Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006763

Physical Location & Seq

Genomic Coordinates Forward (+)

11747866 .. 11754761

Gene Structure 6896 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g17910.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3303 bp

ATGGACATGGAGCGCAGGCCGTTCAACAGATCGAACGAACCAGGCTTGAAGAAGGCGAGACTGAACGACGACCAAGGCGTCGTGAATCCGAATCTGAACGGCCGAGGAGGGTTTGGACAGAGGCCTGGCGGAGCTAATCCGGTGCTTTCGAGGTTCAGAGTGACTGATAGAGAGTCGGAGAGCAATGACCTCCGCGGCGGCGGAGCCTATGTCCCTCAGCCATTGCAGCACCACCAGGAGCTTGTGAGCCAGTACCGGACGGCGCTGGCGGAGTTGACCTTCAATTCGAAGCCTATCATCACCAATTTGACCATCATCGCCGGGGAGAGCCAAAACGCGGCCAAGGCTATCACTGCGACTATTTGCGCCAACATTATTGAGGTTCCTAGTGAGCAGAAGTTACCATCACTTTATCTTTTGGACAGTATTGTAAAAAATATCGGACGGGATTACATAAAACACTTTGCCGCCAGGCTACCTGAGGTATTCTGCAAGGCATATAGACAGGTTGAACCTCCTATACATCAAAGCATGCGCCATCTTTTTGGAACTTGGAAAGGTGTCTTCCCTGCCCAGACACTTCAGATGATTGAAAAAGAACTTGGGTTTACTACTGCAGCAAATGGTTCGTCCTCTGGAGTTTCATCATCTAGACCAGACTCACAGTCACAACGTCCAGCAAATAGCATTCATGTGAACCCCAAATACTTGGAAAGGCAGCGTCTTCAGCAACCAGTGAGGACAAAAGGGATGGCTAGTGACTTTGATGGGACTATGACAAACTCGATTGACGATATAGAGAGGTCGGACAGAGTAGCAAGCATCAGTGCTGGACGATCATGGGCTGATCCTCCTGTTAAAATGCCTAATATTCAGCGTTCAACTAGAGATGCACTAAGTGAGCGTTTTCATGAGAAGAATGTTGGTGGCGAATATGATGAATCTGATTATGATTCTGATCTTCCTAGGAGTTCAAGCTTGGCCATTGGGCGATCTGGTGGGAATATTATCGAGCAAGGACATGATAAACCTTGGTATGGAGGTGTCAGCAGTGCTGCCGAAACAATTTCCGGCCAGAGAAATGGTTTTAACAAGAAGCATGGATTAAATTACTCAGCACCTAAATCTGCAAATGCTGATCCTCGTCTACAGACACCACAAGCCATTGCAAGTAGAAATAGGGGTGGGTTGTCCAGTAGTTGGAAGAATTCTGAGGAAGAGGAATACATGTGGGATGATATGAACTCAAGATTGACAGATCATGTAACCCCTGATCTTTCTAGTAACTCAAGAAAAGAGCGCTGGATTTCTGACGATTCAGAGAAAATGGGGTTTGGAGGTGGCTCTCGTAAACTGAAAAGAGTTAATGATCTGGACATGGATACTGATATTGTTGAACAGAAAGACATATCTGCTCTTGGGCACCGTATGCCATCACCTTGGTCTTTGCAAGAATCGCATGTTGTGGATCGGCTGACCTCTTCCGGTACTCCTGTCATGAATTCAGCTCATTCAGAGCGTTATGTTTCAAGTTTAAGTGGGTTATCAACAAGTGGAGATTCTTCGGTGGCGAGGTTGGGAAATAGAGCACAGATGATGTCTTCTCATGTTGGGGCCTCAAGCTTTGGGTTGCCGACAAATGCTGCATCAGGGTCTAATGGAGCTGTAGGGAAACAGCAACAGATTCAGTCTGTGAGGGCTGCATCACCATCTGGACAGTTACTGATGCACCAGCATGCTCCCTTACCTGCATCAAAAATACAGAATCCCCGTCATTATTTGGCTGAGCAAGACCCTGCTCAAGCTCCATCCCTTCCTCCTGACTTGAAAGTATCTCAAATTTTGGGAAAGTCGGACTCAGGGTTACATAGCCAGTATACCGAGGACTCTTTACCTATTCCAACTTCCAATCTCCGATTAGGTGGCATGGCAAAGTCACAGCCCCAAGAATTGAAGGCTTTGTCTTCGTCAATGGCTGCCATCCAATCAAAGCACCACTATCCCTTCCAACAACAAGACATTACAGAGCCTGAATCCTCGGATCAGACTGAGAAGCCCCATAAAATGCCCTCAACAGTCAGAAATTCTATATCAGATCTTTCTAATCTCCTTGCTGCAGAAACTTCAGGACAGTCAAGCACAAGTAGTTTGTTGGCCGCTGTTTTGAAGACCGGAATTCTCTCTAACAAATCAATTACTGGTAGCCTTCCCAGTTCCAGTTTTGGTGACATGGAAAAAATGCCACCACAGTCAGTTAGTCAACCACCCTTGCCAATTGGACGGCCACCTACCAAAGCTGCACTTCCAGGGTTGAAGGTTGCACCAGCACCTTCATTGGGTCATCCTTCCCGTGATAACTCGCCAACCACCTCAAGCACTCTGCAGAAGGTTGGACATCCACCTCTTCCACCTGGCCAACCACCTTTGTCACAAGAGGGTGGTTCAACGGCAAAAGATTCAAATGCCAAGGATCCAATATCAAACCTTTTAAGCTCTTTAGTTGCCAAAGGGTTGATATCTGCATCAAAGTCGGAGTCAACTACACCTCTGCCATCTCATAAGCCGACAGAAGTGCAAATTCAGAAACTACCCACGACTACCGTTAGCTCTATCTCTCCGGGTTCAGCATCATCAATAGTTCCTGGTTCATCTCGAAGGGATAATGCACCTCTCGCAGAACAGGTGGTCAAACCTTCTGCTGCATTGGCTCAATCTACTAAGACGGAAAAAAAGAACCCGATAGGATTTGAGTTTAAGCCAGATAAAATCCGAGAGTTACATCCATCTGTCATCGATGAGCTTTTTGACGACCTTCAACATAAATGTATCCTATGTGGACTCAGGCTCAAACTTAAAGAACGTCTTGATAGGCACTTGGAATGGCATGCTTTGAAAACTCCTGAAGCAGATGGTTCAATTAAGGCATCAAGGGGGTGGTATGCAAATTCAGCCAATTGGGTTACTGGAAAGGCAGGAAGTTCTTCTGACCTTGACTCCAACAATTCAAATGACATGACTGGCATGACAGTGGCCAGTAATGAGCCTACGGTTCCAGCTGATGAAAGCCAGTGTGCATGTATTATATGTGGCAATACTTTTGAAGACTTCTATTGTCAAGAAAGTGATGACTGGATGTTCAAAGGAGCTGTGTATATGACTGTTCCAGCTGGGGATGGTGAACTTGGAACTGCAGGGGGAAGCGTTCTGAAGGGTCCCATTGTGCATGCAACTTGTATTGATGAAAATTCACTTGAGGAATTGGGACTGGCTGCTACACGAGTTAAATTGGAAAAGGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0000993 GO:0001098 GO:0001099 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0005849 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0019899 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0046483 GO:0070013 GO:0070063 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03015 ko04016 ko04075 map03015 map04016 map04075

Pfam Domains

Protein Families

CTD_bind

Protein Analysis

1101

Amino Acids

118.58

Weight (kDa)

6.77

Isoelectric Point (pI)

58.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CID	PF04818	87 - 195	2.4e-13	CID domain
zf_PCFS4	PF23228	1012 - 1081	3.4e-29	PCFS4 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36480 AT2G36480
fragaria_vesca	FvH4_6g17910 FvH4_6g17910
malus_domestica	MD12G1018100.v1.1 MD14G1016100.v1.1
prunus_persica	Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1
pyrus_communis	pycom12g01510 pycom14g01390
rosa_chinensis	RchiOBHm_Chr3g0472161
rosa_laevigata	RLG00000024100
rosa_multiflora	Rmu_sc0002532.1_g000029 Rmu_sc0019091.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409180
rosa_rugosa	Rorug03G0122700
rosa_samantha	Rh3AG174700 Rh3BG200000 Rh3CG191200 Rh3CG198500 Rh3DG174500
rosa_wichuraiana	Rw3G016630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	77
Acc36I	ACCTGC	1 cut(s)	1756
AccB1I	GGYRCC	1 cut(s)	1422
AccB7I	CCANNNNNTGG	1 cut(s)	1200
AccI	GTMKAC	2 cut(s)	1147, 1877
AccII	CGCG	2 cut(s)	195, 338
AciI	CCGC	9 cut(s)	129, 193, 195, 198, 201, 269, 338, 468, 2157
AclWI	GGATC	6 cut(s)	842, 1133, 1476, 2049, 2465, 2478
AcoI	YGGCCR	8 cut(s)	100, 339, 981, 1072, 2154, 2282, 2413, 3030
AcsI	RAATTY	8 cut(s)	1207, 1501, 1839, 2083, 2175, 2577, 2944, 3244
AcuI	CTGAAG	5 cut(s)	566, 710, 2109, 2922, 3227
AcyI	GRCGYC	1 cut(s)	78
AdeI	CACNNNGTG	1 cut(s)	899
AfaI	GTAC	2 cut(s)	254, 1489
AfeI	AGCGCT	1 cut(s)	1301
AfiI	CCNNNNNNNGG	4 cut(s)	337, 1037, 1200, 2336
AflIII	ACRYGT	1 cut(s)	1227
AhdI	GACNNNNNGTC	1 cut(s)	664
AjnI	CCWGG	7 cut(s)	40, 124, 234, 470, 2305, 2410, 2641
AjuI	GAANNNNNNNTTGG	2 cut(s)	585, 617
Alw21I	GWGCWC	1 cut(s)	1591
Alw26I	GTCTC	1 cut(s)	52
AlwI	GGATC	6 cut(s)	842, 1133, 1476, 2049, 2465, 2478
AlwNI	CAGNNNCTG	2 cut(s)	1723, 2030
Aor51HI	AGCGCT	1 cut(s)	1301
ApoI	RAATTY	8 cut(s)	1207, 1501, 1839, 2083, 2175, 2577, 2944, 3244
ArsI	GACNNNNNNTTYG	6 cut(s)	268, 300, 614, 646, 2519, 2551
Asp700I	GAANNNNTTC	1 cut(s)	2980
AspA2I	CCTAGG	1 cut(s)	965
AspLEI	GCGC	5 cut(s)	15, 265, 368, 537, 1302
AspS9I	GGNCC	2 cut(s)	1614, 3212
AsuC2I	CCSGG	2 cut(s)	322, 2619
AsuHPI	GGTGA	5 cut(s)	292, 1428, 1698, 2237, 3188
AsuII	TTCGAA	1 cut(s)	287
AvaII	GGWCC	1 cut(s)	3212
AvrII	CCTAGG	1 cut(s)	965
AxyI	CCTNAGG	1 cut(s)	480
BaeGI	GKGCMC	1 cut(s)	1425
BaeI	ACNNNNGTAYC	2 cut(s)	1479, 1512
BalI	TGGCCA	3 cut(s)	983, 2415, 3032
BamHI	GGATCC	1 cut(s)	2470
BanI	GGYRCC	1 cut(s)	1422
BauI	CACGAG	1 cut(s)	3276
BbsI	GAAGAC	6 cut(s)	556, 716, 1593, 1956, 2174, 3108
Bbv12I	GWGCWC	1 cut(s)	1591
BbvCI	CCTCAGC	1 cut(s)	216
BceAI	ACGGC	5 cut(s)	4, 115, 276, 2297, 2463
BcgI	CGANNNNNNTGC	6 cut(s)	609, 643, 2511, 2545, 2554, 2588
BciT130I	CCWGG	7 cut(s)	42, 126, 236, 472, 2307, 2412, 2643
BciVI	GTATCC	2 cut(s)	1375, 2837
BcnI	CCSGG	2 cut(s)	322, 2619
BcoDI	GTCTC	1 cut(s)	52
BfaI	CTAG	6 cut(s)	387, 651, 756, 885, 966, 1281
BfmI	CTRYAG	6 cut(s)	615, 1148, 1665, 2115, 2381, 3189
BfoI	RGCGCY	2 cut(s)	266, 1303
BfuAI	ACCTGC	1 cut(s)	1756
BfuI	GTATCC	2 cut(s)	1375, 2837
BglII	AGATCT	1 cut(s)	2095
BlnI	CCTAGG	1 cut(s)	965
BlpI	GCTNAGC	1 cut(s)	1785
Bme1390I	CCNGG	9 cut(s)	42, 126, 236, 322, 472, 2307, 2412, 2619, 2643
Bme18I	GGWCC	1 cut(s)	3212
BmeRI	GACNNNNNGTC	1 cut(s)	664
BmgT120I	GGNCC	2 cut(s)	1614, 3212
BmiI	GGNNCC	8 cut(s)	205, 384, 1424, 1615, 2472, 3051, 3213, 3214
BmrFI	CCNGG	9 cut(s)	42, 126, 236, 322, 472, 2307, 2412, 2619, 2643
BmrI	ACTGGG	1 cut(s)	2205
BmsI	GCATC	9 cut(s)	831, 880, 1655, 1712, 1716, 1760, 2531, 2636, 2933
BmuI	ACTGGG	1 cut(s)	2205
BpiI	GAAGAC	6 cut(s)	556, 716, 1593, 1956, 2174, 3108
BpmI	CTGGAG	1 cut(s)	657
Bpu10I	CCTNAGC	1 cut(s)	216
Bpu1102I	GCTNAGC	1 cut(s)	1785
Bpu14I	TTCGAA	1 cut(s)	287
BpuEI	CTTGAG	6 cut(s)	1231, 1273, 1603, 1785, 2356, 3272
BpuMI	CCSGG	2 cut(s)	322, 2619
Bsa29I	ATCGAT	1 cut(s)	2793
BsaBI	GATNNNNATC	1 cut(s)	957
BsaHI	GRCGYC	1 cut(s)	78
BsaWI	WCCGGW	4 cut(s)	139, 255, 1484, 2171
BsaXI	ACNNNNNCTCC	4 cut(s)	195, 225, 2978, 3008
Bsc4I	CCNNNNNNNGG	4 cut(s)	337, 1037, 1200, 2336
Bse21I	CCTNAGG	1 cut(s)	480
Bse3DI	GCAATG	3 cut(s)	190, 221, 1164
Bse8I	GATNNNNATC	1 cut(s)	957
BseBI	CCWGG	7 cut(s)	42, 126, 236, 472, 2307, 2412, 2643
BseCI	ATCGAT	1 cut(s)	2793
BseJI	GATNNNNATC	1 cut(s)	957
BseLI	CCNNNNNNNGG	4 cut(s)	337, 1037, 1200, 2336
BseMI	GCAATG	3 cut(s)	190, 221, 1164
BseMII	CTCAG	8 cut(s)	230, 471, 1128, 1203, 1776, 1872, 2040, 2854
BseRI	GAGGAG	1 cut(s)	120
BseSI	GKGCMC	1 cut(s)	1425
BseX3I	CGGCCG	1 cut(s)	100
BseYI	CCCAGC	1 cut(s)	3167
BsgI	GTGCAG	1 cut(s)	2283
Bsh1236I	CGCG	2 cut(s)	195, 338
Bsh1285I	CGRYCG	1 cut(s)	103
BshNI	GGYRCC	1 cut(s)	1422
BshVI	ATCGAT	1 cut(s)	2793
BsiEI	CGRYCG	1 cut(s)	103
BsiHKAI	GWGCWC	1 cut(s)	1591
BsiSI	CCGG	7 cut(s)	140, 256, 321, 1071, 1485, 2172, 2618
BslFI	GGGAC	4 cut(s)	197, 784, 3198, 3276
BslI	CCNNNNNNNGG	4 cut(s)	337, 1037, 1200, 2336
BsmAI	GTCTC	1 cut(s)	52
BsmFI	GGGAC	4 cut(s)	197, 784, 3198, 3276
BsmI	GAATGC	1 cut(s)	687
Bsp119I	TTCGAA	1 cut(s)	287
Bsp1286I	GDGCHC	2 cut(s)	1425, 1591
Bsp1720I	GCTNAGC	1 cut(s)	1785
BspACI	CCGC	9 cut(s)	129, 193, 195, 198, 201, 269, 338, 468, 2157
BspCNI	CTCAG	8 cut(s)	229, 472, 1127, 1204, 1777, 1871, 2041, 2853
BspDI	ATCGAT	1 cut(s)	2793
BspFNI	CGCG	2 cut(s)	195, 338
BspHI	TCATGA	2 cut(s)	910, 1497
BspLI	GGNNCC	8 cut(s)	205, 384, 1424, 1615, 2472, 3051, 3213, 3214
BspMAI	CTGCAG	4 cut(s)	619, 2119, 2385, 3193
BspMI	ACCTGC	1 cut(s)	1756
BspPI	GGATC	6 cut(s)	842, 1133, 1476, 2049, 2465, 2478
BspT104I	TTCGAA	1 cut(s)	287
BspT107I	GGYRCC	1 cut(s)	1422
BsrDI	GCAATG	3 cut(s)	190, 221, 1164
BssNAI	GTATAC	1 cut(s)	1878
BssNI	GRCGYC	1 cut(s)	78
BssSI	CACGAG	1 cut(s)	3276
BssT1I	CCWWGG	6 cut(s)	73, 342, 965, 1031, 1439, 2466
Bst1107I	GTATAC	1 cut(s)	1878
Bst2BI	CACGAG	1 cut(s)	3276
Bst2UI	CCWGG	7 cut(s)	42, 126, 236, 472, 2307, 2412, 2643
Bst6I	CTCTTC	3 cut(s)	1212, 1486, 2409
BstACI	GRCGYC	1 cut(s)	78
BstAPI	GCANNNNNTGC	1 cut(s)	1429
BstBI	TTCGAA	1 cut(s)	287
BstC8I	GCNNGC	7 cut(s)	17, 267, 533, 820, 1737, 2886, 3225
BstDSI	CCRYGG	1 cut(s)	193
BstFNI	CGCG	2 cut(s)	195, 338
BstH2I	RGCGCY	2 cut(s)	266, 1303
BstHHI	GCGC	5 cut(s)	15, 265, 368, 537, 1302
BstMAI	GTCTC	1 cut(s)	52
BstMCI	CGRYCG	1 cut(s)	103
BstMWI	GCNNNNNNNGC	9 cut(s)	226, 344, 353, 727, 1429, 1456, 2672, 2705, 2948
BstNI	CCWGG	7 cut(s)	42, 126, 236, 472, 2307, 2412, 2643
BstNSI	RCATGY	7 cut(s)	535, 1231, 1463, 1739, 2888, 3078, 3227
BstSCI	CCNGG	9 cut(s)	40, 124, 234, 320, 470, 2305, 2410, 2617, 2641
BstSFI	CTRYAG	6 cut(s)	615, 1148, 1665, 2115, 2381, 3189
BstSLI	GKGCMC	1 cut(s)	1425
BstUI	CGCG	2 cut(s)	195, 338
BstV2I	GAAGAC	6 cut(s)	556, 716, 1593, 1956, 2174, 3108
BstX2I	RGATCY	2 cut(s)	2095, 2470
BstXI	CCANNNNNNTGG	4 cut(s)	545, 709, 1082, 1440
BstYI	RGATCY	2 cut(s)	2095, 2470
BstZ17I	GTATAC	1 cut(s)	1878
BstZI	CGGCCG	1 cut(s)	100
Bsu15I	ATCGAT	1 cut(s)	2793
Bsu36I	CCTNAGG	1 cut(s)	480
BsuI	GTATCC	2 cut(s)	1375, 2837
BsuTUI	ATCGAT	1 cut(s)	2793
BtgI	CCRYGG	1 cut(s)	193
BtgZI	GCGATG	1 cut(s)	301
BtsI	GCAGTG	2 cut(s)	351, 1057
BtsIMutI	CAGTG	6 cut(s)	351, 741, 832, 1057, 3033, 3074
BveI	ACCTGC	1 cut(s)	1756
Cac8I	GCNNGC	7 cut(s)	17, 267, 533, 820, 1737, 2886, 3225
CaiI	CAGNNNCTG	2 cut(s)	1723, 2030
CciI	TCATGA	2 cut(s)	910, 1497
CfoI	GCGC	5 cut(s)	15, 265, 368, 537, 1302
Cfr13I	GGNCC	2 cut(s)	1614, 3212
Cfr42I	CCGCGG	1 cut(s)	196
ClaI	ATCGAT	1 cut(s)	2793
CseI	GACGC	2 cut(s)	67, 710
Csp6I	GTAC	2 cut(s)	253, 1488
CviQI	GTAC	2 cut(s)	253, 1488
DraIII	CACNNNGTG	1 cut(s)	899
DrdI	GACNNNNNNGTC	1 cut(s)	77
DriI	GACNNNNNGTC	1 cut(s)	664
DseDI	GACNNNNNNGTC	1 cut(s)	77
EaeI	YGGCCR	8 cut(s)	100, 339, 981, 1072, 2154, 2282, 2413, 3030
EagI	CGGCCG	1 cut(s)	100
Eam1104I	CTCTTC	3 cut(s)	1212, 1486, 2409
Eam1105I	GACNNNNNGTC	1 cut(s)	664
EarI	CTCTTC	3 cut(s)	1212, 1486, 2409
EciI	GGCGGA	3 cut(s)	144, 216, 284
EclXI	CGGCCG	1 cut(s)	100
Eco130I	CCWWGG	6 cut(s)	73, 342, 965, 1031, 1439, 2466
Eco147I	AGGCCT	1 cut(s)	124
Eco32I	GATATC	1 cut(s)	2517
Eco47I	GGWCC	1 cut(s)	3212
Eco47III	AGCGCT	1 cut(s)	1301
Eco52I	CGGCCG	1 cut(s)	100
Eco57I	CTGAAG	5 cut(s)	566, 710, 2109, 2922, 3227
Eco81I	CCTNAGG	1 cut(s)	480
EcoO109I	RGGNCCY	2 cut(s)	1614, 3212
EcoRI	GAATTC	3 cut(s)	1207, 1501, 2175
EcoRII	CCWGG	7 cut(s)	40, 124, 234, 470, 2305, 2410, 2641
EcoRV	GATATC	1 cut(s)	2517
EcoT14I	CCWWGG	6 cut(s)	73, 342, 965, 1031, 1439, 2466
ErhI	CCWWGG	6 cut(s)	73, 342, 965, 1031, 1439, 2466
FalI	AAGNNNNNCTT	4 cut(s)	2286, 2318, 2847, 2879
FaqI	GGGAC	4 cut(s)	197, 784, 3198, 3276
FblI	GTMKAC	2 cut(s)	1147, 1877
FokI	GGATG	9 cut(s)	763, 1247, 1795, 1967, 2328, 2382, 2766, 3145, 3185
FspBI	CTAG	6 cut(s)	387, 651, 756, 885, 966, 1281
GlaI	GCGC	5 cut(s)	14, 264, 367, 536, 1301
GsaI	CCCAGC	1 cut(s)	3171
GsuI	CTGGAG	1 cut(s)	657
HaeII	RGCGCY	2 cut(s)	266, 1303
HapII	CCGG	7 cut(s)	140, 256, 321, 1071, 1485, 2172, 2618
HgaI	GACGC	2 cut(s)	67, 710
HhaI	GCGC	5 cut(s)	15, 265, 368, 537, 1302
Hin1I	GRCGYC	1 cut(s)	78
Hin6I	GCGC	5 cut(s)	13, 263, 366, 535, 1300
HinP1I	GCGC	5 cut(s)	13, 263, 366, 535, 1300
HincII	GTYRAC	3 cut(s)	276, 2261, 2538
HindII	GTYRAC	3 cut(s)	276, 2261, 2538
HindIII	AAGCTT	2 cut(s)	976, 1621
HpaII	CCGG	7 cut(s)	140, 256, 321, 1071, 1485, 2172, 2618
HphI	GGTGA	5 cut(s)	292, 1428, 1698, 2237, 3188
Hpy99I	CGWCG	2 cut(s)	71, 83
HpyCH4IV	ACGT	2 cut(s)	673, 2860
HpyF10VI	GCNNNNNNNGC	9 cut(s)	226, 344, 353, 727, 1429, 1456, 2672, 2705, 2948
HpySE526I	ACGT	2 cut(s)	673, 2860
Hsp92I	GRCGYC	1 cut(s)	78
HspAI	GCGC	5 cut(s)	13, 263, 366, 535, 1300
KflI	GGGWCCC	1 cut(s)	3212
KspI	CCGCGG	1 cut(s)	196
LmnI	GCTCC	8 cut(s)	10, 131, 203, 238, 1661, 1744, 1810, 3143
LweI	GCATC	9 cut(s)	831, 880, 1655, 1712, 1716, 1760, 2531, 2636, 2933
MaeI	CTAG	6 cut(s)	387, 651, 756, 885, 966, 1281
MaeII	ACGT	2 cut(s)	673, 2860
MfeI	CAATTG	2 cut(s)	2274, 2953
MflI	RGATCY	2 cut(s)	2095, 2470
MhlI	GDGCHC	2 cut(s)	1425, 1591
MlsI	TGGCCA	3 cut(s)	983, 2415, 3032
MluNI	TGGCCA	3 cut(s)	983, 2415, 3032
MlyI	GAGTC	7 cut(s)	182, 653, 1850, 1880, 2543, 2832, 2987
MmeI	TCCRAC	9 cut(s)	156, 786, 1181, 1833, 1925, 2032, 2371, 2511, 3021
Mox20I	TGGCCA	3 cut(s)	983, 2415, 3032
MroXI	GAANNNNTTC	1 cut(s)	2980
MscI	TGGCCA	3 cut(s)	983, 2415, 3032
MslI	CAYNNNNRTG	3 cut(s)	692, 1734, 3026
Msp20I	TGGCCA	3 cut(s)	983, 2415, 3032
MspA1I	CMGCKG	4 cut(s)	195, 2159, 3056, 3167
MspI	CCGG	7 cut(s)	140, 256, 321, 1071, 1485, 2172, 2618
MspR9I	CCNGG	9 cut(s)	42, 126, 236, 322, 472, 2307, 2412, 2619, 2643
MunI	CAATTG	2 cut(s)	2274, 2953
Mva1269I	GAATGC	1 cut(s)	687
MvaI	CCWGG	7 cut(s)	42, 126, 236, 472, 2307, 2412, 2643
MvnI	CGCG	2 cut(s)	195, 338
MwoI	GCNNNNNNNGC	9 cut(s)	226, 344, 353, 727, 1429, 1456, 2672, 2705, 2948
NciI	CCSGG	2 cut(s)	322, 2619
NlaIV	GGNNCC	8 cut(s)	205, 384, 1424, 1615, 2472, 3051, 3213, 3214
NmeAIII	GCCGAG	1 cut(s)	128
NmuCI	GTSAC	6 cut(s)	160, 666, 758, 1935, 2225, 2427
NspI	RCATGY	7 cut(s)	535, 1231, 1463, 1739, 2888, 3078, 3227
NspV	TTCGAA	1 cut(s)	287
PaeI	GCATGC	4 cut(s)	535, 1739, 2888, 3227
PagI	TCATGA	2 cut(s)	910, 1497
PceI	AGGCCT	1 cut(s)	124
PciI	ACATGT	1 cut(s)	1227
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PctI	GAATGC	1 cut(s)	687
PdmI	GAANNNNTTC	1 cut(s)	2980
PflMI	CCANNNNNTGG	1 cut(s)	1200
PleI	GAGTC	7 cut(s)	181, 653, 1850, 1880, 2542, 2832, 2987
PpsI	GAGTC	7 cut(s)	181, 653, 1850, 1880, 2542, 2832, 2987
PpuMI	RGGWCCY	1 cut(s)	3212
PscI	ACATGT	1 cut(s)	1227
Psp5II	RGGWCCY	1 cut(s)	3212
Psp6I	CCWGG	7 cut(s)	40, 124, 234, 470, 2305, 2410, 2641
PspFI	CCCAGC	1 cut(s)	3167
PspGI	CCWGG	7 cut(s)	40, 124, 234, 470, 2305, 2410, 2641
PspN4I	GGNNCC	8 cut(s)	205, 384, 1424, 1615, 2472, 3051, 3213, 3214
PspPI	GGNCC	2 cut(s)	1614, 3212
PspPPI	RGGWCCY	1 cut(s)	3212
PsrI	GAACNNNNNNTAC	4 cut(s)	504, 536, 689, 721
PstI	CTGCAG	4 cut(s)	619, 2119, 2385, 3193
PstNI	CAGNNNCTG	2 cut(s)	1723, 2030
PsuI	RGATCY	2 cut(s)	2095, 2470
PvuII	CAGCTG	2 cut(s)	3056, 3167
RsaI	GTAC	2 cut(s)	254, 1489
RsaNI	GTAC	2 cut(s)	253, 1488
RseI	CAYNNNNRTG	3 cut(s)	692, 1734, 3026
SacII	CCGCGG	1 cut(s)	196
Sau96I	GGNCC	2 cut(s)	1614, 3212
SchI	GAGTC	7 cut(s)	182, 653, 1850, 1880, 2543, 2832, 2987
ScrFI	CCNGG	9 cut(s)	42, 126, 236, 322, 472, 2307, 2412, 2619, 2643
SduI	GDGCHC	2 cut(s)	1425, 1591
SfaNI	GCATC	9 cut(s)	831, 880, 1655, 1712, 1716, 1760, 2531, 2636, 2933
SfcI	CTRYAG	6 cut(s)	615, 1148, 1665, 2115, 2381, 3189
Sfr303I	CCGCGG	1 cut(s)	196
SfuI	TTCGAA	1 cut(s)	287
SgrBI	CCGCGG	1 cut(s)	196
SinI	GGWCC	1 cut(s)	3212
SmiMI	CAYNNNNRTG	3 cut(s)	692, 1734, 3026
SmlI	CTYRAG	6 cut(s)	1246, 1288, 1618, 1800, 2371, 3251
SmoI	CTYRAG	6 cut(s)	1246, 1288, 1618, 1800, 2371, 3251
SphI	GCATGC	4 cut(s)	535, 1739, 2888, 3227
SseBI	AGGCCT	1 cut(s)	124
SsiI	CCGC	9 cut(s)	129, 193, 195, 198, 201, 269, 338, 468, 2157
SspI	AATATT	2 cut(s)	871, 1006
SspMI	CTAG	6 cut(s)	387, 651, 756, 885, 966, 1281
StuI	AGGCCT	1 cut(s)	124
StyD4I	CCNGG	9 cut(s)	40, 124, 234, 320, 470, 2305, 2410, 2617, 2641
StyI	CCWWGG	6 cut(s)	73, 342, 965, 1031, 1439, 2466
TaiI	ACGT	2 cut(s)	676, 2863
TaqI	TCGA	7 cut(s)	32, 149, 287, 785, 1011, 2653, 2793
TauI	GCSGC	5 cut(s)	198, 201, 341, 470, 2159
TscAI	CASTG	6 cut(s)	358, 741, 832, 1057, 3033, 3074
TseFI	GTSAC	6 cut(s)	160, 666, 758, 1935, 2225, 2427
Tsp45I	GTSAC	6 cut(s)	160, 666, 758, 1935, 2225, 2427
TspGWI	ACGGA	1 cut(s)	2738
TspRI	CASTG	6 cut(s)	358, 741, 832, 1057, 3033, 3074
Van91I	CCANNNNNTGG	1 cut(s)	1200
VpaK11BI	GGWCC	1 cut(s)	3212
XapI	RAATTY	8 cut(s)	1207, 1501, 1839, 2083, 2175, 2577, 2944, 3244
XbaI	TCTAGA	1 cut(s)	650
XceI	RCATGY	7 cut(s)	535, 1231, 1463, 1739, 2888, 3078, 3227
XmaJI	CCTAGG	1 cut(s)	965
XmiI	GTMKAC	2 cut(s)	1147, 1877
XmnI	GAANNNNTTC	1 cut(s)	2980
XspI	CTAG	6 cut(s)	387, 651, 756, 885, 966, 1281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.