Rorug07G0306300

Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
30702503 .. 30702898
396 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0306300.1

Sequence Viewer

Length: 396 bp
ATGCTTAATAATCTAAGACGTTTTTTCCAGCGAGTTTGGGCCCTTGATAAGGGTTCCAAGATTCAACAGAGAGCGCCAAACAGATTTGTCCATCTACGCTGGGATCAAAATAAGGTTTTGAAGGGTGGACCATGGAGATTTAATCAAGCTCCAGTGATTCTTCAAGAATATGATGGTGTCACACCTATTCATGAGATTAATCTGACCTCACTATTCTTCTGGGTTCGAATTAGCAACATACCACCCTTGTTCGAAGAGCCTGACATGATTAGAAACATAGCTACAGGTCTTGCTCCAAATACTTGCATGGAGCTTGAGAAAGGAAATTTGGTTGAACCAAATAGCAACATCAATGGCAAAGAAGATTCTGAGGAGCAAATTGGCAAGACTGAATAA

Protein Analysis

131

Amino Acids

15.22

Weight (kDa)

6.75

Isoelectric Point (pI)

58.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 111
AcsI RAATTY 1 cut(s) 325
AfiI CCNNNNNNNGG 1 cut(s) 49
AgsI TTSAA 4 cut(s) 65, 121, 164, 335
AjuI GAANNNNNNNTTGG 2 cut(s) 311, 343
AluBI AGCT 3 cut(s) 149, 281, 313
AluI AGCT 3 cut(s) 149, 281, 313
AlwI GGATC 1 cut(s) 111
AoxI GGCC 1 cut(s) 39
ApaI GGGCCC 1 cut(s) 43
ApoI RAATTY 1 cut(s) 325
AseI ATTAAT 1 cut(s) 198
AspLEI GCGC 1 cut(s) 76
AspS9I GGNCC 3 cut(s) 39, 40, 128
AsuII TTCGAA 2 cut(s) 226, 252
AvaII GGWCC 1 cut(s) 128
BaeGI GKGCMC 1 cut(s) 43
BanII GRGCYC 1 cut(s) 43
BccI CCATC 2 cut(s) 99, 167
BfmI CTRYAG 1 cut(s) 282
BfoI RGCGCY 1 cut(s) 77
Bme18I GGWCC 1 cut(s) 128
BmgT120I GGNCC 3 cut(s) 39, 40, 128
BmiI GGNNCC 2 cut(s) 41, 55
BpmI CTGGAG 1 cut(s) 135
Bpu14I TTCGAA 2 cut(s) 226, 252
BpuEI CTTGAG 1 cut(s) 335
BsaJI CCNNGG 1 cut(s) 131
Bsc4I CCNNNNNNNGG 1 cut(s) 49
Bse1I ACTGG 1 cut(s) 152
BseDI CCNNGG 1 cut(s) 131
BseLI CCNNNNNNNGG 1 cut(s) 49
BseMII CTCAG 1 cut(s) 360
BseNI ACTGG 1 cut(s) 152
BseRI GAGGAG 1 cut(s) 386
BseSI GKGCMC 1 cut(s) 43
BseYI CCCAGC 1 cut(s) 99
BshFI GGCC 1 cut(s) 41
BslI CCNNNNNNNGG 1 cut(s) 49
BsnI GGCC 1 cut(s) 41
Bsp119I TTCGAA 2 cut(s) 226, 252
Bsp120I GGGCCC 1 cut(s) 39
Bsp1286I GDGCHC 1 cut(s) 43
Bsp143I GATC 1 cut(s) 103
Bsp19I CCATGG 1 cut(s) 131
BspANI GGCC 1 cut(s) 41
BspCNI CTCAG 1 cut(s) 361
BspHI TCATGA 1 cut(s) 190
BspLI GGNNCC 2 cut(s) 41, 55
BspPI GGATC 1 cut(s) 111
BspQI GCTCTTC 1 cut(s) 249
BspT104I TTCGAA 2 cut(s) 226, 252
BsrI ACTGG 1 cut(s) 152
BssECI CCNNGG 1 cut(s) 131
BssMI GATC 1 cut(s) 103
BssT1I CCWWGG 1 cut(s) 131
Bst6I CTCTTC 1 cut(s) 249
BstBI TTCGAA 2 cut(s) 226, 252
BstDEI CTNAG 2 cut(s) 14, 369
BstDSI CCRYGG 1 cut(s) 131
BstENI CCTNNNNNAGG 1 cut(s) 47
BstH2I RGCGCY 1 cut(s) 77
BstHHI GCGC 1 cut(s) 76
BstKTI GATC 1 cut(s) 106
BstMBI GATC 1 cut(s) 103
BstSFI CTRYAG 1 cut(s) 282
BstSLI GKGCMC 1 cut(s) 43
BsuRI GGCC 1 cut(s) 41
BtgI CCRYGG 1 cut(s) 131
BtsIMutI CAGTG 1 cut(s) 159
CciI TCATGA 1 cut(s) 190
CfoI GCGC 1 cut(s) 76
Cfr13I GGNCC 3 cut(s) 39, 40, 128
CviAII CATG 4 cut(s) 132, 191, 265, 307
CviJI RGCY 5 cut(s) 41, 149, 259, 281, 313
CviKI_1 RGCY 5 cut(s) 41, 149, 259, 281, 313
DdeI CTNAG 2 cut(s) 14, 369
DpnI GATC 1 cut(s) 105
DpnII GATC 1 cut(s) 103
Eam1104I CTCTTC 1 cut(s) 249
EarI CTCTTC 1 cut(s) 249
Eco130I CCWWGG 1 cut(s) 131
Eco24I GRGCYC 1 cut(s) 43
Eco47I GGWCC 1 cut(s) 128
EcoNI CCTNNNNNAGG 1 cut(s) 47
EcoO109I RGGNCCY 1 cut(s) 40
EcoT14I CCWWGG 1 cut(s) 131
EcoT38I GRGCYC 1 cut(s) 43
ErhI CCWWGG 1 cut(s) 131
FaeI CATG 4 cut(s) 135, 194, 268, 310
FaiI YATR 7 cut(s) 133, 171, 192, 239, 266, 278, 308
FatI CATG 4 cut(s) 131, 190, 264, 306
FriOI GRGCYC 1 cut(s) 43
GlaI GCGC 1 cut(s) 75
GsaI CCCAGC 1 cut(s) 103
GsuI CTGGAG 1 cut(s) 135
HaeII RGCGCY 1 cut(s) 77
HaeIII GGCC 1 cut(s) 41
HhaI GCGC 1 cut(s) 76
Hin1II CATG 4 cut(s) 135, 194, 268, 310
Hin6I GCGC 1 cut(s) 74
HinP1I GCGC 1 cut(s) 74
HinfI GANTC 3 cut(s) 61, 157, 365
Hpy166II GTNNAC 1 cut(s) 128
Hpy188I TCNGA 2 cut(s) 204, 370
Hpy188III TCNNGA 2 cut(s) 164, 191
Hpy8I GTNNAC 1 cut(s) 128
HpyAV CCTTC 1 cut(s) 115
HpyCH4IV ACGT 1 cut(s) 19
HpyCH4V TGCA 1 cut(s) 306
HpyF3I CTNAG 2 cut(s) 14, 369
HpySE526I ACGT 1 cut(s) 19
Hsp92II CATG 4 cut(s) 135, 194, 268, 310
HspAI GCGC 1 cut(s) 74
Kzo9I GATC 1 cut(s) 103
LguI GCTCTTC 1 cut(s) 249
LmnI GCTCC 4 cut(s) 154, 298, 310, 373
LpnPI CCDG 6 cut(s) 41, 85, 165, 205, 270, 273
MaeII ACGT 1 cut(s) 19
MaeIII GTNAC 1 cut(s) 178
MalI GATC 1 cut(s) 105
MboI GATC 1 cut(s) 103
MboII GAAGA 4 cut(s) 152, 208, 266, 374
MhlI GDGCHC 1 cut(s) 43
MluCI AATT 3 cut(s) 228, 325, 378
MnlI CCTC 2 cut(s) 217, 364
MseI TTAA 3 cut(s) 6, 141, 198
NcoI CCATGG 1 cut(s) 131
NdeII GATC 1 cut(s) 103
NlaIII CATG 4 cut(s) 135, 194, 268, 310
NlaIV GGNNCC 2 cut(s) 41, 55
NmuCI GTSAC 1 cut(s) 178
NspV TTCGAA 2 cut(s) 226, 252
PagI TCATGA 1 cut(s) 190
PciSI GCTCTTC 1 cut(s) 249
PfeI GAWTC 3 cut(s) 61, 157, 365
PshBI ATTAAT 1 cut(s) 198
PspFI CCCAGC 1 cut(s) 99
PspN4I GGNNCC 2 cut(s) 41, 55
PspOMI GGGCCC 1 cut(s) 39
PspPI GGNCC 3 cut(s) 39, 40, 128
SapI GCTCTTC 1 cut(s) 249
SaqAI TTAA 3 cut(s) 6, 141, 198
Sau3AI GATC 1 cut(s) 103
Sau96I GGNCC 3 cut(s) 39, 40, 128
SduI GDGCHC 1 cut(s) 43
SetI ASST 8 cut(s) 22, 117, 151, 187, 209, 283, 289, 315
SfcI CTRYAG 1 cut(s) 282
SfuI TTCGAA 2 cut(s) 226, 252
SinI GGWCC 1 cut(s) 128
SmlI CTYRAG 1 cut(s) 314
SmoI CTYRAG 1 cut(s) 314
Sse9I AATT 3 cut(s) 228, 325, 378
StyI CCWWGG 1 cut(s) 131
TaiI ACGT 1 cut(s) 22
TaqI TCGA 2 cut(s) 226, 252
TasI AATT 3 cut(s) 228, 325, 378
TfiI GAWTC 3 cut(s) 61, 157, 365
Tru1I TTAA 3 cut(s) 6, 141, 198
Tru9I TTAA 3 cut(s) 6, 141, 198
TscAI CASTG 1 cut(s) 159
TseFI GTSAC 1 cut(s) 178
Tsp45I GTSAC 1 cut(s) 178
TspDTI ATGAA 1 cut(s) 179
TspRI CASTG 1 cut(s) 159
VpaK11BI GGWCC 1 cut(s) 128
VspI ATTAAT 1 cut(s) 198
XagI CCTNNNNNAGG 1 cut(s) 47
XapI RAATTY 1 cut(s) 325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.