Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002532.1

Orthogroup ID

OG0006763

Physical Location & Seq

Genomic Coordinates Forward (+)

145496 .. 149249

Gene Structure 3754 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002532.1_g000029.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2970 bp

atggagagctcgcgtaggccgtttggcagatcgaacgaaccagggttgaagaaggcgagattgaacgacgaccaaggtgttttgaatccgaatctgaacggccgaggcttcggacaaaggcccggcggagctaatccggcgcttcagaggttcagagtgagtgatagagagtcggtggagggcaatgaccctcgcggcggcggagcctatgtgccgcagccagtgcagcaccaggagcttgtgagccagtaccggacggcgctggcggagctgacgttcaattcgaagccaatcatcaccaatttgaccataatcgctggggagaacctcaacgctgcgaaggccgtcactgccactatatgcgccaacattattgagacaaaagggttggctagtgatttagatgggactatgacaaactcgattgatgatttagacaggccggacagagtagcaagtatcagtgctggacgatcgtgggttgatcctcctgttaaaatgcctaatattcagcgttcaactagagatgcactaagtgagcgttttcatgagaagaacgttggtggcgaatatgacgactttgattatgattctgatcttccaaggagttcaaccttgggcattggacgatctggtgggaatattatcgagcaaggacatgataaaccttggtatggaggtggaagcagtgttgctgaaacaatttccagccaaagaaatggttttaacaagaagcatggattaaattactcagcacctaaatctgtaaatgctgatcctcgtttacagacaccacaagccattgcaaatagaaacaggggtgggttgtctagtagttggaagaattctgaggaagaggaatacatgtgggatgatgtgaactcaagatcaacagatcacgtaacccctgatctttctagtaattcaagaaaagagcgctggatttctgatgattcagagaaattggggtttggaggtggctctcgtaaactgaaaagagtaaatgatctggacttggctgctgatatcggtgatcagaaagacttagctgctctcgggcaccgtatgccgtcaccttggtcattgcaagagtcccgtgttgtggatcggctgacctctcctggtgctcctgtcattggttcagttcattcagagcgttatgtttcaagtttaagtgggttatcgacaagtggagactcttctgtggcgagattgggaagtagagcacagatgatgtcttctcgtattggggcctcaagctttgggttgccaacaattgctgcaacagggtctaatggagctgtagggaaacagcagcagtctctgagagctgcatcaccatctggacagttgctgatgcaccagcattctccctcacctacatcaaaaatacagcatccccgtaattatttggctgagcaagaccctgctcatgctccatcccttcctcctgatttaaaagtatctcaaattttgggaaaatcagacttaggtttgcatagccagtatactgaggactctttgcctattccaacgtccaatgttcgattgggtggcatggcaaaatcacagcctcaagatttgaaggctttgtcttcctcagtggctgccatccaatcaaggcaccactatcccttccgacaacaacaagacagtacagagcttgaatccttggatcagactcagaagccccatgtacctcacgttgctacttctgtaatgccctcaacagttagaaattctgtatcagatctttctaatctccttgctgcagaaacttcaggacagtcaagcacaagtagtttgttggctgctgttttgaagaccggaattctctctaataaatcaattactggtagcctgccaaatttgaattttggtgacaaggaaaaaatgccaccagagtcaggtggcccgccccccttgccaattggacggccgcctaccaaagttgcacttccagggtccaaagttgcagcagcaccaccttcattaggtcatccttcccgtgataactcaccgaccacctcaagtaccctgcagaaggttgcacatccacctcttccacctggccaaccacctttgtctctagagggtagctcaacagcaaaagatccaaatgtggtgaaaaatgccaaggatccaatatcagaccttttgagctctttagttgccaaggggttgatatctgcatcaaagtcggagtcacctactctgccatctcaaaagccaatagaggtgcaaagccagaacctatccacgattaccaccactactgtctctccagtgtcagcatcatcaaaagttcctgtttcatctgaagtggatgatacgtctctcacagaacaggtggctaaaccctctgatgccttggctcaatctactaagacggagaaaagaaacctaataggatttgagtttaagccagacaaaatccgagaattacatccatctgtcatcgatgagctttttgatgaccttccacataaatgtagcatatgtggcctcaggctcaaacttaaagaacgtcttgataggcacttggaatggcatactttgaaaactcccgaagcagatggttccattaaggcatcaagggggtggtatgcaaattcaaccaactgggttactggaaaggcaggaagttcttctgaacttgactccaacaattcaaacgacatgactggcaagacagtgatcagtaatgagcccatggttccagctgacgaaagccaatgtgcgtgtattatatgtggtaatacgtttgaagacttctattgtcaagaaagtgatgactggatgttcaaaggagctgtgtatatgactgttccatctggggatggtgagtttggaactgcagaggggagcattctgaagggtcccattgtgcatgcaaattgtatgaatgaaaattcactcgaggatttgggattggctgctacccgaattaaattggaaaaggatgtttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0000993 GO:0001098 GO:0001099 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0005849 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0019899 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0046483 GO:0070013 GO:0070063 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03015 ko04016 ko04075 map03015 map04016 map04075

Pfam Domains

Protein Families

CTD_bind

Protein Analysis

989

Amino Acids

105.92

Weight (kDa)

6.25

Isoelectric Point (pI)

54.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36480 AT2G36480
fragaria_vesca	FvH4_6g17910 FvH4_6g17910
malus_domestica	MD12G1018100.v1.1 MD14G1016100.v1.1
prunus_persica	Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1
pyrus_communis	pycom12g01510 pycom14g01390
rosa_chinensis	RchiOBHm_Chr3g0472161
rosa_laevigata	RLG00000024100
rosa_multiflora	Rmu_sc0002532.1_g000029 Rmu_sc0019091.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409180
rosa_rugosa	Rorug03G0122700
rosa_samantha	Rh3AG174700 Rh3BG200000 Rh3CG191200 Rh3CG198500 Rh3DG174500
rosa_wichuraiana	Rw3G016630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1059, 1623
AccI	GTMKAC	1 cut(s)	1508
AccII	CGCG	2 cut(s)	13, 195
AciI	CCGC	8 cut(s)	126, 195, 198, 201, 215, 266, 1916, 1940
AclI	AACGTT	1 cut(s)	558
AclWI	GGATC	7 cut(s)	479, 770, 1113, 1683, 2108, 2135, 2148
AcoI	YGGCCR	3 cut(s)	100, 1937, 2071
AcsI	RAATTY	8 cut(s)	844, 1470, 1738, 1830, 1867, 1873, 2611, 2911
AcuI	CTGAAG	4 cut(s)	128, 1764, 2340, 2894
AdeI	CACNNNGTG	1 cut(s)	536
AfaI	GTAC	4 cut(s)	251, 1657, 1698, 2035
AfeI	AGCGCT	1 cut(s)	938
AfiI	CCNNNNNNNGG	7 cut(s)	197, 674, 1102, 1136, 1907, 1994, 2044
AflIII	ACRYGT	1 cut(s)	864
AjnI	CCWGG	5 cut(s)	40, 231, 1120, 1960, 2068
AloI	GAACNNNNNNTCC	2 cut(s)	260, 292
Alw21I	GWGCWC	4 cut(s)	11, 1129, 1228, 2165
Alw26I	GTCTC	6 cut(s)	371, 1188, 1326, 2091, 2284, 2340
AlwI	GGATC	7 cut(s)	479, 770, 1113, 1683, 2108, 2135, 2148
AlwNI	CAGNNNCTG	3 cut(s)	1324, 1354, 1607
Ama87I	CYCGRG	2 cut(s)	1055, 2918
Aor51HI	AGCGCT	1 cut(s)	938
ApoI	RAATTY	8 cut(s)	844, 1470, 1738, 1830, 1867, 1873, 2611, 2911
ArsI	GACNNNNNNTTYG	4 cut(s)	265, 297, 2189, 2221
Asp700I	GAANNNNTTC	1 cut(s)	2647
AspLEI	GCGC	4 cut(s)	142, 262, 365, 939
AspS9I	GGNCC	5 cut(s)	120, 1251, 1913, 1965, 2879
AsuC2I	CCSGG	1 cut(s)	123
AsuII	TTCGAA	1 cut(s)	284
AvaI	CYCGRG	2 cut(s)	1055, 2918
AvaII	GGWCC	2 cut(s)	1965, 2879
AxyI	CCTNAGG	1 cut(s)	2507
BaeGI	GKGCMC	1 cut(s)	1062
BalI	TGGCCA	1 cut(s)	2073
BamHI	GGATCC	1 cut(s)	2140
BanI	GGYRCC	2 cut(s)	1059, 1623
BanII	GRGCYC	3 cut(s)	11, 2165, 2712
BbsI	GAAGAC	4 cut(s)	1230, 1587, 1829, 2775
Bbv12I	GWGCWC	4 cut(s)	11, 1129, 1228, 2165
BccI	CCATC	9 cut(s)	398, 1348, 1447, 1619, 2227, 2458, 2570, 2834, 2839
BceAI	ACGGC	6 cut(s)	4, 115, 273, 329, 1054, 1952
BcgI	CGANNNNNNTGC	2 cut(s)	2181, 2215
BciT130I	CCWGG	5 cut(s)	42, 233, 1122, 1962, 2070
BclI	TGATCA	2 cut(s)	1033, 2697
BcnI	CCSGG	1 cut(s)	123
BcoDI	GTCTC	6 cut(s)	371, 1188, 1326, 2091, 2284, 2340
BfaI	CTAG	5 cut(s)	393, 522, 831, 918, 2090
BfmI	CTRYAG	4 cut(s)	1302, 1770, 2039, 2856
BfoI	RGCGCY	3 cut(s)	143, 263, 940
BglII	AGATCT	1 cut(s)	1750
BlpI	GCTNAGC	1 cut(s)	1416
Bme1390I	CCNGG	6 cut(s)	42, 123, 233, 1122, 1962, 2070
Bme18I	GGWCC	2 cut(s)	1965, 2879
BmeT110I	CYCGRG	2 cut(s)	1055, 2918
BmgT120I	GGNCC	5 cut(s)	120, 1251, 1913, 1965, 2879
BmrFI	CCNGG	6 cut(s)	42, 123, 233, 1122, 1962, 2070
BmrI	ACTGGG	1 cut(s)	2632
BmsI	GCATC	8 cut(s)	517, 1343, 1347, 1405, 2201, 2303, 2356, 2600
BmuI	ACTGGG	1 cut(s)	2632
BpiI	GAAGAC	4 cut(s)	1230, 1587, 1829, 2775
BplI	GAGNNNNNCTC	2 cut(s)	2084, 2116
BpmI	CTGGAG	1 cut(s)	2268
Bpu1102I	GCTNAGC	1 cut(s)	1416
Bpu14I	TTCGAA	1 cut(s)	284
BpuEI	CTTGAG	4 cut(s)	868, 1240, 1560, 2014
BpuMI	CCSGG	1 cut(s)	123
Bsa29I	ATCGAT	1 cut(s)	2460
BsaAI	YACGTR	1 cut(s)	901
BsaBI	GATNNNNATC	1 cut(s)	594
BsaWI	WCCGGW	2 cut(s)	252, 1826
BsaXI	ACNNNNNCTCC	6 cut(s)	195, 225, 260, 290, 2266, 2296
Bsc4I	CCNNNNNNNGG	7 cut(s)	197, 674, 1102, 1136, 1907, 1994, 2044
Bse1I	ACTGG	9 cut(s)	221, 247, 1504, 1858, 2285, 2627, 2635, 2689, 2801
Bse21I	CCTNAGG	1 cut(s)	2507
Bse3DI	GCAATG	3 cut(s)	190, 801, 1082
Bse8I	GATNNNNATC	1 cut(s)	594
BseBI	CCWGG	5 cut(s)	42, 233, 1122, 1962, 2070
BseCI	ATCGAT	1 cut(s)	2460
BseJI	GATNNNNATC	1 cut(s)	594
BseLI	CCNNNNNNNGG	7 cut(s)	197, 674, 1102, 1136, 1907, 1994, 2044
BseMI	GCAATG	3 cut(s)	190, 801, 1082
BseMII	CTCAG	8 cut(s)	765, 840, 1316, 1407, 1503, 1614, 1697, 2521
BseNI	ACTGG	9 cut(s)	221, 247, 1504, 1858, 2285, 2627, 2635, 2689, 2801
BseSI	GKGCMC	1 cut(s)	1062
BseX3I	CGGCCG	2 cut(s)	100, 1937
BseYI	CCCAGC	1 cut(s)	317
BsgI	GTGCAG	1 cut(s)	245
Bsh1236I	CGCG	2 cut(s)	13, 195
Bsh1285I	CGRYCG	3 cut(s)	103, 476, 1940
BshNI	GGYRCC	2 cut(s)	1059, 1623
BshVI	ATCGAT	1 cut(s)	2460
BsiEI	CGRYCG	3 cut(s)	103, 476, 1940
BsiHKAI	GWGCWC	4 cut(s)	11, 1129, 1228, 2165
BsiHKCI	CYCGRG	2 cut(s)	1055, 2918
BsiSI	CCGG	5 cut(s)	123, 137, 253, 443, 1827
BslFI	GGGAC	3 cut(s)	421, 1078, 2865
BslI	CCNNNNNNNGG	7 cut(s)	197, 674, 1102, 1136, 1907, 1994, 2044
BsmAI	GTCTC	6 cut(s)	371, 1188, 1326, 2091, 2284, 2340
BsmBI	CGTCTC	1 cut(s)	2340
BsmFI	GGGAC	3 cut(s)	421, 1078, 2865
BsmI	GAATGC	2 cut(s)	1366, 2868
BsoBI	CYCGRG	2 cut(s)	1055, 2918
Bsp119I	TTCGAA	1 cut(s)	284
Bsp1286I	GDGCHC	6 cut(s)	11, 1062, 1129, 1228, 2165, 2712
Bsp1720I	GCTNAGC	1 cut(s)	1416
Bsp19I	CCATGG	1 cut(s)	2712
BspACI	CCGC	8 cut(s)	126, 195, 198, 201, 215, 266, 1916, 1940
BspCNI	CTCAG	8 cut(s)	764, 841, 1317, 1408, 1504, 1613, 1696, 2520
BspDI	ATCGAT	1 cut(s)	2460
BspFNI	CGCG	2 cut(s)	13, 195
BspHI	TCATGA	1 cut(s)	547
BspMAI	CTGCAG	3 cut(s)	1774, 2043, 2860
BspPI	GGATC	7 cut(s)	479, 770, 1113, 1683, 2108, 2135, 2148
BspT104I	TTCGAA	1 cut(s)	284
BspT107I	GGYRCC	2 cut(s)	1059, 1623
BsrDI	GCAATG	3 cut(s)	190, 801, 1082
BsrI	ACTGG	9 cut(s)	221, 247, 1504, 1858, 2285, 2627, 2635, 2689, 2801
BssNAI	GTATAC	1 cut(s)	1509
Bst1107I	GTATAC	1 cut(s)	1509
Bst2UI	CCWGG	5 cut(s)	42, 233, 1122, 1962, 2070
Bst4CI	ACNGT	8 cut(s)	1064, 1350, 1655, 1732, 1788, 2278, 2695, 2827
Bst6I	CTCTTC	3 cut(s)	849, 1204, 2067
BstAPI	GCANNNNNTGC	2 cut(s)	223, 1066
BstBAI	YACGTR	1 cut(s)	901
BstBI	TTCGAA	1 cut(s)	284
BstC8I	GCNNGC	5 cut(s)	11, 264, 1862, 1916, 2892
BstDSI	CCRYGG	1 cut(s)	2712
BstENI	CCTNNNNNAGG	2 cut(s)	1992, 2042
BstFNI	CGCG	2 cut(s)	13, 195
BstH2I	RGCGCY	3 cut(s)	143, 263, 940
BstHHI	GCGC	4 cut(s)	142, 262, 365, 939
BstMAI	GTCTC	6 cut(s)	371, 1188, 1326, 2091, 2284, 2340
BstMCI	CGRYCG	3 cut(s)	103, 476, 1940
BstNI	CCWGG	5 cut(s)	42, 233, 1122, 1962, 2070
BstNSI	RCATGY	2 cut(s)	868, 2894
BstSCI	CCNGG	6 cut(s)	40, 121, 231, 1120, 1960, 2068
BstSFI	CTRYAG	4 cut(s)	1302, 1770, 2039, 2856
BstSLI	GKGCMC	1 cut(s)	1062
BstUI	CGCG	2 cut(s)	13, 195
BstV2I	GAAGAC	4 cut(s)	1230, 1587, 1829, 2775
BstX2I	RGATCY	3 cut(s)	1750, 2113, 2140
BstXI	CCANNNNNNTGG	1 cut(s)	719
BstYI	RGATCY	3 cut(s)	1750, 2113, 2140
BstZ17I	GTATAC	1 cut(s)	1509
BstZI	CGGCCG	2 cut(s)	100, 1937
Bsu15I	ATCGAT	1 cut(s)	2460
Bsu36I	CCTNAGG	1 cut(s)	2507
BsuTUI	ATCGAT	1 cut(s)	2460
BtgI	CCRYGG	1 cut(s)	2712
BtsI	GCAGTG	2 cut(s)	348, 694
BtsIMutI	CAGTG	7 cut(s)	228, 348, 469, 694, 1608, 2292, 2700
Cac8I	GCNNGC	5 cut(s)	11, 264, 1862, 1916, 2892
CaiI	CAGNNNCTG	3 cut(s)	1324, 1354, 1607
CciI	TCATGA	1 cut(s)	547
CfoI	GCGC	4 cut(s)	142, 262, 365, 939
Cfr13I	GGNCC	5 cut(s)	120, 1251, 1913, 1965, 2879
ClaI	ATCGAT	1 cut(s)	2460
Csp6I	GTAC	4 cut(s)	250, 1656, 1697, 2034
CviQI	GTAC	4 cut(s)	250, 1656, 1697, 2034
DraI	TTTAAA	1 cut(s)	1458
DraIII	CACNNNGTG	1 cut(s)	536
EaeI	YGGCCR	3 cut(s)	100, 1937, 2071
EagI	CGGCCG	2 cut(s)	100, 1937
Eam1104I	CTCTTC	3 cut(s)	849, 1204, 2067
EarI	CTCTTC	3 cut(s)	849, 1204, 2067
EciI	GGCGGA	3 cut(s)	141, 216, 281
Ecl136II	GAGCTC	2 cut(s)	9, 2163
EclXI	CGGCCG	2 cut(s)	100, 1937
Eco24I	GRGCYC	3 cut(s)	11, 2165, 2712
Eco32I	GATATC	2 cut(s)	1027, 2187
Eco47I	GGWCC	2 cut(s)	1965, 2879
Eco47III	AGCGCT	1 cut(s)	938
Eco52I	CGGCCG	2 cut(s)	100, 1937
Eco53kI	GAGCTC	2 cut(s)	9, 2163
Eco57I	CTGAAG	4 cut(s)	128, 1764, 2340, 2894
Eco81I	CCTNAGG	1 cut(s)	2507
Eco88I	CYCGRG	2 cut(s)	1055, 2918
EcoICRI	GAGCTC	2 cut(s)	9, 2163
EcoNI	CCTNNNNNAGG	2 cut(s)	1992, 2042
EcoO109I	RGGNCCY	2 cut(s)	1251, 2879
EcoRI	GAATTC	2 cut(s)	844, 1830
EcoRII	CCWGG	5 cut(s)	40, 231, 1120, 1960, 2068
EcoRV	GATATC	2 cut(s)	1027, 2187
EcoT38I	GRGCYC	3 cut(s)	11, 2165, 2712
Esp3I	CGTCTC	1 cut(s)	2340
FalI	AAGNNNNNCTT	4 cut(s)	1941, 1973, 2514, 2546
FaqI	GGGAC	3 cut(s)	421, 1078, 2865
FauI	CCCGC	1 cut(s)	1923
FauNDI	CATATG	1 cut(s)	2498
FbaI	TGATCA	2 cut(s)	1033, 2697
FblI	GTMKAC	1 cut(s)	1508
FriOI	GRGCYC	3 cut(s)	11, 2165, 2712
FspBI	CTAG	5 cut(s)	393, 522, 831, 918, 2090
GlaI	GCGC	4 cut(s)	141, 261, 364, 938
GsaI	CCCAGC	1 cut(s)	321
GsuI	CTGGAG	1 cut(s)	2268
HaeII	RGCGCY	3 cut(s)	143, 263, 940
HapII	CCGG	5 cut(s)	123, 137, 253, 443, 1827
HhaI	GCGC	4 cut(s)	142, 262, 365, 939
Hin6I	GCGC	4 cut(s)	140, 260, 363, 937
HinP1I	GCGC	4 cut(s)	140, 260, 363, 937
HindIII	AAGCTT	1 cut(s)	1258
HpaII	CCGG	5 cut(s)	123, 137, 253, 443, 1827
Hpy166II	GTNNAC	4 cut(s)	785, 880, 989, 1509
Hpy8I	GTNNAC	4 cut(s)	785, 880, 989, 1509
Hpy99I	CGWCG	1 cut(s)	71
HpyCH4III	ACNGT	8 cut(s)	1064, 1350, 1655, 1732, 1788, 2278, 2695, 2827
HpyCH4IV	ACGT	8 cut(s)	275, 558, 900, 1535, 1704, 2333, 2527, 2762
HpySE526I	ACGT	8 cut(s)	275, 558, 900, 1535, 1704, 2333, 2527, 2762
HspAI	GCGC	4 cut(s)	140, 260, 363, 937
KflI	GGGWCCC	1 cut(s)	2879
Ksp22I	TGATCA	2 cut(s)	1033, 2697
LmnI	GCTCC	9 cut(s)	128, 203, 235, 268, 1132, 1298, 1441, 2810, 2865
LweI	GCATC	8 cut(s)	517, 1343, 1347, 1405, 2201, 2303, 2356, 2600
MaeI	CTAG	5 cut(s)	393, 522, 831, 918, 2090
MaeII	ACGT	8 cut(s)	275, 558, 900, 1535, 1704, 2333, 2527, 2762
MaeIII	GTNAC	6 cut(s)	346, 901, 1071, 1880, 2205, 2626
MfeI	CAATTG	2 cut(s)	1275, 1929
MflI	RGATCY	3 cut(s)	1750, 2113, 2140
MhlI	GDGCHC	6 cut(s)	11, 1062, 1129, 1228, 2165, 2712
MlsI	TGGCCA	1 cut(s)	2073
MluNI	TGGCCA	1 cut(s)	2073
MlyI	GAGTC	8 cut(s)	179, 1100, 1190, 1511, 1675, 1913, 2213, 2654
MmeI	TCCRAC	5 cut(s)	818, 1556, 1663, 2181, 2688
Mox20I	TGGCCA	1 cut(s)	2073
MroXI	GAANNNNTTC	1 cut(s)	2647
MscI	TGGCCA	1 cut(s)	2073
MseI	TTAA	9 cut(s)	495, 726, 743, 1172, 1457, 2421, 2520, 2586, 2949
MslI	CAYNNNNRTG	1 cut(s)	2488
Msp20I	TGGCCA	1 cut(s)	2073
MspA1I	CMGCKG	1 cut(s)	2723
MspI	CCGG	5 cut(s)	123, 137, 253, 443, 1827
MspR9I	CCNGG	6 cut(s)	42, 123, 233, 1122, 1962, 2070
MunI	CAATTG	2 cut(s)	1275, 1929
Mva1269I	GAATGC	2 cut(s)	1366, 2868
MvaI	CCWGG	5 cut(s)	42, 233, 1122, 1962, 2070
MvnI	CGCG	2 cut(s)	13, 195
NciI	CCSGG	1 cut(s)	123
NcoI	CCATGG	1 cut(s)	2712
NdeI	CATATG	1 cut(s)	2498
NmeAIII	GCCGAG	1 cut(s)	128
NmuCI	GTSAC	4 cut(s)	346, 1071, 1880, 2205
NspI	RCATGY	2 cut(s)	868, 2894
NspV	TTCGAA	1 cut(s)	284
PaeI	GCATGC	1 cut(s)	2894
PaeR7I	CTCGAG	1 cut(s)	2918
PagI	TCATGA	1 cut(s)	547
PciI	ACATGT	1 cut(s)	864
PcsI	WCGNNNNNNNCGW	3 cut(s)	17, 281, 564
PctI	GAATGC	2 cut(s)	1366, 2868
PdmI	GAANNNNTTC	1 cut(s)	2647
PfeI	GAWTC	5 cut(s)	85, 91, 590, 953, 1667
Ple19I	CGATCG	1 cut(s)	476
PleI	GAGTC	8 cut(s)	178, 1099, 1190, 1511, 1675, 1912, 2212, 2654
PpsI	GAGTC	8 cut(s)	178, 1099, 1190, 1511, 1675, 1912, 2212, 2654
Ppu21I	YACGTR	1 cut(s)	901
PpuMI	RGGWCCY	1 cut(s)	2879
PscI	ACATGT	1 cut(s)	864
Psp124BI	GAGCTC	2 cut(s)	11, 2165
Psp1406I	AACGTT	1 cut(s)	558
Psp5II	RGGWCCY	1 cut(s)	2879
Psp6I	CCWGG	5 cut(s)	40, 231, 1120, 1960, 2068
PspFI	CCCAGC	1 cut(s)	317
PspGI	CCWGG	5 cut(s)	40, 231, 1120, 1960, 2068
PspPI	GGNCC	5 cut(s)	120, 1251, 1913, 1965, 2879
PspPPI	RGGWCCY	1 cut(s)	2879
PspXI	VCTCGAGB	1 cut(s)	2918
PstI	CTGCAG	3 cut(s)	1774, 2043, 2860
PstNI	CAGNNNCTG	3 cut(s)	1324, 1354, 1607
PsuI	RGATCY	3 cut(s)	1750, 2113, 2140
PvuI	CGATCG	1 cut(s)	476
PvuII	CAGCTG	1 cut(s)	2723
RsaI	GTAC	4 cut(s)	251, 1657, 1698, 2035
RsaNI	GTAC	4 cut(s)	250, 1656, 1697, 2034
RseI	CAYNNNNRTG	1 cut(s)	2488
SacI	GAGCTC	2 cut(s)	11, 2165
SaqAI	TTAA	9 cut(s)	495, 726, 743, 1172, 1457, 2421, 2520, 2586, 2949
Sau96I	GGNCC	5 cut(s)	120, 1251, 1913, 1965, 2879
SchI	GAGTC	8 cut(s)	179, 1100, 1190, 1511, 1675, 1913, 2213, 2654
ScrFI	CCNGG	6 cut(s)	42, 123, 233, 1122, 1962, 2070
SduI	GDGCHC	6 cut(s)	11, 1062, 1129, 1228, 2165, 2712
SfaNI	GCATC	8 cut(s)	517, 1343, 1347, 1405, 2201, 2303, 2356, 2600
SfcI	CTRYAG	4 cut(s)	1302, 1770, 2039, 2856
Sfr274I	CTCGAG	1 cut(s)	2918
SfuI	TTCGAA	1 cut(s)	284
SinI	GGWCC	2 cut(s)	1965, 2879
SlaI	CTCGAG	1 cut(s)	2918
SmiMI	CAYNNNNRTG	1 cut(s)	2488
SmlI	CTYRAG	5 cut(s)	883, 1255, 1575, 2029, 2918
SmoI	CTYRAG	5 cut(s)	883, 1255, 1575, 2029, 2918
SphI	GCATGC	1 cut(s)	2894
SsiI	CCGC	8 cut(s)	126, 195, 198, 201, 215, 266, 1916, 1940
SspI	AATATT	2 cut(s)	508, 643
SspMI	CTAG	5 cut(s)	393, 522, 831, 918, 2090
SstI	GAGCTC	2 cut(s)	11, 2165
StyD4I	CCNGG	6 cut(s)	40, 121, 231, 1120, 1960, 2068
TaaI	ACNGT	8 cut(s)	1064, 1350, 1655, 1732, 1788, 2278, 2695, 2827
TaiI	ACGT	8 cut(s)	278, 561, 903, 1538, 1707, 2336, 2530, 2765
TaqI	TCGA	8 cut(s)	32, 284, 422, 648, 1184, 1546, 2460, 2919
TatI	WGTACW	1 cut(s)	1655
TauI	GCSGC	4 cut(s)	198, 201, 217, 1942
TfiI	GAWTC	5 cut(s)	85, 91, 590, 953, 1667
Tru1I	TTAA	9 cut(s)	495, 726, 743, 1172, 1457, 2421, 2520, 2586, 2949
Tru9I	TTAA	9 cut(s)	495, 726, 743, 1172, 1457, 2421, 2520, 2586, 2949
TscAI	CASTG	7 cut(s)	228, 355, 469, 694, 1608, 2292, 2700
TseFI	GTSAC	4 cut(s)	346, 1071, 1880, 2205
Tsp45I	GTSAC	4 cut(s)	346, 1071, 1880, 2205
TspDTI	ATGAA	6 cut(s)	536, 1136, 1980, 2304, 2918, 2922
TspGWI	ACGGA	1 cut(s)	2405
TspRI	CASTG	7 cut(s)	228, 355, 469, 694, 1608, 2292, 2700
VpaK11BI	GGWCC	2 cut(s)	1965, 2879
XagI	CCTNNNNNAGG	2 cut(s)	1992, 2042
XapI	RAATTY	8 cut(s)	844, 1470, 1738, 1830, 1867, 1873, 2611, 2911
XbaI	TCTAGA	1 cut(s)	2089
XceI	RCATGY	2 cut(s)	868, 2894
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1546
XhoI	CTCGAG	1 cut(s)	2918
XmiI	GTMKAC	1 cut(s)	1508
XmnI	GAANNNNTTC	1 cut(s)	2647
XspI	CTAG	5 cut(s)	393, 522, 831, 918, 2090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.