Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0003643

Physical Location & Seq

Genomic Coordinates Forward (+)

6989990 .. 6995357

Gene Structure 5368 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00223890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGTGGTCATCTTTGCGCAGAATCTCAAATATGAAATGTCTCTTCTCCTCAGCCCAATCACTATCACTATCACCCAAACTCATCTCTACCACTCACCACACTCCTTCTCCTCCTCTCTCCTCGGCTTTTCTCCAACCCACAACTCGGTGCCCTGCAATTCGTTCGCTTTGGTTCAAGCCCAGAATTGCAGAGGGAGTACGAGCACTGCACACCATGCAAAACCCAGAAGCTATTTCGTACCTGACGCAGAGCCAAGCTGCTGAGATCGATGAGATTCTCATGGGTCCTCTGGGATTCAGTGTGGACCAGTTAATGGAATTGGCTGGTTTGAGCGTGGCCACTTCAATAGCAGAGGTCTATAAACCGAGCGAGTATAATCGTGTCCTTGCGATTTGTGGTCCTGGAAACAATGGCGGTGATGGTCTTGTGGCTGCTCGTCACCTGCATCACTTTGGGTATAAGCCGTTTGTTTGTTATCCAAAGCGTACTGCTAAGCCTCTTTATACTGGTCTGGTCACTCAACTGGAATCACTGTCAGTCCCTTTCATATCTGTGGAAGATCTGCCTTTGGACTTGTCAAAGGACTTTGACATTGTTGTAGATGCAATGTTTGGGTTTTCATTCCGTGGTGATCCAAGGCCCCCTTTTGATAATCTAATCCAAAAGCTTAATTGTATCAATAATTATGATCAAACACGCCAAAAGTCCTCTGCTGTTGTCTCCATAGATATCCCATCTGGGTGGCAGGTTGAAGGAGATGGTGGTCCAGAAGGCATTAAGCCTGATATGTTGGTTTCTCTGACTGCTCCAAAGTTGTGTGCAAAGAACTTTTGTGGTCCACACCATTTTCTGGGTGGTAGATTTGTCCCACCATCTATTGCTGATAAATATAAGCTTCGTCTTCCCCCATATCCAGGCACTTCTATGTGTGTACGAATCGGAAAGCCTCCTCAAGTTGAAATATCTGCTCTAAGAGAGAACTATATTTCTCCTGAGTTTCTTGAGGAGCAGGTGGAGGCTGACCCCTTTGATCAGTTCCGCAAATGGTTTGACGATGTAGTGGCTGCTGGCATAAGGGAACCAAATGCAATGGCCTTATCAACTGCTTGCAAGAATGGAAAACCCTCATCGCGAATGGTATTGCTGAAAGGATTTGATAAGAACGGTTTTGTCTGGTATACCAATTATGAAAGTCGAAAGGCACAAGAGTTGTTTGAAAATCCTCATGCATCTCTTCTTTTCTACTGGGATGGTCTGAATCGGCAGGTGAGAATGGAAGGATCTGTGCAGAAGGTTTCTGATGAGGAATCTGACCAGTACTTCCATAGCCGTCCTCGAGGAAGTCAGATTGGAGCAATAGTTAGCAAGCAGAGCACAATAGTTCCTGGAAGGCATGTTCTCTATGCCCAATATAAAGAACTAGAAGAAAAATTCGCAGATGGAAGTTTAATTCCTAAACCAAAGAACTGGGGAGGATACAGACTTAAGCCAGAGATGTTTGAGTTTTGGCAAGGTCAAAAATCTCGCTTGCATGACAGATATCACTTGGGTTTGGGTGGGTTGGAATTGGATCCAGAACTAGTTGATGATTTGAGTCGACTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004733 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006081 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006734 GO:0006739 GO:0006753 GO:0006766 GO:0006767 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009987 GO:0016491 GO:0016638 GO:0016641 GO:0016853 GO:0016854 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0031974 GO:0031981 GO:0034356 GO:0034641 GO:0034654 GO:0042364 GO:0042816 GO:0042819 GO:0042822 GO:0042823 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046184 GO:0046483 GO:0046496 GO:0051186 GO:0051188 GO:0052856 GO:0052857 GO:0055086 GO:0055114 GO:0070013 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00750 ko01100 ko01120 map00750 map01100 map01120

Pfam Domains

Protein Families

PNP_phzG_C Putative_PNPOx YjeF_N

Protein Analysis

534

Amino Acids

59.79

Weight (kDa)

7.19

Isoelectric Point (pI)

35.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YjeF_N	PF03853	102 - 273	7e-35	YjeF-related protein N-terminus
PNPOx_N	PF01243	351 - 475	1.8e-28	Pyridoxamine 5'-phosphate oxidase
Pyridox_oxase_2	PF12766	358 - 430	3.1e-06	Pyridoxamine 5'-phosphate oxidase
PNP_phzG_C	PF10590	490 - 514	1.3e-12	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49970 AT5G49970
fragaria_vesca	FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940
malus_domestica	MD08G1191800.v1.1 MD15G1380600.v1.1
prunus_persica	Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1
pyrus_communis	pycom08g16530 pycom15g34090
rosa_chinensis	RchiOBHm_Chr7g0237681
rosa_laevigata	RLG00000000977
rosa_multiflora	Rmu_co8471315.1_g000001 Rmu_sc0007826.1_g000003
rosa_roxburghii	Rroxscaffold_3G00223890
rosa_rugosa	Rorug07G0306200 Rorug07G0306300 Rorug07G0306400 Rorug07G0306500
rosa_samantha	Rh7AG462900 Rh7BG433000 Rh7CG479900 Rh7DG448900
rosa_wichuraiana	Rw7G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	450, 1000, 1255
AbsI	CCTCGAGG	1 cut(s)	1335
Acc16I	TGCGCA	1 cut(s)	17
Acc36I	ACCTGC	4 cut(s)	450, 736, 1000, 1255
AccB1I	GGYRCC	1 cut(s)	147
AccB7I	CCANNNNNTGG	2 cut(s)	313, 850
AccI	GTMKAC	2 cut(s)	1178, 1597
AccII	CGCG	1 cut(s)	1132
AciI	CCGC	2 cut(s)	414, 1039
AclWI	GGATC	4 cut(s)	626, 1288, 1565, 1578
AcoI	YGGCCR	1 cut(s)	336
AcsI	RAATTY	1 cut(s)	1430
AfaI	GTAC	5 cut(s)	198, 239, 487, 933, 1319
AfiI	CCNNNNNNNGG	4 cut(s)	144, 313, 850, 914
AflII	CTTAAG	1 cut(s)	1484
AgsI	TTSAA	5 cut(s)	175, 345, 752, 959, 1217
AhlI	ACTAGT	1 cut(s)	1579
AjnI	CCWGG	3 cut(s)	400, 913, 1384
AloI	GAACNNNNNNTCC	2 cut(s)	1380, 1412
AluBI	AGCT	4 cut(s)	230, 257, 667, 895
AluI	AGCT	4 cut(s)	230, 257, 667, 895
Alw21I	GWGCWC	2 cut(s)	205, 1376
Alw26I	GTCTC	2 cut(s)	44, 724
AlwI	GGATC	4 cut(s)	626, 1288, 1565, 1578
Ama87I	CYCGRG	1 cut(s)	1335
AoxI	GGCC	3 cut(s)	336, 638, 1092
ApeKI	GCWGC	3 cut(s)	257, 431, 1064
ApoI	RAATTY	1 cut(s)	1430
AspLEI	GCGC	1 cut(s)	18
AspS9I	GGNCC	6 cut(s)	284, 304, 398, 639, 764, 836
AsuHPI	GGTGA	6 cut(s)	63, 86, 428, 431, 641, 1279
AvaI	CYCGRG	1 cut(s)	1335
AvaII	GGWCC	5 cut(s)	284, 304, 398, 764, 836
BaeGI	GKGCMC	1 cut(s)	152
BalI	TGGCCA	1 cut(s)	338
BamHI	GGATCC	1 cut(s)	1570
BanI	GGYRCC	1 cut(s)	147
BbsI	GAAGAC	1 cut(s)	893
Bbv12I	GWGCWC	2 cut(s)	205, 1376
BbvCI	CCTCAGC	1 cut(s)	49
BbvI	GCAGC	3 cut(s)	244, 418, 1051
BccI	CCATC	6 cut(s)	413, 742, 752, 880, 1244, 1433
BceAI	ACGGC	2 cut(s)	448, 1314
BcgI	CGANNNNNNTGC	2 cut(s)	144, 178
BciT130I	CCWGG	3 cut(s)	402, 915, 1386
BciVI	GTATCC	1 cut(s)	1469
BclI	TGATCA	2 cut(s)	688, 1030
BcoDI	GTCTC	2 cut(s)	44, 724
BcuI	ACTAGT	1 cut(s)	1579
BfaI	CTAG	2 cut(s)	1421, 1580
BfmI	CTRYAG	1 cut(s)	1601
BfrI	CTTAAG	1 cut(s)	1484
BfuAI	ACCTGC	4 cut(s)	450, 736, 1000, 1255
BfuI	GTATCC	1 cut(s)	1469
BglII	AGATCT	1 cut(s)	559
BisI	GCNGC	3 cut(s)	258, 432, 1065
BlpI	GCTNAGC	1 cut(s)	492
BlsI	GCNGC	3 cut(s)	259, 433, 1066
BmcAI	AGTACT	1 cut(s)	1319
Bme1390I	CCNGG	3 cut(s)	402, 915, 1386
Bme18I	GGWCC	5 cut(s)	284, 304, 398, 764, 836
BmeT110I	CYCGRG	1 cut(s)	1335
BmgT120I	GGNCC	6 cut(s)	284, 304, 398, 639, 764, 836
BmiI	GGNNCC	5 cut(s)	149, 285, 641, 1080, 1572
BmrFI	CCNGG	3 cut(s)	402, 915, 1386
BmrI	ACTGGG	2 cut(s)	1255, 1477
BmsI	GCATC	3 cut(s)	454, 592, 1238
BmuI	ACTGGG	2 cut(s)	1255, 1477
BpiI	GAAGAC	1 cut(s)	893
Bpu10I	CCTNAGC	1 cut(s)	49
Bpu1102I	GCTNAGC	1 cut(s)	492
BpuEI	CTTGAG	2 cut(s)	936, 1022
Bsa29I	ATCGAT	1 cut(s)	267
BsaJI	CCNNGG	3 cut(s)	120, 625, 635
BsaXI	ACNNNNNCTCC	4 cut(s)	91, 121, 1344, 1374
Bsc4I	CCNNNNNNNGG	4 cut(s)	144, 313, 850, 914
Bse1I	ACTGG	6 cut(s)	307, 511, 528, 1250, 1315, 1472
Bse3DI	GCAATG	2 cut(s)	612, 1095
BseBI	CCWGG	3 cut(s)	402, 915, 1386
BseCI	ATCGAT	1 cut(s)	267
BseDI	CCNNGG	3 cut(s)	120, 625, 635
BseGI	GGATG	1 cut(s)	1255
BseLI	CCNNNNNNNGG	4 cut(s)	144, 313, 850, 914
BseMI	GCAATG	2 cut(s)	612, 1095
BseMII	CTCAG	3 cut(s)	63, 252, 984
BseNI	ACTGG	6 cut(s)	307, 511, 528, 1250, 1315, 1472
BseRI	GAGGAG	6 cut(s)	37, 99, 102, 109, 939, 1019
BseSI	GKGCMC	1 cut(s)	152
BseXI	GCAGC	3 cut(s)	244, 418, 1051
BsgI	GTGCAG	2 cut(s)	191, 1307
Bsh1236I	CGCG	1 cut(s)	1132
BshFI	GGCC	3 cut(s)	338, 640, 1094
BshNI	GGYRCC	1 cut(s)	147
BshVI	ATCGAT	1 cut(s)	267
BsiHKAI	GWGCWC	2 cut(s)	205, 1376
BsiHKCI	CYCGRG	1 cut(s)	1335
BslFI	GGGAC	2 cut(s)	524, 851
BslI	CCNNNNNNNGG	4 cut(s)	144, 313, 850, 914
BsmAI	GTCTC	2 cut(s)	44, 724
BsmFI	GGGAC	2 cut(s)	524, 851
BsnI	GGCC	3 cut(s)	338, 640, 1094
BsoBI	CYCGRG	1 cut(s)	1335
Bsp1286I	GDGCHC	3 cut(s)	152, 205, 1376
Bsp143I	GATC	7 cut(s)	264, 559, 631, 688, 1030, 1280, 1570
Bsp1720I	GCTNAGC	1 cut(s)	492
Bsp68I	TCGCGA	1 cut(s)	1132
BspACI	CCGC	2 cut(s)	414, 1039
BspANI	GGCC	3 cut(s)	338, 640, 1094
BspCNI	CTCAG	3 cut(s)	62, 253, 985
BspDI	ATCGAT	1 cut(s)	267
BspFNI	CGCG	1 cut(s)	1132
BspLI	GGNNCC	5 cut(s)	149, 285, 641, 1080, 1572
BspMI	ACCTGC	4 cut(s)	450, 736, 1000, 1255
BspPI	GGATC	4 cut(s)	626, 1288, 1565, 1578
BspT107I	GGYRCC	1 cut(s)	147
BspTI	CTTAAG	1 cut(s)	1484
BsrDI	GCAATG	2 cut(s)	612, 1095
BsrI	ACTGG	6 cut(s)	307, 511, 528, 1250, 1315, 1472
BssECI	CCNNGG	3 cut(s)	120, 625, 635
BssMI	GATC	7 cut(s)	264, 559, 631, 688, 1030, 1280, 1570
BssNAI	GTATAC	1 cut(s)	1179
BssT1I	CCWWGG	1 cut(s)	635
Bst1107I	GTATAC	1 cut(s)	1179
Bst2UI	CCWGG	3 cut(s)	402, 915, 1386
Bst4CI	ACNGT	3 cut(s)	534, 1166, 1602
Bst6I	CTCTTC	2 cut(s)	47, 1239
BstAFI	CTTAAG	1 cut(s)	1484
BstAPI	GCANNNNNTGC	1 cut(s)	214
BstC8I	GCNNGC	4 cut(s)	1069, 1108, 1367, 1529
BstDEI	CTNAG	5 cut(s)	49, 261, 492, 971, 993
BstDSI	CCRYGG	1 cut(s)	625
BstF5I	GGATG	1 cut(s)	1255
BstFNI	CGCG	1 cut(s)	1132
BstHHI	GCGC	1 cut(s)	18
BstKTI	GATC	7 cut(s)	267, 562, 634, 691, 1033, 1283, 1573
BstMAI	GTCTC	2 cut(s)	44, 724
BstMBI	GATC	7 cut(s)	264, 559, 631, 688, 1030, 1280, 1570
BstMWI	GCNNNNNNNGC	2 cut(s)	214, 1371
BstNI	CCWGG	3 cut(s)	402, 915, 1386
BstNSI	RCATGY	1 cut(s)	1397
BstSCI	CCNGG	3 cut(s)	400, 913, 1384
BstSFI	CTRYAG	1 cut(s)	1601
BstSLI	GKGCMC	1 cut(s)	152
BstUI	CGCG	1 cut(s)	1132
BstV1I	GCAGC	3 cut(s)	244, 418, 1051
BstV2I	GAAGAC	1 cut(s)	893
BstX2I	RGATCY	3 cut(s)	559, 1280, 1570
BstXI	CCANNNNNNTGG	2 cut(s)	741, 1467
BstYI	RGATCY	3 cut(s)	559, 1280, 1570
BstZ17I	GTATAC	1 cut(s)	1179
Bsu15I	ATCGAT	1 cut(s)	267
BsuI	GTATCC	1 cut(s)	1469
BsuRI	GGCC	3 cut(s)	338, 640, 1094
BsuTUI	ATCGAT	1 cut(s)	267
BtgI	CCRYGG	1 cut(s)	625
BtgZI	GCGATG	1 cut(s)	1113
BtsCI	GGATG	1 cut(s)	1255
BtsI	GCAGTG	1 cut(s)	203
BtsIMutI	CAGTG	3 cut(s)	203, 304, 530
BtuMI	TCGCGA	1 cut(s)	1132
BveI	ACCTGC	4 cut(s)	450, 736, 1000, 1255
Cac8I	GCNNGC	4 cut(s)	1069, 1108, 1367, 1529
CfoI	GCGC	1 cut(s)	18
Cfr13I	GGNCC	6 cut(s)	284, 304, 398, 639, 764, 836
ClaI	ATCGAT	1 cut(s)	267
CseI	GACGC	1 cut(s)	253
Csp6I	GTAC	5 cut(s)	197, 238, 486, 932, 1318
CviAII	CATG	5 cut(s)	214, 280, 1226, 1394, 1532
CviQI	GTAC	5 cut(s)	197, 238, 486, 932, 1318
DdeI	CTNAG	5 cut(s)	49, 261, 492, 971, 993
DpnI	GATC	7 cut(s)	266, 561, 633, 690, 1032, 1282, 1572
DpnII	GATC	7 cut(s)	264, 559, 631, 688, 1030, 1280, 1570
EaeI	YGGCCR	1 cut(s)	336
Eam1104I	CTCTTC	2 cut(s)	47, 1239
EarI	CTCTTC	2 cut(s)	47, 1239
Eco130I	CCWWGG	1 cut(s)	635
Eco32I	GATATC	2 cut(s)	730, 1541
Eco47I	GGWCC	5 cut(s)	284, 304, 398, 764, 836
Eco88I	CYCGRG	1 cut(s)	1335
EcoO109I	RGGNCCY	2 cut(s)	284, 639
EcoRII	CCWGG	3 cut(s)	400, 913, 1384
EcoRV	GATATC	2 cut(s)	730, 1541
EcoT14I	CCWWGG	1 cut(s)	635
EcoT22I	ATGCAT	1 cut(s)	1231
ErhI	CCWWGG	1 cut(s)	635
FaeI	CATG	5 cut(s)	217, 283, 1229, 1397, 1535
FalI	AAGNNNNNCTT	2 cut(s)	628, 660
FaqI	GGGAC	2 cut(s)	524, 851
FatI	CATG	5 cut(s)	213, 279, 1225, 1393, 1531
FbaI	TGATCA	2 cut(s)	688, 1030
FblI	GTMKAC	2 cut(s)	1178, 1597
Fnu4HI	GCNGC	3 cut(s)	258, 432, 1065
FokI	GGATG	1 cut(s)	1262
Fsp4HI	GCNGC	3 cut(s)	258, 432, 1065
FspBI	CTAG	2 cut(s)	1421, 1580
FspI	TGCGCA	1 cut(s)	17
GlaI	GCGC	1 cut(s)	17
GluI	GCNGC	3 cut(s)	258, 432, 1065
HaeIII	GGCC	3 cut(s)	338, 640, 1094
HgaI	GACGC	1 cut(s)	253
HhaI	GCGC	1 cut(s)	18
Hin1II	CATG	5 cut(s)	217, 283, 1229, 1397, 1535
Hin6I	GCGC	1 cut(s)	16
HinP1I	GCGC	1 cut(s)	16
HincII	GTYRAC	1 cut(s)	1598
HindII	GTYRAC	1 cut(s)	1598
HindIII	AAGCTT	2 cut(s)	665, 893
HinfI	GANTC	8 cut(s)	21, 274, 294, 527, 936, 1258, 1307, 1594
HphI	GGTGA	6 cut(s)	63, 86, 428, 431, 641, 1279
Hpy166II	GTNNAC	5 cut(s)	304, 839, 932, 1179, 1598
Hpy188I	TCNGA	6 cut(s)	801, 941, 1257, 1300, 1312, 1347
Hpy188III	TCNNGA	5 cut(s)	767, 992, 1001, 1131, 1574
Hpy8I	GTNNAC	5 cut(s)	304, 839, 932, 1179, 1598
HpyAV	CCTTC	6 cut(s)	114, 746, 764, 1271, 1285, 1383
HpyCH4III	ACNGT	3 cut(s)	534, 1166, 1602
HpyF10VI	GCNNNNNNNGC	2 cut(s)	214, 1371
HpyF3I	CTNAG	5 cut(s)	49, 261, 492, 971, 993
Hsp92II	CATG	5 cut(s)	217, 283, 1229, 1397, 1535
HspAI	GCGC	1 cut(s)	16
Ksp22I	TGATCA	2 cut(s)	688, 1030
Kzo9I	GATC	7 cut(s)	264, 559, 631, 688, 1030, 1280, 1570
LmnI	GCTCC	3 cut(s)	811, 1006, 1352
Lsp1109I	GCAGC	3 cut(s)	244, 418, 1051
LweI	GCATC	3 cut(s)	454, 592, 1238
MaeI	CTAG	2 cut(s)	1421, 1580
MaeIII	GTNAC	2 cut(s)	437, 514
MalI	GATC	7 cut(s)	266, 561, 633, 690, 1032, 1282, 1572
MboI	GATC	7 cut(s)	264, 559, 631, 688, 1030, 1280, 1570
MboII	GAAGA	5 cut(s)	34, 569, 893, 1226, 1436
MflI	RGATCY	3 cut(s)	559, 1280, 1570
MhlI	GDGCHC	3 cut(s)	152, 205, 1376
MlsI	TGGCCA	1 cut(s)	338
MluCI	AATT	9 cut(s)	156, 183, 317, 670, 682, 1183, 1430, 1449, 1565
MluNI	TGGCCA	1 cut(s)	338
MlyI	GAGTC	1 cut(s)	1603
MmeI	TCCRAC	2 cut(s)	157, 1542
Mox20I	TGGCCA	1 cut(s)	338
Mph1103I	ATGCAT	1 cut(s)	1231
MscI	TGGCCA	1 cut(s)	338
MseI	TTAA	5 cut(s)	311, 669, 777, 1448, 1485
MslI	CAYNNNNRTG	3 cut(s)	551, 739, 923
Msp20I	TGGCCA	1 cut(s)	338
MspCI	CTTAAG	1 cut(s)	1484
MspR9I	CCNGG	3 cut(s)	402, 915, 1386
MvaI	CCWGG	3 cut(s)	402, 915, 1386
MvnI	CGCG	1 cut(s)	1132
MwoI	GCNNNNNNNGC	2 cut(s)	214, 1371
NdeII	GATC	7 cut(s)	264, 559, 631, 688, 1030, 1280, 1570
NlaIII	CATG	5 cut(s)	217, 283, 1229, 1397, 1535
NlaIV	GGNNCC	5 cut(s)	149, 285, 641, 1080, 1572
NmeAIII	GCCGAG	1 cut(s)	101
NmuCI	GTSAC	2 cut(s)	437, 514
NruI	TCGCGA	1 cut(s)	1132
NsbI	TGCGCA	1 cut(s)	17
NsiI	ATGCAT	1 cut(s)	1231
NspI	RCATGY	1 cut(s)	1397
PaeR7I	CTCGAG	1 cut(s)	1335
PaqCI	CACCTGC	3 cut(s)	450, 1000, 1255
PfeI	GAWTC	7 cut(s)	21, 274, 294, 527, 936, 1258, 1307
PflMI	CCANNNNNTGG	2 cut(s)	313, 850
PfoI	TCCNGGA	2 cut(s)	400, 1384
PkrI	GCNGC	3 cut(s)	259, 433, 1066
PleI	GAGTC	1 cut(s)	1602
PpsI	GAGTC	1 cut(s)	1602
PpuMI	RGGWCCY	1 cut(s)	284
Psp5II	RGGWCCY	1 cut(s)	284
Psp6I	CCWGG	3 cut(s)	400, 913, 1384
PspGI	CCWGG	3 cut(s)	400, 913, 1384
PspN4I	GGNNCC	5 cut(s)	149, 285, 641, 1080, 1572
PspPI	GGNCC	6 cut(s)	284, 304, 398, 639, 764, 836
PspPPI	RGGWCCY	1 cut(s)	284
PspXI	VCTCGAGB	1 cut(s)	1335
PsuI	RGATCY	3 cut(s)	559, 1280, 1570
RruI	TCGCGA	1 cut(s)	1132
RsaI	GTAC	5 cut(s)	198, 239, 487, 933, 1319
RsaNI	GTAC	5 cut(s)	197, 238, 486, 932, 1318
RseI	CAYNNNNRTG	3 cut(s)	551, 739, 923
SalI	GTCGAC	1 cut(s)	1596
SaqAI	TTAA	5 cut(s)	311, 669, 777, 1448, 1485
SatI	GCNGC	3 cut(s)	258, 432, 1065
Sau3AI	GATC	7 cut(s)	264, 559, 631, 688, 1030, 1280, 1570
Sau96I	GGNCC	6 cut(s)	284, 304, 398, 639, 764, 836
ScaI	AGTACT	1 cut(s)	1319
SchI	GAGTC	1 cut(s)	1603
ScrFI	CCNGG	3 cut(s)	402, 915, 1386
SduI	GDGCHC	3 cut(s)	152, 205, 1376
SfaNI	GCATC	3 cut(s)	454, 592, 1238
SfcI	CTRYAG	1 cut(s)	1601
Sfr274I	CTCGAG	1 cut(s)	1335
SinI	GGWCC	5 cut(s)	284, 304, 398, 764, 836
SlaI	CTCGAG	1 cut(s)	1335
SmiMI	CAYNNNNRTG	3 cut(s)	551, 739, 923
SmlI	CTYRAG	4 cut(s)	951, 1001, 1335, 1484
SmoI	CTYRAG	4 cut(s)	951, 1001, 1335, 1484
SpeI	ACTAGT	1 cut(s)	1579
Sse9I	AATT	9 cut(s)	156, 183, 317, 670, 682, 1183, 1430, 1449, 1565
SsiI	CCGC	2 cut(s)	414, 1039
SspMI	CTAG	2 cut(s)	1421, 1580
StyD4I	CCNGG	3 cut(s)	400, 913, 1384
StyI	CCWWGG	1 cut(s)	635
TaaI	ACNGT	3 cut(s)	534, 1166, 1602
TaqI	TCGA	4 cut(s)	267, 1195, 1336, 1597
TasI	AATT	9 cut(s)	156, 183, 317, 670, 682, 1183, 1430, 1449, 1565
TatI	WGTACW	1 cut(s)	1317
TfiI	GAWTC	7 cut(s)	21, 274, 294, 527, 936, 1258, 1307
Tru1I	TTAA	5 cut(s)	311, 669, 777, 1448, 1485
Tru9I	TTAA	5 cut(s)	311, 669, 777, 1448, 1485
TscAI	CASTG	3 cut(s)	210, 304, 537
TseFI	GTSAC	2 cut(s)	437, 514
TseI	GCWGC	3 cut(s)	257, 431, 1064
Tsp45I	GTSAC	2 cut(s)	437, 514
TspDTI	ATGAA	4 cut(s)	47, 535, 609, 1203
TspGWI	ACGGA	1 cut(s)	614
TspRI	CASTG	3 cut(s)	210, 304, 537
Van91I	CCANNNNNTGG	2 cut(s)	313, 850
Vha464I	CTTAAG	1 cut(s)	1484
VpaK11BI	GGWCC	5 cut(s)	284, 304, 398, 764, 836
XapI	RAATTY	1 cut(s)	1430
XceI	RCATGY	1 cut(s)	1397
XcmI	CCANNNNNNNNNTGG	1 cut(s)	851
XhoI	CTCGAG	1 cut(s)	1335
XmiI	GTMKAC	2 cut(s)	1178, 1597
XspI	CTAG	2 cut(s)	1421, 1580
ZrmI	AGTACT	1 cut(s)	1319
Zsp2I	ATGCAT	1 cut(s)	1231

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.