mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05220 AT3G05220 |
| fragaria_vesca | FvH4_6g05480 FvH4_6g05480 FvH4_6g05480 FvH4_6g05480 |
| malus_domestica | MD04G1208200.v1.1 MD12G1222200.v1.1 |
| prunus_persica | Prupe.6G329100_v2.0.a1 Prupe.6G329100_v2.0.a1 |
| pyrus_communis | pycom04g18420 pycom12g20840 |
| rosa_chinensis | RchiOBHm_Chr3g0454261 |
| rosa_laevigata | RLG00000025471 |
| rosa_multiflora | Rmu_sc0005231.1_g000005 |
| rosa_roxburghii | Rroxscaffold_165G00437040 Rroxscaffold_6G00425300 |
| rosa_rugosa | Rorug02G0653600 |
| rosa_samantha | Rh3AG057200 Rh3BG058700 Rh3CG057900 Rh3DG059200 |
| rosa_wichuraiana | Rw0G001730 Rw3G004400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1564 |
| AccI | GTMKAC | 1 cut(s) | 113 |
| AccII | CGCG | 2 cut(s) | 1419, 1705 |
| AciI | CCGC | 8 cut(s) | 795, 822, 1322, 1417, 1419, 1533, 1547, 1705 |
| AclWI | GGATC | 1 cut(s) | 161 |
| AcoI | YGGCCR | 2 cut(s) | 640, 1706 |
| AcsI | RAATTY | 2 cut(s) | 417, 432 |
| AfaI | GTAC | 3 cut(s) | 651, 1494, 1810 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 394, 683, 734, 875, 1511, 1564, 1754 |
| AflIII | ACRYGT | 2 cut(s) | 300, 1143 |
| AgsI | TTSAA | 5 cut(s) | 104, 194, 280, 295, 1169 |
| AhlI | ACTAGT | 1 cut(s) | 119 |
| AjnI | CCWGG | 2 cut(s) | 676, 1317 |
| AluBI | AGCT | 7 cut(s) | 33, 190, 217, 269, 353, 631, 1609 |
| AluI | AGCT | 7 cut(s) | 33, 190, 217, 269, 353, 631, 1609 |
| Alw21I | GWGCWC | 2 cut(s) | 42, 1082 |
| AlwI | GGATC | 1 cut(s) | 161 |
| ApeKI | GCWGC | 6 cut(s) | 412, 424, 439, 1603, 1606, 1654 |
| ApoI | RAATTY | 2 cut(s) | 417, 432 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 135, 167 |
| AseI | ATTAAT | 1 cut(s) | 402 |
| AspLEI | GCGC | 2 cut(s) | 1510, 1705 |
| AspS9I | GGNCC | 9 cut(s) | 385, 704, 752, 761, 1315, 1342, 1369, 1414, 1757 |
| AsuC2I | CCSGG | 2 cut(s) | 765, 1512 |
| AsuHPI | GGTGA | 9 cut(s) | 481, 554, 676, 733, 787, 863, 968, 1151, 1436 |
| AvaII | GGWCC | 1 cut(s) | 385 |
| BalI | TGGCCA | 1 cut(s) | 642 |
| Bbv12I | GWGCWC | 2 cut(s) | 42, 1082 |
| BbvCI | CCTCAGC | 1 cut(s) | 522 |
| BbvI | GCAGC | 6 cut(s) | 424, 436, 451, 1615, 1618, 1666 |
| BceAI | ACGGC | 1 cut(s) | 1509 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1778, 1812 |
| BciT130I | CCWGG | 2 cut(s) | 678, 1319 |
| BcnI | CCSGG | 2 cut(s) | 765, 1512 |
| BcuI | ACTAGT | 1 cut(s) | 119 |
| BfaI | CTAG | 2 cut(s) | 120, 1668 |
| BfmI | CTRYAG | 1 cut(s) | 1488 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 760, 1396, 1530 |
| BisI | GCNGC | 9 cut(s) | 413, 425, 440, 796, 1417, 1604, 1607, 1655, 1706 |
| BlpI | GCTNAGC | 2 cut(s) | 270, 1070 |
| BlsI | GCNGC | 9 cut(s) | 414, 426, 441, 797, 1418, 1605, 1608, 1656, 1707 |
| Bme1390I | CCNGG | 4 cut(s) | 678, 765, 1319, 1512 |
| Bme18I | GGWCC | 1 cut(s) | 385 |
| BmgT120I | GGNCC | 9 cut(s) | 385, 704, 752, 761, 1315, 1342, 1369, 1414, 1757 |
| BmrFI | CCNGG | 4 cut(s) | 678, 765, 1319, 1512 |
| BmsI | GCATC | 6 cut(s) | 118, 465, 663, 714, 1297, 1624 |
| BpmI | CTGGAG | 1 cut(s) | 1595 |
| Bpu10I | CCTNAGC | 2 cut(s) | 465, 522 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 270, 1070 |
| BpuMI | CCSGG | 2 cut(s) | 765, 1512 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1287, 1683 |
| BsaJI | CCNNGG | 5 cut(s) | 637, 1417, 1511, 1525, 1558 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1069, 1099 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 394, 683, 734, 875, 1511, 1564, 1754 |
| Bse1I | ACTGG | 2 cut(s) | 289, 1083 |
| Bse3DI | GCAATG | 3 cut(s) | 1279, 1486, 1638 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1287, 1683 |
| BseBI | CCWGG | 2 cut(s) | 678, 1319 |
| BseDI | CCNNGG | 5 cut(s) | 637, 1417, 1511, 1525, 1558 |
| BseGI | GGATG | 4 cut(s) | 652, 777, 885, 1521 |
| BseJI | GATNNNNATC | 2 cut(s) | 1287, 1683 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 394, 683, 734, 875, 1511, 1564, 1754 |
| BseMI | GCAATG | 3 cut(s) | 1279, 1486, 1638 |
| BseMII | CTCAG | 4 cut(s) | 55, 284, 368, 513 |
| BseNI | ACTGG | 2 cut(s) | 289, 1083 |
| BseRI | GAGGAG | 5 cut(s) | 255, 539, 542, 638, 641 |
| BseXI | GCAGC | 6 cut(s) | 424, 436, 451, 1615, 1618, 1666 |
| BsgI | GTGCAG | 1 cut(s) | 113 |
| Bsh1236I | CGCG | 2 cut(s) | 1419, 1705 |
| BsiHKAI | GWGCWC | 2 cut(s) | 42, 1082 |
| BsiSI | CCGG | 2 cut(s) | 764, 1511 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 394, 683, 734, 875, 1511, 1564, 1754 |
| BsmI | GAATGC | 2 cut(s) | 790, 1576 |
| Bsp1286I | GDGCHC | 2 cut(s) | 42, 1082 |
| Bsp143I | GATC | 1 cut(s) | 166 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 270, 1070 |
| Bsp19I | CCATGG | 1 cut(s) | 637 |
| BspACI | CCGC | 8 cut(s) | 795, 822, 1322, 1417, 1419, 1533, 1547, 1705 |
| BspCNI | CTCAG | 4 cut(s) | 54, 283, 367, 514 |
| BspFNI | CGCG | 2 cut(s) | 1419, 1705 |
| BspHI | TCATGA | 2 cut(s) | 18, 1173 |
| BspMAI | CTGCAG | 1 cut(s) | 1492 |
| BspPI | GGATC | 1 cut(s) | 161 |
| BsrDI | GCAATG | 3 cut(s) | 1279, 1486, 1638 |
| BsrI | ACTGG | 2 cut(s) | 289, 1083 |
| BssECI | CCNNGG | 5 cut(s) | 637, 1417, 1511, 1525, 1558 |
| BssMI | GATC | 1 cut(s) | 166 |
| BssNAI | GTATAC | 1 cut(s) | 114 |
| BssT1I | CCWWGG | 2 cut(s) | 637, 1558 |
| Bst1107I | GTATAC | 1 cut(s) | 114 |
| Bst2UI | CCWGG | 2 cut(s) | 678, 1319 |
| Bst4CI | ACNGT | 2 cut(s) | 59, 151 |
| Bst6I | CTCTTC | 1 cut(s) | 615 |
| BstC8I | GCNNGC | 4 cut(s) | 519, 1488, 1506, 1549 |
| BstDEI | CTNAG | 6 cut(s) | 41, 270, 354, 465, 522, 1070 |
| BstDSI | CCRYGG | 3 cut(s) | 637, 1417, 1525 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 873 |
| BstF5I | GGATG | 4 cut(s) | 652, 777, 885, 1521 |
| BstFNI | CGCG | 2 cut(s) | 1419, 1705 |
| BstHHI | GCGC | 2 cut(s) | 1510, 1705 |
| BstKTI | GATC | 1 cut(s) | 169 |
| BstMBI | GATC | 1 cut(s) | 166 |
| BstNI | CCWGG | 2 cut(s) | 678, 1319 |
| BstNSI | RCATGY | 4 cut(s) | 212, 304, 1147, 1732 |
| BstSCI | CCNGG | 4 cut(s) | 676, 763, 1317, 1510 |
| BstSFI | CTRYAG | 1 cut(s) | 1488 |
| BstUI | CGCG | 2 cut(s) | 1419, 1705 |
| BstV1I | GCAGC | 6 cut(s) | 424, 436, 451, 1615, 1618, 1666 |
| BstX2I | RGATCY | 1 cut(s) | 166 |
| BstYI | RGATCY | 1 cut(s) | 166 |
| BstZ17I | GTATAC | 1 cut(s) | 114 |
| BtgI | CCRYGG | 3 cut(s) | 637, 1417, 1525 |
| BtgZI | GCGATG | 1 cut(s) | 1803 |
| BtsCI | GGATG | 4 cut(s) | 652, 777, 885, 1521 |
| BtsIMutI | CAGTG | 1 cut(s) | 55 |
| Cac8I | GCNNGC | 4 cut(s) | 519, 1488, 1506, 1549 |
| CciI | TCATGA | 2 cut(s) | 18, 1173 |
| CfoI | GCGC | 2 cut(s) | 1510, 1705 |
| Cfr13I | GGNCC | 9 cut(s) | 385, 704, 752, 761, 1315, 1342, 1369, 1414, 1757 |
| Cfr42I | CCGCGG | 1 cut(s) | 1420 |
| Csp6I | GTAC | 3 cut(s) | 650, 1493, 1809 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1246, 1281 |
| CviQI | GTAC | 3 cut(s) | 650, 1493, 1809 |
| DdeI | CTNAG | 6 cut(s) | 41, 270, 354, 465, 522, 1070 |
| DpnI | GATC | 1 cut(s) | 168 |
| DpnII | GATC | 1 cut(s) | 166 |
| EaeI | YGGCCR | 2 cut(s) | 640, 1706 |
| Eam1104I | CTCTTC | 1 cut(s) | 615 |
| EarI | CTCTTC | 1 cut(s) | 615 |
| Eco130I | CCWWGG | 2 cut(s) | 637, 1558 |
| Eco147I | AGGCCT | 1 cut(s) | 1390 |
| Eco47I | GGWCC | 1 cut(s) | 385 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 873 |
| EcoO109I | RGGNCCY | 1 cut(s) | 704 |
| EcoRII | CCWGG | 2 cut(s) | 676, 1317 |
| EcoT14I | CCWWGG | 2 cut(s) | 637, 1558 |
| ErhI | CCWWGG | 2 cut(s) | 637, 1558 |
| FauI | CCCGC | 2 cut(s) | 1315, 1540 |
| FauNDI | CATATG | 3 cut(s) | 1311, 1338, 1719 |
| FblI | GTMKAC | 1 cut(s) | 113 |
| Fnu4HI | GCNGC | 9 cut(s) | 413, 425, 440, 796, 1417, 1604, 1607, 1655, 1706 |
| FokI | GGATG | 4 cut(s) | 639, 784, 892, 1528 |
| Fsp4HI | GCNGC | 9 cut(s) | 413, 425, 440, 796, 1417, 1604, 1607, 1655, 1706 |
| FspBI | CTAG | 2 cut(s) | 120, 1668 |
| GlaI | GCGC | 2 cut(s) | 1509, 1704 |
| GluI | GCNGC | 9 cut(s) | 413, 425, 440, 796, 1417, 1604, 1607, 1655, 1706 |
| GsuI | CTGGAG | 1 cut(s) | 1595 |
| HapII | CCGG | 2 cut(s) | 764, 1511 |
| HhaI | GCGC | 2 cut(s) | 1510, 1705 |
| Hin6I | GCGC | 2 cut(s) | 1508, 1703 |
| HinP1I | GCGC | 2 cut(s) | 1508, 1703 |
| HindIII | AAGCTT | 1 cut(s) | 188 |
| HinfI | GANTC | 2 cut(s) | 25, 313 |
| HpaII | CCGG | 2 cut(s) | 764, 1511 |
| HphI | GGTGA | 9 cut(s) | 481, 554, 676, 733, 787, 863, 968, 1151, 1436 |
| Hpy166II | GTNNAC | 2 cut(s) | 49, 114 |
| Hpy188I | TCNGA | 6 cut(s) | 30, 44, 357, 1329, 1440, 1473 |
| Hpy188III | TCNNGA | 4 cut(s) | 19, 184, 295, 1174 |
| Hpy8I | GTNNAC | 2 cut(s) | 49, 114 |
| HpyCH4III | ACNGT | 2 cut(s) | 59, 151 |
| HpyCH4IV | ACGT | 1 cut(s) | 162 |
| HpyCH4V | TGCA | 8 cut(s) | 94, 131, 212, 689, 874, 1288, 1490, 1574 |
| HpyF3I | CTNAG | 6 cut(s) | 41, 270, 354, 465, 522, 1070 |
| HpySE526I | ACGT | 1 cut(s) | 162 |
| HspAI | GCGC | 2 cut(s) | 1508, 1703 |
| KspI | CCGCGG | 1 cut(s) | 1420 |
| Kzo9I | GATC | 1 cut(s) | 166 |
| LmnI | GCTCC | 4 cut(s) | 487, 628, 1077, 1614 |
| Lsp1109I | GCAGC | 6 cut(s) | 424, 436, 451, 1615, 1618, 1666 |
| LweI | GCATC | 6 cut(s) | 118, 465, 663, 714, 1297, 1624 |
| MaeI | CTAG | 2 cut(s) | 120, 1668 |
| MaeII | ACGT | 1 cut(s) | 162 |
| MaeIII | GTNAC | 5 cut(s) | 145, 151, 341, 1139, 1445 |
| MalI | GATC | 1 cut(s) | 168 |
| MboI | GATC | 1 cut(s) | 166 |
| MboII | GAAGA | 4 cut(s) | 34, 581, 611, 632 |
| MflI | RGATCY | 1 cut(s) | 166 |
| MhlI | GDGCHC | 2 cut(s) | 42, 1082 |
| MlsI | TGGCCA | 1 cut(s) | 642 |
| MluCI | AATT | 7 cut(s) | 86, 99, 256, 417, 432, 1164, 1177 |
| MluNI | TGGCCA | 1 cut(s) | 642 |
| Mox20I | TGGCCA | 1 cut(s) | 642 |
| MscI | TGGCCA | 1 cut(s) | 642 |
| MseI | TTAA | 4 cut(s) | 81, 402, 510, 633 |
| MslI | CAYNNNNRTG | 1 cut(s) | 305 |
| Msp20I | TGGCCA | 1 cut(s) | 642 |
| MspA1I | CMGCKG | 1 cut(s) | 1419 |
| MspI | CCGG | 2 cut(s) | 764, 1511 |
| MspR9I | CCNGG | 4 cut(s) | 678, 765, 1319, 1512 |
| Mva1269I | GAATGC | 2 cut(s) | 790, 1576 |
| MvaI | CCWGG | 2 cut(s) | 678, 1319 |
| MvnI | CGCG | 2 cut(s) | 1419, 1705 |
| NciI | CCSGG | 2 cut(s) | 765, 1512 |
| NcoI | CCATGG | 1 cut(s) | 637 |
| NdeI | CATATG | 3 cut(s) | 1311, 1338, 1719 |
| NdeII | GATC | 1 cut(s) | 166 |
| NmuCI | GTSAC | 3 cut(s) | 145, 151, 1139 |
| NspI | RCATGY | 4 cut(s) | 212, 304, 1147, 1732 |
| PagI | TCATGA | 2 cut(s) | 18, 1173 |
| PceI | AGGCCT | 1 cut(s) | 1390 |
| PciI | ACATGT | 2 cut(s) | 300, 1143 |
| PctI | GAATGC | 2 cut(s) | 790, 1576 |
| PfeI | GAWTC | 2 cut(s) | 25, 313 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1564 |
| PkrI | GCNGC | 9 cut(s) | 414, 426, 441, 797, 1418, 1605, 1608, 1656, 1707 |
| PscI | ACATGT | 2 cut(s) | 300, 1143 |
| PshBI | ATTAAT | 1 cut(s) | 402 |
| Psp6I | CCWGG | 2 cut(s) | 676, 1317 |
| PspGI | CCWGG | 2 cut(s) | 676, 1317 |
| PspPI | GGNCC | 9 cut(s) | 385, 704, 752, 761, 1315, 1342, 1369, 1414, 1757 |
| PstI | CTGCAG | 1 cut(s) | 1492 |
| PsuI | RGATCY | 1 cut(s) | 166 |
| RsaI | GTAC | 3 cut(s) | 651, 1494, 1810 |
| RsaNI | GTAC | 3 cut(s) | 650, 1493, 1809 |
| RseI | CAYNNNNRTG | 1 cut(s) | 305 |
| SacII | CCGCGG | 1 cut(s) | 1420 |
| SaqAI | TTAA | 4 cut(s) | 81, 402, 510, 633 |
| SatI | GCNGC | 9 cut(s) | 413, 425, 440, 796, 1417, 1604, 1607, 1655, 1706 |
| Sau3AI | GATC | 1 cut(s) | 166 |
| Sau96I | GGNCC | 9 cut(s) | 385, 704, 752, 761, 1315, 1342, 1369, 1414, 1757 |
| ScrFI | CCNGG | 4 cut(s) | 678, 765, 1319, 1512 |
| SduI | GDGCHC | 2 cut(s) | 42, 1082 |
| SfaNI | GCATC | 6 cut(s) | 118, 465, 663, 714, 1297, 1624 |
| SfcI | CTRYAG | 1 cut(s) | 1488 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 760 |
| Sfr303I | CCGCGG | 1 cut(s) | 1420 |
| SgrBI | CCGCGG | 1 cut(s) | 1420 |
| SinI | GGWCC | 1 cut(s) | 385 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 305 |
| SpeI | ACTAGT | 1 cut(s) | 119 |
| Sse9I | AATT | 7 cut(s) | 86, 99, 256, 417, 432, 1164, 1177 |
| SseBI | AGGCCT | 1 cut(s) | 1390 |
| SsiI | CCGC | 8 cut(s) | 795, 822, 1322, 1417, 1419, 1533, 1547, 1705 |
| SspMI | CTAG | 2 cut(s) | 120, 1668 |
| StuI | AGGCCT | 1 cut(s) | 1390 |
| StyD4I | CCNGG | 4 cut(s) | 676, 763, 1317, 1510 |
| StyI | CCWWGG | 2 cut(s) | 637, 1558 |
| TaaI | ACNGT | 2 cut(s) | 59, 151 |
| TaiI | ACGT | 1 cut(s) | 165 |
| TasI | AATT | 7 cut(s) | 86, 99, 256, 417, 432, 1164, 1177 |
| TatI | WGTACW | 1 cut(s) | 1492 |
| TauI | GCSGC | 3 cut(s) | 798, 1419, 1708 |
| TfiI | GAWTC | 2 cut(s) | 25, 313 |
| Tru1I | TTAA | 4 cut(s) | 81, 402, 510, 633 |
| Tru9I | TTAA | 4 cut(s) | 81, 402, 510, 633 |
| TscAI | CASTG | 1 cut(s) | 62 |
| TseFI | GTSAC | 3 cut(s) | 145, 151, 1139 |
| TseI | GCWGC | 6 cut(s) | 412, 424, 439, 1603, 1606, 1654 |
| Tsp45I | GTSAC | 3 cut(s) | 145, 151, 1139 |
| TspRI | CASTG | 1 cut(s) | 62 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1564 |
| VpaK11BI | GGWCC | 1 cut(s) | 385 |
| VspI | ATTAAT | 1 cut(s) | 402 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 873 |
| XapI | RAATTY | 2 cut(s) | 417, 432 |
| XceI | RCATGY | 4 cut(s) | 212, 304, 1147, 1732 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1667 |
| XmiI | GTMKAC | 1 cut(s) | 113 |
| XspI | CTAG | 2 cut(s) | 120, 1668 |