Rroxscaffold_6G00426620

Catalyzes the ferrous insertion into protoporphyrin IX

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
47300502 .. 47304756
4255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00426620.1

Sequence Viewer

Length: 1512 bp
ATGGCGGCAGAATCCATAGCAATGCTACCTTACACCATCTCCTCCTCAGACCACCACCGCCTCCTGCCACGTGTCCTCTCCGTCTCCCACTCCCACTCCCACTCCCACTCCTCCGCCGCTCTCTCCCGAAACTGCTTGTCGTCGTCGGCGCAATCTTCGCTGCTTCTCTCGAACCACTCGCTGCGCAAGTGCTTTCCGCCGCCGCTAAAAGCACTTGTGACCGCCGACACTCAAATCGCCAATACGACGCCGCTTGGTGTTGACGATAGAGTCGGAGTGTTGTTGCTCAACCTCGGCGGACCTGAGACTCTCGACGACGTCCAGCCTTTCTTGTTTAACCTCTTCGCAGATCCGGATATCATTAGACTGCCAAGGCTGTTCCGGTTTCTTCAGAAGCCATTGGCGCAGTTTATATCTGTTCTGAGGGCACCGAAGAGCAAAGAAGGCTATGCCGCAATTGGCGGTGGCTCTCCTCTCCGAACGATAACTGATGCACAGGCGGAAGAGTTGAGAAAGTCTCTTTGGGAGAAGGATGTCCCGGCCAAAGTGTATGTTGGTATGCGTTATTGGCATCCATTTACTGAAGAAGCTATAGAACAGATAAAAAGAGATGGAATCACAAAGCTTGTTGTCCTTCCGCTTTATCCACAATTTTCAATATCGACTAGCGGTTCAAGCCTTCGGCTGTTGGAGAGTATATTCCGGGAGGACGAGTATCTAGTCAACATGCAGCACACAGTAATACCATCCTGGTACCAGCGTGAAGGATACATAACTGCAATGGCAAATTTGATTGAAAAAGAGCTAAAACGTTTTGACTTGCCTGACAAGGTAATGATATTCTTCAGCGCCCATGGAGTGCCACTTGCATATGTGGAAGAGGCTGGTGATCCGTACAAGGCAGAAATGGAGGAATGTATAGATTTGATTATGGAAGAATTAGAAAAGAGAAATATAACTAATGCATACACCCTTGCCTATCAGAGCAGAGTCGGACCTGTGGAATGGTTAAGACCTTATACAGATGAGACAATAATTGAGCTTGGGCAAAAGGGAGTTAAAAGGCTGTTGGCAGTCCCTATAAGCTTTGTCAGTGAGCATATTGAAACTCTAGAAGAAATTGATGTGGAGTACAAAGAATTGGCTCTAAAATCTGGTATAGAGATTTGGGGGCGTGTTCCTGCACTTGGATGTGAGCCCACATTCATTTCAGATCTAGCAGACGCGGTGATTGAGAGCCTGCCATATGTTGGAGCTATGGCAGTCTCAAATCTTGAAGCTCGACAGTCTTTAGTTCCACTTGGGAGTGTAGAAGAGTTGTTAGCAGCATATGATTCACAGCGGAGGGAGCTACCACCGCCTGTGACAGTTTGGGAATGGGGCTGGACCAAAAGTGCCGAGACTTGGAATGGAAGAGCAGCTATGTTGGCAGTGGTTGTTCTATTGGTCCTAGAAGTCACCACTGGGGAGGGGTTTCTGCACCAATGGGGCATATTACCCTTACATCCATGA

Protein Analysis

503

Amino Acids

56.21

Weight (kDa)

5.25

Isoelectric Point (pI)

47.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferrochelatase PF00762 91 - 413 1.2e-111 Ferrochelatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 269
AatII GACGTC 1 cut(s) 321
Acc16I TGCGCA 1 cut(s) 185
Acc65I GGTACC 1 cut(s) 753
AccB1I GGYRCC 2 cut(s) 427, 753
AccB7I CCANNNNNTGG 1 cut(s) 1250
AccBSI CCGCTC 1 cut(s) 119
AccII CGCG 1 cut(s) 1226
AccIII TCCGGA 1 cut(s) 352
AclI AACGTT 1 cut(s) 811
AclWI GGATC 2 cut(s) 344, 884
AcoI YGGCCR 1 cut(s) 540
AcsI RAATTY 1 cut(s) 787
AcuI CTGAAG 3 cut(s) 374, 603, 829
AcvI CACGTG 1 cut(s) 71
AcyI GRCGYC 2 cut(s) 248, 318
AfaI GTAC 3 cut(s) 755, 896, 1133
AfiI CCNNNNNNNGG 3 cut(s) 1187, 1250, 1404
AflIII ACRYGT 1 cut(s) 70
AgsI TTSAA 5 cut(s) 657, 675, 797, 1106, 1277
AjnI CCWGG 1 cut(s) 749
AjuI GAANNNNNNNTTGG 2 cut(s) 505, 537
AluBI AGCT 9 cut(s) 590, 625, 805, 1042, 1086, 1256, 1280, 1351, 1421
AluI AGCT 9 cut(s) 590, 625, 805, 1042, 1086, 1256, 1280, 1351, 1421
Alw26I GTCTC 6 cut(s) 88, 299, 522, 1022, 1270, 1394
AlwI GGATC 2 cut(s) 344, 884
Aor13HI TCCGGA 1 cut(s) 352
AoxI GGCC 1 cut(s) 540
ApeKI GCWGC 5 cut(s) 160, 181, 730, 1325, 1418
ApoI RAATTY 1 cut(s) 787
Asp718I GGTACC 1 cut(s) 753
AspLEI GCGC 4 cut(s) 151, 186, 406, 851
AspS9I GGNCC 4 cut(s) 299, 995, 1386, 1447
AsuC2I CCSGG 2 cut(s) 539, 704
AsuHPI GGTGA 3 cut(s) 899, 1240, 1450
AvaII GGWCC 4 cut(s) 299, 995, 1386, 1447
BaeGI GKGCMC 1 cut(s) 430
BaeI ACNNNNGTAYC 2 cut(s) 745, 778
BanI GGYRCC 2 cut(s) 427, 753
BanII GRGCYC 1 cut(s) 1200
BbrPI CACGTG 1 cut(s) 71
BbvI GCAGC 5 cut(s) 147, 168, 742, 1337, 1430
BccI CCATC 3 cut(s) 44, 605, 754
BciT130I CCWGG 1 cut(s) 751
BciVI GTATCC 1 cut(s) 761
BcnI CCSGG 2 cut(s) 539, 704
BcoDI GTCTC 6 cut(s) 88, 299, 522, 1022, 1270, 1394
BfaI CTAG 5 cut(s) 666, 719, 1112, 1217, 1451
BfmI CTRYAG 1 cut(s) 591
BfoI RGCGCY 1 cut(s) 852
BfuI GTATCC 1 cut(s) 761
BglII AGATCT 1 cut(s) 1213
Bme1390I CCNGG 3 cut(s) 539, 704, 751
Bme18I GGWCC 4 cut(s) 299, 995, 1386, 1447
BmgT120I GGNCC 4 cut(s) 299, 995, 1386, 1447
BmiI GGNNCC 2 cut(s) 429, 755
BmrFI CCNGG 3 cut(s) 539, 704, 751
BmrI ACTGGG 1 cut(s) 1473
BmsI GCATC 2 cut(s) 481, 580
BmuI ACTGGG 1 cut(s) 1473
BplI GAGNNNNNCTC 2 cut(s) 502, 534
BpuMI CCSGG 2 cut(s) 539, 704
BsaAI YACGTR 1 cut(s) 71
BsaHI GRCGYC 2 cut(s) 248, 318
BsaJI CCNNGG 3 cut(s) 292, 371, 853
BsaWI WCCGGW 2 cut(s) 352, 381
Bsc4I CCNNNNNNNGG 3 cut(s) 1187, 1250, 1404
Bse1I ACTGG 1 cut(s) 1468
Bse3DI GCAATG 2 cut(s) 27, 786
BseAI TCCGGA 1 cut(s) 352
BseBI CCWGG 1 cut(s) 751
BseDI CCNNGG 3 cut(s) 292, 371, 853
BseGI GGATG 5 cut(s) 538, 571, 746, 1196, 1504
BseLI CCNNNNNNNGG 3 cut(s) 1187, 1250, 1404
BseMI GCAATG 2 cut(s) 27, 786
BseMII CTCAG 3 cut(s) 60, 294, 413
BseNI ACTGG 1 cut(s) 1468
BseRI GAGGAG 4 cut(s) 31, 34, 100, 462
BseSI GKGCMC 1 cut(s) 430
BseXI GCAGC 5 cut(s) 147, 168, 742, 1337, 1430
BsgI GTGCAG 2 cut(s) 1167, 1463
Bsh1236I CGCG 1 cut(s) 1226
BshFI GGCC 1 cut(s) 542
BshNI GGYRCC 2 cut(s) 427, 753
BsiSI CCGG 4 cut(s) 353, 382, 539, 703
BslFI GGGAC 2 cut(s) 521, 1061
BslI CCNNNNNNNGG 3 cut(s) 1187, 1250, 1404
BsmAI GTCTC 6 cut(s) 88, 299, 522, 1022, 1270, 1394
BsmBI CGTCTC 1 cut(s) 88
BsmFI GGGAC 2 cut(s) 521, 1061
BsnI GGCC 1 cut(s) 542
Bsp1286I GDGCHC 2 cut(s) 430, 1200
Bsp13I TCCGGA 1 cut(s) 352
Bsp143I GATC 3 cut(s) 349, 889, 1213
Bsp19I CCATGG 1 cut(s) 853
BspANI GGCC 1 cut(s) 542
BspCNI CTCAG 3 cut(s) 59, 295, 414
BspEI TCCGGA 1 cut(s) 352
BspFNI CGCG 1 cut(s) 1226
BspLI GGNNCC 2 cut(s) 429, 755
BspPI GGATC 2 cut(s) 344, 884
BspQI GCTCTTC 2 cut(s) 428, 1408
BspT107I GGYRCC 2 cut(s) 427, 753
BsrBI CCGCTC 1 cut(s) 119
BsrDI GCAATG 2 cut(s) 27, 786
BsrI ACTGG 1 cut(s) 1468
BssECI CCNNGG 3 cut(s) 292, 371, 853
BssMI GATC 3 cut(s) 349, 889, 1213
BssNI GRCGYC 2 cut(s) 248, 318
BssT1I CCWWGG 2 cut(s) 371, 853
Bst2UI CCWGG 1 cut(s) 751
Bst4CI ACNGT 3 cut(s) 739, 1287, 1369
Bst6I CTCTTC 6 cut(s) 347, 428, 498, 873, 1308, 1408
BstACI GRCGYC 2 cut(s) 248, 318
BstBAI YACGTR 1 cut(s) 71
BstC8I GCNNGC 1 cut(s) 1241
BstDEI CTNAG 3 cut(s) 46, 303, 422
BstDSI CCRYGG 1 cut(s) 853
BstF5I GGATG 5 cut(s) 538, 571, 746, 1196, 1504
BstFNI CGCG 1 cut(s) 1226
BstH2I RGCGCY 1 cut(s) 852
BstHHI GCGC 4 cut(s) 151, 186, 406, 851
BstKTI GATC 3 cut(s) 352, 892, 1216
BstMAI GTCTC 6 cut(s) 88, 299, 522, 1022, 1270, 1394
BstMBI GATC 3 cut(s) 349, 889, 1213
BstMWI GCNNNNNNNGC 8 cut(s) 157, 403, 444, 568, 675, 1348, 1357, 1427
BstNI CCWGG 1 cut(s) 751
BstNSI RCATGY 1 cut(s) 730
BstSCI CCNGG 3 cut(s) 537, 702, 749
BstSFI CTRYAG 1 cut(s) 591
BstSLI GKGCMC 1 cut(s) 430
BstUI CGCG 1 cut(s) 1226
BstV1I GCAGC 5 cut(s) 147, 168, 742, 1337, 1430
BstX2I RGATCY 2 cut(s) 349, 1213
BstYI RGATCY 2 cut(s) 349, 1213
BsuI GTATCC 1 cut(s) 761
BsuRI GGCC 1 cut(s) 542
BtgI CCRYGG 1 cut(s) 853
BtsCI GGATG 5 cut(s) 538, 571, 746, 1196, 1504
BtsI GCAGTG 1 cut(s) 1437
BtsIMutI CAGTG 3 cut(s) 1099, 1437, 1461
Cac8I GCNNGC 1 cut(s) 1241
CfoI GCGC 4 cut(s) 151, 186, 406, 851
Cfr13I GGNCC 4 cut(s) 299, 995, 1386, 1447
CseI GACGC 2 cut(s) 256, 1232
Csp6I GTAC 3 cut(s) 754, 895, 1132
CviAII CATG 3 cut(s) 727, 854, 1509
CviQI GTAC 3 cut(s) 754, 895, 1132
DdeI CTNAG 3 cut(s) 46, 303, 422
DpnI GATC 3 cut(s) 351, 891, 1215
DpnII GATC 3 cut(s) 349, 889, 1213
DrdI GACNNNNNNGTC 1 cut(s) 269
DseDI GACNNNNNNGTC 1 cut(s) 269
EaeI YGGCCR 1 cut(s) 540
Eam1104I CTCTTC 6 cut(s) 347, 428, 498, 873, 1308, 1408
EarI CTCTTC 6 cut(s) 347, 428, 498, 873, 1308, 1408
EciI GGCGGA 4 cut(s) 103, 186, 312, 515
Eco130I CCWWGG 2 cut(s) 371, 853
Eco24I GRGCYC 1 cut(s) 1200
Eco32I GATATC 1 cut(s) 358
Eco47I GGWCC 4 cut(s) 299, 995, 1386, 1447
Eco57I CTGAAG 3 cut(s) 374, 603, 829
Eco72I CACGTG 1 cut(s) 71
EcoRII CCWGG 1 cut(s) 749
EcoRV GATATC 1 cut(s) 358
EcoT14I CCWWGG 2 cut(s) 371, 853
EcoT22I ATGCAT 1 cut(s) 967
EcoT38I GRGCYC 1 cut(s) 1200
ErhI CCWWGG 2 cut(s) 371, 853
Esp3I CGTCTC 1 cut(s) 88
FaeI CATG 3 cut(s) 730, 857, 1512
FaqI GGGAC 2 cut(s) 521, 1061
FatI CATG 3 cut(s) 726, 853, 1508
FauNDI CATATG 3 cut(s) 871, 1246, 1330
FokI GGATG 5 cut(s) 545, 558, 733, 1203, 1491
FriOI GRGCYC 1 cut(s) 1200
FspBI CTAG 5 cut(s) 666, 719, 1112, 1217, 1451
FspI TGCGCA 1 cut(s) 185
GlaI GCGC 4 cut(s) 150, 185, 405, 850
HaeII RGCGCY 1 cut(s) 852
HaeIII GGCC 1 cut(s) 542
HapII CCGG 4 cut(s) 353, 382, 539, 703
HgaI GACGC 2 cut(s) 256, 1232
HhaI GCGC 4 cut(s) 151, 186, 406, 851
Hin1I GRCGYC 2 cut(s) 248, 318
Hin1II CATG 3 cut(s) 730, 857, 1512
Hin6I GCGC 4 cut(s) 149, 184, 404, 849
HinP1I GCGC 4 cut(s) 149, 184, 404, 849
HincII GTYRAC 2 cut(s) 262, 724
HindII GTYRAC 2 cut(s) 262, 724
HindIII AAGCTT 2 cut(s) 623, 1084
HinfI GANTC 6 cut(s) 11, 270, 307, 615, 990, 1334
HpaII CCGG 4 cut(s) 353, 382, 539, 703
HphI GGTGA 3 cut(s) 899, 1240, 1450
Hpy166II GTNNAC 2 cut(s) 262, 724
Hpy188I TCNGA 8 cut(s) 49, 275, 393, 423, 479, 984, 995, 1213
Hpy188III TCNNGA 6 cut(s) 126, 169, 311, 353, 1112, 1274
Hpy8I GTNNAC 2 cut(s) 262, 724
Hpy99I CGWCG 5 cut(s) 145, 148, 250, 317, 320
HpyAV CCTTC 5 cut(s) 437, 523, 644, 689, 758
HpyCH4III ACNGT 3 cut(s) 739, 1287, 1369
HpyCH4IV ACGT 3 cut(s) 70, 318, 811
HpyCH4V TGCA 7 cut(s) 494, 730, 779, 869, 965, 1184, 1480
HpyF10VI GCNNNNNNNGC 8 cut(s) 157, 403, 444, 568, 675, 1348, 1357, 1427
HpyF3I CTNAG 3 cut(s) 46, 303, 422
HpySE526I ACGT 3 cut(s) 70, 318, 811
Hsp92I GRCGYC 2 cut(s) 248, 318
Hsp92II CATG 3 cut(s) 730, 857, 1512
HspAI GCGC 4 cut(s) 149, 184, 404, 849
Kpn2I TCCGGA 1 cut(s) 352
KpnI GGTACC 1 cut(s) 757
Kzo9I GATC 3 cut(s) 349, 889, 1213
LguI GCTCTTC 2 cut(s) 428, 1408
LmnI GCTCC 2 cut(s) 1253, 1348
Lsp1109I GCAGC 5 cut(s) 147, 168, 742, 1337, 1430
LweI GCATC 2 cut(s) 481, 580
MaeI CTAG 5 cut(s) 666, 719, 1112, 1217, 1451
MaeII ACGT 3 cut(s) 70, 318, 811
MaeIII GTNAC 3 cut(s) 217, 1363, 1456
MalI GATC 3 cut(s) 351, 891, 1215
MbiI CCGCTC 1 cut(s) 119
MboI GATC 3 cut(s) 349, 889, 1213
MfeI CAATTG 1 cut(s) 456
MflI RGATCY 2 cut(s) 349, 1213
MhlI GDGCHC 2 cut(s) 430, 1200
MluCI AATT 7 cut(s) 456, 650, 787, 938, 1035, 1119, 1139
MlyI GAGTC 3 cut(s) 279, 301, 999
MmeI TCCRAC 4 cut(s) 253, 669, 973, 1231
Mph1103I ATGCAT 1 cut(s) 967
MroI TCCGGA 1 cut(s) 352
MseI TTAA 3 cut(s) 336, 1010, 1059
MslI CAYNNNNRTG 2 cut(s) 20, 1189
MspA1I CMGCKG 1 cut(s) 1342
MspI CCGG 4 cut(s) 353, 382, 539, 703
MspR9I CCNGG 3 cut(s) 539, 704, 751
MunI CAATTG 1 cut(s) 456
MvaI CCWGG 1 cut(s) 751
MvnI CGCG 1 cut(s) 1226
MwoI GCNNNNNNNGC 8 cut(s) 157, 403, 444, 568, 675, 1348, 1357, 1427
NciI CCSGG 2 cut(s) 539, 704
NcoI CCATGG 1 cut(s) 853
NdeI CATATG 3 cut(s) 871, 1246, 1330
NdeII GATC 3 cut(s) 349, 889, 1213
NlaIII CATG 3 cut(s) 730, 857, 1512
NlaIV GGNNCC 2 cut(s) 429, 755
NmeAIII GCCGAG 2 cut(s) 273, 1423
NmuCI GTSAC 3 cut(s) 217, 1363, 1456
NsbI TGCGCA 1 cut(s) 185
NsiI ATGCAT 1 cut(s) 967
NspI RCATGY 1 cut(s) 730
PciSI GCTCTTC 2 cut(s) 428, 1408
PfeI GAWTC 3 cut(s) 11, 615, 1334
PflFI GACNNNGTC 1 cut(s) 317
PflMI CCANNNNNTGG 1 cut(s) 1250
PfoI TCCNGGA 1 cut(s) 702
PleI GAGTC 3 cut(s) 278, 301, 998
PmaCI CACGTG 1 cut(s) 71
PmlI CACGTG 1 cut(s) 71
PpsI GAGTC 3 cut(s) 278, 301, 998
Ppu21I YACGTR 1 cut(s) 71
Psp1406I AACGTT 1 cut(s) 811
Psp6I CCWGG 1 cut(s) 749
PspCI CACGTG 1 cut(s) 71
PspGI CCWGG 1 cut(s) 749
PspN4I GGNNCC 2 cut(s) 429, 755
PspPI GGNCC 4 cut(s) 299, 995, 1386, 1447
PsuI RGATCY 2 cut(s) 349, 1213
PsyI GACNNNGTC 1 cut(s) 317
RsaI GTAC 3 cut(s) 755, 896, 1133
RsaNI GTAC 3 cut(s) 754, 895, 1132
RseI CAYNNNNRTG 2 cut(s) 20, 1189
SapI GCTCTTC 2 cut(s) 428, 1408
SaqAI TTAA 3 cut(s) 336, 1010, 1059
Sau3AI GATC 3 cut(s) 349, 889, 1213
Sau96I GGNCC 4 cut(s) 299, 995, 1386, 1447
SchI GAGTC 3 cut(s) 279, 301, 999
ScrFI CCNGG 3 cut(s) 539, 704, 751
SduI GDGCHC 2 cut(s) 430, 1200
SfaNI GCATC 2 cut(s) 481, 580
SfcI CTRYAG 1 cut(s) 591
SinI GGWCC 4 cut(s) 299, 995, 1386, 1447
SmiMI CAYNNNNRTG 2 cut(s) 20, 1189
Sse9I AATT 7 cut(s) 456, 650, 787, 938, 1035, 1119, 1139
SspMI CTAG 5 cut(s) 666, 719, 1112, 1217, 1451
StyD4I CCNGG 3 cut(s) 537, 702, 749
StyI CCWWGG 2 cut(s) 371, 853
TaaI ACNGT 3 cut(s) 739, 1287, 1369
TaiI ACGT 3 cut(s) 73, 321, 814
TaqI TCGA 4 cut(s) 170, 312, 662, 1282
TasI AATT 7 cut(s) 456, 650, 787, 938, 1035, 1119, 1139
TatI WGTACW 1 cut(s) 1131
TauI GCSGC 6 cut(s) 8, 119, 202, 205, 253, 455
TfiI GAWTC 3 cut(s) 11, 615, 1334
Tru1I TTAA 3 cut(s) 336, 1010, 1059
Tru9I TTAA 3 cut(s) 336, 1010, 1059
TscAI CASTG 3 cut(s) 1099, 1437, 1468
TseFI GTSAC 3 cut(s) 217, 1363, 1456
TseI GCWGC 5 cut(s) 160, 181, 730, 1325, 1418
Tsp45I GTSAC 3 cut(s) 217, 1363, 1456
TspDTI ATGAA 1 cut(s) 1195
TspGWI ACGGA 2 cut(s) 70, 882
TspRI CASTG 3 cut(s) 1099, 1437, 1468
Tth111I GACNNNGTC 1 cut(s) 317
Van91I CCANNNNNTGG 1 cut(s) 1250
VpaK11BI GGWCC 4 cut(s) 299, 995, 1386, 1447
XapI RAATTY 1 cut(s) 787
XbaI TCTAGA 1 cut(s) 1111
XceI RCATGY 1 cut(s) 730
XspI CTAG 5 cut(s) 666, 719, 1112, 1217, 1451
ZraI GACGTC 1 cut(s) 319
Zsp2I ATGCAT 1 cut(s) 967
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.