Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0003643

Physical Location & Seq

Genomic Coordinates Reverse (-)

30717471 .. 30719826

Gene Structure 2356 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0306400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

ATGGCAATTGCAGCAACGAGCAGGATGAGCCACGAAGAAGACGAGTCGAACAAGCAGGGCAATCATCATGATGAGGTTGATGACGAGCATGAGCATGACATGGTGATGCCGGGCTTTCGCTTCCACCCAACTGAAGAAGAACTGATAGAGTTTTACCTTCGCCGTAAGGTGGAGGGCAAGCGCTTCAATGTCGAACTGATTACTTTTCTCGACCTTTATCGCTATGACCCTTGGGAACTTCCAGCTATGGCCGCGATTGGAGAGAAGGAGTGGTTCTTTTATGTCCCGAGAGACAGAAAGTACCGGAACGGCGACAGGCCCAACCGTGTGACCACATCTGGATACTGGAAGGCAACTGGAGCCGATCGGATGATTCGAAGCGAGAACTTCCGGTCAATCGGATTGAAGAAAACCCTAGTTTTCTACTCTGGGAAAGCCCCCAAAGGCATTCGAACTAGCTGGATCATGAACGAGTATCGCTTGCCCCATCATGAAACTGAACGATATCAAAAGGGAGAAATATCCCTTTGCCGAGTTTACAAGAGACCCGGAGTGGAAGACCACCCGTCGCTGCCTCGTTCTCTGCCGTCATCCAGAGCCGCCGTTAATGCTAATAATGCATCCACATCAAGATCAGTACTGGCTCAGTCTTCCTCCTCGTCCACCTTAGACAAAAAGCAGCACAGCATTAACAGTAGTTTGATGGAAAAACTCCAAGCTAATTTTAACTTCAATGGAGGGTCGCCGTCACTTGGCCAATCTGTAGAACAACTTCATCATCATCAAGATCAGGTGGCTGCGGATCCAAAGATTAACGAAACGGAAGGAAGTAGTGGGAATTCGGATGTGACAAGCACGCTCGGCGTTGGCCTCCGTAGTAGTGCTCCTAATATTCCTCCAATTCATCTTCCATCATCGTCACTCGGACTACAACCTCATCACCATCACCATGGAGGAGTCCTACACCTCGATGATCAGGCCGAACAAGAGGGGATGTCGACATTCTTGCAGCAGCACCACCACCACTCAAAGCCACAATCAATGCTGTTCGCCGGATCTTCTGTTTCGTCCACGTCTAACCCGATTGATGATCTTCAAAGACTCTTGAATTACCAACAACAGCAAGCAGTTTCCAACATTGCCAATCAACAACAAGCTTTACATGTACAACAATACTATGATGCTCATAATCATAATCACCACCACCACCACCAAGTACCTAGCAACGTGGTTAACCATTTCTCCAGTCCTTTCCCATTGGTACCTCCTCCATCGTCGCAGTCTCAGCTCTCCCCCAACGGACTTCCAATAACTGCTTTCTCCGACCGCCTTTGGGACTGGAATCCAATCTCAGAACCAAACAGGGCGCCCGATCAGTACAACACCAATCCATTCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004733 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006081 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006734 GO:0006739 GO:0006753 GO:0006766 GO:0006767 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009110 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009987 GO:0016491 GO:0016638 GO:0016641 GO:0016853 GO:0016854 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0031974 GO:0031981 GO:0034356 GO:0034641 GO:0034654 GO:0042364 GO:0042816 GO:0042819 GO:0042822 GO:0042823 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046184 GO:0046483 GO:0046496 GO:0051186 GO:0051188 GO:0052856 GO:0052857 GO:0055086 GO:0055114 GO:0070013 GO:0071704 GO:0072524 GO:0072525 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00750 ko01100 ko01120 map00750 map01100 map01120

Pfam Domains

Protein Families

PNP_phzG_C Putative_PNPOx YjeF_N

Protein Analysis

466

Amino Acids

52.8

Weight (kDa)

6.55

Isoelectric Point (pI)

59.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	37 - 161	7.1e-45	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49970 AT5G49970
fragaria_vesca	FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940 FvH4_5g35940
malus_domestica	MD08G1191800.v1.1 MD15G1380600.v1.1
prunus_persica	Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1 Prupe.1G526800_v2.0.a1
pyrus_communis	pycom08g16530 pycom15g34090
rosa_chinensis	RchiOBHm_Chr7g0237681
rosa_laevigata	RLG00000000977
rosa_multiflora	Rmu_co8471315.1_g000001 Rmu_sc0007826.1_g000003
rosa_roxburghii	Rroxscaffold_3G00223890
rosa_rugosa	Rorug07G0306200 Rorug07G0306300 Rorug07G0306400 Rorug07G0306500
rosa_samantha	Rh7AG462900 Rh7BG433000 Rh7CG479900 Rh7DG448900
rosa_wichuraiana	Rw7G038290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1261
AccB1I	GGYRCC	2 cut(s)	1261, 1366
AccI	GTMKAC	1 cut(s)	998
AccII	CGCG	1 cut(s)	254
AciI	CCGC	4 cut(s)	252, 600, 800, 1327
AclWI	GGATC	4 cut(s)	470, 797, 810, 1063
AcoI	YGGCCR	2 cut(s)	249, 754
AcsI	RAATTY	1 cut(s)	838
AcuI	CTGAAG	1 cut(s)	153
AcyI	GRCGYC	1 cut(s)	1367
AfaI	GTAC	6 cut(s)	302, 639, 1167, 1218, 1263, 1379
AfeI	AGCGCT	1 cut(s)	182
AfiI	CCNNNNNNNGG	3 cut(s)	169, 752, 1333
AflIII	ACRYGT	1 cut(s)	1162
AgsI	TTSAA	6 cut(s)	187, 406, 733, 1097, 1108, 1396
AhdI	GACNNNNNGTC	1 cut(s)	565
AjiI	CACGTC	1 cut(s)	1074
AluBI	AGCT	5 cut(s)	245, 459, 719, 1157, 1288
AluI	AGCT	5 cut(s)	245, 459, 719, 1157, 1288
Alw21I	GWGCWC	1 cut(s)	886
Alw26I	GTCTC	3 cut(s)	285, 538, 1287
AlwI	GGATC	4 cut(s)	470, 797, 810, 1063
Ama87I	CYCGRG	1 cut(s)	286
Aor51HI	AGCGCT	1 cut(s)	182
AoxI	GGCC	5 cut(s)	249, 317, 754, 868, 978
ApeKI	GCWGC	6 cut(s)	11, 571, 679, 797, 1009, 1012
ApoI	RAATTY	1 cut(s)	838
Asp700I	GAANNNNTTC	1 cut(s)	771
Asp718I	GGTACC	1 cut(s)	1261
AspLEI	GCGC	2 cut(s)	183, 1369
AspS9I	GGNCC	1 cut(s)	318
AsuC2I	CCSGG	2 cut(s)	111, 549
AsuHPI	GGTGA	4 cut(s)	115, 932, 938, 1190
AsuII	TTCGAA	2 cut(s)	376, 451
AvaI	CYCGRG	1 cut(s)	286
BalI	TGGCCA	1 cut(s)	756
BamHI	GGATCC	1 cut(s)	802
BanI	GGYRCC	2 cut(s)	1261, 1366
BarI	GAAGNNNNNNTAC	2 cut(s)	756, 788
BbsI	GAAGAC	3 cut(s)	45, 564, 642
Bbv12I	GWGCWC	1 cut(s)	886
BbvI	GCAGC	6 cut(s)	23, 558, 691, 784, 1021, 1024
BccI	CCATC	5 cut(s)	495, 697, 919, 951, 1279
BceAI	ACGGC	5 cut(s)	147, 325, 571, 587, 730
BcgI	CGANNNNNNTGC	2 cut(s)	988, 1022
BciVI	GTATCC	1 cut(s)	335
BclI	TGATCA	1 cut(s)	973
BcnI	CCSGG	2 cut(s)	111, 549
BcoDI	GTCTC	3 cut(s)	285, 538, 1287
BfaI	CTAG	3 cut(s)	416, 456, 1221
BfmI	CTRYAG	1 cut(s)	762
BfoI	RGCGCY	2 cut(s)	184, 1370
BfuI	GTATCC	1 cut(s)	335
BisI	GCNGC	8 cut(s)	12, 252, 572, 600, 680, 798, 1010, 1013
BlsI	GCNGC	8 cut(s)	13, 253, 573, 601, 681, 799, 1011, 1014
BmcAI	AGTACT	1 cut(s)	639
Bme1390I	CCNGG	2 cut(s)	111, 549
BmeRI	GACNNNNNGTC	1 cut(s)	565
BmeT110I	CYCGRG	1 cut(s)	286
BmgBI	CACGTC	1 cut(s)	1074
BmgT120I	GGNCC	1 cut(s)	318
BmiI	GGNNCC	4 cut(s)	361, 804, 1263, 1368
BmrFI	CCNGG	2 cut(s)	111, 549
BmsI	GCATC	3 cut(s)	96, 629, 1171
BpiI	GAAGAC	3 cut(s)	45, 564, 642
BpmI	CTGGAG	2 cut(s)	378, 1228
Bpu14I	TTCGAA	2 cut(s)	376, 451
BpuMI	CCSGG	2 cut(s)	111, 549
BsaHI	GRCGYC	1 cut(s)	1367
BsaI	GGTCTC	1 cut(s)	538
BsaJI	CCNNGG	2 cut(s)	230, 949
BsaWI	WCCGGW	2 cut(s)	303, 390
BsaXI	ACNNNNNCTCC	2 cut(s)	1226, 1256
Bsc4I	CCNNNNNNNGG	3 cut(s)	169, 752, 1333
Bse1I	ACTGG	5 cut(s)	350, 361, 645, 1245, 1343
Bse3DI	GCAATG	1 cut(s)	1137
BseDI	CCNNGG	2 cut(s)	230, 949
BseGI	GGATG	6 cut(s)	30, 375, 590, 620, 850, 999
BseLI	CCNNNNNNNGG	3 cut(s)	169, 752, 1333
BseMI	GCAATG	1 cut(s)	1137
BseMII	CTCAG	3 cut(s)	659, 1298, 1365
BseNI	ACTGG	5 cut(s)	350, 361, 645, 1245, 1343
BseRI	GAGGAG	3 cut(s)	646, 969, 1257
BseXI	GCAGC	6 cut(s)	23, 558, 691, 784, 1021, 1024
Bsh1236I	CGCG	1 cut(s)	254
Bsh1285I	CGRYCG	2 cut(s)	367, 1327
BshFI	GGCC	5 cut(s)	251, 319, 756, 870, 980
BshNI	GGYRCC	2 cut(s)	1261, 1366
BsiEI	CGRYCG	2 cut(s)	367, 1327
BsiHKAI	GWGCWC	1 cut(s)	886
BsiHKCI	CYCGRG	1 cut(s)	286
BsiSI	CCGG	5 cut(s)	110, 304, 391, 549, 1053
BslFI	GGGAC	2 cut(s)	269, 1349
BslI	CCNNNNNNNGG	3 cut(s)	169, 752, 1333
BsmAI	GTCTC	3 cut(s)	285, 538, 1287
BsmFI	GGGAC	2 cut(s)	269, 1349
BsmI	GAATGC	1 cut(s)	447
BsnI	GGCC	5 cut(s)	251, 319, 756, 870, 980
Bso31I	GGTCTC	1 cut(s)	538
BsoBI	CYCGRG	1 cut(s)	286
Bsp119I	TTCGAA	2 cut(s)	376, 451
Bsp1286I	GDGCHC	1 cut(s)	886
Bsp1407I	TGTACA	1 cut(s)	1165
Bsp143I	GATC	9 cut(s)	364, 462, 632, 787, 802, 973, 1055, 1090, 1372
Bsp19I	CCATGG	1 cut(s)	949
BspACI	CCGC	4 cut(s)	252, 600, 800, 1327
BspANI	GGCC	5 cut(s)	251, 319, 756, 870, 980
BspCNI	CTCAG	3 cut(s)	658, 1297, 1364
BspFNI	CGCG	1 cut(s)	254
BspHI	TCATGA	3 cut(s)	67, 465, 490
BspLI	GGNNCC	4 cut(s)	361, 804, 1263, 1368
BspPI	GGATC	4 cut(s)	470, 797, 810, 1063
BspT104I	TTCGAA	2 cut(s)	376, 451
BspT107I	GGYRCC	2 cut(s)	1261, 1366
BspTNI	GGTCTC	1 cut(s)	538
BsrDI	GCAATG	1 cut(s)	1137
BsrGI	TGTACA	1 cut(s)	1165
BsrI	ACTGG	5 cut(s)	350, 361, 645, 1245, 1343
BssECI	CCNNGG	2 cut(s)	230, 949
BssMI	GATC	9 cut(s)	364, 462, 632, 787, 802, 973, 1055, 1090, 1372
BssNI	GRCGYC	1 cut(s)	1367
BssT1I	CCWWGG	2 cut(s)	230, 949
Bst4CI	ACNGT	2 cut(s)	326, 695
BstACI	GRCGYC	1 cut(s)	1367
BstAUI	TGTACA	1 cut(s)	1165
BstBI	TTCGAA	2 cut(s)	376, 451
BstC8I	GCNNGC	4 cut(s)	179, 482, 857, 1125
BstDEI	CTNAG	4 cut(s)	645, 667, 1284, 1351
BstDSI	CCRYGG	1 cut(s)	949
BstF5I	GGATG	6 cut(s)	30, 375, 590, 620, 850, 999
BstFNI	CGCG	1 cut(s)	254
BstH2I	RGCGCY	2 cut(s)	184, 1370
BstHHI	GCGC	2 cut(s)	183, 1369
BstKTI	GATC	9 cut(s)	367, 465, 635, 790, 805, 976, 1058, 1093, 1375
BstMAI	GTCTC	3 cut(s)	285, 538, 1287
BstMBI	GATC	9 cut(s)	364, 462, 632, 787, 802, 973, 1055, 1090, 1372
BstMCI	CGRYCG	2 cut(s)	367, 1327
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 27, 251, 359, 608, 617, 861, 1285
BstNSI	RCATGY	1 cut(s)	1166
BstSCI	CCNGG	2 cut(s)	109, 547
BstSFI	CTRYAG	1 cut(s)	762
BstUI	CGCG	1 cut(s)	254
BstV1I	GCAGC	6 cut(s)	23, 558, 691, 784, 1021, 1024
BstV2I	GAAGAC	3 cut(s)	45, 564, 642
BstX2I	RGATCY	2 cut(s)	802, 1055
BstXI	CCANNNNNNTGG	1 cut(s)	950
BstYI	RGATCY	2 cut(s)	802, 1055
BsuI	GTATCC	1 cut(s)	335
BsuRI	GGCC	5 cut(s)	251, 319, 756, 870, 980
BtgI	CCRYGG	1 cut(s)	949
BtrI	CACGTC	1 cut(s)	1074
BtsCI	GGATG	6 cut(s)	30, 375, 590, 620, 850, 999
Cac8I	GCNNGC	4 cut(s)	179, 482, 857, 1125
CciI	TCATGA	3 cut(s)	67, 465, 490
CfoI	GCGC	2 cut(s)	183, 1369
Cfr13I	GGNCC	1 cut(s)	318
Csp6I	GTAC	6 cut(s)	301, 638, 1166, 1217, 1262, 1378
CviAII	CATG	8 cut(s)	68, 89, 95, 100, 466, 491, 950, 1163
CviQI	GTAC	6 cut(s)	301, 638, 1166, 1217, 1262, 1378
DdeI	CTNAG	4 cut(s)	645, 667, 1284, 1351
DinI	GGCGCC	1 cut(s)	1368
DpnI	GATC	9 cut(s)	366, 464, 634, 789, 804, 975, 1057, 1092, 1374
DpnII	GATC	9 cut(s)	364, 462, 632, 787, 802, 973, 1055, 1090, 1372
DriI	GACNNNNNGTC	1 cut(s)	565
EaeI	YGGCCR	2 cut(s)	249, 754
Eam1105I	GACNNNNNGTC	1 cut(s)	565
Eco130I	CCWWGG	2 cut(s)	230, 949
Eco31I	GGTCTC	1 cut(s)	538
Eco32I	GATATC	1 cut(s)	506
Eco47III	AGCGCT	1 cut(s)	182
Eco57I	CTGAAG	1 cut(s)	153
Eco88I	CYCGRG	1 cut(s)	286
EcoRI	GAATTC	1 cut(s)	838
EcoRV	GATATC	1 cut(s)	506
EcoT14I	CCWWGG	2 cut(s)	230, 949
EcoT22I	ATGCAT	1 cut(s)	622
EgeI	GGCGCC	1 cut(s)	1368
EheI	GGCGCC	1 cut(s)	1368
ErhI	CCWWGG	2 cut(s)	230, 949
FaeI	CATG	8 cut(s)	71, 92, 98, 103, 469, 494, 953, 1166
FaqI	GGGAC	2 cut(s)	269, 1349
FatI	CATG	8 cut(s)	67, 88, 94, 99, 465, 490, 949, 1162
FbaI	TGATCA	1 cut(s)	973
FblI	GTMKAC	1 cut(s)	998
Fnu4HI	GCNGC	8 cut(s)	12, 252, 572, 600, 680, 798, 1010, 1013
FokI	GGATG	6 cut(s)	37, 382, 577, 607, 857, 1006
Fsp4HI	GCNGC	8 cut(s)	12, 252, 572, 600, 680, 798, 1010, 1013
FspBI	CTAG	3 cut(s)	416, 456, 1221
GlaI	GCGC	2 cut(s)	182, 1368
GluI	GCNGC	8 cut(s)	12, 252, 572, 600, 680, 798, 1010, 1013
GsuI	CTGGAG	2 cut(s)	378, 1228
HaeII	RGCGCY	2 cut(s)	184, 1370
HaeIII	GGCC	5 cut(s)	251, 319, 756, 870, 980
HapII	CCGG	5 cut(s)	110, 304, 391, 549, 1053
HhaI	GCGC	2 cut(s)	183, 1369
Hin1I	GRCGYC	1 cut(s)	1367
Hin1II	CATG	8 cut(s)	71, 92, 98, 103, 469, 494, 953, 1166
Hin6I	GCGC	2 cut(s)	181, 1367
HinP1I	GCGC	2 cut(s)	181, 1367
HincII	GTYRAC	2 cut(s)	999, 1234
HindII	GTYRAC	2 cut(s)	999, 1234
HindIII	AAGCTT	1 cut(s)	1155
HinfI	GANTC	5 cut(s)	44, 373, 957, 1101, 1342
HpaI	GTTAAC	1 cut(s)	1234
HpaII	CCGG	5 cut(s)	110, 304, 391, 549, 1053
HphI	GGTGA	4 cut(s)	115, 932, 938, 1190
Hpy166II	GTNNAC	5 cut(s)	538, 663, 999, 1071, 1234
Hpy188I	TCNGA	6 cut(s)	369, 401, 844, 926, 1324, 1354
Hpy8I	GTNNAC	5 cut(s)	538, 663, 999, 1071, 1234
Hpy99I	CGWCG	2 cut(s)	571, 1279
HpyAV	CCTTC	4 cut(s)	167, 259, 343, 818
HpyCH4III	ACNGT	2 cut(s)	326, 695
HpyCH4IV	ACGT	2 cut(s)	1073, 1227
HpyCH4V	TGCA	3 cut(s)	11, 620, 1009
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 27, 251, 359, 608, 617, 861, 1285
HpyF3I	CTNAG	4 cut(s)	645, 667, 1284, 1351
HpySE526I	ACGT	2 cut(s)	1073, 1227
Hsp92I	GRCGYC	1 cut(s)	1367
Hsp92II	CATG	8 cut(s)	71, 92, 98, 103, 469, 494, 953, 1166
HspAI	GCGC	2 cut(s)	181, 1367
KasI	GGCGCC	1 cut(s)	1366
KpnI	GGTACC	1 cut(s)	1265
Ksp22I	TGATCA	1 cut(s)	973
KspAI	GTTAAC	1 cut(s)	1234
Kzo9I	GATC	9 cut(s)	364, 462, 632, 787, 802, 973, 1055, 1090, 1372
LmnI	GCTCC	2 cut(s)	359, 889
Lsp1109I	GCAGC	6 cut(s)	23, 558, 691, 784, 1021, 1024
LweI	GCATC	3 cut(s)	96, 629, 1171
MaeI	CTAG	3 cut(s)	416, 456, 1221
MaeII	ACGT	2 cut(s)	1073, 1227
MaeIII	GTNAC	4 cut(s)	328, 747, 847, 918
MalI	GATC	9 cut(s)	366, 464, 634, 789, 804, 975, 1057, 1092, 1374
MboI	GATC	9 cut(s)	364, 462, 632, 787, 802, 973, 1055, 1090, 1372
MfeI	CAATTG	1 cut(s)	6
MflI	RGATCY	2 cut(s)	802, 1055
MhlI	GDGCHC	1 cut(s)	886
MlsI	TGGCCA	1 cut(s)	756
MluCI	AATT	5 cut(s)	6, 721, 838, 900, 1108
MluNI	TGGCCA	1 cut(s)	756
Mly113I	GGCGCC	1 cut(s)	1367
MlyI	GAGTC	3 cut(s)	53, 966, 1095
MmeI	TCCRAC	2 cut(s)	1158, 1347
Mox20I	TGGCCA	1 cut(s)	756
Mph1103I	ATGCAT	1 cut(s)	622
MroXI	GAANNNNTTC	1 cut(s)	771
MscI	TGGCCA	1 cut(s)	756
MseI	TTAA	5 cut(s)	606, 690, 726, 813, 1233
MslI	CAYNNNNRTG	5 cut(s)	69, 93, 104, 948, 969
Msp20I	TGGCCA	1 cut(s)	756
MspI	CCGG	5 cut(s)	110, 304, 391, 549, 1053
MspR9I	CCNGG	2 cut(s)	111, 549
MunI	CAATTG	1 cut(s)	6
Mva1269I	GAATGC	1 cut(s)	447
MvnI	CGCG	1 cut(s)	254
MwoI	GCNNNNNNNGC	8 cut(s)	11, 27, 251, 359, 608, 617, 861, 1285
NarI	GGCGCC	1 cut(s)	1367
NciI	CCSGG	2 cut(s)	111, 549
NcoI	CCATGG	1 cut(s)	949
NdeII	GATC	9 cut(s)	364, 462, 632, 787, 802, 973, 1055, 1090, 1372
NlaIII	CATG	8 cut(s)	71, 92, 98, 103, 469, 494, 953, 1166
NlaIV	GGNNCC	4 cut(s)	361, 804, 1263, 1368
NmeAIII	GCCGAG	2 cut(s)	557, 840
NmuCI	GTSAC	4 cut(s)	328, 747, 847, 918
NsiI	ATGCAT	1 cut(s)	622
NspI	RCATGY	1 cut(s)	1166
NspV	TTCGAA	2 cut(s)	376, 451
PagI	TCATGA	3 cut(s)	67, 465, 490
PciI	ACATGT	1 cut(s)	1162
PcsI	WCGNNNNNNNCGW	3 cut(s)	39, 373, 1079
PctI	GAATGC	1 cut(s)	447
PdmI	GAANNNNTTC	1 cut(s)	771
PfeI	GAWTC	2 cut(s)	373, 1342
PkrI	GCNGC	8 cut(s)	13, 253, 573, 601, 681, 799, 1011, 1014
Ple19I	CGATCG	1 cut(s)	367
PleI	GAGTC	3 cut(s)	52, 965, 1095
PluTI	GGCGCC	1 cut(s)	1370
PpsI	GAGTC	3 cut(s)	52, 965, 1095
PscI	ACATGT	1 cut(s)	1162
PspN4I	GGNNCC	4 cut(s)	361, 804, 1263, 1368
PspPI	GGNCC	1 cut(s)	318
PsuI	RGATCY	2 cut(s)	802, 1055
PvuI	CGATCG	1 cut(s)	367
RsaI	GTAC	6 cut(s)	302, 639, 1167, 1218, 1263, 1379
RsaNI	GTAC	6 cut(s)	301, 638, 1166, 1217, 1262, 1378
RseI	CAYNNNNRTG	5 cut(s)	69, 93, 104, 948, 969
SalI	GTCGAC	1 cut(s)	997
SaqAI	TTAA	5 cut(s)	606, 690, 726, 813, 1233
SatI	GCNGC	8 cut(s)	12, 252, 572, 600, 680, 798, 1010, 1013
Sau3AI	GATC	9 cut(s)	364, 462, 632, 787, 802, 973, 1055, 1090, 1372
Sau96I	GGNCC	1 cut(s)	318
ScaI	AGTACT	1 cut(s)	639
SchI	GAGTC	3 cut(s)	53, 966, 1095
ScrFI	CCNGG	2 cut(s)	111, 549
SduI	GDGCHC	1 cut(s)	886
SfaNI	GCATC	3 cut(s)	96, 629, 1171
SfcI	CTRYAG	1 cut(s)	762
SfoI	GGCGCC	1 cut(s)	1368
SfuI	TTCGAA	2 cut(s)	376, 451
SmiMI	CAYNNNNRTG	5 cut(s)	69, 93, 104, 948, 969
Sse9I	AATT	5 cut(s)	6, 721, 838, 900, 1108
SsiI	CCGC	4 cut(s)	252, 600, 800, 1327
SspDI	GGCGCC	1 cut(s)	1366
SspI	AATATT	1 cut(s)	892
SspMI	CTAG	3 cut(s)	416, 456, 1221
StyD4I	CCNGG	2 cut(s)	109, 547
StyI	CCWWGG	2 cut(s)	230, 949
TaaI	ACNGT	2 cut(s)	326, 695
TaiI	ACGT	2 cut(s)	1076, 1230
TaqI	TCGA	7 cut(s)	47, 192, 210, 376, 451, 969, 998
TasI	AATT	5 cut(s)	6, 721, 838, 900, 1108
TatI	WGTACW	3 cut(s)	637, 1165, 1377
TauI	GCSGC	2 cut(s)	254, 602
TfiI	GAWTC	2 cut(s)	373, 1342
Tru1I	TTAA	5 cut(s)	606, 690, 726, 813, 1233
Tru9I	TTAA	5 cut(s)	606, 690, 726, 813, 1233
TseFI	GTSAC	4 cut(s)	328, 747, 847, 918
TseI	GCWGC	6 cut(s)	11, 571, 679, 797, 1009, 1012
Tsp45I	GTSAC	4 cut(s)	328, 747, 847, 918
TspDTI	ATGAA	4 cut(s)	482, 507, 764, 893
TspGWI	ACGGA	3 cut(s)	836, 863, 1314
XapI	RAATTY	1 cut(s)	838
XceI	RCATGY	1 cut(s)	1166
XmiI	GTMKAC	1 cut(s)	998
XmnI	GAANNNNTTC	1 cut(s)	771
XspI	CTAG	3 cut(s)	416, 456, 1221
ZrmI	AGTACT	1 cut(s)	639
Zsp2I	ATGCAT	1 cut(s)	622

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.