638
AcuI CTGAAG 1 cut(s) 153
AfaI GTAC 2 cut(s) 56, 498
AgsI TTSAA 4 cut(s) 638, 721, 759, 811
AhdI GACNNNNNGTC 1 cut(s) 107
AjiI CACGTC 1 cut(s) 575
AjnI CCWGG 9 cut(s) 205, 226, 250, 259, 355, 370, 394, 403, 427
AjuI GAANNNNNNNTTGG 2 cut(s) 475, 507
AluBI AGCT 2 cut(s) 149, 680
AluI AGCT 2 cut(s) 149, 680
Alw21I GWGCWC 1 cut(s) 151
Alw26I GTCTC 1 cut(s) 94
AlwI GGATC 2 cut(s) 176, 638
Ama87I CYCGRG 2 cut(s) 307, 331
Aor13HI TCCGGA 1 cut(s) 696
AoxI GGCC 5 cut(s) 208, 269, 293, 317, 389
ApeKI GCWGC 1 cut(s) 800
AseI ATTAAT 1 cut(s) 822
AspLEI GCGC 1 cut(s) 549
AsuHPI GGTGA 3 cut(s) 30, 109, 654
AvaI CYCGRG 2 cut(s) 307, 331
AvaII GGWCC 6 cut(s) 155, 341, 365, 413, 605, 765
BaeGI GKGCMC 1 cut(s) 465
BanII GRGCYC 1 cut(s) 151
Bbv12I GWGCWC 1 cut(s) 151
BbvI GCAGC 1 cut(s) 787
BccI CCATC 2 cut(s) 555, 584
BcgI CGANNNNNNTGC 1 cut(s) 819
BciT130I CCWGG 9 cut(s) 207, 228, 252, 261, 357, 372, 396, 405, 429
BcoDI GTCTC 1 cut(s) 94
BfaI CTAG 2 cut(s) 213, 519
BfoI RGCGCY 1 cut(s) 550
BisI GCNGC 1 cut(s) 801
BlsI GCNGC 1 cut(s) 802
Bme18I GGWCC 6 cut(s) 155, 341, 365, 413, 605, 765
BmeRI GACNNNNNGTC 1 cut(s) 107
BmeT110I CYCGRG 2 cut(s) 307, 331
BmgBI CACGTC 1 cut(s) 575
BmiI GGNNCC 2 cut(s) 439, 606
BmrI ACTGGG 1 cut(s) 475
BmsI GCATC 2 cut(s) 124, 839
BmuI ACTGGG 1 cut(s) 475
BpuEI CTTGAG 2 cut(s) 135, 172
BsaI GGTCTC 1 cut(s) 94
BsaWI WCCGGW 1 cut(s) 696
Bse1I ACTGG 1 cut(s) 470
BseAI TCCGGA 1 cut(s) 696
BseBI CCWGG 9 cut(s) 207, 228, 252, 261, 357, 372, 396, 405, 429
BseGI GGATG 1 cut(s) 566
BseMII CTCAG 1 cut(s) 89
BseNI ACTGG 1 cut(s) 470
BseSI GKGCMC 1 cut(s) 465
BseXI GCAGC 1 cut(s) 787
BshFI GGCC 5 cut(s) 210, 271, 295, 319, 391
BsiHKAI GWGCWC 1 cut(s) 151
BsiHKCI CYCGRG 2 cut(s) 307, 331
BsmAI GTCTC 1 cut(s) 94
BsnI GGCC 5 cut(s) 210, 271, 295, 319, 391
Bso31I GGTCTC 1 cut(s) 94
BsoBI CYCGRG 2 cut(s) 307, 331
Bsp1286I GDGCHC 2 cut(s) 151, 465
Bsp13I TCCGGA 1 cut(s) 696
Bsp143I GATC 3 cut(s) 181, 521, 643
Bsp19I CCATGG 2 cut(s) 630, 647
BspACI CCGC 1 cut(s) 580
BspANI GGCC 5 cut(s) 210, 271, 295, 319, 391
BspCNI CTCAG 1 cut(s) 88
BspEI TCCGGA 1 cut(s) 696
BspLI GGNNCC 2 cut(s) 439, 606
BspPI GGATC 2 cut(s) 176, 638
BspTNI GGTCTC 1 cut(s) 94
BsrI ACTGG 1 cut(s) 470
BssMI GATC 3 cut(s) 181, 521, 643
BssT1I CCWWGG 2 cut(s) 630, 647
Bst2UI CCWGG 9 cut(s) 207, 228, 252, 261, 357, 372, 396, 405, 429
Bst4CI ACNGT 1 cut(s) 615
BstC8I GCNNGC 1 cut(s) 742
BstDEI CTNAG 1 cut(s) 75
BstDSI CCRYGG 2 cut(s) 630, 647
BstF5I GGATG 1 cut(s) 566
BstH2I RGCGCY 1 cut(s) 550
BstHHI GCGC 1 cut(s) 549
BstKTI GATC 3 cut(s) 184, 524, 646
BstMAI GTCTC 1 cut(s) 94
BstMBI GATC 3 cut(s) 181, 521, 643
BstNI CCWGG 9 cut(s) 207, 228, 252, 261, 357, 372, 396, 405, 429
BstSLI GKGCMC 1 cut(s) 465
BstV1I GCAGC 1 cut(s) 787
BstX2I RGATCY 1 cut(s) 643
BstXI CCANNNNNNTGG 1 cut(s) 94
BstYI RGATCY 1 cut(s) 643
BsuRI GGCC 5 cut(s) 210, 271, 295, 319, 391
BtgI CCRYGG 2 cut(s) 630, 647
BtrI CACGTC 1 cut(s) 575
BtsCI GGATG 1 cut(s) 566
BtsIMutI CAGTG 1 cut(s) 463
Cac8I GCNNGC 1 cut(s) 742
CfoI GCGC 1 cut(s) 549
Cfr9I CCCGGG 2 cut(s) 307, 331
CsiI ACCWGGT 1 cut(s) 226
Csp6I GTAC 2 cut(s) 55, 497
CviAII CATG 5 cut(s) 112, 500, 631, 648, 672
CviQI GTAC 2 cut(s) 55, 497
DdeI CTNAG 1 cut(s) 75
DpnI GATC 3 cut(s) 183, 523, 645
DpnII GATC 3 cut(s) 181, 521, 643
DriI GACNNNNNGTC 1 cut(s) 107
Eam1105I GACNNNNNGTC 1 cut(s) 107
Ecl136II GAGCTC 1 cut(s) 149
Eco130I CCWWGG 2 cut(s) 630, 647
Eco24I GRGCYC 1 cut(s) 151
Eco31I GGTCTC 1 cut(s) 94
Eco47I GGWCC 6 cut(s) 155, 341, 365, 413, 605, 765
Eco53kI GAGCTC 1 cut(s) 149
Eco57I CTGAAG 1 cut(s) 153
Eco88I CYCGRG 2 cut(s) 307, 331
EcoICRI GAGCTC 1 cut(s) 149
EcoRII CCWGG 9 cut(s) 205, 226, 250, 259, 355, 370, 394, 403, 427
EcoT14I CCWWGG 2 cut(s) 630, 647
EcoT22I ATGCAT 1 cut(s) 117
EcoT38I GRGCYC 1 cut(s) 151
ErhI CCWWGG 2 cut(s) 630, 647
FaeI CATG 5 cut(s) 115, 503, 634, 651, 675
FaiI YATR 9 cut(s) 113, 120, 168, 477, 501, 513, 632, 649, 673
FatI CATG 5 cut(s) 111, 499, 630, 647, 671
FauI CCCGC 1 cut(s) 573
Fnu4HI GCNGC 1 cut(s) 801
FokI GGATG 1 cut(s) 573
FriOI GRGCYC 1 cut(s) 151
Fsp4HI GCNGC 1 cut(s) 801
FspBI CTAG 2 cut(s) 213, 519
GlaI GCGC 1 cut(s) 548
GluI GCNGC 1 cut(s) 801
HaeII RGCGCY 1 cut(s) 550
HaeIII GGCC 5 cut(s) 210, 271, 295, 319, 391
HhaI GCGC 1 cut(s) 549
Hin1II CATG 5 cut(s) 115, 503, 634, 651, 675
Hin6I GCGC 1 cut(s) 547
HinP1I GCGC 1 cut(s) 547
HindIII AAGCTT 1 cut(s) 678
HphI GGTGA 3 cut(s) 30, 109, 654
Hpy166II GTNNAC 3 cut(s) 11, 572, 768
Hpy188I TCNGA 4 cut(s) 27, 78, 589, 751
Hpy188III TCNNGA 6 cut(s) 139, 179, 189, 558, 608, 697
Hpy8I GTNNAC 3 cut(s) 11, 572, 768
HpyAV CCTTC 2 cut(s) 727, 746
HpyCH4III ACNGT 1 cut(s) 615
HpyCH4IV ACGT 1 cut(s) 574
HpyCH4V TGCA 1 cut(s) 115
HpyF3I CTNAG 1 cut(s) 75
HpySE526I ACGT 1 cut(s) 574
Hsp92II CATG 5 cut(s) 115, 503, 634, 651, 675
HspAI GCGC 1 cut(s) 547
Kpn2I TCCGGA 1 cut(s) 696
Kzo9I GATC 3 cut(s) 181, 521, 643
LmnI GCTCC 1 cut(s) 146
Lsp1109I GCAGC 1 cut(s) 787
LweI GCATC 2 cut(s) 124, 839
MabI ACCWGGT 1 cut(s) 226
MaeI CTAG 2 cut(s) 213, 519
MaeII ACGT 1 cut(s) 574
MaeIII GTNAC 3 cut(s) 660, 667, 725
MalI GATC 3 cut(s) 183, 523, 645
MboI GATC 3 cut(s) 181, 521, 643
MboII GAAGA 2 cut(s) 650, 653
MflI RGATCY 1 cut(s) 643
MhlI GDGCHC 2 cut(s) 151, 465
MluCI AATT 3 cut(s) 31, 169, 264
Mph1103I ATGCAT 1 cut(s) 117
MroI TCCGGA 1 cut(s) 696
MseI TTAA 1 cut(s) 822
MslI CAYNNNNRTG 1 cut(s) 92
MvaI CCWGG 9 cut(s) 207, 228, 252, 261, 357, 372, 396, 405, 429
NcoI CCATGG 2 cut(s) 630, 647
NdeII GATC 3 cut(s) 181, 521, 643
NlaIII CATG 5 cut(s) 115, 503, 634, 651, 675
NlaIV GGNNCC 2 cut(s) 439, 606
NmeAIII GCCGAG 1 cut(s) 427
NmuCI GTSAC 1 cut(s) 660
NsiI ATGCAT 1 cut(s) 117
PasI CCCWGGG 1 cut(s) 428
PflMI CCANNNNNTGG 1 cut(s) 362
PkrI GCNGC 1 cut(s) 802
PshBI ATTAAT 1 cut(s) 822
PsiI TTATAA 1 cut(s) 168
Psp124BI GAGCTC 1 cut(s) 151
Psp6I CCWGG 9 cut(s) 205, 226, 250, 259, 355, 370, 394, 403, 427
PspGI CCWGG 9 cut(s) 205, 226, 250, 259, 355, 370, 394, 403, 427
PspN4I GGNNCC 2 cut(s) 439, 606
PsuI RGATCY 1 cut(s) 643
RsaI GTAC 2 cut(s) 56, 498
RsaNI GTAC 2 cut(s) 55, 497
RseI CAYNNNNRTG 1 cut(s) 92
SacI GAGCTC 1 cut(s) 151
SaqAI TTAA 1 cut(s) 822
SatI GCNGC 1 cut(s) 801
Sau3AI GATC 3 cut(s) 181, 521, 643
SduI GDGCHC 2 cut(s) 151, 465
SexAI ACCWGGT 1 cut(s) 226
SfaNI GCATC 2 cut(s) 124, 839
SinI GGWCC 6 cut(s) 155, 341, 365, 413, 605, 765
SmaI CCCGGG 2 cut(s) 309, 333
SmiMI CAYNNNNRTG 1 cut(s) 92
SmlI CTYRAG 2 cut(s) 150, 187
SmoI CTYRAG 2 cut(s) 150, 187
Sse9I AATT 3 cut(s) 31, 169, 264
SsiI CCGC 1 cut(s) 580
SspMI CTAG 2 cut(s) 213, 519
SstI GAGCTC 1 cut(s) 151
StyI CCWWGG 2 cut(s) 630, 647
TaaI ACNGT 1 cut(s) 615
TaiI ACGT 1 cut(s) 577
TasI AATT 3 cut(s) 31, 169, 264
TatI WGTACW 1 cut(s) 496
Tru1I TTAA 1 cut(s) 822
Tru9I TTAA 1 cut(s) 822
TscAI CASTG 1 cut(s) 470
TseFI GTSAC 1 cut(s) 660
TseI GCWGC 1 cut(s) 800
Tsp45I GTSAC 1 cut(s) 660
TspDTI ATGAA 1 cut(s) 828
TspMI CCCGGG 2 cut(s) 307, 331
TspRI CASTG 1 cut(s) 470
Van91I CCANNNNNTGG 1 cut(s) 362
VpaK11BI GGWCC 6 cut(s) 155, 341, 365, 413, 605, 765
VspI ATTAAT 1 cut(s) 822
XcmI CCANNNNNNNNNTGG 1 cut(s) 135
XmaI CCCGGG 2 cut(s) 307, 331
XspI CTAG 2 cut(s) 213, 519
Zsp2I ATGCAT 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.