eukaryotic translation initiation factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G36730 AT1G77840 |
| fragaria_vesca | FvH4_5g38780 |
| malus_domestica | MD00G1104000.v1.1 MD09G1259500.v1.1 MD15G1359300.v1.1 |
| prunus_persica | Prupe.1G506900_v2.0.a1 Prupe.3G151100_v2.0.a1 |
| pyrus_communis | pycom08g14860 pycom09g17420 pycom15g32170 |
| rosa_chinensis | RchiOBHm_Chr7g0240701 |
| rosa_laevigata | RLG00000000625 |
| rosa_multiflora | Rmu_sc0004799.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00219650 |
| rosa_rugosa | Rorug07G0338400 Rorug07G0338400 |
| rosa_samantha | Rh7AG493000 Rh7BG465000 Rh7CG511400 Rh7DG478200 |
| rosa_wichuraiana | Rw7G041700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 223 |
| Acc36I | ACCTGC | 1 cut(s) | 160 |
| AccB1I | GGYRCC | 1 cut(s) | 566 |
| AccI | GTMKAC | 1 cut(s) | 161 |
| AciI | CCGC | 1 cut(s) | 551 |
| AcoI | YGGCCR | 1 cut(s) | 144 |
| AcuI | CTGAAG | 2 cut(s) | 801, 1074 |
| AfaI | GTAC | 4 cut(s) | 943, 955, 1046, 1169 |
| AfeI | AGCGCT | 1 cut(s) | 1291 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 48, 633, 1251 |
| AflII | CTTAAG | 2 cut(s) | 428, 539 |
| AgsI | TTSAA | 4 cut(s) | 901, 986, 998, 1159 |
| AjnI | CCWGG | 1 cut(s) | 639 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 592, 624 |
| Alw21I | GWGCWC | 1 cut(s) | 244 |
| Alw26I | GTCTC | 3 cut(s) | 317, 813, 1295 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 355 |
| Aor51HI | AGCGCT | 1 cut(s) | 1291 |
| AoxI | GGCC | 2 cut(s) | 138, 144 |
| ApeKI | GCWGC | 4 cut(s) | 371, 496, 662, 713 |
| AspLEI | GCGC | 1 cut(s) | 1292 |
| AspS9I | GGNCC | 2 cut(s) | 600, 655 |
| AsuC2I | CCSGG | 1 cut(s) | 320 |
| AsuHPI | GGTGA | 1 cut(s) | 1039 |
| AvaII | GGWCC | 2 cut(s) | 600, 655 |
| AxyI | CCTNAGG | 1 cut(s) | 476 |
| BalI | TGGCCA | 1 cut(s) | 146 |
| BanI | GGYRCC | 1 cut(s) | 566 |
| BanII | GRGCYC | 3 cut(s) | 196, 244, 1076 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1028, 1060 |
| BbsI | GAAGAC | 1 cut(s) | 221 |
| Bbv12I | GWGCWC | 1 cut(s) | 244 |
| BbvI | GCAGC | 4 cut(s) | 383, 508, 649, 725 |
| BccI | CCATC | 2 cut(s) | 641, 646 |
| BceAI | ACGGC | 1 cut(s) | 112 |
| BciT130I | CCWGG | 1 cut(s) | 641 |
| BcnI | CCSGG | 1 cut(s) | 320 |
| BcoDI | GTCTC | 3 cut(s) | 317, 813, 1295 |
| BfaI | CTAG | 1 cut(s) | 633 |
| BfmI | CTRYAG | 2 cut(s) | 8, 46 |
| BfoI | RGCGCY | 1 cut(s) | 1293 |
| BfrI | CTTAAG | 2 cut(s) | 428, 539 |
| BfuAI | ACCTGC | 1 cut(s) | 160 |
| BisI | GCNGC | 5 cut(s) | 372, 497, 552, 663, 714 |
| BlpI | GCTNAGC | 1 cut(s) | 255 |
| BlsI | GCNGC | 5 cut(s) | 373, 498, 553, 664, 715 |
| Bme1390I | CCNGG | 2 cut(s) | 320, 641 |
| Bme18I | GGWCC | 2 cut(s) | 600, 655 |
| BmgT120I | GGNCC | 2 cut(s) | 600, 655 |
| BmiI | GGNNCC | 6 cut(s) | 193, 317, 568, 577, 638, 1283 |
| BmrFI | CCNGG | 2 cut(s) | 320, 641 |
| BmrI | ACTGGG | 1 cut(s) | 190 |
| BmsI | GCATC | 6 cut(s) | 28, 48, 108, 342, 964, 1120 |
| BmuI | ACTGGG | 1 cut(s) | 190 |
| BpiI | GAAGAC | 1 cut(s) | 221 |
| BpmI | CTGGAG | 3 cut(s) | 795, 1205, 1268 |
| Bpu10I | CCTNAGC | 1 cut(s) | 441 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 255 |
| BpuEI | CTTGAG | 2 cut(s) | 293, 485 |
| BpuMI | CCSGG | 1 cut(s) | 320 |
| BsaBI | GATNNNNATC | 2 cut(s) | 335, 618 |
| BsaJI | CCNNGG | 6 cut(s) | 62, 141, 640, 865, 1020, 1068 |
| BsaWI | WCCGGW | 1 cut(s) | 605 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 48, 633, 1251 |
| Bse1I | ACTGG | 4 cut(s) | 196, 223, 685, 918 |
| Bse21I | CCTNAGG | 1 cut(s) | 476 |
| Bse8I | GATNNNNATC | 2 cut(s) | 335, 618 |
| BseBI | CCWGG | 1 cut(s) | 641 |
| BseDI | CCNNGG | 6 cut(s) | 62, 141, 640, 865, 1020, 1068 |
| BseGI | GGATG | 4 cut(s) | 72, 657, 701, 979 |
| BseJI | GATNNNNATC | 2 cut(s) | 335, 618 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 48, 633, 1251 |
| BseMII | CTCAG | 5 cut(s) | 318, 432, 467, 1091, 1284 |
| BseNI | ACTGG | 4 cut(s) | 196, 223, 685, 918 |
| BseRI | GAGGAG | 4 cut(s) | 493, 539, 746, 1202 |
| BseXI | GCAGC | 4 cut(s) | 383, 508, 649, 725 |
| BsgI | GTGCAG | 2 cut(s) | 317, 390 |
| BshFI | GGCC | 2 cut(s) | 140, 146 |
| BshNI | GGYRCC | 1 cut(s) | 566 |
| BsiHKAI | GWGCWC | 1 cut(s) | 244 |
| BsiSI | CCGG | 3 cut(s) | 320, 573, 606 |
| BslFI | GGGAC | 3 cut(s) | 211, 419, 781 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 48, 633, 1251 |
| BsmAI | GTCTC | 3 cut(s) | 317, 813, 1295 |
| BsmFI | GGGAC | 3 cut(s) | 211, 419, 781 |
| BsnI | GGCC | 2 cut(s) | 140, 146 |
| Bsp1286I | GDGCHC | 3 cut(s) | 196, 244, 1076 |
| Bsp143I | GATC | 3 cut(s) | 619, 885, 1038 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 255 |
| Bsp19I | CCATGG | 1 cut(s) | 865 |
| BspACI | CCGC | 1 cut(s) | 551 |
| BspANI | GGCC | 2 cut(s) | 140, 146 |
| BspCNI | CTCAG | 5 cut(s) | 319, 433, 468, 1090, 1285 |
| BspHI | TCATGA | 2 cut(s) | 244, 1200 |
| BspLI | GGNNCC | 6 cut(s) | 193, 317, 568, 577, 638, 1283 |
| BspMI | ACCTGC | 1 cut(s) | 160 |
| BspT107I | GGYRCC | 1 cut(s) | 566 |
| BspTI | CTTAAG | 2 cut(s) | 428, 539 |
| BsrI | ACTGG | 4 cut(s) | 196, 223, 685, 918 |
| BssECI | CCNNGG | 6 cut(s) | 62, 141, 640, 865, 1020, 1068 |
| BssMI | GATC | 3 cut(s) | 619, 885, 1038 |
| BssNAI | GTATAC | 1 cut(s) | 162 |
| BssT1I | CCWWGG | 4 cut(s) | 62, 141, 865, 1020 |
| Bst1107I | GTATAC | 1 cut(s) | 162 |
| Bst2UI | CCWGG | 1 cut(s) | 641 |
| Bst4CI | ACNGT | 1 cut(s) | 32 |
| Bst6I | CTCTTC | 3 cut(s) | 590, 777, 1302 |
| BstAFI | CTTAAG | 2 cut(s) | 428, 539 |
| BstC8I | GCNNGC | 1 cut(s) | 261 |
| BstDEI | CTNAG | 7 cut(s) | 255, 327, 342, 441, 476, 1077, 1293 |
| BstDSI | CCRYGG | 1 cut(s) | 865 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 46 |
| BstF5I | GGATG | 4 cut(s) | 72, 657, 701, 979 |
| BstH2I | RGCGCY | 1 cut(s) | 1293 |
| BstHHI | GCGC | 1 cut(s) | 1292 |
| BstKTI | GATC | 3 cut(s) | 622, 888, 1041 |
| BstMAI | GTCTC | 3 cut(s) | 317, 813, 1295 |
| BstMBI | GATC | 3 cut(s) | 619, 885, 1038 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 152, 260, 573, 752, 1064 |
| BstNI | CCWGG | 1 cut(s) | 641 |
| BstSCI | CCNGG | 2 cut(s) | 318, 639 |
| BstSFI | CTRYAG | 2 cut(s) | 8, 46 |
| BstV1I | GCAGC | 4 cut(s) | 383, 508, 649, 725 |
| BstV2I | GAAGAC | 1 cut(s) | 221 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 236, 647 |
| BstZ17I | GTATAC | 1 cut(s) | 162 |
| Bsu36I | CCTNAGG | 1 cut(s) | 476 |
| BsuRI | GGCC | 2 cut(s) | 140, 146 |
| BtgI | CCRYGG | 1 cut(s) | 865 |
| BtsCI | GGATG | 4 cut(s) | 72, 657, 701, 979 |
| BtsI | GCAGTG | 3 cut(s) | 249, 305, 919 |
| BtsIMutI | CAGTG | 5 cut(s) | 249, 305, 692, 777, 919 |
| BveI | ACCTGC | 1 cut(s) | 160 |
| Cac8I | GCNNGC | 1 cut(s) | 261 |
| CaiI | CAGNNNCTG | 1 cut(s) | 355 |
| CciI | TCATGA | 2 cut(s) | 244, 1200 |
| CfoI | GCGC | 1 cut(s) | 1292 |
| Cfr13I | GGNCC | 2 cut(s) | 600, 655 |
| Csp6I | GTAC | 4 cut(s) | 942, 954, 1045, 1168 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1125, 1160 |
| CviAII | CATG | 6 cut(s) | 230, 245, 400, 766, 866, 1201 |
| CviQI | GTAC | 4 cut(s) | 942, 954, 1045, 1168 |
| DdeI | CTNAG | 7 cut(s) | 255, 327, 342, 441, 476, 1077, 1293 |
| DpnI | GATC | 3 cut(s) | 621, 887, 1040 |
| DpnII | GATC | 3 cut(s) | 619, 885, 1038 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 223 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 223 |
| EaeI | YGGCCR | 1 cut(s) | 144 |
| Eam1104I | CTCTTC | 3 cut(s) | 590, 777, 1302 |
| EarI | CTCTTC | 3 cut(s) | 590, 777, 1302 |
| Ecl136II | GAGCTC | 1 cut(s) | 242 |
| Eco130I | CCWWGG | 4 cut(s) | 62, 141, 865, 1020 |
| Eco147I | AGGCCT | 1 cut(s) | 140 |
| Eco24I | GRGCYC | 3 cut(s) | 196, 244, 1076 |
| Eco47I | GGWCC | 2 cut(s) | 600, 655 |
| Eco47III | AGCGCT | 1 cut(s) | 1291 |
| Eco53kI | GAGCTC | 1 cut(s) | 242 |
| Eco57I | CTGAAG | 2 cut(s) | 801, 1074 |
| Eco81I | CCTNAGG | 1 cut(s) | 476 |
| EcoICRI | GAGCTC | 1 cut(s) | 242 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 46 |
| EcoO109I | RGGNCCY | 1 cut(s) | 600 |
| EcoRII | CCWGG | 1 cut(s) | 639 |
| EcoT14I | CCWWGG | 4 cut(s) | 62, 141, 865, 1020 |
| EcoT38I | GRGCYC | 3 cut(s) | 196, 244, 1076 |
| ErhI | CCWWGG | 4 cut(s) | 62, 141, 865, 1020 |
| FaeI | CATG | 6 cut(s) | 233, 248, 403, 769, 869, 1204 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 881, 913 |
| FaqI | GGGAC | 3 cut(s) | 211, 419, 781 |
| FatI | CATG | 6 cut(s) | 229, 244, 399, 765, 865, 1200 |
| FblI | GTMKAC | 1 cut(s) | 161 |
| Fnu4HI | GCNGC | 5 cut(s) | 372, 497, 552, 663, 714 |
| FokI | GGATG | 4 cut(s) | 79, 664, 688, 986 |
| FriOI | GRGCYC | 3 cut(s) | 196, 244, 1076 |
| Fsp4HI | GCNGC | 5 cut(s) | 372, 497, 552, 663, 714 |
| FspBI | CTAG | 1 cut(s) | 633 |
| GlaI | GCGC | 1 cut(s) | 1291 |
| GluI | GCNGC | 5 cut(s) | 372, 497, 552, 663, 714 |
| GsuI | CTGGAG | 3 cut(s) | 795, 1205, 1268 |
| HaeII | RGCGCY | 1 cut(s) | 1293 |
| HaeIII | GGCC | 2 cut(s) | 140, 146 |
| HapII | CCGG | 3 cut(s) | 320, 573, 606 |
| HhaI | GCGC | 1 cut(s) | 1292 |
| Hin1II | CATG | 6 cut(s) | 233, 248, 403, 769, 869, 1204 |
| Hin6I | GCGC | 1 cut(s) | 1290 |
| HinP1I | GCGC | 1 cut(s) | 1290 |
| HincII | GTYRAC | 1 cut(s) | 397 |
| HindII | GTYRAC | 1 cut(s) | 397 |
| HindIII | AAGCTT | 3 cut(s) | 257, 410, 872 |
| HinfI | GANTC | 5 cut(s) | 358, 433, 726, 1103, 1295 |
| HpaII | CCGG | 3 cut(s) | 320, 573, 606 |
| HphI | GGTGA | 1 cut(s) | 1039 |
| Hpy166II | GTNNAC | 3 cut(s) | 162, 397, 1030 |
| Hpy188I | TCNGA | 4 cut(s) | 391, 613, 1054, 1300 |
| Hpy188III | TCNNGA | 8 cut(s) | 103, 245, 272, 440, 812, 1201, 1214, 1285 |
| Hpy8I | GTNNAC | 3 cut(s) | 162, 397, 1030 |
| HpyAV | CCTTC | 9 cut(s) | 52, 77, 130, 500, 538, 895, 992, 1117, 1211 |
| HpyCH4III | ACNGT | 1 cut(s) | 32 |
| HpyCH4IV | ACGT | 2 cut(s) | 111, 224 |
| HpyCH4V | TGCA | 2 cut(s) | 298, 371 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 152, 260, 573, 752, 1064 |
| HpyF3I | CTNAG | 7 cut(s) | 255, 327, 342, 441, 476, 1077, 1293 |
| HpySE526I | ACGT | 2 cut(s) | 111, 224 |
| Hsp92II | CATG | 6 cut(s) | 233, 248, 403, 769, 869, 1204 |
| HspAI | GCGC | 1 cut(s) | 1290 |
| Kzo9I | GATC | 3 cut(s) | 619, 885, 1038 |
| LmnI | GCTCC | 9 cut(s) | 191, 239, 526, 581, 636, 733, 909, 1247, 1287 |
| Lsp1109I | GCAGC | 4 cut(s) | 383, 508, 649, 725 |
| LweI | GCATC | 6 cut(s) | 28, 48, 108, 342, 964, 1120 |
| MaeI | CTAG | 1 cut(s) | 633 |
| MaeII | ACGT | 2 cut(s) | 111, 224 |
| MaeIII | GTNAC | 2 cut(s) | 32, 748 |
| MalI | GATC | 3 cut(s) | 621, 887, 1040 |
| MboI | GATC | 3 cut(s) | 619, 885, 1038 |
| MboII | GAAGA | 9 cut(s) | 226, 460, 607, 629, 794, 799, 1048, 1187, 1267 |
| MhlI | GDGCHC | 3 cut(s) | 196, 244, 1076 |
| MlsI | TGGCCA | 1 cut(s) | 146 |
| MluCI | AATT | 2 cut(s) | 129, 513 |
| MluNI | TGGCCA | 1 cut(s) | 146 |
| MlyI | GAGTC | 2 cut(s) | 1112, 1304 |
| MmeI | TCCRAC | 2 cut(s) | 51, 985 |
| Mox20I | TGGCCA | 1 cut(s) | 146 |
| MscI | TGGCCA | 1 cut(s) | 146 |
| MseI | TTAA | 9 cut(s) | 117, 234, 285, 363, 429, 540, 771, 1223, 1263 |
| MslI | CAYNNNNRTG | 1 cut(s) | 234 |
| Msp20I | TGGCCA | 1 cut(s) | 146 |
| MspA1I | CMGCKG | 1 cut(s) | 1081 |
| MspCI | CTTAAG | 2 cut(s) | 428, 539 |
| MspI | CCGG | 3 cut(s) | 320, 573, 606 |
| MspR9I | CCNGG | 2 cut(s) | 320, 641 |
| MvaI | CCWGG | 1 cut(s) | 641 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 152, 260, 573, 752, 1064 |
| NciI | CCSGG | 1 cut(s) | 320 |
| NcoI | CCATGG | 1 cut(s) | 865 |
| NdeII | GATC | 3 cut(s) | 619, 885, 1038 |
| NlaIII | CATG | 6 cut(s) | 233, 248, 403, 769, 869, 1204 |
| NlaIV | GGNNCC | 6 cut(s) | 193, 317, 568, 577, 638, 1283 |
| NmeAIII | GCCGAG | 1 cut(s) | 1093 |
| NmuCI | GTSAC | 1 cut(s) | 32 |
| PagI | TCATGA | 2 cut(s) | 244, 1200 |
| PceI | AGGCCT | 1 cut(s) | 140 |
| PfeI | GAWTC | 3 cut(s) | 358, 433, 726 |
| PkrI | GCNGC | 5 cut(s) | 373, 498, 553, 664, 715 |
| PleI | GAGTC | 2 cut(s) | 1111, 1303 |
| PpsI | GAGTC | 2 cut(s) | 1111, 1303 |
| PpuMI | RGGWCCY | 1 cut(s) | 600 |
| Psp124BI | GAGCTC | 1 cut(s) | 244 |
| Psp5II | RGGWCCY | 1 cut(s) | 600 |
| Psp6I | CCWGG | 1 cut(s) | 639 |
| PspGI | CCWGG | 1 cut(s) | 639 |
| PspN4I | GGNNCC | 6 cut(s) | 193, 317, 568, 577, 638, 1283 |
| PspPI | GGNCC | 2 cut(s) | 600, 655 |
| PspPPI | RGGWCCY | 1 cut(s) | 600 |
| PstNI | CAGNNNCTG | 1 cut(s) | 355 |
| PvuII | CAGCTG | 1 cut(s) | 1081 |
| RsaI | GTAC | 4 cut(s) | 943, 955, 1046, 1169 |
| RsaNI | GTAC | 4 cut(s) | 942, 954, 1045, 1168 |
| RseI | CAYNNNNRTG | 1 cut(s) | 234 |
| SacI | GAGCTC | 1 cut(s) | 244 |
| SaqAI | TTAA | 9 cut(s) | 117, 234, 285, 363, 429, 540, 771, 1223, 1263 |
| SatI | GCNGC | 5 cut(s) | 372, 497, 552, 663, 714 |
| Sau3AI | GATC | 3 cut(s) | 619, 885, 1038 |
| Sau96I | GGNCC | 2 cut(s) | 600, 655 |
| SchI | GAGTC | 2 cut(s) | 1112, 1304 |
| ScrFI | CCNGG | 2 cut(s) | 320, 641 |
| SduI | GDGCHC | 3 cut(s) | 196, 244, 1076 |
| SfaNI | GCATC | 6 cut(s) | 28, 48, 108, 342, 964, 1120 |
| SfcI | CTRYAG | 2 cut(s) | 8, 46 |
| SinI | GGWCC | 2 cut(s) | 600, 655 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 234 |
| SmlI | CTYRAG | 4 cut(s) | 272, 428, 500, 539 |
| SmoI | CTYRAG | 4 cut(s) | 272, 428, 500, 539 |
| Sse9I | AATT | 2 cut(s) | 129, 513 |
| SseBI | AGGCCT | 1 cut(s) | 140 |
| SsiI | CCGC | 1 cut(s) | 551 |
| SspMI | CTAG | 1 cut(s) | 633 |
| SstI | GAGCTC | 1 cut(s) | 244 |
| StuI | AGGCCT | 1 cut(s) | 140 |
| StyD4I | CCNGG | 2 cut(s) | 318, 639 |
| StyI | CCWWGG | 4 cut(s) | 62, 141, 865, 1020 |
| TaaI | ACNGT | 1 cut(s) | 32 |
| TaiI | ACGT | 2 cut(s) | 114, 227 |
| TaqI | TCGA | 1 cut(s) | 729 |
| TasI | AATT | 2 cut(s) | 129, 513 |
| TatI | WGTACW | 1 cut(s) | 1044 |
| TauI | GCSGC | 1 cut(s) | 554 |
| TfiI | GAWTC | 3 cut(s) | 358, 433, 726 |
| Tru1I | TTAA | 9 cut(s) | 117, 234, 285, 363, 429, 540, 771, 1223, 1263 |
| Tru9I | TTAA | 9 cut(s) | 117, 234, 285, 363, 429, 540, 771, 1223, 1263 |
| TscAI | CASTG | 5 cut(s) | 256, 305, 692, 784, 919 |
| TseFI | GTSAC | 1 cut(s) | 32 |
| TseI | GCWGC | 4 cut(s) | 371, 496, 662, 713 |
| Tsp45I | GTSAC | 1 cut(s) | 32 |
| TspDTI | ATGAA | 5 cut(s) | 271, 630, 1188, 1217, 1261 |
| TspRI | CASTG | 5 cut(s) | 256, 305, 692, 784, 919 |
| Vha464I | CTTAAG | 2 cut(s) | 428, 539 |
| VpaK11BI | GGWCC | 2 cut(s) | 600, 655 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 46 |
| XmiI | GTMKAC | 1 cut(s) | 161 |
| XspI | CTAG | 1 cut(s) | 633 |