Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003643

Physical Location & Seq

Genomic Coordinates Forward (+)

46820991 .. 46826415

Gene Structure 5425 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1380600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGTGGTCATTGGCACGCAAAACCAGAATAATGACACGTGTCCTCTTCCTAACCCAATTTGGGTTAGTTTCCCAATCGCTCTCTTCCACTTCCATTTCGAACGCTTCCACCTCTTTCTACAACCCTCTCTCCACTGTCTCTGCATTTCTTCAACCAGTTCTGAGCCCTGCAATTCATGCGTTTTGTTCGAACCCCAGCAGCGCAGCGGGAGTTGGGTCTGTAGGCGCAGTACCCAGCATGCAGAATCCGGAGGATATATCGTACCTGACGCAGCGTGAAGCTGCTGAGATCGATGAGATCCTCATGGGTCCTCTCGGCTTCAGCGTCGACCAGTTAATGGAATTGGCTGGTTTGAGCGTGGCCACTTCCATTGCAGAGGTCTATAAACCAAGTGAGTATAATCGAGTCCTTGTGATTTGTGGCCCTGGAAACAACGGTGGTGATGGTCTCGTGGCTGCTCGTCACCTGTATCACTTTGGTTATAAGCTGTCTGTTTGTTATCCAAAGCGTACTGCTAAGCCTCTTTATGCTGGTCTTGTTACGCAACTGGAATCACTGTCAGTCCCCTTCATCTCAGTGGAAGATCTGCCGTTGGACTTGTCAAAGGACTTTGACATTATTGTAGATGCAATGTTCGGTTTCTCATTCCATGGTTCCCCAAGGCCTCCCTTTGATAACCTGATCCAAAAGCTTGTTTGTGTAAAAAAATATGATCAAACTCGCGAAAAGTCTTCTGTTATTGTCTCTGTAGATATTCCATCTGGGTGGCATGTTGAAGGGGATGGTGGTGTCGAAGGCATTAAGCCTGACATGTTGGTTTCTCTGACTGCTCCAAAGTTGTGTGCAAAGAAATTTTTTGGTCCACACCATTTTCTGGGTGGTAGATTTGTCCCACCATCTATTGCTGATAAATATAAGCTTCGCCTTCCACCATATCCAGGCACTTCTATGTGTGTCCGTATTGGAATGCCCCCACAAGTTGATATATCAGCTCTAAGAGAGAACTATATTTCTCCTGAGTTTCTTGAGGAACAGGTGGAGGCTGACCCCTTTGATCAGTTCCGCAAATGGTTCGACGATGTAGTGGCTGCTGGATTGAGGGAACCAAATGCTATGGCATTGTCAACGGCTACCAAGAATGGAAAAATCTCATCACGAATGGTATTGCTCAAAGGATTTGATAAGAACGGTTTTGTCTGGTACACGAACTATGAAAGTCAAAAGGCACATGAATTGTCTGAAAATCCTCGTGCATCTCTTCTTTTCTACTGGGATGGCCTGAATCGGCAGGTGAGAGTGGAAGGGTCTGTGCAGAAAGTTTCTGATGAGGAATCTGATCAATACTTCCATAGCCGTCCTCGAGGCAGTCAGATTGGAGCAATAGTTAGCAAGCAGAGCACTGTTGTTCCTGGAAGGCATGTTCTGTATGACCAATACAAAGAACTAGAAGAAAAATTCTCTGATGGAAGTTTAATTCCAAAACCTAAAAACTGGGGAGGATACAGACTTAAGCCAGAGCTGTTTGAGTTTTGGCAAGGCCAACAATCTCGTTTGCATGACAGGCTGCGATATTCTCCTGAAGAGATCAATGGACAACAAGTGTGGAAAATTGAGCGGTTGGCACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004733 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006081 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006734 GO:0006739 GO:0006753 GO:0006766 GO:0006767 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009987 GO:0016491 GO:0016638 GO:0016641 GO:0016853 GO:0016854 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0031974 GO:0031981 GO:0034356 GO:0034641 GO:0034654 GO:0042364 GO:0042816 GO:0042819 GO:0042822 GO:0042823 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046184 GO:0046483 GO:0046496 GO:0051186 GO:0051188 GO:0052856 GO:0052857 GO:0055086 GO:0055114 GO:0070013 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00750 ko01100 ko01120 map00750 map01100 map01120

Pfam Domains

Protein Families

PNP_phzG_C Putative_PNPOx YjeF_N

Protein Analysis

543

Amino Acids

60.4

Weight (kDa)

6.62

Isoelectric Point (pI)

36.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YjeF_N	PF03853	110 - 281	1.9e-35	YjeF-related protein N-terminus
PNPOx_N	PF01243	359 - 483	3.4e-29	Pyridoxamine 5'-phosphate oxidase
PNP_phzG_C	PF10590	498 - 542	1.5e-19	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49970 AT5G49970
fragaria_vesca	FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940
malus_domestica	MD08G1191800.v1.1 MD15G1380600.v1.1
prunus_persica	Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1
pyrus_communis	pycom08g16530 pycom15g34090
rosa_chinensis	RchiOBHm_Chr7g0237681
rosa_laevigata	RLG00000000977
rosa_multiflora	Rmu_co8471315.1_g000001 Rmu_sc0007826.1_g000003
rosa_roxburghii	Rroxscaffold_3G00223890
rosa_rugosa	Rorug07G0306200 Rorug07G0306300 Rorug07G0306400 Rorug07G0306500
rosa_samantha	Rh7AG462900 Rh7BG433000 Rh7CG479900 Rh7DG448900
rosa_wichuraiana	Rw7G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	483
AarI	CACCTGC	1 cut(s)	1279
AbsI	CCTCGAGG	1 cut(s)	1359
Acc36I	ACCTGC	1 cut(s)	1279
AccB1I	GGYRCC	1 cut(s)	1621
AccB7I	CCANNNNNTGG	2 cut(s)	337, 874
AccBSI	CCGCTC	1 cut(s)	1615
AccI	GTMKAC	1 cut(s)	327
AccII	CGCG	1 cut(s)	723
AccIII	TCCGGA	1 cut(s)	247
AciI	CCGC	3 cut(s)	206, 1063, 1615
AclWI	GGATC	2 cut(s)	292, 676
AcoI	YGGCCR	1 cut(s)	360
AcsI	RAATTY	2 cut(s)	851, 1454
AcuI	CTGAAG	2 cut(s)	304, 1599
AcvI	CACGTG	1 cut(s)	38
AfaI	GTAC	4 cut(s)	231, 263, 511, 1202
AfiI	CCNNNNNNNGG	4 cut(s)	60, 337, 874, 938
AflII	CTTAAG	1 cut(s)	1508
AflIII	ACRYGT	3 cut(s)	35, 37, 810
AgsI	TTSAA	2 cut(s)	152, 776
AjnI	CCWGG	3 cut(s)	424, 937, 1408
AloI	GAACNNNNNNTCC	2 cut(s)	1404, 1436
AluBI	AGCT	6 cut(s)	281, 487, 691, 919, 992, 1519
AluI	AGCT	6 cut(s)	281, 487, 691, 919, 992, 1519
Alw21I	GWGCWC	1 cut(s)	1400
Alw26I	GTCTC	3 cut(s)	142, 452, 748
AlwI	GGATC	2 cut(s)	292, 676
Ama87I	CYCGRG	1 cut(s)	1359
Aor13HI	TCCGGA	1 cut(s)	247
AoxI	GGCC	5 cut(s)	360, 421, 662, 1276, 1537
ApeKI	GCWGC	7 cut(s)	198, 203, 271, 281, 455, 1088, 1564
ApoI	RAATTY	2 cut(s)	851, 1454
AspLEI	GCGC	2 cut(s)	203, 227
AspS9I	GGNCC	3 cut(s)	308, 422, 860
AsuHPI	GGTGA	3 cut(s)	452, 455, 1303
AsuII	TTCGAA	2 cut(s)	98, 188
AvaI	CYCGRG	1 cut(s)	1359
AvaII	GGWCC	2 cut(s)	308, 860
BalI	TGGCCA	1 cut(s)	362
BanI	GGYRCC	1 cut(s)	1621
BanII	GRGCYC	1 cut(s)	167
BauI	CACGAG	2 cut(s)	449, 1248
BbrPI	CACGTG	1 cut(s)	38
BbsI	GAAGAC	1 cut(s)	723
Bbv12I	GWGCWC	1 cut(s)	1400
BbvI	GCAGC	7 cut(s)	210, 215, 268, 283, 442, 1075, 1551
BccI	CCATC	6 cut(s)	437, 766, 776, 904, 1268, 1457
BceAI	ACGGC	3 cut(s)	574, 1143, 1338
BcgI	CGANNNNNNTGC	2 cut(s)	1054, 1088
BciT130I	CCWGG	3 cut(s)	426, 939, 1410
BciVI	GTATCC	1 cut(s)	1493
BclI	TGATCA	3 cut(s)	712, 1054, 1336
BcoDI	GTCTC	3 cut(s)	142, 452, 748
BfaI	CTAG	1 cut(s)	1445
BfmI	CTRYAG	2 cut(s)	219, 747
BfrI	CTTAAG	1 cut(s)	1508
BfuAI	ACCTGC	1 cut(s)	1279
BfuI	GTATCC	1 cut(s)	1493
BglII	AGATCT	1 cut(s)	583
BisI	GCNGC	7 cut(s)	199, 204, 272, 282, 456, 1089, 1565
BlpI	GCTNAGC	1 cut(s)	516
BlsI	GCNGC	7 cut(s)	200, 205, 273, 283, 457, 1090, 1566
Bme1390I	CCNGG	3 cut(s)	426, 939, 1410
Bme18I	GGWCC	2 cut(s)	308, 860
BmeT110I	CYCGRG	1 cut(s)	1359
BmgT120I	GGNCC	3 cut(s)	308, 422, 860
BmiI	GGNNCC	4 cut(s)	309, 655, 1104, 1623
BmrFI	CCNGG	3 cut(s)	426, 939, 1410
BmrI	ACTGGG	2 cut(s)	1279, 1501
BmsI	GCATC	2 cut(s)	616, 1262
BmuI	ACTGGG	2 cut(s)	1279, 1501
BoxI	GACNNNNGTC	1 cut(s)	38
BpiI	GAAGAC	1 cut(s)	723
Bpu1102I	GCTNAGC	1 cut(s)	516
Bpu14I	TTCGAA	2 cut(s)	98, 188
BpuEI	CTTGAG	1 cut(s)	1046
Bsa29I	ATCGAT	1 cut(s)	291
BsaAI	YACGTR	1 cut(s)	38
BsaI	GGTCTC	1 cut(s)	452
BsaJI	CCNNGG	3 cut(s)	424, 649, 659
BsaWI	WCCGGW	1 cut(s)	247
BsaXI	ACNNNNNCTCC	4 cut(s)	113, 143, 1368, 1398
Bsc4I	CCNNNNNNNGG	4 cut(s)	60, 337, 874, 938
Bse1I	ACTGG	5 cut(s)	155, 331, 552, 1274, 1496
Bse3DI	GCAATG	2 cut(s)	369, 636
BseAI	TCCGGA	1 cut(s)	247
BseBI	CCWGG	3 cut(s)	426, 939, 1410
BseCI	ATCGAT	1 cut(s)	291
BseDI	CCNNGG	3 cut(s)	424, 649, 659
BseGI	GGATG	2 cut(s)	787, 1279
BseLI	CCNNNNNNNGG	4 cut(s)	60, 337, 874, 938
BseMI	GCAATG	2 cut(s)	369, 636
BseMII	CTCAG	4 cut(s)	152, 276, 588, 1008
BseNI	ACTGG	5 cut(s)	155, 331, 552, 1274, 1496
BseXI	GCAGC	7 cut(s)	210, 215, 268, 283, 442, 1075, 1551
BseYI	CCCAGC	2 cut(s)	194, 233
BsgI	GTGCAG	1 cut(s)	1331
Bsh1236I	CGCG	1 cut(s)	723
BshFI	GGCC	5 cut(s)	362, 423, 664, 1278, 1539
BshNI	GGYRCC	1 cut(s)	1621
BshVI	ATCGAT	1 cut(s)	291
BsiHKAI	GWGCWC	1 cut(s)	1400
BsiHKCI	CYCGRG	1 cut(s)	1359
BsiSI	CCGG	1 cut(s)	248
BslFI	GGGAC	2 cut(s)	548, 875
BslI	CCNNNNNNNGG	4 cut(s)	60, 337, 874, 938
BsmAI	GTCTC	3 cut(s)	142, 452, 748
BsmFI	GGGAC	2 cut(s)	548, 875
BsmI	GAATGC	1 cut(s)	972
BsnI	GGCC	5 cut(s)	362, 423, 664, 1278, 1539
Bso31I	GGTCTC	1 cut(s)	452
BsoBI	CYCGRG	1 cut(s)	1359
Bsp119I	TTCGAA	2 cut(s)	98, 188
Bsp1286I	GDGCHC	2 cut(s)	167, 1400
Bsp13I	TCCGGA	1 cut(s)	247
Bsp143I	GATC	8 cut(s)	288, 297, 583, 681, 712, 1054, 1336, 1584
Bsp1720I	GCTNAGC	1 cut(s)	516
Bsp19I	CCATGG	1 cut(s)	649
Bsp68I	TCGCGA	1 cut(s)	723
BspACI	CCGC	3 cut(s)	206, 1063, 1615
BspANI	GGCC	5 cut(s)	362, 423, 664, 1278, 1539
BspCNI	CTCAG	4 cut(s)	153, 277, 587, 1009
BspDI	ATCGAT	1 cut(s)	291
BspEI	TCCGGA	1 cut(s)	247
BspFNI	CGCG	1 cut(s)	723
BspLI	GGNNCC	4 cut(s)	309, 655, 1104, 1623
BspMI	ACCTGC	1 cut(s)	1279
BspPI	GGATC	2 cut(s)	292, 676
BspT104I	TTCGAA	2 cut(s)	98, 188
BspT107I	GGYRCC	1 cut(s)	1621
BspTI	CTTAAG	1 cut(s)	1508
BspTNI	GGTCTC	1 cut(s)	452
BsrBI	CCGCTC	1 cut(s)	1615
BsrDI	GCAATG	2 cut(s)	369, 636
BsrI	ACTGG	5 cut(s)	155, 331, 552, 1274, 1496
BssECI	CCNNGG	3 cut(s)	424, 649, 659
BssMI	GATC	8 cut(s)	288, 297, 583, 681, 712, 1054, 1336, 1584
BssSI	CACGAG	2 cut(s)	449, 1248
BssT1I	CCWWGG	2 cut(s)	649, 659
Bst2BI	CACGAG	2 cut(s)	449, 1248
Bst2UI	CCWGG	3 cut(s)	426, 939, 1410
Bst4CI	ACNGT	5 cut(s)	136, 437, 558, 1190, 1402
Bst6I	CTCTTC	4 cut(s)	50, 88, 1263, 1575
BstAFI	CTTAAG	1 cut(s)	1508
BstAPI	GCANNNNNTGC	1 cut(s)	176
BstBAI	YACGTR	1 cut(s)	38
BstBI	TTCGAA	2 cut(s)	98, 188
BstC8I	GCNNGC	3 cut(s)	16, 239, 1391
BstDEI	CTNAG	6 cut(s)	161, 285, 516, 574, 995, 1017
BstDSI	CCRYGG	1 cut(s)	649
BstF5I	GGATG	2 cut(s)	787, 1279
BstFNI	CGCG	1 cut(s)	723
BstHHI	GCGC	2 cut(s)	203, 227
BstKTI	GATC	8 cut(s)	291, 300, 586, 684, 715, 1057, 1339, 1587
BstMAI	GTCTC	3 cut(s)	142, 452, 748
BstMBI	GATC	8 cut(s)	288, 297, 583, 681, 712, 1054, 1336, 1584
BstMWI	GCNNNNNNNGC	3 cut(s)	176, 1395, 1561
BstNI	CCWGG	3 cut(s)	426, 939, 1410
BstNSI	RCATGY	4 cut(s)	241, 773, 814, 1421
BstPAI	GACNNNNGTC	1 cut(s)	38
BstSCI	CCNGG	3 cut(s)	424, 937, 1408
BstSFI	CTRYAG	2 cut(s)	219, 747
BstUI	CGCG	1 cut(s)	723
BstV1I	GCAGC	7 cut(s)	210, 215, 268, 283, 442, 1075, 1551
BstV2I	GAAGAC	1 cut(s)	723
BstX2I	RGATCY	2 cut(s)	297, 583
BstXI	CCANNNNNNTGG	1 cut(s)	765
BstYI	RGATCY	2 cut(s)	297, 583
Bsu15I	ATCGAT	1 cut(s)	291
BsuI	GTATCC	1 cut(s)	1493
BsuRI	GGCC	5 cut(s)	362, 423, 664, 1278, 1539
BsuTUI	ATCGAT	1 cut(s)	291
BtgI	CCRYGG	1 cut(s)	649
BtsCI	GGATG	2 cut(s)	787, 1279
BtsIMutI	CAGTG	4 cut(s)	132, 554, 582, 1398
BtuMI	TCGCGA	1 cut(s)	723
BveI	ACCTGC	1 cut(s)	1279
Cac8I	GCNNGC	3 cut(s)	16, 239, 1391
CfoI	GCGC	2 cut(s)	203, 227
Cfr13I	GGNCC	3 cut(s)	308, 422, 860
ClaI	ATCGAT	1 cut(s)	291
CseI	GACGC	2 cut(s)	277, 313
Csp6I	GTAC	4 cut(s)	230, 262, 510, 1201
CspCI	CAANNNNNGTGG	4 cut(s)	352, 387, 1583, 1618
CviQI	GTAC	4 cut(s)	230, 262, 510, 1201
DdeI	CTNAG	6 cut(s)	161, 285, 516, 574, 995, 1017
DpnI	GATC	8 cut(s)	290, 299, 585, 683, 714, 1056, 1338, 1586
DpnII	GATC	8 cut(s)	288, 297, 583, 681, 712, 1054, 1336, 1584
EaeI	YGGCCR	1 cut(s)	360
Eam1104I	CTCTTC	4 cut(s)	50, 88, 1263, 1575
EarI	CTCTTC	4 cut(s)	50, 88, 1263, 1575
Eco130I	CCWWGG	2 cut(s)	649, 659
Eco147I	AGGCCT	1 cut(s)	664
Eco24I	GRGCYC	1 cut(s)	167
Eco31I	GGTCTC	1 cut(s)	452
Eco47I	GGWCC	2 cut(s)	308, 860
Eco57I	CTGAAG	2 cut(s)	304, 1599
Eco72I	CACGTG	1 cut(s)	38
Eco88I	CYCGRG	1 cut(s)	1359
EcoO109I	RGGNCCY	1 cut(s)	308
EcoRII	CCWGG	3 cut(s)	424, 937, 1408
EcoT14I	CCWWGG	2 cut(s)	649, 659
EcoT38I	GRGCYC	1 cut(s)	167
ErhI	CCWWGG	2 cut(s)	649, 659
FaqI	GGGAC	2 cut(s)	548, 875
FauI	CCCGC	1 cut(s)	199
FbaI	TGATCA	3 cut(s)	712, 1054, 1336
FblI	GTMKAC	1 cut(s)	327
Fnu4HI	GCNGC	7 cut(s)	199, 204, 272, 282, 456, 1089, 1565
FokI	GGATG	2 cut(s)	794, 1286
FriOI	GRGCYC	1 cut(s)	167
Fsp4HI	GCNGC	7 cut(s)	199, 204, 272, 282, 456, 1089, 1565
FspBI	CTAG	1 cut(s)	1445
GlaI	GCGC	2 cut(s)	202, 226
GluI	GCNGC	7 cut(s)	199, 204, 272, 282, 456, 1089, 1565
GsaI	CCCAGC	2 cut(s)	198, 237
HaeIII	GGCC	5 cut(s)	362, 423, 664, 1278, 1539
HapII	CCGG	1 cut(s)	248
HgaI	GACGC	2 cut(s)	277, 313
HhaI	GCGC	2 cut(s)	203, 227
Hin6I	GCGC	2 cut(s)	201, 225
HinP1I	GCGC	2 cut(s)	201, 225
HincII	GTYRAC	2 cut(s)	328, 1125
HindII	GTYRAC	2 cut(s)	328, 1125
HindIII	AAGCTT	2 cut(s)	689, 917
HinfI	GANTC	5 cut(s)	244, 405, 551, 1282, 1331
HpaII	CCGG	1 cut(s)	248
HphI	GGTGA	3 cut(s)	452, 455, 1303
Hpy166II	GTNNAC	4 cut(s)	328, 863, 1125, 1203
Hpy188I	TCNGA	7 cut(s)	162, 825, 1240, 1324, 1336, 1371, 1462
Hpy188III	TCNNGA	6 cut(s)	248, 722, 1016, 1025, 1155, 1577
Hpy8I	GTNNAC	4 cut(s)	328, 863, 1125, 1203
Hpy99I	CGWCG	2 cut(s)	329, 1079
HpyAV	CCTTC	6 cut(s)	577, 770, 788, 935, 1295, 1407
HpyCH4III	ACNGT	5 cut(s)	136, 437, 558, 1190, 1402
HpyCH4IV	ACGT	1 cut(s)	37
HpyCH4V	TGCA	9 cut(s)	143, 170, 241, 374, 629, 845, 1253, 1312, 1555
HpyF10VI	GCNNNNNNNGC	3 cut(s)	176, 1395, 1561
HpyF3I	CTNAG	6 cut(s)	161, 285, 516, 574, 995, 1017
HpySE526I	ACGT	1 cut(s)	37
HspAI	GCGC	2 cut(s)	201, 225
Kpn2I	TCCGGA	1 cut(s)	247
Ksp22I	TGATCA	3 cut(s)	712, 1054, 1336
Kzo9I	GATC	8 cut(s)	288, 297, 583, 681, 712, 1054, 1336, 1584
LmnI	GCTCC	2 cut(s)	835, 1376
Lsp1109I	GCAGC	7 cut(s)	210, 215, 268, 283, 442, 1075, 1551
LweI	GCATC	2 cut(s)	616, 1262
MaeI	CTAG	1 cut(s)	1445
MaeII	ACGT	1 cut(s)	37
MaeIII	GTNAC	2 cut(s)	461, 538
MalI	GATC	8 cut(s)	290, 299, 585, 683, 714, 1056, 1338, 1586
MbiI	CCGCTC	1 cut(s)	1615
MboI	GATC	8 cut(s)	288, 297, 583, 681, 712, 1054, 1336, 1584
MboII	GAAGA	8 cut(s)	37, 75, 140, 593, 723, 1250, 1460, 1592
MflI	RGATCY	2 cut(s)	297, 583
MhlI	GDGCHC	2 cut(s)	167, 1400
MlsI	TGGCCA	1 cut(s)	362
MluCI	AATT	8 cut(s)	56, 171, 341, 851, 1232, 1454, 1473, 1608
MluNI	TGGCCA	1 cut(s)	362
MlyI	GAGTC	1 cut(s)	414
MmeI	TCCRAC	1 cut(s)	573
Mox20I	TGGCCA	1 cut(s)	362
MroI	TCCGGA	1 cut(s)	247
MscI	TGGCCA	1 cut(s)	362
MseI	TTAA	4 cut(s)	335, 801, 1472, 1509
MslI	CAYNNNNRTG	3 cut(s)	575, 763, 947
Msp20I	TGGCCA	1 cut(s)	362
MspA1I	CMGCKG	1 cut(s)	206
MspCI	CTTAAG	1 cut(s)	1508
MspI	CCGG	1 cut(s)	248
MspR9I	CCNGG	3 cut(s)	426, 939, 1410
Mva1269I	GAATGC	1 cut(s)	972
MvaI	CCWGG	3 cut(s)	426, 939, 1410
MvnI	CGCG	1 cut(s)	723
MwoI	GCNNNNNNNGC	3 cut(s)	176, 1395, 1561
NcoI	CCATGG	1 cut(s)	649
NdeII	GATC	8 cut(s)	288, 297, 583, 681, 712, 1054, 1336, 1584
NlaIV	GGNNCC	4 cut(s)	309, 655, 1104, 1623
NmeAIII	GCCGAG	1 cut(s)	294
NmuCI	GTSAC	1 cut(s)	461
NruI	TCGCGA	1 cut(s)	723
NspI	RCATGY	4 cut(s)	241, 773, 814, 1421
NspV	TTCGAA	2 cut(s)	98, 188
PaeI	GCATGC	1 cut(s)	241
PaeR7I	CTCGAG	1 cut(s)	1359
PaqCI	CACCTGC	1 cut(s)	1279
PceI	AGGCCT	1 cut(s)	664
PciI	ACATGT	1 cut(s)	810
PcsI	WCGNNNNNNNCGW	1 cut(s)	321
PctI	GAATGC	1 cut(s)	972
PfeI	GAWTC	4 cut(s)	244, 551, 1282, 1331
PflMI	CCANNNNNTGG	2 cut(s)	337, 874
PfoI	TCCNGGA	1 cut(s)	1408
PkrI	GCNGC	7 cut(s)	200, 205, 273, 283, 457, 1090, 1566
PleI	GAGTC	1 cut(s)	413
PmaCI	CACGTG	1 cut(s)	38
PmlI	CACGTG	1 cut(s)	38
PpsI	GAGTC	1 cut(s)	413
Ppu21I	YACGTR	1 cut(s)	38
PpuMI	RGGWCCY	1 cut(s)	308
PscI	ACATGT	1 cut(s)	810
PshAI	GACNNNNGTC	1 cut(s)	38
PsiI	TTATAA	1 cut(s)	483
Psp5II	RGGWCCY	1 cut(s)	308
Psp6I	CCWGG	3 cut(s)	424, 937, 1408
PspCI	CACGTG	1 cut(s)	38
PspFI	CCCAGC	2 cut(s)	194, 233
PspGI	CCWGG	3 cut(s)	424, 937, 1408
PspN4I	GGNNCC	4 cut(s)	309, 655, 1104, 1623
PspPI	GGNCC	3 cut(s)	308, 422, 860
PspPPI	RGGWCCY	1 cut(s)	308
PspXI	VCTCGAGB	1 cut(s)	1359
PsuI	RGATCY	2 cut(s)	297, 583
RruI	TCGCGA	1 cut(s)	723
RsaI	GTAC	4 cut(s)	231, 263, 511, 1202
RsaNI	GTAC	4 cut(s)	230, 262, 510, 1201
RseI	CAYNNNNRTG	3 cut(s)	575, 763, 947
SalI	GTCGAC	1 cut(s)	326
SaqAI	TTAA	4 cut(s)	335, 801, 1472, 1509
SatI	GCNGC	7 cut(s)	199, 204, 272, 282, 456, 1089, 1565
Sau3AI	GATC	8 cut(s)	288, 297, 583, 681, 712, 1054, 1336, 1584
Sau96I	GGNCC	3 cut(s)	308, 422, 860
SchI	GAGTC	1 cut(s)	414
ScrFI	CCNGG	3 cut(s)	426, 939, 1410
SduI	GDGCHC	2 cut(s)	167, 1400
SfaNI	GCATC	2 cut(s)	616, 1262
SfcI	CTRYAG	2 cut(s)	219, 747
Sfr274I	CTCGAG	1 cut(s)	1359
SfuI	TTCGAA	2 cut(s)	98, 188
SinI	GGWCC	2 cut(s)	308, 860
SlaI	CTCGAG	1 cut(s)	1359
SmiMI	CAYNNNNRTG	3 cut(s)	575, 763, 947
SmlI	CTYRAG	3 cut(s)	1025, 1359, 1508
SmoI	CTYRAG	3 cut(s)	1025, 1359, 1508
SphI	GCATGC	1 cut(s)	241
Sse9I	AATT	8 cut(s)	56, 171, 341, 851, 1232, 1454, 1473, 1608
SseBI	AGGCCT	1 cut(s)	664
SsiI	CCGC	3 cut(s)	206, 1063, 1615
SspMI	CTAG	1 cut(s)	1445
StuI	AGGCCT	1 cut(s)	664
StyD4I	CCNGG	3 cut(s)	424, 937, 1408
StyI	CCWWGG	2 cut(s)	649, 659
TaaI	ACNGT	5 cut(s)	136, 437, 558, 1190, 1402
TaiI	ACGT	1 cut(s)	40
TaqI	TCGA	8 cut(s)	98, 188, 291, 327, 403, 792, 1074, 1360
TasI	AATT	8 cut(s)	56, 171, 341, 851, 1232, 1454, 1473, 1608
TfiI	GAWTC	4 cut(s)	244, 551, 1282, 1331
Tru1I	TTAA	4 cut(s)	335, 801, 1472, 1509
Tru9I	TTAA	4 cut(s)	335, 801, 1472, 1509
TscAI	CASTG	4 cut(s)	139, 561, 582, 1405
TseFI	GTSAC	1 cut(s)	461
TseI	GCWGC	7 cut(s)	198, 203, 271, 281, 455, 1088, 1564
Tsp45I	GTSAC	1 cut(s)	461
TspDTI	ATGAA	4 cut(s)	164, 559, 1227, 1245
TspGWI	ACGGA	1 cut(s)	947
TspRI	CASTG	4 cut(s)	139, 561, 582, 1405
Van91I	CCANNNNNTGG	2 cut(s)	337, 874
Vha464I	CTTAAG	1 cut(s)	1508
VpaK11BI	GGWCC	2 cut(s)	308, 860
XapI	RAATTY	2 cut(s)	851, 1454
XceI	RCATGY	4 cut(s)	241, 773, 814, 1421
XcmI	CCANNNNNNNNNTGG	1 cut(s)	875
XhoI	CTCGAG	1 cut(s)	1359
XmiI	GTMKAC	1 cut(s)	327
XspI	CTAG	1 cut(s)	1445

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.