Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003643

Physical Location & Seq

Genomic Coordinates Reverse (-)

26344700 .. 26352262

Gene Structure 7563 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g35940.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGTGGTCATCATCCTTACGCAGAACCTCAAATATGAAATGTCTCTTCATCTCAGCCCAACAATCACTCTCACCCTCTCCCAAACTCATTTGTAACCCTCACGTCACTCCTTCTCCTTCTCCTCCTCTCTTCTCCTCGGCTTCTTTTCTCCAACCAATCAAGAGCCCTGCAATTTGTGCGTTTGGTTCAAAGCCCAGAAGCTATTTCGTACGAGCACTTCACACCATGCAAAACCGAGAAGCCATTTCGTACCTGACGCAGAGCCAAGCTGCTGAGATCGATGAGATTCTCATGGGTCCTCTGGGTTTCAGTGTGGACCAGTTGATGGAATTGGCTGGTTTGAGCGTGGCCACTTCAATAGCAGAGGTCTATAAACCAAGCGAGTATAATCGTGTCCTCACGATTTGTGGCCCTGGAAACAATGGCGGTGATGGTCTTGTGGCTGCTCGTCACCTGCATCACTTTGGATATAAGCCATTTATCTGTTATCCAAAGCGTACTGCTAAGCCTCTTTATACTGGTCTGGTCACTCAACTGGAATCACTGTCAGTCCCTTTCATATCTGTAGAAGATCTGCCTTTGGACTTGTCAAAGGACTTTGACATAGTTGTAGATGCAATGTTTGGGTTTTCATTCCATGGTGCTCCAAGGCCCCCTTTTGATAATCTGATACAAAAGCTTATTTGTATCAATCAATATGATCAGACACGCCAAAAGTCCTGTGTCGTTGTCTCCATAGATATCCCATCCGGGTGGCAGGTTGAAGGAGATGGTGGTCCGGAAGGCATTCAGCCCGACATGTTGGTTTCTCTGACTGCTCCAAAGTTGTGTGCGAAGAACTTTTGTGGTCCACACCATTTTCTGGGTGGTCGATTTGTCCCACCATCTATTGCTGATAAATTTAAGCTTCGTCTTCCCCCATATCCAGGCACTTCTATGTGTGTACGAATTGGAAAGCCTCCGCAAGTTGAAATTTCTGCTCTAAGAGAGAACTATATTTCTCCTGAGTTTCTTGAGGAACAGGTGGAGGCTGATCCCTTTGATCAGTTCCGCCAATGGTTTGACGATGTAGTGGCTGCTGGCTTAAGGGAACCAAACGCGATGGCCTTATCAACCGCTTGCAAGGATGGAAAACCCTCATCACGAATGGTATTGCTGAAAGGATTTGATAAGAACGGTTTTGTCTGGTATACCAATTATGAAAGTCGAAAGGCACAGGAATTGTTTGAAAATCCTCATGCATCTCTTCTTTTCTATTGGGATGGTCTGAATCGTCAGGTGAGAGTGGAAGGATCTGTGCAGAAAGTTTCTGAGGAGGAATCTAACCAGTACTTCCATAGCCGCCCTCGAGGAAGTCAGATTGGAGCAATAGTTAGCAAGCAGAGTACTATAGTTTCTGGAAGGCATGTTCTCTACAACCAATATAAAGAACTAGAGGAAAAATTCTCAGATGGAAGTTTAATTCCTAAACCTAAGAACTGGGGTGGATACAGACTTAAGCCAGAGATGTTTGAATTTTGGCAAGGTCAAAAATCTCGCTTGCACGACAGGCTGCGATATTCTCCTCGGGAGATCAATGGACAACGAGTATGGAAAATTGAGCGATTGGCTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004733 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006081 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006734 GO:0006739 GO:0006753 GO:0006766 GO:0006767 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009987 GO:0016491 GO:0016638 GO:0016641 GO:0016853 GO:0016854 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0031974 GO:0031981 GO:0034356 GO:0034641 GO:0034654 GO:0042364 GO:0042816 GO:0042819 GO:0042822 GO:0042823 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046184 GO:0046483 GO:0046496 GO:0051186 GO:0051188 GO:0052856 GO:0052857 GO:0055086 GO:0055114 GO:0070013 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00750 ko01100 ko01120 map00750 map01100 map01120

Pfam Domains

Protein Families

PNP_phzG_C Putative_PNPOx YjeF_N

Protein Analysis

539

Amino Acids

60.45

Weight (kDa)

8.61

Isoelectric Point (pI)

40.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YjeF_N	PF03853	106 - 277	1.7e-33	YjeF-related protein N-terminus
Pyridox_oxase_2	PF12766	352 - 434	1.7e-06	Pyridoxamine 5'-phosphate oxidase
PNPOx_N	PF01243	355 - 477	1.9e-27	Pyridoxamine 5'-phosphate oxidase
PNP_phzG_C	PF10590	494 - 538	1.4e-19	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49970 AT5G49970
fragaria_vesca	FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940
malus_domestica	MD08G1191800.v1.1 MD15G1380600.v1.1
prunus_persica	Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1
pyrus_communis	pycom08g16530 pycom15g34090
rosa_chinensis	RchiOBHm_Chr7g0237681
rosa_laevigata	RLG00000000977
rosa_multiflora	Rmu_co8471315.1_g000001 Rmu_sc0007826.1_g000003
rosa_roxburghii	Rroxscaffold_3G00223890
rosa_rugosa	Rorug07G0306200 Rorug07G0306300 Rorug07G0306400 Rorug07G0306500
rosa_samantha	Rh7AG462900 Rh7BG433000 Rh7CG479900 Rh7DG448900
rosa_wichuraiana	Rw7G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	462
AbsI	CCTCGAGG	1 cut(s)	1347
Acc36I	ACCTGC	2 cut(s)	462, 748
AccB7I	CCANNNNNTGG	2 cut(s)	325, 862
AccI	GTMKAC	1 cut(s)	1190
AccII	CGCG	1 cut(s)	1100
AccIII	TCCGGA	1 cut(s)	778
AciI	CCGC	5 cut(s)	426, 962, 1051, 1116, 1342
AclWI	GGATC	2 cut(s)	1028, 1300
AcoI	YGGCCR	1 cut(s)	348
AcsI	RAATTY	4 cut(s)	899, 972, 1442, 1514
AfaI	GTAC	6 cut(s)	210, 251, 499, 945, 1331, 1387
AfiI	CCNNNNNNNGG	3 cut(s)	325, 862, 926
AflII	CTTAAG	2 cut(s)	1084, 1496
AflIII	ACRYGT	1 cut(s)	798
AgsI	TTSAA	6 cut(s)	189, 357, 764, 971, 1229, 1514
AjiI	CACGTC	1 cut(s)	103
AjnI	CCWGG	2 cut(s)	412, 925
AloI	GAACNNNNNNTCC	2 cut(s)	1392, 1424
AluBI	AGCT	4 cut(s)	201, 269, 679, 907
AluI	AGCT	4 cut(s)	201, 269, 679, 907
Alw21I	GWGCWC	2 cut(s)	217, 646
Alw26I	GTCTC	2 cut(s)	47, 736
AlwI	GGATC	2 cut(s)	1028, 1300
Ama87I	CYCGRG	2 cut(s)	1347, 1566
Aor13HI	TCCGGA	1 cut(s)	778
AoxI	GGCC	4 cut(s)	348, 409, 650, 1104
ApeKI	GCWGC	4 cut(s)	269, 443, 1076, 1552
ApoI	RAATTY	4 cut(s)	899, 972, 1442, 1514
Asp700I	GAANNNNTTC	1 cut(s)	786
AspS9I	GGNCC	6 cut(s)	296, 316, 410, 651, 776, 848
AsuC2I	CCSGG	1 cut(s)	751
AsuHPI	GGTGA	4 cut(s)	63, 440, 443, 1291
AvaI	CYCGRG	2 cut(s)	1347, 1566
AvaII	GGWCC	4 cut(s)	296, 316, 776, 848
BalI	TGGCCA	1 cut(s)	350
BanII	GRGCYC	1 cut(s)	167
BarI	GAAGNNNNNNTAC	2 cut(s)	201, 233
BbsI	GAAGAC	1 cut(s)	905
Bbv12I	GWGCWC	2 cut(s)	217, 646
BbvI	GCAGC	4 cut(s)	256, 430, 1063, 1539
BccI	CCATC	9 cut(s)	319, 425, 754, 764, 892, 1096, 1121, 1256, 1445
BciT130I	CCWGG	2 cut(s)	414, 927
BciVI	GTATCC	1 cut(s)	1481
BclI	TGATCA	2 cut(s)	700, 1042
BcnI	CCSGG	1 cut(s)	751
BcoDI	GTCTC	2 cut(s)	47, 736
BfaI	CTAG	1 cut(s)	1433
BfmI	CTRYAG	2 cut(s)	564, 1389
BfrI	CTTAAG	2 cut(s)	1084, 1496
BfuAI	ACCTGC	2 cut(s)	462, 748
BfuI	GTATCC	1 cut(s)	1481
BglII	AGATCT	1 cut(s)	571
BisI	GCNGC	5 cut(s)	270, 444, 1077, 1342, 1553
BlpI	GCTNAGC	1 cut(s)	504
BlsI	GCNGC	5 cut(s)	271, 445, 1078, 1343, 1554
BmcAI	AGTACT	2 cut(s)	1331, 1387
Bme1390I	CCNGG	3 cut(s)	414, 751, 927
Bme18I	GGWCC	4 cut(s)	296, 316, 776, 848
BmeT110I	CYCGRG	2 cut(s)	1347, 1566
BmgBI	CACGTC	1 cut(s)	103
BmgT120I	GGNCC	6 cut(s)	296, 316, 410, 651, 776, 848
BmiI	GGNNCC	4 cut(s)	297, 653, 1092, 1611
BmrFI	CCNGG	3 cut(s)	414, 751, 927
BmrI	ACTGGG	1 cut(s)	1489
BmsI	GCATC	3 cut(s)	466, 604, 1250
BmuI	ACTGGG	1 cut(s)	1489
BpiI	GAAGAC	1 cut(s)	905
Bpu1102I	GCTNAGC	1 cut(s)	504
BpuEI	CTTGAG	1 cut(s)	1034
BpuMI	CCSGG	1 cut(s)	751
Bsa29I	ATCGAT	1 cut(s)	279
BsaJI	CCNNGG	5 cut(s)	135, 412, 637, 647, 1565
BsaWI	WCCGGW	1 cut(s)	778
BsaXI	ACNNNNNCTCC	4 cut(s)	97, 127, 1356, 1386
Bsc4I	CCNNNNNNNGG	3 cut(s)	325, 862, 926
Bse1I	ACTGG	5 cut(s)	319, 523, 540, 1327, 1484
Bse3DI	GCAATG	1 cut(s)	624
BseAI	TCCGGA	1 cut(s)	778
BseBI	CCWGG	2 cut(s)	414, 927
BseCI	ATCGAT	1 cut(s)	279
BseDI	CCNNGG	5 cut(s)	135, 412, 637, 647, 1565
BseGI	GGATG	4 cut(s)	11, 746, 1132, 1267
BseLI	CCNNNNNNNGG	3 cut(s)	325, 862, 926
BseMI	GCAATG	1 cut(s)	624
BseMII	CTCAG	5 cut(s)	66, 264, 996, 1302, 1461
BseNI	ACTGG	5 cut(s)	319, 523, 540, 1327, 1484
BseRI	GAGGAG	5 cut(s)	111, 114, 124, 1328, 1554
BseXI	GCAGC	4 cut(s)	256, 430, 1063, 1539
BsgI	GTGCAG	1 cut(s)	1319
Bsh1236I	CGCG	1 cut(s)	1100
BshFI	GGCC	4 cut(s)	350, 411, 652, 1106
BshVI	ATCGAT	1 cut(s)	279
BsiHKAI	GWGCWC	2 cut(s)	217, 646
BsiHKCI	CYCGRG	2 cut(s)	1347, 1566
BsiSI	CCGG	2 cut(s)	750, 779
BsiWI	CGTACG	1 cut(s)	208
BslFI	GGGAC	2 cut(s)	536, 863
BslI	CCNNNNNNNGG	3 cut(s)	325, 862, 926
BsmAI	GTCTC	2 cut(s)	47, 736
BsmFI	GGGAC	2 cut(s)	536, 863
BsmI	GAATGC	1 cut(s)	786
BsnI	GGCC	4 cut(s)	350, 411, 652, 1106
BsoBI	CYCGRG	2 cut(s)	1347, 1566
Bsp1286I	GDGCHC	3 cut(s)	167, 217, 646
Bsp13I	TCCGGA	1 cut(s)	778
Bsp143I	GATC	7 cut(s)	276, 571, 700, 1033, 1042, 1292, 1572
Bsp1720I	GCTNAGC	1 cut(s)	504
Bsp19I	CCATGG	1 cut(s)	637
BspACI	CCGC	5 cut(s)	426, 962, 1051, 1116, 1342
BspANI	GGCC	4 cut(s)	350, 411, 652, 1106
BspCNI	CTCAG	5 cut(s)	65, 265, 997, 1303, 1460
BspDI	ATCGAT	1 cut(s)	279
BspEI	TCCGGA	1 cut(s)	778
BspFNI	CGCG	1 cut(s)	1100
BspLI	GGNNCC	4 cut(s)	297, 653, 1092, 1611
BspMI	ACCTGC	2 cut(s)	462, 748
BspPI	GGATC	2 cut(s)	1028, 1300
BspTI	CTTAAG	2 cut(s)	1084, 1496
BsrDI	GCAATG	1 cut(s)	624
BsrI	ACTGG	5 cut(s)	319, 523, 540, 1327, 1484
BssECI	CCNNGG	5 cut(s)	135, 412, 637, 647, 1565
BssMI	GATC	7 cut(s)	276, 571, 700, 1033, 1042, 1292, 1572
BssNAI	GTATAC	1 cut(s)	1191
BssT1I	CCWWGG	2 cut(s)	637, 647
Bst1107I	GTATAC	1 cut(s)	1191
Bst2UI	CCWGG	2 cut(s)	414, 927
Bst4CI	ACNGT	2 cut(s)	546, 1178
Bst6I	CTCTTC	3 cut(s)	50, 134, 1251
BstAFI	CTTAAG	2 cut(s)	1084, 1496
BstAPI	GCANNNNNTGC	1 cut(s)	176
BstC8I	GCNNGC	4 cut(s)	1081, 1120, 1379, 1541
BstDEI	CTNAG	8 cut(s)	52, 273, 504, 983, 1005, 1311, 1447, 1473
BstDSI	CCRYGG	1 cut(s)	637
BstF5I	GGATG	4 cut(s)	11, 746, 1132, 1267
BstFNI	CGCG	1 cut(s)	1100
BstKTI	GATC	7 cut(s)	279, 574, 703, 1036, 1045, 1295, 1575
BstMAI	GTCTC	2 cut(s)	47, 736
BstMBI	GATC	7 cut(s)	276, 571, 700, 1033, 1042, 1292, 1572
BstMWI	GCNNNNNNNGC	2 cut(s)	176, 1549
BstNI	CCWGG	2 cut(s)	414, 927
BstNSI	RCATGY	2 cut(s)	802, 1409
BstSCI	CCNGG	3 cut(s)	412, 749, 925
BstSFI	CTRYAG	2 cut(s)	564, 1389
BstUI	CGCG	1 cut(s)	1100
BstV1I	GCAGC	4 cut(s)	256, 430, 1063, 1539
BstV2I	GAAGAC	1 cut(s)	905
BstX2I	RGATCY	2 cut(s)	571, 1292
BstXI	CCANNNNNNTGG	1 cut(s)	753
BstYI	RGATCY	2 cut(s)	571, 1292
BstZ17I	GTATAC	1 cut(s)	1191
Bsu15I	ATCGAT	1 cut(s)	279
BsuI	GTATCC	1 cut(s)	1481
BsuRI	GGCC	4 cut(s)	350, 411, 652, 1106
BsuTUI	ATCGAT	1 cut(s)	279
BtgI	CCRYGG	1 cut(s)	637
BtgZI	GCGATG	1 cut(s)	1115
BtrI	CACGTC	1 cut(s)	103
BtsCI	GGATG	4 cut(s)	11, 746, 1132, 1267
BtsIMutI	CAGTG	2 cut(s)	316, 542
BveI	ACCTGC	2 cut(s)	462, 748
Cac8I	GCNNGC	4 cut(s)	1081, 1120, 1379, 1541
Cfr13I	GGNCC	6 cut(s)	296, 316, 410, 651, 776, 848
ClaI	ATCGAT	1 cut(s)	279
CseI	GACGC	1 cut(s)	265
Csp6I	GTAC	6 cut(s)	209, 250, 498, 944, 1330, 1386
CviAII	CATG	6 cut(s)	226, 292, 638, 799, 1238, 1406
CviQI	GTAC	6 cut(s)	209, 250, 498, 944, 1330, 1386
DdeI	CTNAG	8 cut(s)	52, 273, 504, 983, 1005, 1311, 1447, 1473
DpnI	GATC	7 cut(s)	278, 573, 702, 1035, 1044, 1294, 1574
DpnII	GATC	7 cut(s)	276, 571, 700, 1033, 1042, 1292, 1572
EaeI	YGGCCR	1 cut(s)	348
Eam1104I	CTCTTC	3 cut(s)	50, 134, 1251
EarI	CTCTTC	3 cut(s)	50, 134, 1251
EciI	GGCGGA	1 cut(s)	1040
Eco130I	CCWWGG	2 cut(s)	637, 647
Eco24I	GRGCYC	1 cut(s)	167
Eco32I	GATATC	1 cut(s)	742
Eco47I	GGWCC	4 cut(s)	296, 316, 776, 848
Eco88I	CYCGRG	2 cut(s)	1347, 1566
EcoO109I	RGGNCCY	2 cut(s)	296, 651
EcoRII	CCWGG	2 cut(s)	412, 925
EcoRV	GATATC	1 cut(s)	742
EcoT14I	CCWWGG	2 cut(s)	637, 647
EcoT22I	ATGCAT	1 cut(s)	1243
EcoT38I	GRGCYC	1 cut(s)	167
ErhI	CCWWGG	2 cut(s)	637, 647
FaeI	CATG	6 cut(s)	229, 295, 641, 802, 1241, 1409
FalI	AAGNNNNNCTT	2 cut(s)	640, 672
FaqI	GGGAC	2 cut(s)	536, 863
FatI	CATG	6 cut(s)	225, 291, 637, 798, 1237, 1405
FbaI	TGATCA	2 cut(s)	700, 1042
FblI	GTMKAC	1 cut(s)	1190
Fnu4HI	GCNGC	5 cut(s)	270, 444, 1077, 1342, 1553
FokI	GGATG	3 cut(s)	733, 1139, 1274
FriOI	GRGCYC	1 cut(s)	167
Fsp4HI	GCNGC	5 cut(s)	270, 444, 1077, 1342, 1553
FspBI	CTAG	1 cut(s)	1433
GluI	GCNGC	5 cut(s)	270, 444, 1077, 1342, 1553
HaeIII	GGCC	4 cut(s)	350, 411, 652, 1106
HapII	CCGG	2 cut(s)	750, 779
HgaI	GACGC	1 cut(s)	265
Hin1II	CATG	6 cut(s)	229, 295, 641, 802, 1241, 1409
HindIII	AAGCTT	2 cut(s)	677, 905
HinfI	GANTC	4 cut(s)	286, 539, 1270, 1319
HpaII	CCGG	2 cut(s)	750, 779
HphI	GGTGA	4 cut(s)	63, 440, 443, 1291
Hpy166II	GTNNAC	4 cut(s)	316, 851, 944, 1191
Hpy188I	TCNGA	7 cut(s)	669, 705, 813, 1269, 1312, 1359, 1450
Hpy188III	TCNNGA	8 cut(s)	160, 400, 779, 1004, 1013, 1143, 1398, 1568
Hpy8I	GTNNAC	4 cut(s)	316, 851, 944, 1191
HpyAV	CCTTC	6 cut(s)	120, 126, 758, 776, 1283, 1395
HpyCH4III	ACNGT	2 cut(s)	546, 1178
HpyCH4IV	ACGT	1 cut(s)	102
HpyCH4V	TGCA	8 cut(s)	170, 229, 457, 617, 1122, 1241, 1300, 1543
HpyF10VI	GCNNNNNNNGC	2 cut(s)	176, 1549
HpyF3I	CTNAG	8 cut(s)	52, 273, 504, 983, 1005, 1311, 1447, 1473
HpySE526I	ACGT	1 cut(s)	102
Hsp92II	CATG	6 cut(s)	229, 295, 641, 802, 1241, 1409
Kpn2I	TCCGGA	1 cut(s)	778
Ksp22I	TGATCA	2 cut(s)	700, 1042
Kzo9I	GATC	7 cut(s)	276, 571, 700, 1033, 1042, 1292, 1572
LmnI	GCTCC	4 cut(s)	649, 823, 1364, 1615
Lsp1109I	GCAGC	4 cut(s)	256, 430, 1063, 1539
LweI	GCATC	3 cut(s)	466, 604, 1250
MaeI	CTAG	1 cut(s)	1433
MaeII	ACGT	1 cut(s)	102
MaeIII	GTNAC	4 cut(s)	92, 103, 449, 526
MalI	GATC	7 cut(s)	278, 573, 702, 1035, 1044, 1294, 1574
MboI	GATC	7 cut(s)	276, 571, 700, 1033, 1042, 1292, 1572
MboII	GAAGA	6 cut(s)	37, 121, 581, 847, 905, 1238
MflI	RGATCY	2 cut(s)	571, 1292
MhlI	GDGCHC	3 cut(s)	167, 217, 646
MlsI	TGGCCA	1 cut(s)	350
MluNI	TGGCCA	1 cut(s)	350
MmeI	TCCRAC	1 cut(s)	175
Mox20I	TGGCCA	1 cut(s)	350
Mph1103I	ATGCAT	1 cut(s)	1243
MroI	TCCGGA	1 cut(s)	778
MroXI	GAANNNNTTC	1 cut(s)	786
MscI	TGGCCA	1 cut(s)	350
MseI	TTAA	4 cut(s)	903, 1085, 1460, 1497
MslI	CAYNNNNRTG	2 cut(s)	751, 935
Msp20I	TGGCCA	1 cut(s)	350
MspCI	CTTAAG	2 cut(s)	1084, 1496
MspI	CCGG	2 cut(s)	750, 779
MspR9I	CCNGG	3 cut(s)	414, 751, 927
Mva1269I	GAATGC	1 cut(s)	786
MvaI	CCWGG	2 cut(s)	414, 927
MvnI	CGCG	1 cut(s)	1100
MwoI	GCNNNNNNNGC	2 cut(s)	176, 1549
NciI	CCSGG	1 cut(s)	751
NcoI	CCATGG	1 cut(s)	637
NdeII	GATC	7 cut(s)	276, 571, 700, 1033, 1042, 1292, 1572
NlaIII	CATG	6 cut(s)	229, 295, 641, 802, 1241, 1409
NlaIV	GGNNCC	4 cut(s)	297, 653, 1092, 1611
NmeAIII	GCCGAG	1 cut(s)	116
NmuCI	GTSAC	3 cut(s)	103, 449, 526
NsiI	ATGCAT	1 cut(s)	1243
NspI	RCATGY	2 cut(s)	802, 1409
PaeR7I	CTCGAG	1 cut(s)	1347
PaqCI	CACCTGC	1 cut(s)	462
PciI	ACATGT	1 cut(s)	798
PctI	GAATGC	1 cut(s)	786
PdmI	GAANNNNTTC	1 cut(s)	786
PfeI	GAWTC	4 cut(s)	286, 539, 1270, 1319
Pfl23II	CGTACG	1 cut(s)	208
PflMI	CCANNNNNTGG	2 cut(s)	325, 862
PkrI	GCNGC	5 cut(s)	271, 445, 1078, 1343, 1554
PpuMI	RGGWCCY	1 cut(s)	296
PscI	ACATGT	1 cut(s)	798
Psp5II	RGGWCCY	1 cut(s)	296
Psp6I	CCWGG	2 cut(s)	412, 925
PspGI	CCWGG	2 cut(s)	412, 925
PspLI	CGTACG	1 cut(s)	208
PspN4I	GGNNCC	4 cut(s)	297, 653, 1092, 1611
PspPI	GGNCC	6 cut(s)	296, 316, 410, 651, 776, 848
PspPPI	RGGWCCY	1 cut(s)	296
PspXI	VCTCGAGB	1 cut(s)	1347
PsuI	RGATCY	2 cut(s)	571, 1292
RsaI	GTAC	6 cut(s)	210, 251, 499, 945, 1331, 1387
RsaNI	GTAC	6 cut(s)	209, 250, 498, 944, 1330, 1386
RseI	CAYNNNNRTG	2 cut(s)	751, 935
SaqAI	TTAA	4 cut(s)	903, 1085, 1460, 1497
SatI	GCNGC	5 cut(s)	270, 444, 1077, 1342, 1553
Sau3AI	GATC	7 cut(s)	276, 571, 700, 1033, 1042, 1292, 1572
Sau96I	GGNCC	6 cut(s)	296, 316, 410, 651, 776, 848
ScaI	AGTACT	2 cut(s)	1331, 1387
ScrFI	CCNGG	3 cut(s)	414, 751, 927
SduI	GDGCHC	3 cut(s)	167, 217, 646
SfaNI	GCATC	3 cut(s)	466, 604, 1250
SfcI	CTRYAG	2 cut(s)	564, 1389
Sfr274I	CTCGAG	1 cut(s)	1347
SinI	GGWCC	4 cut(s)	296, 316, 776, 848
SlaI	CTCGAG	1 cut(s)	1347
SmiMI	CAYNNNNRTG	2 cut(s)	751, 935
SmlI	CTYRAG	4 cut(s)	1013, 1084, 1347, 1496
SmoI	CTYRAG	4 cut(s)	1013, 1084, 1347, 1496
SsiI	CCGC	5 cut(s)	426, 962, 1051, 1116, 1342
SspMI	CTAG	1 cut(s)	1433
StyD4I	CCNGG	3 cut(s)	412, 749, 925
StyI	CCWWGG	2 cut(s)	637, 647
TaaI	ACNGT	2 cut(s)	546, 1178
TaiI	ACGT	1 cut(s)	105
TaqI	TCGA	4 cut(s)	279, 871, 1207, 1348
TatI	WGTACW	2 cut(s)	1329, 1385
TauI	GCSGC	1 cut(s)	1344
TfiI	GAWTC	4 cut(s)	286, 539, 1270, 1319
Tru1I	TTAA	4 cut(s)	903, 1085, 1460, 1497
Tru9I	TTAA	4 cut(s)	903, 1085, 1460, 1497
TscAI	CASTG	2 cut(s)	316, 549
TseFI	GTSAC	3 cut(s)	103, 449, 526
TseI	GCWGC	4 cut(s)	269, 443, 1076, 1552
Tsp45I	GTSAC	3 cut(s)	103, 449, 526
TspDTI	ATGAA	5 cut(s)	37, 50, 547, 621, 1215
TspRI	CASTG	2 cut(s)	316, 549
Van91I	CCANNNNNTGG	2 cut(s)	325, 862
Vha464I	CTTAAG	2 cut(s)	1084, 1496
VpaK11BI	GGWCC	4 cut(s)	296, 316, 776, 848
XapI	RAATTY	4 cut(s)	899, 972, 1442, 1514
XceI	RCATGY	2 cut(s)	802, 1409
XcmI	CCANNNNNNNNNTGG	1 cut(s)	863
XhoI	CTCGAG	1 cut(s)	1347
XmiI	GTMKAC	1 cut(s)	1190
XmnI	GAANNNNTTC	1 cut(s)	786
XspI	CTAG	1 cut(s)	1433
ZrmI	AGTACT	2 cut(s)	1331, 1387
Zsp2I	ATGCAT	1 cut(s)	1243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.