Rh3AG011800

Catalyzes the ferrous insertion into protoporphyrin IX

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
709620 .. 713388
3769 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG011800.1

Sequence Viewer

Length: 1506 bp
ATGGCGGCAGAATCCATAGCAATGCTACCTTACACCATCTCCTCCTCAGACCACCACCGCCTCCTGCCACGTGTCCTCTCCGTCTCCCACTCCCACTCCCCTTCCTCCGCCGCTCTCTCCCGAAACTGCTTGTCGTCGTCGGCGCAATCTTCGCTGCTTTTCTCGAACCACTCGCTGCGCAAGTGCTTTCCGCCTCCGCTAAAAGCACTTGTGACCGCCGACACTCAAATCGCCAATACGACGCCGCTTGGTGTTGACGATAGGGTCGGAGTTTTGTTGCTCAACCTCGGCGGACCTGAGACTCTCGACGACGTCCAGCCTTTCTTGTTTAACCTCTTCGCAGATCCGGATATCATTAGACTGCCAAGGCTATTCCGGTTTCTTCAGAAGCCATTGGCGCAGTTTATATCTGTTCTGAGGGCACCGAAGAGCAAAGAAGGCTATGCCGCAATTGGCGGTGGCTCTCCTCTCCGAACGATAACTGATGCACAGGCGGAAGAGTTGAGGAAGTCTCTTTGGGAGAAGGATGTCCCGGCCAAAGTGTATGTTGGTATGCGTTATTGGCATCCGTTTACTGAAGAAGCTATAGAACAGATAAAAAGAGATGGAATCACAAAGCTTGTTGTCCTTCCGCTTTATCCACAATTTTCAATATCGACTAGCGGTTCAAGCCTTCGGCTGTTGGAGAGTATATTCCGGGAGGACGAGTATCTAGTCAACATGCAGCACACAGTAATACCATCCTGGTACCAGCGTGAAGGATACATAACTGCAATGGCAAATTTGATTGAAAAAGAGCTAAAACGTTTTGACTTGCCTGACAAGGTAATGATATTCTTCAGCGCCCATGGAGTGCCACTTGCATATGTGGAAGAGGCTGGTGATCCGTACAAGGCAGAAATGGAGGAATGTATAGATTTGATTATGGAAGAATTAGAAAAGAGAAATATAACTAATGCATACACCCTTGCTTATCAGAGCAGAGTTGGACCTGTGGAATGGTTAAGACCTTATACGGATGAGACAATAATTGAGCTTGGGCAAAAGGGAGTTAAAAGGCTGTTGGCAGTCCCTATAAGCTTTGTCAGTGAGCATATTGAAACTCTAGAAGAAATTGATGTGGAGTACAAAGAATTGGCTCTAAAATCTGGTATAGAGATTTGGGGGCGTGTTCCTGCACTTGGATGTGAGGCCACATTCATTTCAGATCTAGCAGACGCTGTGATTGAGAGCCTGCCATATGTTGGAGCTATGGCAGTCTCAAATCTTGAAGCTCGACAGTCTTTAGTTCCACTTGGGAGTGTAGAAGAGTTGTTAGCAGCATATGATTCACAGCGGAGGGAGCTACCACCGCCTGTGACAGTTTGGGAATGGGGCTGGACCAAAAGTGCCGAGACTTGGAATGGAAGAGCAGCTATGTTGGCAGTGGTTGTTCTATTGGTCCTAGAAGTCACCACTGGGGAGGGGTTTCTGCACCAATGGGGCATATTACCCTTACATCCATGA

Protein Analysis

501

Amino Acids

55.96

Weight (kDa)

5.16

Isoelectric Point (pI)

48.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferrochelatase PF00762 89 - 411 5.3e-111 Ferrochelatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 263
AatII GACGTC 1 cut(s) 315
Acc16I TGCGCA 1 cut(s) 179
Acc65I GGTACC 1 cut(s) 747
AccB1I GGYRCC 2 cut(s) 421, 747
AccB7I CCANNNNNTGG 1 cut(s) 1244
AccBSI CCGCTC 1 cut(s) 113
AccIII TCCGGA 1 cut(s) 346
AclI AACGTT 1 cut(s) 805
AclWI GGATC 2 cut(s) 338, 878
AcoI YGGCCR 1 cut(s) 534
AcsI RAATTY 1 cut(s) 781
AcuI CTGAAG 3 cut(s) 368, 597, 823
AcvI CACGTG 1 cut(s) 71
AcyI GRCGYC 2 cut(s) 242, 312
AfaI GTAC 3 cut(s) 749, 890, 1127
AfiI CCNNNNNNNGG 3 cut(s) 1181, 1244, 1398
AflIII ACRYGT 1 cut(s) 70
AgsI TTSAA 5 cut(s) 651, 669, 791, 1100, 1271
AjnI CCWGG 1 cut(s) 743
AluBI AGCT 9 cut(s) 584, 619, 799, 1036, 1080, 1250, 1274, 1345, 1415
AluI AGCT 9 cut(s) 584, 619, 799, 1036, 1080, 1250, 1274, 1345, 1415
Alw26I GTCTC 6 cut(s) 88, 293, 516, 1016, 1264, 1388
AlwI GGATC 2 cut(s) 338, 878
AlwNI CAGNNNCTG 1 cut(s) 1220
Aor13HI TCCGGA 1 cut(s) 346
AoxI GGCC 2 cut(s) 534, 1191
ApeKI GCWGC 5 cut(s) 154, 175, 724, 1319, 1412
ApoI RAATTY 1 cut(s) 781
Asp718I GGTACC 1 cut(s) 747
AspLEI GCGC 4 cut(s) 145, 180, 400, 845
AspS9I GGNCC 4 cut(s) 293, 989, 1380, 1441
AsuC2I CCSGG 2 cut(s) 533, 698
AsuHPI GGTGA 2 cut(s) 893, 1444
AvaII GGWCC 4 cut(s) 293, 989, 1380, 1441
BaeGI GKGCMC 1 cut(s) 424
BaeI ACNNNNGTAYC 2 cut(s) 739, 772
BanI GGYRCC 2 cut(s) 421, 747
BbrPI CACGTG 1 cut(s) 71
BbvI GCAGC 5 cut(s) 141, 162, 736, 1331, 1424
BccI CCATC 3 cut(s) 44, 599, 748
BciT130I CCWGG 1 cut(s) 745
BciVI GTATCC 1 cut(s) 755
BcnI CCSGG 2 cut(s) 533, 698
BcoDI GTCTC 6 cut(s) 88, 293, 516, 1016, 1264, 1388
BfaI CTAG 5 cut(s) 660, 713, 1106, 1211, 1445
BfmI CTRYAG 1 cut(s) 585
BfoI RGCGCY 1 cut(s) 846
BfuI GTATCC 1 cut(s) 755
BglII AGATCT 1 cut(s) 1207
BisI GCNGC 9 cut(s) 6, 111, 155, 176, 245, 447, 725, 1320, 1413
BlsI GCNGC 9 cut(s) 7, 112, 156, 177, 246, 448, 726, 1321, 1414
Bme1390I CCNGG 3 cut(s) 533, 698, 745
Bme18I GGWCC 4 cut(s) 293, 989, 1380, 1441
BmgT120I GGNCC 4 cut(s) 293, 989, 1380, 1441
BmiI GGNNCC 2 cut(s) 423, 749
BmrFI CCNGG 3 cut(s) 533, 698, 745
BmrI ACTGGG 1 cut(s) 1467
BmsI GCATC 2 cut(s) 475, 574
BmuI ACTGGG 1 cut(s) 1467
BplI GAGNNNNNCTC 2 cut(s) 496, 528
BpuMI CCSGG 2 cut(s) 533, 698
BsaAI YACGTR 1 cut(s) 71
BsaHI GRCGYC 2 cut(s) 242, 312
BsaJI CCNNGG 3 cut(s) 286, 365, 847
BsaWI WCCGGW 2 cut(s) 346, 375
BsaXI ACNNNNNCTCC 6 cut(s) 23, 53, 80, 110, 692, 722
Bsc4I CCNNNNNNNGG 3 cut(s) 1181, 1244, 1398
Bse1I ACTGG 1 cut(s) 1462
Bse3DI GCAATG 2 cut(s) 27, 780
BseAI TCCGGA 1 cut(s) 346
BseBI CCWGG 1 cut(s) 745
BseDI CCNNGG 3 cut(s) 286, 365, 847
BseGI GGATG 6 cut(s) 532, 565, 740, 1024, 1190, 1498
BseLI CCNNNNNNNGG 3 cut(s) 1181, 1244, 1398
BseMI GCAATG 2 cut(s) 27, 780
BseMII CTCAG 3 cut(s) 60, 288, 407
BseNI ACTGG 1 cut(s) 1462
BseRI GAGGAG 3 cut(s) 31, 34, 456
BseSI GKGCMC 1 cut(s) 424
BseXI GCAGC 5 cut(s) 141, 162, 736, 1331, 1424
BsgI GTGCAG 2 cut(s) 1161, 1457
BshFI GGCC 2 cut(s) 536, 1193
BshNI GGYRCC 2 cut(s) 421, 747
BsiSI CCGG 4 cut(s) 347, 376, 533, 697
BslFI GGGAC 2 cut(s) 515, 1055
BslI CCNNNNNNNGG 3 cut(s) 1181, 1244, 1398
BsmAI GTCTC 6 cut(s) 88, 293, 516, 1016, 1264, 1388
BsmBI CGTCTC 1 cut(s) 88
BsmFI GGGAC 2 cut(s) 515, 1055
BsnI GGCC 2 cut(s) 536, 1193
Bsp1286I GDGCHC 1 cut(s) 424
Bsp13I TCCGGA 1 cut(s) 346
Bsp143I GATC 3 cut(s) 343, 883, 1207
Bsp19I CCATGG 1 cut(s) 847
BspANI GGCC 2 cut(s) 536, 1193
BspCNI CTCAG 3 cut(s) 59, 289, 408
BspEI TCCGGA 1 cut(s) 346
BspLI GGNNCC 2 cut(s) 423, 749
BspPI GGATC 2 cut(s) 338, 878
BspQI GCTCTTC 2 cut(s) 422, 1402
BspT107I GGYRCC 2 cut(s) 421, 747
BsrBI CCGCTC 1 cut(s) 113
BsrDI GCAATG 2 cut(s) 27, 780
BsrI ACTGG 1 cut(s) 1462
BssECI CCNNGG 3 cut(s) 286, 365, 847
BssMI GATC 3 cut(s) 343, 883, 1207
BssNI GRCGYC 2 cut(s) 242, 312
BssT1I CCWWGG 2 cut(s) 365, 847
Bst2UI CCWGG 1 cut(s) 745
Bst4CI ACNGT 3 cut(s) 733, 1281, 1363
Bst6I CTCTTC 6 cut(s) 341, 422, 492, 867, 1302, 1402
BstACI GRCGYC 2 cut(s) 242, 312
BstBAI YACGTR 1 cut(s) 71
BstC8I GCNNGC 1 cut(s) 1235
BstDEI CTNAG 3 cut(s) 46, 297, 416
BstDSI CCRYGG 1 cut(s) 847
BstF5I GGATG 6 cut(s) 532, 565, 740, 1024, 1190, 1498
BstH2I RGCGCY 1 cut(s) 846
BstHHI GCGC 4 cut(s) 145, 180, 400, 845
BstKTI GATC 3 cut(s) 346, 886, 1210
BstMAI GTCTC 6 cut(s) 88, 293, 516, 1016, 1264, 1388
BstMBI GATC 3 cut(s) 343, 883, 1207
BstMWI GCNNNNNNNGC 8 cut(s) 151, 397, 438, 562, 669, 1342, 1351, 1421
BstNI CCWGG 1 cut(s) 745
BstNSI RCATGY 1 cut(s) 724
BstSCI CCNGG 3 cut(s) 531, 696, 743
BstSFI CTRYAG 1 cut(s) 585
BstSLI GKGCMC 1 cut(s) 424
BstV1I GCAGC 5 cut(s) 141, 162, 736, 1331, 1424
BstX2I RGATCY 2 cut(s) 343, 1207
BstYI RGATCY 2 cut(s) 343, 1207
BsuI GTATCC 1 cut(s) 755
BsuRI GGCC 2 cut(s) 536, 1193
BtgI CCRYGG 1 cut(s) 847
BtsCI GGATG 6 cut(s) 532, 565, 740, 1024, 1190, 1498
BtsI GCAGTG 1 cut(s) 1431
BtsIMutI CAGTG 3 cut(s) 1093, 1431, 1455
Cac8I GCNNGC 1 cut(s) 1235
CaiI CAGNNNCTG 1 cut(s) 1220
CfoI GCGC 4 cut(s) 145, 180, 400, 845
Cfr13I GGNCC 4 cut(s) 293, 989, 1380, 1441
CseI GACGC 2 cut(s) 250, 1226
Csp6I GTAC 3 cut(s) 748, 889, 1126
CviAII CATG 3 cut(s) 721, 848, 1503
CviQI GTAC 3 cut(s) 748, 889, 1126
DdeI CTNAG 3 cut(s) 46, 297, 416
DpnI GATC 3 cut(s) 345, 885, 1209
DpnII GATC 3 cut(s) 343, 883, 1207
DrdI GACNNNNNNGTC 1 cut(s) 263
DseDI GACNNNNNNGTC 1 cut(s) 263
EaeI YGGCCR 1 cut(s) 534
Eam1104I CTCTTC 6 cut(s) 341, 422, 492, 867, 1302, 1402
EarI CTCTTC 6 cut(s) 341, 422, 492, 867, 1302, 1402
EciI GGCGGA 4 cut(s) 97, 180, 306, 509
Eco130I CCWWGG 2 cut(s) 365, 847
Eco32I GATATC 1 cut(s) 352
Eco47I GGWCC 4 cut(s) 293, 989, 1380, 1441
Eco57I CTGAAG 3 cut(s) 368, 597, 823
Eco72I CACGTG 1 cut(s) 71
EcoRII CCWGG 1 cut(s) 743
EcoRV GATATC 1 cut(s) 352
EcoT14I CCWWGG 2 cut(s) 365, 847
EcoT22I ATGCAT 1 cut(s) 961
ErhI CCWWGG 2 cut(s) 365, 847
Esp3I CGTCTC 1 cut(s) 88
FaeI CATG 3 cut(s) 724, 851, 1506
FaqI GGGAC 2 cut(s) 515, 1055
FatI CATG 3 cut(s) 720, 847, 1502
FauNDI CATATG 3 cut(s) 865, 1240, 1324
Fnu4HI GCNGC 9 cut(s) 6, 111, 155, 176, 245, 447, 725, 1320, 1413
FokI GGATG 6 cut(s) 539, 552, 727, 1031, 1197, 1485
Fsp4HI GCNGC 9 cut(s) 6, 111, 155, 176, 245, 447, 725, 1320, 1413
FspBI CTAG 5 cut(s) 660, 713, 1106, 1211, 1445
FspI TGCGCA 1 cut(s) 179
GlaI GCGC 4 cut(s) 144, 179, 399, 844
GluI GCNGC 9 cut(s) 6, 111, 155, 176, 245, 447, 725, 1320, 1413
HaeII RGCGCY 1 cut(s) 846
HaeIII GGCC 2 cut(s) 536, 1193
HapII CCGG 4 cut(s) 347, 376, 533, 697
HgaI GACGC 2 cut(s) 250, 1226
HhaI GCGC 4 cut(s) 145, 180, 400, 845
Hin1I GRCGYC 2 cut(s) 242, 312
Hin1II CATG 3 cut(s) 724, 851, 1506
Hin6I GCGC 4 cut(s) 143, 178, 398, 843
HinP1I GCGC 4 cut(s) 143, 178, 398, 843
HincII GTYRAC 2 cut(s) 256, 718
HindII GTYRAC 2 cut(s) 256, 718
HindIII AAGCTT 2 cut(s) 617, 1078
HinfI GANTC 4 cut(s) 11, 301, 609, 1328
HpaII CCGG 4 cut(s) 347, 376, 533, 697
HphI GGTGA 2 cut(s) 893, 1444
Hpy166II GTNNAC 3 cut(s) 256, 573, 718
Hpy188I TCNGA 7 cut(s) 49, 269, 387, 417, 473, 978, 1207
Hpy188III TCNNGA 6 cut(s) 120, 163, 305, 347, 1106, 1268
Hpy8I GTNNAC 3 cut(s) 256, 573, 718
Hpy99I CGWCG 5 cut(s) 139, 142, 244, 311, 314
HpyAV CCTTC 6 cut(s) 111, 431, 517, 638, 683, 752
HpyCH4III ACNGT 3 cut(s) 733, 1281, 1363
HpyCH4IV ACGT 3 cut(s) 70, 312, 805
HpyCH4V TGCA 7 cut(s) 488, 724, 773, 863, 959, 1178, 1474
HpyF10VI GCNNNNNNNGC 8 cut(s) 151, 397, 438, 562, 669, 1342, 1351, 1421
HpyF3I CTNAG 3 cut(s) 46, 297, 416
HpySE526I ACGT 3 cut(s) 70, 312, 805
Hsp92I GRCGYC 2 cut(s) 242, 312
Hsp92II CATG 3 cut(s) 724, 851, 1506
HspAI GCGC 4 cut(s) 143, 178, 398, 843
Kpn2I TCCGGA 1 cut(s) 346
KpnI GGTACC 1 cut(s) 751
Kzo9I GATC 3 cut(s) 343, 883, 1207
LguI GCTCTTC 2 cut(s) 422, 1402
LmnI GCTCC 2 cut(s) 1247, 1342
Lsp1109I GCAGC 5 cut(s) 141, 162, 736, 1331, 1424
LweI GCATC 2 cut(s) 475, 574
MaeI CTAG 5 cut(s) 660, 713, 1106, 1211, 1445
MaeII ACGT 3 cut(s) 70, 312, 805
MaeIII GTNAC 3 cut(s) 211, 1357, 1450
MalI GATC 3 cut(s) 345, 885, 1209
MbiI CCGCTC 1 cut(s) 113
MboI GATC 3 cut(s) 343, 883, 1207
MfeI CAATTG 1 cut(s) 450
MflI RGATCY 2 cut(s) 343, 1207
MhlI GDGCHC 1 cut(s) 424
MluCI AATT 7 cut(s) 450, 644, 781, 932, 1029, 1113, 1133
MlyI GAGTC 1 cut(s) 295
MmeI TCCRAC 4 cut(s) 247, 663, 967, 1225
Mph1103I ATGCAT 1 cut(s) 961
MroI TCCGGA 1 cut(s) 346
MseI TTAA 3 cut(s) 330, 1004, 1053
MslI CAYNNNNRTG 2 cut(s) 20, 1183
MspA1I CMGCKG 1 cut(s) 1336
MspI CCGG 4 cut(s) 347, 376, 533, 697
MspR9I CCNGG 3 cut(s) 533, 698, 745
MunI CAATTG 1 cut(s) 450
MvaI CCWGG 1 cut(s) 745
MwoI GCNNNNNNNGC 8 cut(s) 151, 397, 438, 562, 669, 1342, 1351, 1421
NciI CCSGG 2 cut(s) 533, 698
NcoI CCATGG 1 cut(s) 847
NdeI CATATG 3 cut(s) 865, 1240, 1324
NdeII GATC 3 cut(s) 343, 883, 1207
NlaIII CATG 3 cut(s) 724, 851, 1506
NlaIV GGNNCC 2 cut(s) 423, 749
NmeAIII GCCGAG 2 cut(s) 267, 1417
NmuCI GTSAC 3 cut(s) 211, 1357, 1450
NsbI TGCGCA 1 cut(s) 179
NsiI ATGCAT 1 cut(s) 961
NspI RCATGY 1 cut(s) 724
PciSI GCTCTTC 2 cut(s) 422, 1402
PfeI GAWTC 3 cut(s) 11, 609, 1328
PflFI GACNNNGTC 1 cut(s) 311
PflMI CCANNNNNTGG 1 cut(s) 1244
PfoI TCCNGGA 1 cut(s) 696
PkrI GCNGC 9 cut(s) 7, 112, 156, 177, 246, 448, 726, 1321, 1414
PleI GAGTC 1 cut(s) 295
PmaCI CACGTG 1 cut(s) 71
PmlI CACGTG 1 cut(s) 71
PpsI GAGTC 1 cut(s) 295
Ppu21I YACGTR 1 cut(s) 71
Psp1406I AACGTT 1 cut(s) 805
Psp6I CCWGG 1 cut(s) 743
PspCI CACGTG 1 cut(s) 71
PspGI CCWGG 1 cut(s) 743
PspN4I GGNNCC 2 cut(s) 423, 749
PspPI GGNCC 4 cut(s) 293, 989, 1380, 1441
PstNI CAGNNNCTG 1 cut(s) 1220
PsuI RGATCY 2 cut(s) 343, 1207
PsyI GACNNNGTC 1 cut(s) 311
RsaI GTAC 3 cut(s) 749, 890, 1127
RsaNI GTAC 3 cut(s) 748, 889, 1126
RseI CAYNNNNRTG 2 cut(s) 20, 1183
SapI GCTCTTC 2 cut(s) 422, 1402
SaqAI TTAA 3 cut(s) 330, 1004, 1053
SatI GCNGC 9 cut(s) 6, 111, 155, 176, 245, 447, 725, 1320, 1413
Sau3AI GATC 3 cut(s) 343, 883, 1207
Sau96I GGNCC 4 cut(s) 293, 989, 1380, 1441
SchI GAGTC 1 cut(s) 295
ScrFI CCNGG 3 cut(s) 533, 698, 745
SduI GDGCHC 1 cut(s) 424
SfaNI GCATC 2 cut(s) 475, 574
SfcI CTRYAG 1 cut(s) 585
SinI GGWCC 4 cut(s) 293, 989, 1380, 1441
SmiMI CAYNNNNRTG 2 cut(s) 20, 1183
Sse9I AATT 7 cut(s) 450, 644, 781, 932, 1029, 1113, 1133
SspMI CTAG 5 cut(s) 660, 713, 1106, 1211, 1445
StyD4I CCNGG 3 cut(s) 531, 696, 743
StyI CCWWGG 2 cut(s) 365, 847
TaaI ACNGT 3 cut(s) 733, 1281, 1363
TaiI ACGT 3 cut(s) 73, 315, 808
TaqI TCGA 4 cut(s) 164, 306, 656, 1276
TasI AATT 7 cut(s) 450, 644, 781, 932, 1029, 1113, 1133
TatI WGTACW 1 cut(s) 1125
TauI GCSGC 4 cut(s) 8, 113, 247, 449
TfiI GAWTC 3 cut(s) 11, 609, 1328
Tru1I TTAA 3 cut(s) 330, 1004, 1053
Tru9I TTAA 3 cut(s) 330, 1004, 1053
TscAI CASTG 3 cut(s) 1093, 1431, 1462
TseFI GTSAC 3 cut(s) 211, 1357, 1450
TseI GCWGC 5 cut(s) 154, 175, 724, 1319, 1412
Tsp45I GTSAC 3 cut(s) 211, 1357, 1450
TspDTI ATGAA 1 cut(s) 1189
TspGWI ACGGA 4 cut(s) 70, 558, 876, 1031
TspRI CASTG 3 cut(s) 1093, 1431, 1462
Tth111I GACNNNGTC 1 cut(s) 311
Van91I CCANNNNNTGG 1 cut(s) 1244
VpaK11BI GGWCC 4 cut(s) 293, 989, 1380, 1441
XapI RAATTY 1 cut(s) 781
XbaI TCTAGA 1 cut(s) 1105
XceI RCATGY 1 cut(s) 724
XspI CTAG 5 cut(s) 660, 713, 1106, 1211, 1445
ZraI GACGTC 1 cut(s) 313
Zsp2I ATGCAT 1 cut(s) 961
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.