FvH4_6g00970

Catalyzes the ferrous insertion into protoporphyrin IX

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
536814 .. 542045
5232 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g00970.t3

Sequence Viewer

Length: 1503 bp
ATGGCGGCAGAATCCATAGCAATGCTACCCTACACCATCTCCTCCATCCCCTCAGACCACCACAGGCTCCTGCCACGTGTCCTCTCCGTCTCCTCCTCCCACTGCGTCGCTCTCTCCAGAAACTGCTCCTCCTCCTCGTCGGCGGCGGCGCAATCCTCGCCGCTTTTATCGCTCCGGAAGTGCTTGCCGCCGCTAAAAGCGCTTGTGACCGCCGATACTACTCGAACCGCCAATACGACGCCGCTTGGTGTTGACGATAGAGTCGGAGTGTTGTTGCTTAACCTCGGCGGACCGGAGACTCTCGACGACGTCCAGCCTTTCTTGTTTAACCTCTTCGCAGATCCGGATATCATTAGACTGCCGAGGCTGTTCCGGTTTCTTCAGAAGCCATTGGCGCAGTTTATATCGGTTCTGAGGGCACCAAAGAGCAAAGAAGGCTATGCCGCAATTGGCGGCGGCTCTCCTCTTCGGGAGATAACCGATAAACAGGCGGAAGAGTTGAGGAAGTCTCTTTGGGAGAAGGATGTCCCGGCCAAAGTGTATGTCGGTATGCGTTATTGGCATCCATTCACTGAAGAAGCTATAGAGCAGATAAAACGAGATGGAATTACGAAGCTTGTTGTCCTTCCGCTTTATCCACAATTTTCAATATCGACTAGTGGTTCAAGCCTTCGGCTGTTGGAGAGTATATTCCGGGAGGATGAGTATCTAGTCAACATGCAGCACACAGTAATACCATCGTGGTACCAGCGTGAAGGATACATAACTGCAATGGCAAATTTGATTGAAAAGGAGCTAAAACGTTTTGACTTCCCTGACAAGGTGATGTTATTCTTCAGTGCCCATGGAGTGCCACTTGCATATGTGGAAGAGGCTGGTGATCCGTACAAGGCAGAAATGGAGGAATGTGTGGATTTGATAATGGAAGAATTAGAAAAGAGAAATTTAACTAATGCATACACCCTTGCCTATCAGAGCAGAGTCGGACCTGTGGAATGGTTAAGACCTTATACAGATGACACAATAATTGAGCTTGGGCAAAAGGGAGTTAAAAGGCTGTTGGCGGTCCCTATAAGCTTTGTCAGTGAGCATATTGAAACTCTAGAAGAAATTGATGTGGAGTACAAAGAATTGGCTGTAAAATCTGGTATAGAGAGTTGGGGGCGTGTTCCTGCACTTGGATGTGAGCCCACCTTCATTTCAGATCTAGCAGACGCAGTGATTGAGAGTTTGCCATATGTTGGAGCTATGGCAGTCTCAAACCTTGAAGCTCGACAGTCTTTAGTTCCACTTGGGAGTGTAGAAGAGTTGTTAGCAGCATATGATTCACAGCGGAGGGAGCTACCACCGCCTGTGACAGTTTGGGAATGGGGTTGGACCAAAAGTGCCGAGACTTGGAATGGAAGAGCAGCTATGTTGGCAGTGGTTGTTTTACTGGTCCTAGAAGTCACCACTGGGGAGGGGTTTCTGCATCAATGGGGCATATTACCCTTACATCCCTGA

Protein Analysis

501

Amino Acids

55.77

Weight (kDa)

5.13

Isoelectric Point (pI)

48.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferrochelatase PF00762 88 - 325 5.5e-76 Ferrochelatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 260
AatII GACGTC 1 cut(s) 312
Acc65I GGTACC 1 cut(s) 744
AccB1I GGYRCC 2 cut(s) 418, 744
AccB7I CCANNNNNTGG 1 cut(s) 1241
AccIII TCCGGA 2 cut(s) 174, 343
AclI AACGTT 1 cut(s) 802
AclWI GGATC 2 cut(s) 335, 875
AcoI YGGCCR 1 cut(s) 531
AcsI RAATTY 2 cut(s) 778, 943
AcuI CTGAAG 3 cut(s) 365, 594, 820
AcvI CACGTG 1 cut(s) 77
AcyI GRCGYC 2 cut(s) 239, 309
AfaI GTAC 3 cut(s) 746, 887, 1124
AfeI AGCGCT 1 cut(s) 201
AfiI CCNNNNNNNGG 4 cut(s) 820, 1178, 1241, 1395
AflIII ACRYGT 1 cut(s) 76
AgsI TTSAA 5 cut(s) 648, 666, 788, 1097, 1268
AhlI ACTAGT 1 cut(s) 656
AluBI AGCT 9 cut(s) 581, 616, 796, 1033, 1077, 1247, 1271, 1342, 1412
AluI AGCT 9 cut(s) 581, 616, 796, 1033, 1077, 1247, 1271, 1342, 1412
Alw26I GTCTC 5 cut(s) 94, 290, 513, 1261, 1385
AlwI GGATC 2 cut(s) 335, 875
AlwNI CAGNNNCTG 1 cut(s) 123
Aor13HI TCCGGA 2 cut(s) 174, 343
Aor51HI AGCGCT 1 cut(s) 201
AoxI GGCC 1 cut(s) 531
ApeKI GCWGC 3 cut(s) 721, 1316, 1409
ApoI RAATTY 2 cut(s) 778, 943
ArsI GACNNNNNNTTYG 2 cut(s) 528, 560
Asp718I GGTACC 1 cut(s) 744
AspLEI GCGC 3 cut(s) 151, 202, 397
AspS9I GGNCC 5 cut(s) 290, 986, 1066, 1377, 1438
AsuC2I CCSGG 2 cut(s) 530, 695
AsuHPI GGTGA 3 cut(s) 835, 890, 1441
AvaII GGWCC 5 cut(s) 290, 986, 1066, 1377, 1438
BaeGI GKGCMC 2 cut(s) 421, 844
BaeI ACNNNNGTAYC 2 cut(s) 736, 769
BanI GGYRCC 2 cut(s) 418, 744
BanII GRGCYC 1 cut(s) 1191
BbrPI CACGTG 1 cut(s) 77
BbvI GCAGC 3 cut(s) 733, 1328, 1421
BccI CCATC 4 cut(s) 44, 53, 596, 745
BciVI GTATCC 1 cut(s) 752
BcnI CCSGG 2 cut(s) 530, 695
BcoDI GTCTC 5 cut(s) 94, 290, 513, 1261, 1385
BcuI ACTAGT 1 cut(s) 656
BfaI CTAG 5 cut(s) 657, 710, 1103, 1208, 1442
BfmI CTRYAG 1 cut(s) 582
BfoI RGCGCY 1 cut(s) 203
BfuI GTATCC 1 cut(s) 752
BglII AGATCT 1 cut(s) 1204
Bme1390I CCNGG 2 cut(s) 530, 695
Bme18I GGWCC 5 cut(s) 290, 986, 1066, 1377, 1438
BmgT120I GGNCC 5 cut(s) 290, 986, 1066, 1377, 1438
BmiI GGNNCC 4 cut(s) 68, 420, 746, 1068
BmrFI CCNGG 2 cut(s) 530, 695
BmrI ACTGGG 1 cut(s) 1464
BmsI GCATC 2 cut(s) 571, 1480
BmuI ACTGGG 1 cut(s) 1464
BplI GAGNNNNNCTC 2 cut(s) 493, 525
BpmI CTGGAG 1 cut(s) 100
BpuMI CCSGG 2 cut(s) 530, 695
BsaAI YACGTR 1 cut(s) 77
BsaBI GATNNNNATC 1 cut(s) 705
BsaHI GRCGYC 2 cut(s) 239, 309
BsaJI CCNNGG 3 cut(s) 283, 362, 844
BsaWI WCCGGW 4 cut(s) 174, 292, 343, 372
BsaXI ACNNNNNCTCC 6 cut(s) 23, 53, 113, 143, 689, 719
Bsc4I CCNNNNNNNGG 4 cut(s) 820, 1178, 1241, 1395
Bse1I ACTGG 2 cut(s) 1440, 1459
Bse3DI GCAATG 2 cut(s) 27, 777
Bse8I GATNNNNATC 1 cut(s) 705
BseAI TCCGGA 2 cut(s) 174, 343
BseDI CCNNGG 3 cut(s) 283, 362, 844
BseGI GGATG 6 cut(s) 45, 529, 562, 706, 1187, 1495
BseJI GATNNNNATC 1 cut(s) 705
BseLI CCNNNNNNNGG 4 cut(s) 820, 1178, 1241, 1395
BseMI GCAATG 2 cut(s) 27, 777
BseMII CTCAG 2 cut(s) 66, 404
BseNI ACTGG 2 cut(s) 1440, 1459
BseRI GAGGAG 7 cut(s) 31, 82, 85, 118, 121, 124, 453
BseSI GKGCMC 2 cut(s) 421, 844
BseXI GCAGC 3 cut(s) 733, 1328, 1421
BsgI GTGCAG 1 cut(s) 1158
BshFI GGCC 1 cut(s) 533
BshNI GGYRCC 2 cut(s) 418, 744
BsiSI CCGG 6 cut(s) 175, 293, 344, 373, 530, 694
BslFI GGGAC 2 cut(s) 512, 1052
BslI CCNNNNNNNGG 4 cut(s) 820, 1178, 1241, 1395
BsmAI GTCTC 5 cut(s) 94, 290, 513, 1261, 1385
BsmBI CGTCTC 1 cut(s) 94
BsmFI GGGAC 2 cut(s) 512, 1052
BsnI GGCC 1 cut(s) 533
Bsp1286I GDGCHC 3 cut(s) 421, 844, 1191
Bsp13I TCCGGA 2 cut(s) 174, 343
Bsp143I GATC 3 cut(s) 340, 880, 1204
Bsp19I CCATGG 1 cut(s) 844
BspANI GGCC 1 cut(s) 533
BspCNI CTCAG 2 cut(s) 65, 405
BspEI TCCGGA 2 cut(s) 174, 343
BspLI GGNNCC 4 cut(s) 68, 420, 746, 1068
BspPI GGATC 2 cut(s) 335, 875
BspQI GCTCTTC 1 cut(s) 1399
BspT107I GGYRCC 2 cut(s) 418, 744
BsrDI GCAATG 2 cut(s) 27, 777
BsrI ACTGG 2 cut(s) 1440, 1459
BssECI CCNNGG 3 cut(s) 283, 362, 844
BssMI GATC 3 cut(s) 340, 880, 1204
BssNI GRCGYC 2 cut(s) 239, 309
BssT1I CCWWGG 1 cut(s) 844
Bst4CI ACNGT 3 cut(s) 730, 1278, 1360
Bst6I CTCTTC 6 cut(s) 338, 471, 489, 864, 1299, 1399
BstACI GRCGYC 2 cut(s) 239, 309
BstBAI YACGTR 1 cut(s) 77
BstC8I GCNNGC 1 cut(s) 185
BstDEI CTNAG 2 cut(s) 52, 413
BstDSI CCRYGG 1 cut(s) 844
BstF5I GGATG 6 cut(s) 45, 529, 562, 706, 1187, 1495
BstH2I RGCGCY 1 cut(s) 203
BstHHI GCGC 3 cut(s) 151, 202, 397
BstKTI GATC 3 cut(s) 343, 883, 1207
BstMAI GTCTC 5 cut(s) 94, 290, 513, 1261, 1385
BstMBI GATC 3 cut(s) 340, 880, 1204
BstMWI GCNNNNNNNGC 9 cut(s) 157, 169, 199, 394, 435, 559, 1339, 1348, 1418
BstNSI RCATGY 1 cut(s) 721
BstSCI CCNGG 2 cut(s) 528, 693
BstSFI CTRYAG 1 cut(s) 582
BstSLI GKGCMC 2 cut(s) 421, 844
BstV1I GCAGC 3 cut(s) 733, 1328, 1421
BstX2I RGATCY 2 cut(s) 340, 1204
BstYI RGATCY 2 cut(s) 340, 1204
BsuI GTATCC 1 cut(s) 752
BsuRI GGCC 1 cut(s) 533
BtgI CCRYGG 1 cut(s) 844
BtsCI GGATG 6 cut(s) 45, 529, 562, 706, 1187, 1495
BtsI GCAGTG 3 cut(s) 100, 1224, 1428
BtsIMutI CAGTG 7 cut(s) 100, 570, 844, 1090, 1224, 1428, 1452
Cac8I GCNNGC 1 cut(s) 185
CaiI CAGNNNCTG 1 cut(s) 123
CfoI GCGC 3 cut(s) 151, 202, 397
Cfr13I GGNCC 5 cut(s) 290, 986, 1066, 1377, 1438
CpoI CGGWCCG 1 cut(s) 290
CseI GACGC 3 cut(s) 94, 247, 1223
Csp6I GTAC 3 cut(s) 745, 886, 1123
CspI CGGWCCG 1 cut(s) 290
CviAII CATG 2 cut(s) 718, 845
CviQI GTAC 3 cut(s) 745, 886, 1123
DdeI CTNAG 2 cut(s) 52, 413
DpnI GATC 3 cut(s) 342, 882, 1206
DpnII GATC 3 cut(s) 340, 880, 1204
DrdI GACNNNNNNGTC 1 cut(s) 260
DseDI GACNNNNNNGTC 1 cut(s) 260
EaeI YGGCCR 1 cut(s) 531
Eam1104I CTCTTC 6 cut(s) 338, 471, 489, 864, 1299, 1399
EarI CTCTTC 6 cut(s) 338, 471, 489, 864, 1299, 1399
EciI GGCGGA 2 cut(s) 303, 506
Eco130I CCWWGG 1 cut(s) 844
Eco24I GRGCYC 1 cut(s) 1191
Eco32I GATATC 1 cut(s) 349
Eco47I GGWCC 5 cut(s) 290, 986, 1066, 1377, 1438
Eco47III AGCGCT 1 cut(s) 201
Eco57I CTGAAG 3 cut(s) 365, 594, 820
Eco72I CACGTG 1 cut(s) 77
EcoRV GATATC 1 cut(s) 349
EcoT14I CCWWGG 1 cut(s) 844
EcoT22I ATGCAT 1 cut(s) 958
EcoT38I GRGCYC 1 cut(s) 1191
ErhI CCWWGG 1 cut(s) 844
Esp3I CGTCTC 1 cut(s) 94
FaeI CATG 2 cut(s) 721, 848
FaqI GGGAC 2 cut(s) 512, 1052
FatI CATG 2 cut(s) 717, 844
FauNDI CATATG 3 cut(s) 862, 1237, 1321
FokI GGATG 6 cut(s) 32, 536, 549, 713, 1194, 1482
FriOI GRGCYC 1 cut(s) 1191
FspBI CTAG 5 cut(s) 657, 710, 1103, 1208, 1442
GlaI GCGC 3 cut(s) 150, 201, 396
GsuI CTGGAG 1 cut(s) 100
HaeII RGCGCY 1 cut(s) 203
HaeIII GGCC 1 cut(s) 533
HapII CCGG 6 cut(s) 175, 293, 344, 373, 530, 694
HgaI GACGC 3 cut(s) 94, 247, 1223
HhaI GCGC 3 cut(s) 151, 202, 397
Hin1I GRCGYC 2 cut(s) 239, 309
Hin1II CATG 2 cut(s) 721, 848
Hin6I GCGC 3 cut(s) 149, 200, 395
HinP1I GCGC 3 cut(s) 149, 200, 395
HincII GTYRAC 2 cut(s) 253, 715
HindII GTYRAC 2 cut(s) 253, 715
HindIII AAGCTT 2 cut(s) 614, 1075
HinfI GANTC 5 cut(s) 11, 261, 298, 981, 1325
HpaII CCGG 6 cut(s) 175, 293, 344, 373, 530, 694
HphI GGTGA 3 cut(s) 835, 890, 1441
Hpy166II GTNNAC 2 cut(s) 253, 715
Hpy188I TCNGA 7 cut(s) 55, 266, 384, 414, 975, 986, 1204
Hpy188III TCNNGA 6 cut(s) 117, 175, 302, 344, 470, 1103
Hpy8I GTNNAC 2 cut(s) 253, 715
Hpy99I CGWCG 5 cut(s) 110, 142, 241, 308, 311
HpyAV CCTTC 6 cut(s) 428, 514, 635, 680, 749, 1204
HpyCH4III ACNGT 3 cut(s) 730, 1278, 1360
HpyCH4IV ACGT 3 cut(s) 76, 309, 802
HpyCH4V TGCA 6 cut(s) 721, 770, 860, 956, 1175, 1471
HpyF10VI GCNNNNNNNGC 9 cut(s) 157, 169, 199, 394, 435, 559, 1339, 1348, 1418
HpyF3I CTNAG 2 cut(s) 52, 413
HpySE526I ACGT 3 cut(s) 76, 309, 802
Hsp92I GRCGYC 2 cut(s) 239, 309
Hsp92II CATG 2 cut(s) 721, 848
HspAI GCGC 3 cut(s) 149, 200, 395
Kpn2I TCCGGA 2 cut(s) 174, 343
KpnI GGTACC 1 cut(s) 748
Kzo9I GATC 3 cut(s) 340, 880, 1204
LguI GCTCTTC 1 cut(s) 1399
LmnI GCTCC 6 cut(s) 72, 131, 177, 793, 1244, 1339
Lsp1109I GCAGC 3 cut(s) 733, 1328, 1421
LweI GCATC 2 cut(s) 571, 1480
MaeI CTAG 5 cut(s) 657, 710, 1103, 1208, 1442
MaeII ACGT 3 cut(s) 76, 309, 802
MaeIII GTNAC 3 cut(s) 205, 1354, 1447
MalI GATC 3 cut(s) 342, 882, 1206
MboI GATC 3 cut(s) 340, 880, 1204
MfeI CAATTG 1 cut(s) 447
MflI RGATCY 2 cut(s) 340, 1204
MhlI GDGCHC 3 cut(s) 421, 844, 1191
MluCI AATT 9 cut(s) 447, 606, 641, 778, 929, 943, 1026, 1110, 1130
MlyI GAGTC 3 cut(s) 270, 292, 990
MmeI TCCRAC 5 cut(s) 244, 660, 964, 1222, 1355
Mph1103I ATGCAT 1 cut(s) 958
MroI TCCGGA 2 cut(s) 174, 343
MseI TTAA 5 cut(s) 279, 327, 947, 1001, 1050
MslI CAYNNNNRTG 2 cut(s) 20, 1180
MspA1I CMGCKG 1 cut(s) 1333
MspI CCGG 6 cut(s) 175, 293, 344, 373, 530, 694
MspR9I CCNGG 2 cut(s) 530, 695
MunI CAATTG 1 cut(s) 447
MwoI GCNNNNNNNGC 9 cut(s) 157, 169, 199, 394, 435, 559, 1339, 1348, 1418
NciI CCSGG 2 cut(s) 530, 695
NcoI CCATGG 1 cut(s) 844
NdeI CATATG 3 cut(s) 862, 1237, 1321
NdeII GATC 3 cut(s) 340, 880, 1204
NlaIII CATG 2 cut(s) 721, 848
NlaIV GGNNCC 4 cut(s) 68, 420, 746, 1068
NmeAIII GCCGAG 3 cut(s) 264, 387, 1414
NmuCI GTSAC 3 cut(s) 205, 1354, 1447
NsiI ATGCAT 1 cut(s) 958
NspI RCATGY 1 cut(s) 721
PciSI GCTCTTC 1 cut(s) 1399
PfeI GAWTC 2 cut(s) 11, 1325
PflFI GACNNNGTC 1 cut(s) 308
PflMI CCANNNNNTGG 1 cut(s) 1241
PfoI TCCNGGA 1 cut(s) 693
PleI GAGTC 3 cut(s) 269, 292, 989
PmaCI CACGTG 1 cut(s) 77
PmlI CACGTG 1 cut(s) 77
PpsI GAGTC 3 cut(s) 269, 292, 989
Ppu21I YACGTR 1 cut(s) 77
Psp1406I AACGTT 1 cut(s) 802
PspCI CACGTG 1 cut(s) 77
PspN4I GGNNCC 4 cut(s) 68, 420, 746, 1068
PspPI GGNCC 5 cut(s) 290, 986, 1066, 1377, 1438
PsrI GAACNNNNNNTAC 2 cut(s) 217, 249
PstNI CAGNNNCTG 1 cut(s) 123
PsuI RGATCY 2 cut(s) 340, 1204
PsyI GACNNNGTC 1 cut(s) 308
RsaI GTAC 3 cut(s) 746, 887, 1124
RsaNI GTAC 3 cut(s) 745, 886, 1123
RseI CAYNNNNRTG 2 cut(s) 20, 1180
Rsr2I CGGWCCG 1 cut(s) 290
RsrII CGGWCCG 1 cut(s) 290
SapI GCTCTTC 1 cut(s) 1399
SaqAI TTAA 5 cut(s) 279, 327, 947, 1001, 1050
Sau3AI GATC 3 cut(s) 340, 880, 1204
Sau96I GGNCC 5 cut(s) 290, 986, 1066, 1377, 1438
SchI GAGTC 3 cut(s) 270, 292, 990
ScrFI CCNGG 2 cut(s) 530, 695
SduI GDGCHC 3 cut(s) 421, 844, 1191
SfaNI GCATC 2 cut(s) 571, 1480
SfcI CTRYAG 1 cut(s) 582
SinI GGWCC 5 cut(s) 290, 986, 1066, 1377, 1438
SmiMI CAYNNNNRTG 2 cut(s) 20, 1180
SpeI ACTAGT 1 cut(s) 656
Sse9I AATT 9 cut(s) 447, 606, 641, 778, 929, 943, 1026, 1110, 1130
SspMI CTAG 5 cut(s) 657, 710, 1103, 1208, 1442
StyD4I CCNGG 2 cut(s) 528, 693
StyI CCWWGG 1 cut(s) 844
TaaI ACNGT 3 cut(s) 730, 1278, 1360
TaiI ACGT 3 cut(s) 79, 312, 805
TaqI TCGA 4 cut(s) 223, 303, 653, 1273
TasI AATT 9 cut(s) 447, 606, 641, 778, 929, 943, 1026, 1110, 1130
TatI WGTACW 1 cut(s) 1122
TfiI GAWTC 2 cut(s) 11, 1325
Tru1I TTAA 5 cut(s) 279, 327, 947, 1001, 1050
Tru9I TTAA 5 cut(s) 279, 327, 947, 1001, 1050
TscAI CASTG 7 cut(s) 107, 577, 844, 1090, 1224, 1428, 1459
TseFI GTSAC 3 cut(s) 205, 1354, 1447
TseI GCWGC 3 cut(s) 721, 1316, 1409
Tsp45I GTSAC 3 cut(s) 205, 1354, 1447
TspDTI ATGAA 1 cut(s) 1186
TspGWI ACGGA 2 cut(s) 76, 873
TspRI CASTG 7 cut(s) 107, 577, 844, 1090, 1224, 1428, 1459
Tth111I GACNNNGTC 1 cut(s) 308
Van91I CCANNNNNTGG 1 cut(s) 1241
VpaK11BI GGWCC 5 cut(s) 290, 986, 1066, 1377, 1438
XapI RAATTY 2 cut(s) 778, 943
XbaI TCTAGA 1 cut(s) 1102
XceI RCATGY 1 cut(s) 721
XspI CTAG 5 cut(s) 657, 710, 1103, 1208, 1442
ZraI GACGTC 1 cut(s) 310
Zsp2I ATGCAT 1 cut(s) 958
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.