Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0003643

Physical Location & Seq

Genomic Coordinates Forward (+)

16491279 .. 16496664

Gene Structure 5386 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g16530.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGCACTACTCGTCTGATAAATGCTTGACACATAGTTTATCTAGTTTCTTCACTGTGTCACATTCAGTTGACACTAATGTGAACTTTGCCTGCTACCCGATCTTTGCCATTCGTCACAACCTCACACACAACTCGAAGAATAAGAAGAAGAAGAAGAAGAGGCGAATCAGTGATGCAAAGAAAGCAAGCTCTGCTCGCAGTCGCAGACCAATGTGGTCATTGGCACGAAAAACCAGAAAAATGACACGTCTCCTCATCCTGACCCAATCACTCTCGTCCCATCCCATTCCCAAACCCACCATTTCCAACGCTTACACCTATTTCCACATCCCTCCCTCCAGTCTTTCTACCTCTGCATTTCTTCAACCAGTTCGGAGCCCTGCAATTCGTGCGTTTTGTTCGAACCCCAGCGGTGCAGCGGGAGTTGGGTCAGTACACACAGCACCCAGCATGCAGTATCCGGAGGATATATCGTACCTGACGCAGCGTGAAGCTGCTGAGATCGATGAGGTTCTCATGGGTCCTCTCGGCTTCAGCGTCGACCAGTTAATGGAATTGGCTGGTTTGAGCGTCGCCACTTCCATTGCAGAGGTCTATAAACCGAGTGAGTATAACCGTGTCCTCGCAATTTGTGGCCCTGGAAACAACGGTGGTGATGGTCTTGTGGCTGCTCGTCACCTGCATCACTTTGGATATAAGCCGTCTGTTTGTTATCCAAGGCGTACTGCCAAGCCTCTTTATGCTGGTCTTGTTACGCAACTGGAATCACTCTCAGTCCCTTTCATCTCAGTGGAAGATCTGCCGTTGGACTTGTCAACGGACTTTGACATTATTGTAGACGCAATGTTTGGTTTCTCATTCCATGGTTCCCCAAGGCCTCCTTTTGATAACCTGATCCAAAAGCTTGTTTGTGTAAATAAATATGACCAAACTTGCGAAAAGTCGTCTGTCATTGTTTCCATAGATATTCCATCTGGGTGGCATGTCGAAGGGGATGGTGGTGTTGAAGGCATTAAGCCTGACATGTTGGTTTCTCTGACTGCTCCAAAGTTGTGTGCGAAGAAATTTTTTGGTCCACACCATTTTCTGGGTGGTAGATTTGTCCCACCATCTATTGCCGATAAATATAAGCTTCGCCTTCCACCATATCCAGGCACTTCTATGTGTGTCCGTATTGGAAGGTCTCCACAAGTTGATATATCAGCTCTAAGAGAGAACTATATTTCGCCTGAGTTTCTTGAGGAACAGGTGGACGCTGACCCCTTTGATCAGTTCCGCAAATGGTTCGACGATGTAGTGGCTGCTGGTTTGAGGGAACCAAATGCTATGGCATTGTCAACGGCTGCCAAGAACGGAAAAATCTCGTCACGAATGGTATTGCTCAAAGGATTTGATAAGAACGGTTTTGTCTGGTACACAAACTATGAAAGTCGAAAGGCACATGAATTGTCTGAAAATCCTCATGCATCTCTTCTTTTCTACTGGGATAGTCTTAATCGGCAGGTAAGAGTAGAAGGGTCTGTGCAGAAAGTTTCTGATGAGGAATCTGATCGATCCTTCCATAGCCGTCCTCGAGGCAGTCAGATTGGAGCAATAGTTAGCAAGCAGAGCACTGTTGTTCCCGGAAGGCATGTTCTGTATGACCAATACAAAGAACTAGAAGAAAAGTTCTCTGATGGAAGTTTAATTCCAAAACCTAAAAACTGGGGAGGATACAGACTTAAGCCAGAGATGTTTGAATTTTGGCAAGGCCAAAAATCTCGTTTGCATGACAGGTTACGATATTCTCCTGAAGAGATCAATGGACAACAAGTGTGGAAAATTGAGCGGTTGGCGCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004733 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006081 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006734 GO:0006739 GO:0006753 GO:0006766 GO:0006767 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009987 GO:0016491 GO:0016638 GO:0016641 GO:0016853 GO:0016854 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0031974 GO:0031981 GO:0034356 GO:0034641 GO:0034654 GO:0042364 GO:0042816 GO:0042819 GO:0042822 GO:0042823 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046184 GO:0046483 GO:0046496 GO:0051186 GO:0051188 GO:0052856 GO:0052857 GO:0055086 GO:0055114 GO:0070013 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00750 ko01100 ko01120 map00750 map01100 map01120

Pfam Domains

Protein Families

PNP_phzG_C Putative_PNPOx YjeF_N

Protein Analysis

614

Amino Acids

68.69

Weight (kDa)

9.2

Isoelectric Point (pI)

43.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49970 AT5G49970
fragaria_vesca	FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940
malus_domestica	MD08G1191800.v1.1 MD15G1380600.v1.1
prunus_persica	Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1
pyrus_communis	pycom08g16530 pycom15g34090
rosa_chinensis	RchiOBHm_Chr7g0237681
rosa_laevigata	RLG00000000977
rosa_multiflora	Rmu_co8471315.1_g000001 Rmu_sc0007826.1_g000003
rosa_roxburghii	Rroxscaffold_3G00223890
rosa_rugosa	Rorug07G0306200 Rorug07G0306300 Rorug07G0306400 Rorug07G0306500
rosa_samantha	Rh7AG462900 Rh7BG433000 Rh7CG479900 Rh7DG448900
rosa_wichuraiana	Rw7G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	687
AbsI	CCTCGAGG	1 cut(s)	1572
Acc36I	ACCTGC	2 cut(s)	687, 1492
AccB1I	GGYRCC	1 cut(s)	1834
AccB7I	CCANNNNNTGG	2 cut(s)	550, 1087
AccBSI	CCGCTC	1 cut(s)	1828
AccI	GTMKAC	2 cut(s)	540, 837
AccIII	TCCGGA	1 cut(s)	460
AciI	CCGC	4 cut(s)	411, 419, 1276, 1828
AclWI	GGATC	2 cut(s)	889, 1548
AcsI	RAATTY	2 cut(s)	1064, 1739
AcuI	CTGAAG	2 cut(s)	517, 1812
AcyI	GRCGYC	1 cut(s)	1835
AfaI	GTAC	4 cut(s)	435, 476, 724, 1415
AfiI	CCNNNNNNNGG	3 cut(s)	550, 1087, 1151
AflII	CTTAAG	1 cut(s)	1721
AflIII	ACRYGT	2 cut(s)	245, 1023
AgsI	TTSAA	3 cut(s)	365, 1007, 1739
AjiI	CACGTC	1 cut(s)	248
AjnI	CCWGG	2 cut(s)	637, 1150
AleI	CACNNNNGTG	1 cut(s)	77
AloI	GAACNNNNNNTCC	2 cut(s)	1617, 1649
AluBI	AGCT	5 cut(s)	189, 494, 904, 1132, 1205
AluI	AGCT	5 cut(s)	189, 494, 904, 1132, 1205
Alw21I	GWGCWC	1 cut(s)	1613
Alw26I	GTCTC	2 cut(s)	254, 1188
AlwI	GGATC	2 cut(s)	889, 1548
Ama87I	CYCGRG	1 cut(s)	1572
Aor13HI	TCCGGA	1 cut(s)	460
AoxI	GGCC	3 cut(s)	634, 875, 1750
ApeKI	GCWGC	6 cut(s)	416, 484, 494, 668, 1301, 1343
ApoI	RAATTY	2 cut(s)	1064, 1739
ArsI	GACNNNNNNTTYG	2 cut(s)	830, 862
AspLEI	GCGC	1 cut(s)	1837
AspS9I	GGNCC	3 cut(s)	521, 635, 1073
AsuC2I	CCSGG	1 cut(s)	1623
AsuHPI	GGTGA	2 cut(s)	665, 668
AsuII	TTCGAA	1 cut(s)	401
AvaI	CYCGRG	1 cut(s)	1572
AvaII	GGWCC	2 cut(s)	521, 1073
BanI	GGYRCC	1 cut(s)	1834
BanII	GRGCYC	1 cut(s)	380
Bbv12I	GWGCWC	1 cut(s)	1613
BbvI	GCAGC	6 cut(s)	428, 481, 496, 655, 1288, 1330
BccI	CCATC	6 cut(s)	288, 650, 979, 989, 1117, 1670
BceAI	ACGGC	4 cut(s)	685, 787, 1356, 1551
BcgI	CGANNNNNNTGC	2 cut(s)	1267, 1301
BciT130I	CCWGG	2 cut(s)	639, 1152
BciVI	GTATCC	2 cut(s)	468, 1706
BclI	TGATCA	1 cut(s)	1267
BcnI	CCSGG	1 cut(s)	1623
BcoDI	GTCTC	2 cut(s)	254, 1188
BfaI	CTAG	2 cut(s)	42, 1658
BfoI	RGCGCY	1 cut(s)	1838
BfrI	CTTAAG	1 cut(s)	1721
BfuAI	ACCTGC	2 cut(s)	687, 1492
BfuI	GTATCC	2 cut(s)	468, 1706
BglII	AGATCT	1 cut(s)	796
BisI	GCNGC	6 cut(s)	417, 485, 495, 669, 1302, 1344
BlsI	GCNGC	6 cut(s)	418, 486, 496, 670, 1303, 1345
Bme1390I	CCNGG	3 cut(s)	639, 1152, 1623
Bme18I	GGWCC	2 cut(s)	521, 1073
BmeT110I	CYCGRG	1 cut(s)	1572
BmgBI	CACGTC	1 cut(s)	248
BmgT120I	GGNCC	3 cut(s)	521, 635, 1073
BmiI	GGNNCC	5 cut(s)	377, 522, 868, 1317, 1836
BmrFI	CCNGG	3 cut(s)	639, 1152, 1623
BmrI	ACTGGG	2 cut(s)	1492, 1714
BmsI	GCATC	3 cut(s)	163, 691, 1475
BmuI	ACTGGG	2 cut(s)	1492, 1714
BpmI	CTGGAG	1 cut(s)	322
Bpu14I	TTCGAA	1 cut(s)	401
BpuEI	CTTGAG	1 cut(s)	1259
BpuMI	CCSGG	1 cut(s)	1623
Bsa29I	ATCGAT	2 cut(s)	504, 1552
BsaHI	GRCGYC	1 cut(s)	1835
BsaI	GGTCTC	1 cut(s)	1188
BsaJI	CCNNGG	4 cut(s)	637, 716, 862, 872
BsaWI	WCCGGW	1 cut(s)	460
BsaXI	ACNNNNNCTCC	2 cut(s)	1581, 1611
Bsc4I	CCNNNNNNNGG	3 cut(s)	550, 1087, 1151
Bse1I	ACTGG	6 cut(s)	339, 368, 544, 765, 1487, 1709
Bse3DI	GCAATG	2 cut(s)	582, 849
BseAI	TCCGGA	1 cut(s)	460
BseBI	CCWGG	2 cut(s)	639, 1152
BseCI	ATCGAT	2 cut(s)	504, 1552
BseDI	CCNNGG	4 cut(s)	637, 716, 862, 872
BseGI	GGATG	4 cut(s)	255, 280, 327, 1000
BseLI	CCNNNNNNNGG	3 cut(s)	550, 1087, 1151
BseMI	GCAATG	2 cut(s)	582, 849
BseMII	CTCAG	4 cut(s)	489, 786, 801, 1221
BseNI	ACTGG	6 cut(s)	339, 368, 544, 765, 1487, 1709
BseRI	GAGGAG	1 cut(s)	242
BseXI	GCAGC	6 cut(s)	428, 481, 496, 655, 1288, 1330
BseYI	CCCAGC	2 cut(s)	407, 446
BsgI	GTGCAG	2 cut(s)	435, 1544
BshFI	GGCC	3 cut(s)	636, 877, 1752
BshNI	GGYRCC	1 cut(s)	1834
BshVI	ATCGAT	2 cut(s)	504, 1552
BsiHKAI	GWGCWC	1 cut(s)	1613
BsiHKCI	CYCGRG	1 cut(s)	1572
BsiSI	CCGG	2 cut(s)	461, 1623
BslFI	GGGAC	3 cut(s)	262, 761, 1088
BslI	CCNNNNNNNGG	3 cut(s)	550, 1087, 1151
BsmAI	GTCTC	2 cut(s)	254, 1188
BsmBI	CGTCTC	1 cut(s)	254
BsmFI	GGGAC	3 cut(s)	262, 761, 1088
BsnI	GGCC	3 cut(s)	636, 877, 1752
Bso31I	GGTCTC	1 cut(s)	1188
BsoBI	CYCGRG	1 cut(s)	1572
Bsp119I	TTCGAA	1 cut(s)	401
Bsp1286I	GDGCHC	2 cut(s)	380, 1613
Bsp13I	TCCGGA	1 cut(s)	460
Bsp143I	GATC	8 cut(s)	99, 501, 796, 894, 1267, 1549, 1553, 1797
Bsp19I	CCATGG	1 cut(s)	862
BspACI	CCGC	4 cut(s)	411, 419, 1276, 1828
BspANI	GGCC	3 cut(s)	636, 877, 1752
BspCNI	CTCAG	4 cut(s)	490, 785, 800, 1222
BspDI	ATCGAT	2 cut(s)	504, 1552
BspEI	TCCGGA	1 cut(s)	460
BspLI	GGNNCC	5 cut(s)	377, 522, 868, 1317, 1836
BspMI	ACCTGC	2 cut(s)	687, 1492
BspPI	GGATC	2 cut(s)	889, 1548
BspT104I	TTCGAA	1 cut(s)	401
BspT107I	GGYRCC	1 cut(s)	1834
BspTI	CTTAAG	1 cut(s)	1721
BspTNI	GGTCTC	1 cut(s)	1188
BsrBI	CCGCTC	1 cut(s)	1828
BsrDI	GCAATG	2 cut(s)	582, 849
BsrI	ACTGG	6 cut(s)	339, 368, 544, 765, 1487, 1709
BssECI	CCNNGG	4 cut(s)	637, 716, 862, 872
BssMI	GATC	8 cut(s)	99, 501, 796, 894, 1267, 1549, 1553, 1797
BssNI	GRCGYC	1 cut(s)	1835
BssT1I	CCWWGG	3 cut(s)	716, 862, 872
Bst2UI	CCWGG	2 cut(s)	639, 1152
Bst4CI	ACNGT	5 cut(s)	55, 617, 650, 1403, 1615
Bst6I	CTCTTC	3 cut(s)	152, 1476, 1788
BstACI	GRCGYC	1 cut(s)	1835
BstAFI	CTTAAG	1 cut(s)	1721
BstAPI	GCANNNNNTGC	2 cut(s)	191, 389
BstBI	TTCGAA	1 cut(s)	401
BstC8I	GCNNGC	5 cut(s)	91, 187, 196, 452, 1604
BstDEI	CTNAG	5 cut(s)	498, 772, 787, 1208, 1230
BstDSI	CCRYGG	1 cut(s)	862
BstF5I	GGATG	4 cut(s)	255, 280, 327, 1000
BstH2I	RGCGCY	1 cut(s)	1838
BstHHI	GCGC	1 cut(s)	1837
BstKTI	GATC	8 cut(s)	102, 504, 799, 897, 1270, 1552, 1556, 1800
BstMAI	GTCTC	2 cut(s)	254, 1188
BstMBI	GATC	8 cut(s)	99, 501, 796, 894, 1267, 1549, 1553, 1797
BstMWI	GCNNNNNNNGC	6 cut(s)	182, 191, 195, 389, 1608, 1834
BstNI	CCWGG	2 cut(s)	639, 1152
BstNSI	RCATGY	4 cut(s)	454, 986, 1027, 1634
BstSCI	CCNGG	3 cut(s)	637, 1150, 1621
BstV1I	GCAGC	6 cut(s)	428, 481, 496, 655, 1288, 1330
BstX2I	RGATCY	1 cut(s)	796
BstXI	CCANNNNNNTGG	1 cut(s)	978
BstYI	RGATCY	1 cut(s)	796
Bsu15I	ATCGAT	2 cut(s)	504, 1552
BsuI	GTATCC	2 cut(s)	468, 1706
BsuRI	GGCC	3 cut(s)	636, 877, 1752
BsuTUI	ATCGAT	2 cut(s)	504, 1552
BtgI	CCRYGG	1 cut(s)	862
BtrI	CACGTC	1 cut(s)	248
BtsCI	GGATG	4 cut(s)	255, 280, 327, 1000
BtsIMutI	CAGTG	4 cut(s)	51, 175, 795, 1611
BveI	ACCTGC	2 cut(s)	687, 1492
Cac8I	GCNNGC	5 cut(s)	91, 187, 196, 452, 1604
CfoI	GCGC	1 cut(s)	1837
Cfr13I	GGNCC	3 cut(s)	521, 635, 1073
ClaI	ATCGAT	2 cut(s)	504, 1552
CseI	GACGC	5 cut(s)	490, 526, 559, 848, 1262
Csp6I	GTAC	4 cut(s)	434, 475, 723, 1414
CspCI	CAANNNNNGTGG	4 cut(s)	565, 600, 1796, 1831
CviAII	CATG	9 cut(s)	451, 517, 863, 983, 1024, 1442, 1463, 1631, 1769
CviQI	GTAC	4 cut(s)	434, 475, 723, 1414
DdeI	CTNAG	5 cut(s)	498, 772, 787, 1208, 1230
DinI	GGCGCC	1 cut(s)	1836
DpnI	GATC	8 cut(s)	101, 503, 798, 896, 1269, 1551, 1555, 1799
DpnII	GATC	8 cut(s)	99, 501, 796, 894, 1267, 1549, 1553, 1797
Eam1104I	CTCTTC	3 cut(s)	152, 1476, 1788
EarI	CTCTTC	3 cut(s)	152, 1476, 1788
Eco130I	CCWWGG	3 cut(s)	716, 862, 872
Eco147I	AGGCCT	1 cut(s)	877
Eco24I	GRGCYC	1 cut(s)	380
Eco31I	GGTCTC	1 cut(s)	1188
Eco47I	GGWCC	2 cut(s)	521, 1073
Eco57I	CTGAAG	2 cut(s)	517, 1812
Eco88I	CYCGRG	1 cut(s)	1572
EcoO109I	RGGNCCY	1 cut(s)	521
EcoRII	CCWGG	2 cut(s)	637, 1150
EcoT14I	CCWWGG	3 cut(s)	716, 862, 872
EcoT22I	ATGCAT	1 cut(s)	1468
EcoT38I	GRGCYC	1 cut(s)	380
EgeI	GGCGCC	1 cut(s)	1836
EheI	GGCGCC	1 cut(s)	1836
ErhI	CCWWGG	3 cut(s)	716, 862, 872
Esp3I	CGTCTC	1 cut(s)	254
FaeI	CATG	9 cut(s)	454, 520, 866, 986, 1027, 1445, 1466, 1634, 1772
FalI	AAGNNNNNCTT	2 cut(s)	865, 897
FaqI	GGGAC	3 cut(s)	262, 761, 1088
FatI	CATG	9 cut(s)	450, 516, 862, 982, 1023, 1441, 1462, 1630, 1768
FauI	CCCGC	1 cut(s)	412
FbaI	TGATCA	1 cut(s)	1267
FblI	GTMKAC	2 cut(s)	540, 837
Fnu4HI	GCNGC	6 cut(s)	417, 485, 495, 669, 1302, 1344
FokI	GGATG	4 cut(s)	242, 267, 314, 1007
FriOI	GRGCYC	1 cut(s)	380
Fsp4HI	GCNGC	6 cut(s)	417, 485, 495, 669, 1302, 1344
FspBI	CTAG	2 cut(s)	42, 1658
GlaI	GCGC	1 cut(s)	1836
GluI	GCNGC	6 cut(s)	417, 485, 495, 669, 1302, 1344
GsaI	CCCAGC	2 cut(s)	411, 450
GsuI	CTGGAG	1 cut(s)	322
HaeII	RGCGCY	1 cut(s)	1838
HaeIII	GGCC	3 cut(s)	636, 877, 1752
HapII	CCGG	2 cut(s)	461, 1623
HgaI	GACGC	5 cut(s)	490, 526, 559, 848, 1262
HhaI	GCGC	1 cut(s)	1837
Hin1I	GRCGYC	1 cut(s)	1835
Hin1II	CATG	9 cut(s)	454, 520, 866, 986, 1027, 1445, 1466, 1634, 1772
Hin6I	GCGC	1 cut(s)	1835
HinP1I	GCGC	1 cut(s)	1835
HincII	GTYRAC	4 cut(s)	70, 541, 816, 1338
HindII	GTYRAC	4 cut(s)	70, 541, 816, 1338
HindIII	AAGCTT	2 cut(s)	902, 1130
HinfI	GANTC	3 cut(s)	165, 764, 1544
HpaII	CCGG	2 cut(s)	461, 1623
HphI	GGTGA	2 cut(s)	665, 668
Hpy188I	TCNGA	8 cut(s)	16, 375, 1038, 1453, 1537, 1549, 1584, 1675
Hpy188III	TCNNGA	5 cut(s)	259, 461, 1238, 1368, 1790
Hpy99I	CGWCG	3 cut(s)	542, 575, 1292
HpyAV	CCTTC	7 cut(s)	983, 1001, 1148, 1173, 1508, 1567, 1620
HpyCH4III	ACNGT	5 cut(s)	55, 617, 650, 1403, 1615
HpyCH4IV	ACGT	1 cut(s)	247
HpyF10VI	GCNNNNNNNGC	6 cut(s)	182, 191, 195, 389, 1608, 1834
HpyF3I	CTNAG	5 cut(s)	498, 772, 787, 1208, 1230
HpySE526I	ACGT	1 cut(s)	247
Hsp92I	GRCGYC	1 cut(s)	1835
Hsp92II	CATG	9 cut(s)	454, 520, 866, 986, 1027, 1445, 1466, 1634, 1772
HspAI	GCGC	1 cut(s)	1835
KasI	GGCGCC	1 cut(s)	1834
Kpn2I	TCCGGA	1 cut(s)	460
Ksp22I	TGATCA	1 cut(s)	1267
Kzo9I	GATC	8 cut(s)	99, 501, 796, 894, 1267, 1549, 1553, 1797
LmnI	GCTCC	3 cut(s)	375, 1048, 1589
Lsp1109I	GCAGC	6 cut(s)	428, 481, 496, 655, 1288, 1330
LweI	GCATC	3 cut(s)	163, 691, 1475
MaeI	CTAG	2 cut(s)	42, 1658
MaeII	ACGT	1 cut(s)	247
MaeIII	GTNAC	6 cut(s)	57, 113, 674, 751, 1365, 1776
MalI	GATC	8 cut(s)	101, 503, 798, 896, 1269, 1551, 1555, 1799
MbiI	CCGCTC	1 cut(s)	1828
MboI	GATC	8 cut(s)	99, 501, 796, 894, 1267, 1549, 1553, 1797
MflI	RGATCY	1 cut(s)	796
MhlI	GDGCHC	2 cut(s)	380, 1613
MluCI	AATT	8 cut(s)	384, 554, 627, 1064, 1445, 1686, 1739, 1821
Mly113I	GGCGCC	1 cut(s)	1835
MmeI	TCCRAC	2 cut(s)	330, 786
Mph1103I	ATGCAT	1 cut(s)	1468
MroI	TCCGGA	1 cut(s)	460
MseI	TTAA	5 cut(s)	548, 1014, 1494, 1685, 1722
MslI	CAYNNNNRTG	4 cut(s)	77, 788, 976, 1160
MspA1I	CMGCKG	2 cut(s)	411, 419
MspCI	CTTAAG	1 cut(s)	1721
MspI	CCGG	2 cut(s)	461, 1623
MspR9I	CCNGG	3 cut(s)	639, 1152, 1623
MvaI	CCWGG	2 cut(s)	639, 1152
MwoI	GCNNNNNNNGC	6 cut(s)	182, 191, 195, 389, 1608, 1834
NarI	GGCGCC	1 cut(s)	1835
NciI	CCSGG	1 cut(s)	1623
NcoI	CCATGG	1 cut(s)	862
NdeII	GATC	8 cut(s)	99, 501, 796, 894, 1267, 1549, 1553, 1797
NlaIII	CATG	9 cut(s)	454, 520, 866, 986, 1027, 1445, 1466, 1634, 1772
NlaIV	GGNNCC	5 cut(s)	377, 522, 868, 1317, 1836
NmeAIII	GCCGAG	1 cut(s)	507
NmuCI	GTSAC	4 cut(s)	57, 113, 674, 1365
NsiI	ATGCAT	1 cut(s)	1468
NspI	RCATGY	4 cut(s)	454, 986, 1027, 1634
NspV	TTCGAA	1 cut(s)	401
OliI	CACNNNNGTG	1 cut(s)	77
PaeI	GCATGC	1 cut(s)	454
PaeR7I	CTCGAG	1 cut(s)	1572
PaqCI	CACCTGC	1 cut(s)	687
PceI	AGGCCT	1 cut(s)	877
PciI	ACATGT	1 cut(s)	1023
PcsI	WCGNNNNNNNCGW	1 cut(s)	534
PfeI	GAWTC	3 cut(s)	165, 764, 1544
PflMI	CCANNNNNTGG	2 cut(s)	550, 1087
PfoI	TCCNGGA	1 cut(s)	1621
PkrI	GCNGC	6 cut(s)	418, 486, 496, 670, 1303, 1345
PluTI	GGCGCC	1 cut(s)	1838
PpuMI	RGGWCCY	1 cut(s)	521
PscI	ACATGT	1 cut(s)	1023
Psp5II	RGGWCCY	1 cut(s)	521
Psp6I	CCWGG	2 cut(s)	637, 1150
PspFI	CCCAGC	2 cut(s)	407, 446
PspGI	CCWGG	2 cut(s)	637, 1150
PspN4I	GGNNCC	5 cut(s)	377, 522, 868, 1317, 1836
PspPI	GGNCC	3 cut(s)	521, 635, 1073
PspPPI	RGGWCCY	1 cut(s)	521
PspXI	VCTCGAGB	1 cut(s)	1572
PsuI	RGATCY	1 cut(s)	796
RsaI	GTAC	4 cut(s)	435, 476, 724, 1415
RsaNI	GTAC	4 cut(s)	434, 475, 723, 1414
RseI	CAYNNNNRTG	4 cut(s)	77, 788, 976, 1160
SalI	GTCGAC	1 cut(s)	539
SaqAI	TTAA	5 cut(s)	548, 1014, 1494, 1685, 1722
SatI	GCNGC	6 cut(s)	417, 485, 495, 669, 1302, 1344
Sau3AI	GATC	8 cut(s)	99, 501, 796, 894, 1267, 1549, 1553, 1797
Sau96I	GGNCC	3 cut(s)	521, 635, 1073
ScrFI	CCNGG	3 cut(s)	639, 1152, 1623
SduI	GDGCHC	2 cut(s)	380, 1613
SfaNI	GCATC	3 cut(s)	163, 691, 1475
SfoI	GGCGCC	1 cut(s)	1836
Sfr274I	CTCGAG	1 cut(s)	1572
SfuI	TTCGAA	1 cut(s)	401
SinI	GGWCC	2 cut(s)	521, 1073
SlaI	CTCGAG	1 cut(s)	1572
SmiMI	CAYNNNNRTG	4 cut(s)	77, 788, 976, 1160
SmlI	CTYRAG	3 cut(s)	1238, 1572, 1721
SmoI	CTYRAG	3 cut(s)	1238, 1572, 1721
SphI	GCATGC	1 cut(s)	454
Sse9I	AATT	8 cut(s)	384, 554, 627, 1064, 1445, 1686, 1739, 1821
SseBI	AGGCCT	1 cut(s)	877
SsiI	CCGC	4 cut(s)	411, 419, 1276, 1828
SspDI	GGCGCC	1 cut(s)	1834
SspMI	CTAG	2 cut(s)	42, 1658
StuI	AGGCCT	1 cut(s)	877
StyD4I	CCNGG	3 cut(s)	637, 1150, 1621
StyI	CCWWGG	3 cut(s)	716, 862, 872
TaaI	ACNGT	5 cut(s)	55, 617, 650, 1403, 1615
TaiI	ACGT	1 cut(s)	250
TaqI	TCGA	9 cut(s)	134, 401, 504, 540, 987, 1287, 1432, 1552, 1573
TasI	AATT	8 cut(s)	384, 554, 627, 1064, 1445, 1686, 1739, 1821
TatI	WGTACW	1 cut(s)	433
TfiI	GAWTC	3 cut(s)	165, 764, 1544
Tru1I	TTAA	5 cut(s)	548, 1014, 1494, 1685, 1722
Tru9I	TTAA	5 cut(s)	548, 1014, 1494, 1685, 1722
TscAI	CASTG	4 cut(s)	58, 175, 795, 1618
TseFI	GTSAC	4 cut(s)	57, 113, 674, 1365
TseI	GCWGC	6 cut(s)	416, 484, 494, 668, 1301, 1343
Tsp45I	GTSAC	4 cut(s)	57, 113, 674, 1365
TspDTI	ATGAA	3 cut(s)	772, 1440, 1458
TspGWI	ACGGA	3 cut(s)	833, 1160, 1368
TspRI	CASTG	4 cut(s)	58, 175, 795, 1618
Van91I	CCANNNNNTGG	2 cut(s)	550, 1087
Vha464I	CTTAAG	1 cut(s)	1721
VpaK11BI	GGWCC	2 cut(s)	521, 1073
XapI	RAATTY	2 cut(s)	1064, 1739
XceI	RCATGY	4 cut(s)	454, 986, 1027, 1634
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1088
XhoI	CTCGAG	1 cut(s)	1572
XmiI	GTMKAC	2 cut(s)	540, 837
XspI	CTAG	2 cut(s)	42, 1658
Zsp2I	ATGCAT	1 cut(s)	1468

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.