Rh7AG462900

Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
63745344 .. 63754194
8851 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG462900.1

Sequence Viewer

Length: 1185 bp
ATGCAAAACCCAGAAGCTATTTCGTACCTGACGCAGAGCCAAGCTGCTGAGATCGATGAGATTCTCATGGGTCCTCTGGGATTCAGTGTGGACCAGTTAATGGAATTGGCTGGTTTGAGCGTGGCCACTTCAATAGCAGAGGTTTATAAACCGAGCGAGTATAATCGTGTCCTCGCGATTTGTGGCCCTGGAAACAATGGTGGTGATGGTCTTGTGGCTGCTCGTCACCTGCATCACTTTGGGTATAAGCCGTTTGTTTGTTATCCAAAGCGTACTGCTAAGCCTCTTTATACTGGTCTGGTCACTCAACTGGAATCACTGTCAGTCCCTTTCATATCTGTGGAAGATCTGCCTTTGGACTTGTCAAAGGACTTTGACATTGTTGTAGATGCAATGTTTGGGTTTTCATTCCGTGGTGATCCAAGGCCCCCTTTTGATAATCTAATCCAAAAGCTGAATTATATCAATAATTATGATCAAACACACCAAAAGTCCTCTGCTGTTGTCTCCATAGATATCCCATCTGGGTGGCAGGTTGAAGGAGATGGTGGTCCAGAAGGCATTAAGCCTGATATGTTGGTTTCTCTGACTGCTCCAAAGTTGTGTGCGAAGAACTTTTGTGGTCCACACCATTTTCTGGGTGGTAGATTTGTCCCACCATCTATTGCTGATAAATATAAGCTTCGTCTTCCCCCATACCCAGGCACTTCTATGTGTGTACGAATCGGAAAGCCTCCTCAAGTTGAAATATCTGCTCTAAGAGAGAACTATATTTCTCCTGAGTTTCTTGAGGAACAGGTTGAGGCTGACCCCTTTGATCAGTTCCGGAAATGGTTTGACGATGTAGTGGCTGCTGGCTTAAGGGAACCAAATGCAATGGCCTTATCAACTGCTTGCAAGAATGGAAAACCCTCATCGCGAATGGTATTGCTGAAAGGATTTGATAAGAACGGTTTTGTCTGGTATACCAATTATGAAAGTCGAAAGGCACAAGAGTTGTTTGAAAATCCTCATGCATCTCTTCTTTTCTACTGGGATGGTCTGAATCGGCAGGTGAGAGTGGAAGGATCTGTGCAGAAGGTTTCTGATGAGGAATCTGACCAGTACTTTCATAGCCGTCCTCGAGGAAGTCAGATTGGAGCAATAGTTAGCAAGCAGGTTTGTTTGTTGTTGCATAAATTTTGA

Protein Analysis

394

Amino Acids

43.89

Weight (kDa)

5.77

Isoelectric Point (pI)

31.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YjeF_N PF03853 31 - 202 2.9e-35 YjeF-related protein N-terminus
PNPOx_N PF01243 280 - 385 6.2e-26 Pyridoxamine 5'-phosphate oxidase
Pyridox_oxase_2 PF12766 281 - 359 1.1e-06 Pyridoxamine 5'-phosphate oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 147
AarI CACCTGC 2 cut(s) 237, 1042
AbsI CCTCGAGG 1 cut(s) 1122
Acc36I ACCTGC 4 cut(s) 237, 523, 1042, 1147
AccB7I CCANNNNNTGG 2 cut(s) 100, 637
AccI GTMKAC 1 cut(s) 965
AccII CGCG 2 cut(s) 176, 919
AccIII TCCGGA 1 cut(s) 825
AclWI GGATC 2 cut(s) 413, 1075
AcoI YGGCCR 1 cut(s) 123
AcsI RAATTY 1 cut(s) 1178
AfaI GTAC 4 cut(s) 26, 274, 720, 1106
AfiI CCNNNNNNNGG 3 cut(s) 100, 637, 701
AflII CTTAAG 1 cut(s) 859
AgsI TTSAA 4 cut(s) 132, 539, 746, 1004
AjnI CCWGG 2 cut(s) 187, 700
AluBI AGCT 4 cut(s) 17, 44, 454, 682
AluI AGCT 4 cut(s) 17, 44, 454, 682
Alw26I GTCTC 1 cut(s) 511
AlwI GGATC 2 cut(s) 413, 1075
Ama87I CYCGRG 1 cut(s) 1122
Aor13HI TCCGGA 1 cut(s) 825
AoxI GGCC 4 cut(s) 123, 184, 425, 879
ApeKI GCWGC 3 cut(s) 44, 218, 851
ApoI RAATTY 1 cut(s) 1178
AspS9I GGNCC 6 cut(s) 71, 91, 185, 426, 551, 623
AsuHPI GGTGA 4 cut(s) 215, 218, 428, 1066
AvaI CYCGRG 1 cut(s) 1122
AvaII GGWCC 4 cut(s) 71, 91, 551, 623
BalI TGGCCA 1 cut(s) 125
BbsI GAAGAC 1 cut(s) 680
BbvI GCAGC 3 cut(s) 31, 205, 838
BccI CCATC 5 cut(s) 200, 529, 539, 667, 1031
BceAI ACGGC 2 cut(s) 235, 1101
BciT130I CCWGG 2 cut(s) 189, 702
BclI TGATCA 2 cut(s) 475, 817
BcoDI GTCTC 1 cut(s) 511
BfrI CTTAAG 1 cut(s) 859
BfuAI ACCTGC 4 cut(s) 237, 523, 1042, 1147
BglII AGATCT 1 cut(s) 346
BisI GCNGC 3 cut(s) 45, 219, 852
BlpI GCTNAGC 1 cut(s) 279
BlsI GCNGC 3 cut(s) 46, 220, 853
BmcAI AGTACT 1 cut(s) 1106
Bme1390I CCNGG 2 cut(s) 189, 702
Bme18I GGWCC 4 cut(s) 71, 91, 551, 623
BmeT110I CYCGRG 1 cut(s) 1122
BmgT120I GGNCC 6 cut(s) 71, 91, 185, 426, 551, 623
BmiI GGNNCC 3 cut(s) 72, 428, 867
BmrFI CCNGG 2 cut(s) 189, 702
BmrI ACTGGG 1 cut(s) 1042
BmsI GCATC 3 cut(s) 241, 379, 1025
BmuI ACTGGG 1 cut(s) 1042
BpiI GAAGAC 1 cut(s) 680
Bpu1102I GCTNAGC 1 cut(s) 279
BpuEI CTTGAG 2 cut(s) 723, 809
Bsa29I ATCGAT 1 cut(s) 54
BsaJI CCNNGG 4 cut(s) 187, 412, 422, 700
BsaWI WCCGGW 1 cut(s) 825
BsaXI ACNNNNNCTCC 2 cut(s) 1131, 1161
Bsc4I CCNNNNNNNGG 3 cut(s) 100, 637, 701
Bse1I ACTGG 5 cut(s) 94, 298, 315, 1037, 1102
Bse3DI GCAATG 2 cut(s) 399, 882
BseAI TCCGGA 1 cut(s) 825
BseBI CCWGG 2 cut(s) 189, 702
BseCI ATCGAT 1 cut(s) 54
BseDI CCNNGG 4 cut(s) 187, 412, 422, 700
BseGI GGATG 1 cut(s) 1042
BseLI CCNNNNNNNGG 3 cut(s) 100, 637, 701
BseMI GCAATG 2 cut(s) 399, 882
BseMII CTCAG 2 cut(s) 39, 771
BseNI ACTGG 5 cut(s) 94, 298, 315, 1037, 1102
BseRI GAGGAG 1 cut(s) 726
BseXI GCAGC 3 cut(s) 31, 205, 838
BsgI GTGCAG 1 cut(s) 1094
Bsh1236I CGCG 2 cut(s) 176, 919
BshFI GGCC 4 cut(s) 125, 186, 427, 881
BshVI ATCGAT 1 cut(s) 54
BsiHKCI CYCGRG 1 cut(s) 1122
BsiSI CCGG 1 cut(s) 826
BslFI GGGAC 2 cut(s) 311, 638
BslI CCNNNNNNNGG 3 cut(s) 100, 637, 701
BsmAI GTCTC 1 cut(s) 511
BsmFI GGGAC 2 cut(s) 311, 638
BsnI GGCC 4 cut(s) 125, 186, 427, 881
BsoBI CYCGRG 1 cut(s) 1122
Bsp13I TCCGGA 1 cut(s) 825
Bsp143I GATC 6 cut(s) 51, 346, 418, 475, 817, 1067
Bsp1720I GCTNAGC 1 cut(s) 279
Bsp68I TCGCGA 2 cut(s) 176, 919
BspANI GGCC 4 cut(s) 125, 186, 427, 881
BspCNI CTCAG 2 cut(s) 40, 772
BspDI ATCGAT 1 cut(s) 54
BspEI TCCGGA 1 cut(s) 825
BspFNI CGCG 2 cut(s) 176, 919
BspLI GGNNCC 3 cut(s) 72, 428, 867
BspMI ACCTGC 4 cut(s) 237, 523, 1042, 1147
BspPI GGATC 2 cut(s) 413, 1075
BspTI CTTAAG 1 cut(s) 859
BsrDI GCAATG 2 cut(s) 399, 882
BsrI ACTGG 5 cut(s) 94, 298, 315, 1037, 1102
BssECI CCNNGG 4 cut(s) 187, 412, 422, 700
BssMI GATC 6 cut(s) 51, 346, 418, 475, 817, 1067
BssNAI GTATAC 1 cut(s) 966
BssT1I CCWWGG 1 cut(s) 422
Bst1107I GTATAC 1 cut(s) 966
Bst2UI CCWGG 2 cut(s) 189, 702
Bst4CI ACNGT 2 cut(s) 321, 953
Bst6I CTCTTC 1 cut(s) 1026
BstAFI CTTAAG 1 cut(s) 859
BstC8I GCNNGC 3 cut(s) 856, 895, 1154
BstDEI CTNAG 4 cut(s) 48, 279, 758, 780
BstDSI CCRYGG 1 cut(s) 412
BstF5I GGATG 1 cut(s) 1042
BstFNI CGCG 2 cut(s) 176, 919
BstKTI GATC 6 cut(s) 54, 349, 421, 478, 820, 1070
BstMAI GTCTC 1 cut(s) 511
BstMBI GATC 6 cut(s) 51, 346, 418, 475, 817, 1067
BstNI CCWGG 2 cut(s) 189, 702
BstSCI CCNGG 2 cut(s) 187, 700
BstUI CGCG 2 cut(s) 176, 919
BstV1I GCAGC 3 cut(s) 31, 205, 838
BstV2I GAAGAC 1 cut(s) 680
BstX2I RGATCY 2 cut(s) 346, 1067
BstXI CCANNNNNNTGG 1 cut(s) 528
BstYI RGATCY 2 cut(s) 346, 1067
BstZ17I GTATAC 1 cut(s) 966
Bsu15I ATCGAT 1 cut(s) 54
BsuRI GGCC 4 cut(s) 125, 186, 427, 881
BsuTUI ATCGAT 1 cut(s) 54
BtgI CCRYGG 1 cut(s) 412
BtgZI GCGATG 1 cut(s) 900
BtsCI GGATG 1 cut(s) 1042
BtsIMutI CAGTG 2 cut(s) 91, 317
BtuMI TCGCGA 2 cut(s) 176, 919
BveI ACCTGC 4 cut(s) 237, 523, 1042, 1147
Cac8I GCNNGC 3 cut(s) 856, 895, 1154
Cfr13I GGNCC 6 cut(s) 71, 91, 185, 426, 551, 623
ClaI ATCGAT 1 cut(s) 54
CseI GACGC 1 cut(s) 40
Csp6I GTAC 4 cut(s) 25, 273, 719, 1105
CviAII CATG 2 cut(s) 67, 1013
CviQI GTAC 4 cut(s) 25, 273, 719, 1105
DdeI CTNAG 4 cut(s) 48, 279, 758, 780
DpnI GATC 6 cut(s) 53, 348, 420, 477, 819, 1069
DpnII GATC 6 cut(s) 51, 346, 418, 475, 817, 1067
EaeI YGGCCR 1 cut(s) 123
Eam1104I CTCTTC 1 cut(s) 1026
EarI CTCTTC 1 cut(s) 1026
Eco130I CCWWGG 1 cut(s) 422
Eco32I GATATC 1 cut(s) 517
Eco47I GGWCC 4 cut(s) 71, 91, 551, 623
Eco88I CYCGRG 1 cut(s) 1122
EcoO109I RGGNCCY 2 cut(s) 71, 426
EcoRII CCWGG 2 cut(s) 187, 700
EcoRV GATATC 1 cut(s) 517
EcoT14I CCWWGG 1 cut(s) 422
EcoT22I ATGCAT 1 cut(s) 1018
ErhI CCWWGG 1 cut(s) 422
FaeI CATG 2 cut(s) 70, 1016
FalI AAGNNNNNCTT 2 cut(s) 415, 447
FaqI GGGAC 2 cut(s) 311, 638
FatI CATG 2 cut(s) 66, 1012
FbaI TGATCA 2 cut(s) 475, 817
FblI GTMKAC 1 cut(s) 965
Fnu4HI GCNGC 3 cut(s) 45, 219, 852
FokI GGATG 1 cut(s) 1049
Fsp4HI GCNGC 3 cut(s) 45, 219, 852
GluI GCNGC 3 cut(s) 45, 219, 852
HaeIII GGCC 4 cut(s) 125, 186, 427, 881
HapII CCGG 1 cut(s) 826
HgaI GACGC 1 cut(s) 40
Hin1II CATG 2 cut(s) 70, 1016
HindIII AAGCTT 1 cut(s) 680
HinfI GANTC 6 cut(s) 61, 81, 314, 723, 1045, 1094
HpaII CCGG 1 cut(s) 826
HphI GGTGA 4 cut(s) 215, 218, 428, 1066
Hpy166II GTNNAC 4 cut(s) 91, 626, 719, 966
Hpy188I TCNGA 6 cut(s) 588, 728, 1044, 1087, 1099, 1134
Hpy188III TCNNGA 6 cut(s) 175, 554, 779, 788, 826, 918
Hpy8I GTNNAC 4 cut(s) 91, 626, 719, 966
HpyAV CCTTC 4 cut(s) 533, 551, 1058, 1072
HpyCH4III ACNGT 2 cut(s) 321, 953
HpyCH4V TGCA 8 cut(s) 4, 232, 392, 875, 897, 1016, 1075, 1174
HpyF3I CTNAG 4 cut(s) 48, 279, 758, 780
Hsp92II CATG 2 cut(s) 70, 1016
Kpn2I TCCGGA 1 cut(s) 825
Ksp22I TGATCA 2 cut(s) 475, 817
Kzo9I GATC 6 cut(s) 51, 346, 418, 475, 817, 1067
LmnI GCTCC 2 cut(s) 598, 1139
Lsp1109I GCAGC 3 cut(s) 31, 205, 838
LweI GCATC 3 cut(s) 241, 379, 1025
MaeIII GTNAC 2 cut(s) 224, 301
MalI GATC 6 cut(s) 53, 348, 420, 477, 819, 1069
MboI GATC 6 cut(s) 51, 346, 418, 475, 817, 1067
MboII GAAGA 4 cut(s) 356, 622, 680, 1013
MflI RGATCY 2 cut(s) 346, 1067
MlsI TGGCCA 1 cut(s) 125
MluCI AATT 5 cut(s) 104, 457, 469, 970, 1178
MluNI TGGCCA 1 cut(s) 125
Mox20I TGGCCA 1 cut(s) 125
Mph1103I ATGCAT 1 cut(s) 1018
MroI TCCGGA 1 cut(s) 825
MscI TGGCCA 1 cut(s) 125
MseI TTAA 3 cut(s) 98, 564, 860
MslI CAYNNNNRTG 3 cut(s) 338, 526, 710
Msp20I TGGCCA 1 cut(s) 125
MspCI CTTAAG 1 cut(s) 859
MspI CCGG 1 cut(s) 826
MspR9I CCNGG 2 cut(s) 189, 702
MvaI CCWGG 2 cut(s) 189, 702
MvnI CGCG 2 cut(s) 176, 919
NdeII GATC 6 cut(s) 51, 346, 418, 475, 817, 1067
NlaIII CATG 2 cut(s) 70, 1016
NlaIV GGNNCC 3 cut(s) 72, 428, 867
NmuCI GTSAC 2 cut(s) 224, 301
NruI TCGCGA 2 cut(s) 176, 919
NsiI ATGCAT 1 cut(s) 1018
PaeR7I CTCGAG 1 cut(s) 1122
PaqCI CACCTGC 2 cut(s) 237, 1042
PfeI GAWTC 6 cut(s) 61, 81, 314, 723, 1045, 1094
PflMI CCANNNNNTGG 2 cut(s) 100, 637
PkrI GCNGC 3 cut(s) 46, 220, 853
PpuMI RGGWCCY 1 cut(s) 71
PsiI TTATAA 1 cut(s) 147
Psp5II RGGWCCY 1 cut(s) 71
Psp6I CCWGG 2 cut(s) 187, 700
PspGI CCWGG 2 cut(s) 187, 700
PspN4I GGNNCC 3 cut(s) 72, 428, 867
PspPI GGNCC 6 cut(s) 71, 91, 185, 426, 551, 623
PspPPI RGGWCCY 1 cut(s) 71
PspXI VCTCGAGB 1 cut(s) 1122
PsuI RGATCY 2 cut(s) 346, 1067
RruI TCGCGA 2 cut(s) 176, 919
RsaI GTAC 4 cut(s) 26, 274, 720, 1106
RsaNI GTAC 4 cut(s) 25, 273, 719, 1105
RseI CAYNNNNRTG 3 cut(s) 338, 526, 710
SaqAI TTAA 3 cut(s) 98, 564, 860
SatI GCNGC 3 cut(s) 45, 219, 852
Sau3AI GATC 6 cut(s) 51, 346, 418, 475, 817, 1067
Sau96I GGNCC 6 cut(s) 71, 91, 185, 426, 551, 623
ScaI AGTACT 1 cut(s) 1106
ScrFI CCNGG 2 cut(s) 189, 702
SfaNI GCATC 3 cut(s) 241, 379, 1025
Sfr274I CTCGAG 1 cut(s) 1122
SinI GGWCC 4 cut(s) 71, 91, 551, 623
SlaI CTCGAG 1 cut(s) 1122
SmiMI CAYNNNNRTG 3 cut(s) 338, 526, 710
SmlI CTYRAG 4 cut(s) 738, 788, 859, 1122
SmoI CTYRAG 4 cut(s) 738, 788, 859, 1122
Sse9I AATT 5 cut(s) 104, 457, 469, 970, 1178
StyD4I CCNGG 2 cut(s) 187, 700
StyI CCWWGG 1 cut(s) 422
TaaI ACNGT 2 cut(s) 321, 953
TaqI TCGA 3 cut(s) 54, 982, 1123
TasI AATT 5 cut(s) 104, 457, 469, 970, 1178
TatI WGTACW 1 cut(s) 1104
TfiI GAWTC 6 cut(s) 61, 81, 314, 723, 1045, 1094
Tru1I TTAA 3 cut(s) 98, 564, 860
Tru9I TTAA 3 cut(s) 98, 564, 860
TscAI CASTG 2 cut(s) 91, 324
TseFI GTSAC 2 cut(s) 224, 301
TseI GCWGC 3 cut(s) 44, 218, 851
Tsp45I GTSAC 2 cut(s) 224, 301
TspDTI ATGAA 4 cut(s) 322, 396, 990, 1100
TspGWI ACGGA 1 cut(s) 401
TspRI CASTG 2 cut(s) 91, 324
Van91I CCANNNNNTGG 2 cut(s) 100, 637
Vha464I CTTAAG 1 cut(s) 859
VpaK11BI GGWCC 4 cut(s) 71, 91, 551, 623
XapI RAATTY 1 cut(s) 1178
XcmI CCANNNNNNNNNTGG 1 cut(s) 638
XhoI CTCGAG 1 cut(s) 1122
XmiI GTMKAC 1 cut(s) 965
ZrmI AGTACT 1 cut(s) 1106
Zsp2I ATGCAT 1 cut(s) 1018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.