RchiOBHm_Chr3g0448431

Catalyzes the ferrous insertion into protoporphyrin IX

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
678076 .. 682258
4183 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41587

Sequence Viewer

Length: 1500 bp
ATGGCGGCCGAATCCATAGCAATGCTACCTTACACCATCTCCTCCTCAGACCACCACCGCCTCCTGCCACGTGTCCTCTCCGTCTCCCACTCCCACTGCTCCGCCGCTCTCTCCCGAAACTGCTTGTCGTCGTCGGCGCAATCTTCGCTGCTTTTCTCGAACCACTCGCTGCGCAAGTGCTTGCCGCCGCCGCTAAAAGCACTTGTGACCGCCGACACTCAAATCGCCAATACGACGCCGCTTGGTGTTGACGATAGGGTCGGAGTTTTGTTGCTCAACCTCGGCGGACCTGAGACTCTCGACGACGTCCAGCCTTTCTTGTTTAACCTCTTCGCAGATCCGGATATCATTAGACTGCCAAGGCTGTTCCGGTTTCTTCAGAAGCCATTGGCGCAGTTTATATCTGTTCTGAGGGCACCGAAGAGCAAAGAAGGCTATGCCGCAATTGGCGGTGGCTCTCCTCTCCGAACGATAACTGATGCACAGGCGGAAGAGTTGAGGAAGTCTCTTTGGGAGAAGGATGTCCCGGCCAAAGTGTATGTTGGTATGCGTTATTGGCATCCATTTACTGAAGAAGCTATAGAACAGATAAAAAGAGATGGAATCACAAAGCTTGTTGTCCTTCCGCTTTATCCACAATTTTCAATATCGACTAGCGGTTCAAGCCTTCGTCTGTTGGAGAGTATATTCCGGGAGGACGAGTATCTAGTCAACATGCAGCACACAGTAATACCATCCTGGTACCAGCGTGAAGGATACATAACTGCAATGGCAAATTTGATTGAAAAGGAGCTAAAACGTTTTGACTTGCCTGACAAGGTAATGATATTCTTCAGCGCCCATGGAGTGCCACTTGCATATGTGGAAGAGGCTGGTGATCCGTACAAGGCAGAAATGGAGGAATGTATAGATTTGATTATGGAAGAATTAGAAAAGAGAAATATAACTAATGCATACACCCTTGCCTATCAGAGCAGAGTCGGACCTGTGGAATGGTTAAGACCTTATACGGATGAGACAATAATTGAGCTTGGGCAAAAGGGAGTTAAAAGCCTGTTGGCAGTCCCTATAAGCTTTGTCAGTGAGCATATTGAAACTCTAGAAGAAATTGATGTGGAGTACAAAGAATTGGCTCTAAAATCTGGAATAGAGATTTGGGGGCGTGTTCCTGCACTTGGATGTGAGGCCACATTCATTTCAGATCTAGCAGACGCTGTGATTGAGAGCCTGCCATATGTTGGAGCTATGGCAGTCTCAAATCTTGAAGCTCGACAGTCTTTAGTTCCACTTGGGAGTGTAGAAGAGTTGTTAGCAGCATATGATTCACAGCGGAGGGAGCTACCACCGCCTGTGACAGTTTGGGAATGGGGCTGGACCAAAAGTGCCGAGACTTGGAATGGAAGAGCAGCTATGTTGGCAGTGGTTGTTCTATTGGTCCTAGAAGTCACCACTGGGGAGGGGTTTCTGCACCAATGGGGCATATTACCCTTACATCCATGA

Protein Analysis

499

Amino Acids

55.69

Weight (kDa)

5.12

Isoelectric Point (pI)

46.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferrochelatase PF00762 87 - 409 5.2e-111 Ferrochelatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 257
AatII GACGTC 1 cut(s) 309
Acc16I TGCGCA 1 cut(s) 173
Acc65I GGTACC 1 cut(s) 741
AccB1I GGYRCC 2 cut(s) 415, 741
AccB7I CCANNNNNTGG 1 cut(s) 1238
AccBSI CCGCTC 1 cut(s) 107
AccIII TCCGGA 1 cut(s) 340
AclI AACGTT 1 cut(s) 799
AclWI GGATC 2 cut(s) 332, 872
AcoI YGGCCR 2 cut(s) 6, 528
AcsI RAATTY 1 cut(s) 775
AcuI CTGAAG 3 cut(s) 362, 591, 817
AcvI CACGTG 1 cut(s) 71
AcyI GRCGYC 2 cut(s) 236, 306
AfaI GTAC 3 cut(s) 743, 884, 1121
AfiI CCNNNNNNNGG 3 cut(s) 1175, 1238, 1392
AflIII ACRYGT 1 cut(s) 70
AgsI TTSAA 5 cut(s) 645, 663, 785, 1094, 1265
AjnI CCWGG 1 cut(s) 737
AjuI GAANNNNNNNTTGG 2 cut(s) 1138, 1170
AluBI AGCT 9 cut(s) 578, 613, 793, 1030, 1074, 1244, 1268, 1339, 1409
AluI AGCT 9 cut(s) 578, 613, 793, 1030, 1074, 1244, 1268, 1339, 1409
Alw26I GTCTC 6 cut(s) 88, 287, 510, 1010, 1258, 1382
AlwI GGATC 2 cut(s) 332, 872
AlwNI CAGNNNCTG 1 cut(s) 1214
Aor13HI TCCGGA 1 cut(s) 340
AoxI GGCC 3 cut(s) 6, 528, 1185
ApeKI GCWGC 5 cut(s) 148, 169, 718, 1313, 1406
ApoI RAATTY 1 cut(s) 775
Asp718I GGTACC 1 cut(s) 741
AspLEI GCGC 4 cut(s) 139, 174, 394, 839
AspS9I GGNCC 4 cut(s) 287, 983, 1374, 1435
AsuC2I CCSGG 2 cut(s) 527, 692
AsuHPI GGTGA 2 cut(s) 887, 1438
AvaII GGWCC 4 cut(s) 287, 983, 1374, 1435
BaeGI GKGCMC 1 cut(s) 418
BaeI ACNNNNGTAYC 2 cut(s) 733, 766
BanI GGYRCC 2 cut(s) 415, 741
BbrPI CACGTG 1 cut(s) 71
BbvI GCAGC 5 cut(s) 135, 156, 730, 1325, 1418
BccI CCATC 3 cut(s) 44, 593, 742
BciT130I CCWGG 1 cut(s) 739
BciVI GTATCC 1 cut(s) 749
BcnI CCSGG 2 cut(s) 527, 692
BcoDI GTCTC 6 cut(s) 88, 287, 510, 1010, 1258, 1382
BfaI CTAG 5 cut(s) 654, 707, 1100, 1205, 1439
BfmI CTRYAG 1 cut(s) 579
BfoI RGCGCY 1 cut(s) 840
BfuI GTATCC 1 cut(s) 749
BglII AGATCT 1 cut(s) 1201
Bme1390I CCNGG 3 cut(s) 527, 692, 739
Bme18I GGWCC 4 cut(s) 287, 983, 1374, 1435
BmgT120I GGNCC 4 cut(s) 287, 983, 1374, 1435
BmiI GGNNCC 2 cut(s) 417, 743
BmrFI CCNGG 3 cut(s) 527, 692, 739
BmrI ACTGGG 1 cut(s) 1461
BmsI GCATC 2 cut(s) 469, 568
BmuI ACTGGG 1 cut(s) 1461
BplI GAGNNNNNCTC 2 cut(s) 490, 522
BpuMI CCSGG 2 cut(s) 527, 692
BsaAI YACGTR 1 cut(s) 71
BsaHI GRCGYC 2 cut(s) 236, 306
BsaJI CCNNGG 3 cut(s) 280, 359, 841
BsaWI WCCGGW 2 cut(s) 340, 369
BsaXI ACNNNNNCTCC 4 cut(s) 23, 53, 686, 716
Bsc4I CCNNNNNNNGG 3 cut(s) 1175, 1238, 1392
Bse1I ACTGG 1 cut(s) 1456
Bse3DI GCAATG 2 cut(s) 27, 774
BseAI TCCGGA 1 cut(s) 340
BseBI CCWGG 1 cut(s) 739
BseDI CCNNGG 3 cut(s) 280, 359, 841
BseGI GGATG 6 cut(s) 526, 559, 734, 1018, 1184, 1492
BseLI CCNNNNNNNGG 3 cut(s) 1175, 1238, 1392
BseMI GCAATG 2 cut(s) 27, 774
BseMII CTCAG 3 cut(s) 60, 282, 401
BseNI ACTGG 1 cut(s) 1456
BseRI GAGGAG 3 cut(s) 31, 34, 450
BseSI GKGCMC 1 cut(s) 418
BseX3I CGGCCG 1 cut(s) 6
BseXI GCAGC 5 cut(s) 135, 156, 730, 1325, 1418
BsgI GTGCAG 2 cut(s) 1155, 1451
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 3 cut(s) 8, 530, 1187
BshNI GGYRCC 2 cut(s) 415, 741
BsiEI CGRYCG 1 cut(s) 9
BsiSI CCGG 4 cut(s) 341, 370, 527, 691
BslFI GGGAC 2 cut(s) 509, 1049
BslI CCNNNNNNNGG 3 cut(s) 1175, 1238, 1392
BsmAI GTCTC 6 cut(s) 88, 287, 510, 1010, 1258, 1382
BsmBI CGTCTC 1 cut(s) 88
BsmFI GGGAC 2 cut(s) 509, 1049
BsnI GGCC 3 cut(s) 8, 530, 1187
Bsp1286I GDGCHC 1 cut(s) 418
Bsp13I TCCGGA 1 cut(s) 340
Bsp143I GATC 3 cut(s) 337, 877, 1201
Bsp19I CCATGG 1 cut(s) 841
BspANI GGCC 3 cut(s) 8, 530, 1187
BspCNI CTCAG 3 cut(s) 59, 283, 402
BspEI TCCGGA 1 cut(s) 340
BspLI GGNNCC 2 cut(s) 417, 743
BspPI GGATC 2 cut(s) 332, 872
BspQI GCTCTTC 2 cut(s) 416, 1396
BspT107I GGYRCC 2 cut(s) 415, 741
BsrBI CCGCTC 1 cut(s) 107
BsrDI GCAATG 2 cut(s) 27, 774
BsrI ACTGG 1 cut(s) 1456
BssECI CCNNGG 3 cut(s) 280, 359, 841
BssMI GATC 3 cut(s) 337, 877, 1201
BssNI GRCGYC 2 cut(s) 236, 306
BssT1I CCWWGG 2 cut(s) 359, 841
Bst2UI CCWGG 1 cut(s) 739
Bst4CI ACNGT 3 cut(s) 727, 1275, 1357
Bst6I CTCTTC 6 cut(s) 335, 416, 486, 861, 1296, 1396
BstACI GRCGYC 2 cut(s) 236, 306
BstBAI YACGTR 1 cut(s) 71
BstC8I GCNNGC 2 cut(s) 182, 1229
BstDEI CTNAG 3 cut(s) 46, 291, 410
BstDSI CCRYGG 1 cut(s) 841
BstF5I GGATG 6 cut(s) 526, 559, 734, 1018, 1184, 1492
BstH2I RGCGCY 1 cut(s) 840
BstHHI GCGC 4 cut(s) 139, 174, 394, 839
BstKTI GATC 3 cut(s) 340, 880, 1204
BstMAI GTCTC 6 cut(s) 88, 287, 510, 1010, 1258, 1382
BstMBI GATC 3 cut(s) 337, 877, 1201
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 9 cut(s) 145, 190, 391, 432, 556, 663, 1336, 1345, 1415
BstNI CCWGG 1 cut(s) 739
BstNSI RCATGY 1 cut(s) 718
BstSCI CCNGG 3 cut(s) 525, 690, 737
BstSFI CTRYAG 1 cut(s) 579
BstSLI GKGCMC 1 cut(s) 418
BstV1I GCAGC 5 cut(s) 135, 156, 730, 1325, 1418
BstX2I RGATCY 2 cut(s) 337, 1201
BstYI RGATCY 2 cut(s) 337, 1201
BstZI CGGCCG 1 cut(s) 6
BsuI GTATCC 1 cut(s) 749
BsuRI GGCC 3 cut(s) 8, 530, 1187
BtgI CCRYGG 1 cut(s) 841
BtsCI GGATG 6 cut(s) 526, 559, 734, 1018, 1184, 1492
BtsI GCAGTG 2 cut(s) 94, 1425
BtsIMutI CAGTG 4 cut(s) 94, 1087, 1425, 1449
Cac8I GCNNGC 2 cut(s) 182, 1229
CaiI CAGNNNCTG 1 cut(s) 1214
CfoI GCGC 4 cut(s) 139, 174, 394, 839
Cfr13I GGNCC 4 cut(s) 287, 983, 1374, 1435
CseI GACGC 2 cut(s) 244, 1220
Csp6I GTAC 3 cut(s) 742, 883, 1120
CviAII CATG 3 cut(s) 715, 842, 1497
CviQI GTAC 3 cut(s) 742, 883, 1120
DdeI CTNAG 3 cut(s) 46, 291, 410
DpnI GATC 3 cut(s) 339, 879, 1203
DpnII GATC 3 cut(s) 337, 877, 1201
DrdI GACNNNNNNGTC 1 cut(s) 257
DseDI GACNNNNNNGTC 1 cut(s) 257
EaeI YGGCCR 2 cut(s) 6, 528
EagI CGGCCG 1 cut(s) 6
Eam1104I CTCTTC 6 cut(s) 335, 416, 486, 861, 1296, 1396
EarI CTCTTC 6 cut(s) 335, 416, 486, 861, 1296, 1396
EciI GGCGGA 3 cut(s) 91, 300, 503
EclXI CGGCCG 1 cut(s) 6
Eco130I CCWWGG 2 cut(s) 359, 841
Eco32I GATATC 1 cut(s) 346
Eco47I GGWCC 4 cut(s) 287, 983, 1374, 1435
Eco52I CGGCCG 1 cut(s) 6
Eco57I CTGAAG 3 cut(s) 362, 591, 817
Eco72I CACGTG 1 cut(s) 71
EcoRII CCWGG 1 cut(s) 737
EcoRV GATATC 1 cut(s) 346
EcoT14I CCWWGG 2 cut(s) 359, 841
EcoT22I ATGCAT 1 cut(s) 955
ErhI CCWWGG 2 cut(s) 359, 841
Esp3I CGTCTC 1 cut(s) 88
FaeI CATG 3 cut(s) 718, 845, 1500
FaqI GGGAC 2 cut(s) 509, 1049
FatI CATG 3 cut(s) 714, 841, 1496
FauNDI CATATG 3 cut(s) 859, 1234, 1318
FokI GGATG 6 cut(s) 533, 546, 721, 1025, 1191, 1479
FspBI CTAG 5 cut(s) 654, 707, 1100, 1205, 1439
FspI TGCGCA 1 cut(s) 173
GlaI GCGC 4 cut(s) 138, 173, 393, 838
HaeII RGCGCY 1 cut(s) 840
HaeIII GGCC 3 cut(s) 8, 530, 1187
HapII CCGG 4 cut(s) 341, 370, 527, 691
HgaI GACGC 2 cut(s) 244, 1220
HhaI GCGC 4 cut(s) 139, 174, 394, 839
Hin1I GRCGYC 2 cut(s) 236, 306
Hin1II CATG 3 cut(s) 718, 845, 1500
Hin6I GCGC 4 cut(s) 137, 172, 392, 837
HinP1I GCGC 4 cut(s) 137, 172, 392, 837
HincII GTYRAC 2 cut(s) 250, 712
HindII GTYRAC 2 cut(s) 250, 712
HindIII AAGCTT 2 cut(s) 611, 1072
HinfI GANTC 5 cut(s) 11, 295, 603, 978, 1322
HpaII CCGG 4 cut(s) 341, 370, 527, 691
HphI GGTGA 2 cut(s) 887, 1438
Hpy166II GTNNAC 2 cut(s) 250, 712
Hpy188I TCNGA 8 cut(s) 49, 263, 381, 411, 467, 972, 983, 1201
Hpy188III TCNNGA 7 cut(s) 114, 157, 299, 341, 1100, 1143, 1262
Hpy8I GTNNAC 2 cut(s) 250, 712
Hpy99I CGWCG 5 cut(s) 133, 136, 238, 305, 308
HpyAV CCTTC 5 cut(s) 425, 511, 632, 677, 746
HpyCH4III ACNGT 3 cut(s) 727, 1275, 1357
HpyCH4IV ACGT 3 cut(s) 70, 306, 799
HpyCH4V TGCA 7 cut(s) 482, 718, 767, 857, 953, 1172, 1468
HpyF10VI GCNNNNNNNGC 9 cut(s) 145, 190, 391, 432, 556, 663, 1336, 1345, 1415
HpyF3I CTNAG 3 cut(s) 46, 291, 410
HpySE526I ACGT 3 cut(s) 70, 306, 799
Hsp92I GRCGYC 2 cut(s) 236, 306
Hsp92II CATG 3 cut(s) 718, 845, 1500
HspAI GCGC 4 cut(s) 137, 172, 392, 837
Kpn2I TCCGGA 1 cut(s) 340
KpnI GGTACC 1 cut(s) 745
Kzo9I GATC 3 cut(s) 337, 877, 1201
LguI GCTCTTC 2 cut(s) 416, 1396
LmnI GCTCC 4 cut(s) 104, 790, 1241, 1336
Lsp1109I GCAGC 5 cut(s) 135, 156, 730, 1325, 1418
LweI GCATC 2 cut(s) 469, 568
MaeI CTAG 5 cut(s) 654, 707, 1100, 1205, 1439
MaeII ACGT 3 cut(s) 70, 306, 799
MaeIII GTNAC 3 cut(s) 205, 1351, 1444
MalI GATC 3 cut(s) 339, 879, 1203
MbiI CCGCTC 1 cut(s) 107
MboI GATC 3 cut(s) 337, 877, 1201
MfeI CAATTG 1 cut(s) 444
MflI RGATCY 2 cut(s) 337, 1201
MhlI GDGCHC 1 cut(s) 418
MluCI AATT 7 cut(s) 444, 638, 775, 926, 1023, 1107, 1127
MlyI GAGTC 2 cut(s) 289, 987
MmeI TCCRAC 4 cut(s) 241, 657, 961, 1219
Mph1103I ATGCAT 1 cut(s) 955
MroI TCCGGA 1 cut(s) 340
MseI TTAA 3 cut(s) 324, 998, 1047
MslI CAYNNNNRTG 2 cut(s) 20, 1177
MspA1I CMGCKG 1 cut(s) 1330
MspI CCGG 4 cut(s) 341, 370, 527, 691
MspR9I CCNGG 3 cut(s) 527, 692, 739
MunI CAATTG 1 cut(s) 444
MvaI CCWGG 1 cut(s) 739
MwoI GCNNNNNNNGC 9 cut(s) 145, 190, 391, 432, 556, 663, 1336, 1345, 1415
NciI CCSGG 2 cut(s) 527, 692
NcoI CCATGG 1 cut(s) 841
NdeI CATATG 3 cut(s) 859, 1234, 1318
NdeII GATC 3 cut(s) 337, 877, 1201
NlaIII CATG 3 cut(s) 718, 845, 1500
NlaIV GGNNCC 2 cut(s) 417, 743
NmeAIII GCCGAG 2 cut(s) 261, 1411
NmuCI GTSAC 3 cut(s) 205, 1351, 1444
NsbI TGCGCA 1 cut(s) 173
NsiI ATGCAT 1 cut(s) 955
NspI RCATGY 1 cut(s) 718
PciSI GCTCTTC 2 cut(s) 416, 1396
PfeI GAWTC 3 cut(s) 11, 603, 1322
PflFI GACNNNGTC 1 cut(s) 305
PflMI CCANNNNNTGG 1 cut(s) 1238
PfoI TCCNGGA 1 cut(s) 690
PleI GAGTC 2 cut(s) 289, 986
PmaCI CACGTG 1 cut(s) 71
PmlI CACGTG 1 cut(s) 71
PpsI GAGTC 2 cut(s) 289, 986
Ppu21I YACGTR 1 cut(s) 71
Psp1406I AACGTT 1 cut(s) 799
Psp6I CCWGG 1 cut(s) 737
PspCI CACGTG 1 cut(s) 71
PspGI CCWGG 1 cut(s) 737
PspN4I GGNNCC 2 cut(s) 417, 743
PspPI GGNCC 4 cut(s) 287, 983, 1374, 1435
PstNI CAGNNNCTG 1 cut(s) 1214
PsuI RGATCY 2 cut(s) 337, 1201
PsyI GACNNNGTC 1 cut(s) 305
RsaI GTAC 3 cut(s) 743, 884, 1121
RsaNI GTAC 3 cut(s) 742, 883, 1120
RseI CAYNNNNRTG 2 cut(s) 20, 1177
SapI GCTCTTC 2 cut(s) 416, 1396
SaqAI TTAA 3 cut(s) 324, 998, 1047
Sau3AI GATC 3 cut(s) 337, 877, 1201
Sau96I GGNCC 4 cut(s) 287, 983, 1374, 1435
SchI GAGTC 2 cut(s) 289, 987
ScrFI CCNGG 3 cut(s) 527, 692, 739
SduI GDGCHC 1 cut(s) 418
SfaNI GCATC 2 cut(s) 469, 568
SfcI CTRYAG 1 cut(s) 579
SinI GGWCC 4 cut(s) 287, 983, 1374, 1435
SmiMI CAYNNNNRTG 2 cut(s) 20, 1177
Sse9I AATT 7 cut(s) 444, 638, 775, 926, 1023, 1107, 1127
SspMI CTAG 5 cut(s) 654, 707, 1100, 1205, 1439
StyD4I CCNGG 3 cut(s) 525, 690, 737
StyI CCWWGG 2 cut(s) 359, 841
TaaI ACNGT 3 cut(s) 727, 1275, 1357
TaiI ACGT 3 cut(s) 73, 309, 802
TaqI TCGA 4 cut(s) 158, 300, 650, 1270
TasI AATT 7 cut(s) 444, 638, 775, 926, 1023, 1107, 1127
TatI WGTACW 1 cut(s) 1119
TauI GCSGC 7 cut(s) 8, 107, 187, 190, 193, 241, 443
TfiI GAWTC 3 cut(s) 11, 603, 1322
Tru1I TTAA 3 cut(s) 324, 998, 1047
Tru9I TTAA 3 cut(s) 324, 998, 1047
TscAI CASTG 4 cut(s) 101, 1087, 1425, 1456
TseFI GTSAC 3 cut(s) 205, 1351, 1444
TseI GCWGC 5 cut(s) 148, 169, 718, 1313, 1406
Tsp45I GTSAC 3 cut(s) 205, 1351, 1444
TspDTI ATGAA 1 cut(s) 1183
TspGWI ACGGA 3 cut(s) 70, 870, 1025
TspRI CASTG 4 cut(s) 101, 1087, 1425, 1456
Tth111I GACNNNGTC 1 cut(s) 305
Van91I CCANNNNNTGG 1 cut(s) 1238
VpaK11BI GGWCC 4 cut(s) 287, 983, 1374, 1435
XapI RAATTY 1 cut(s) 775
XbaI TCTAGA 1 cut(s) 1099
XceI RCATGY 1 cut(s) 718
XspI CTAG 5 cut(s) 654, 707, 1100, 1205, 1439
ZraI GACGTC 1 cut(s) 307
Zsp2I ATGCAT 1 cut(s) 955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.