Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0006763

Physical Location & Seq

Genomic Coordinates Reverse (-)

15447502 .. 15456444

Gene Structure 8943 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG174500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2598 bp

ATGAAGACAAAAGGGATGGCTAGTGATTTAGATGGGACAATGACAAACTCGATTGATGATTTAGACAGGCCGGACAGAGTAGCAAGTATCAGTGCTGGACGATCGTGGGTTGATCCTCCTGTTAAAATGCCTAATATTCAGCGTTCAACTAGAGATGCACTAAGTGAGCGTTTTCATGAGAAGAACGTTGGTGGCGAATATGACGACTTTGATTATGATTCTGATCTTCCAAGGAGTTCAACCTTGGGCATTGGACGATCTGGTGGGAATATTATCGAGCAAGGACATGATAAACCTTGGTATGGAGGTGGAAGCAGTGTTGCCGAAACAATTTCCAGCCAAAGAAATGGTTTTAACAAGAAGCATGGATTAAATTACTCAGCACCTAAATCTGTAAATGCTGATCCTCGTTTACAGACACCACAAGCCATTGCAAATAGAAACAGGGGTGGGTTGTCTAGTAGTTGGAAGAATTCTGAGGAAGAGGAATACATGTGGGATGATGTGAACTCAAGATCAACAGATCACGTAACCCCTGATCTTTCTAGTAATTCAAGAAAAGAGCGCTGGATTTCTGATGATTCAGAGAAATTGGGGTTTGGAGGTGGCTCTCGTAAACTGAAAAGAGTAAATGATCTGGACTTGGCTGCTGATATCGGTGATCAGAAAGACTTAGCTGCTCTCGGGCACCGTATGCCGTCACCTTGGTCATTGCAAGAGTCGCATGTTGTGGATCGGCTGACCTCTCCTGGTGCTCCTGTCATTGGTTCAGTTCATTCAGAGCGTTATGTTTCAAGTTTAAGTGGGTTATCGACAAGTGGAGACTCTTCTGTGGCGAGATTGGGAAATAGAGCACAGATGATGTCTTCTCGTATTGGGGCCTCAAGCTTTGGGTTGCCAACAATTGCTGCAACAGGGTCTAATGGAGCTGTAGGGAAACAGCAGCAGTCTCTGAGAGCTGCATCACCATCTGGACAGTTGCTGATGCACCAGCATTCTCCCTCACCTACATCAAAAATACAGCATCCCCGTAATTATTTGGCTGAGCAAGACCCTGCTCATGCTCCATCCCTTCCTCCTGATTTAAAAGTATCTCAAATTTTGGGAAAATCGGACTTAGGTTTGCATAGCCAGTATACTGAGGACTCTTTGCCTATTCCAACGTCCAATGTTCGATTGGGTGGCATGGCAAAATCACAGCCTCAAGATTTGAAGGCTTTGTCATCCTCAGTGGCTGCCATCCAATCAAGGCACCACTATCCCTTCCGACAACAACAAGACAGTACAGAGCTGGAATCCTTGGATCAGACTCAGAAGCCCCATGTACCTCACGTTGCTACTTCTGTAATGCCCTCAACAGTTAGAAATTCTGTATCAGATCTTTCTAATCTCCTTGCTGCAGAAACTTCAGGACAGTCAAGCACAAGTAGTTTGTTGGCTGCTGTTTTGAAGACCGGAATTCTCTCTAATAAATCAATTACTGGTAGCCTGCCCAATTTGAATTTTGGTGACAAGGAAAAAATGCCACCAGAGTCAGGTGGCCCGCCCCCCTTGCCAATTGGACGGCCGCCTACCAAAGTTGCACTTCCAGGGTCCAAAGTTGCAGCAGCACCACCTTCATTAGGTCATCCTTCCCGTGATAACTCGCCGACCACCTCAAGTACTCTGCAGAAGGTTGCACATCCACCTCTTCCACCTGGCCAACCACCTTTGTCTCTAGAGGGTAGCTCAACAGCAAAAGATCCAAATGTGGTGAAAAATGCCAAGGATCCAATATCAAATCTTTTGAGCTCTTTAGTTGCCAAGGGGTTGATATCTGCATCAAAGTCGGAGTCACCTACTCTGCCATCTCAAAAGCTGATAGAGGTGCAAAGCCAGAACCTATCCACAACTACCACCACTACTGTCTCTCCAGTGTCAGCATCATCAAAAGTTCCTGTTTCATCTGAAATGGATGATACGTCTCTCACAGAACAGGTGGCTAAACCCTCTGATGCCTTGGCTCAATCTACTATGACGGAAAAAAGAAACCTAATAGGATTCGAGTTTAAGCCAGACAAAATCCGAGAATTATATCCATCTGTCATCGATGAGCTTTTTGATGACCTTCCACATAAATGTAGCATATGTGGCCTCAGGCTCAAACTTAAAGAACGTCTTGATAGGCACTTGGAATGGCATACTTTGAAAACTCCCGAAGCAGATGGTTCCATTAAGGCATCAAGGGGGTGGTATGCAAATTCAACCAACTGGGTTACTGGAAAGGCAGGAAGTTCTTCTGAACTTGACTCCAACAATTCAAACGACATGACTGGCAAGACAGTGATTGGTAATGAGCCCATGGTTCCAGCTGACGAAAGCCAATGTGCGTGTGTTATATGTGGTAATACGTTTGAAGACTTCTATTGTCAAGAAAGTGATGACTGGATGTTCAAAGAAGCTGTGTATATGACTGTTCCATCTGGGGATGGTGAGTTTGGAACTGCAGAGGGGAGCGTTCTGAAGGGTCCCATTGTGCATGCAAATTGTATGGATGAAAATTCACTTGAGGATTTGGGACTGGCTGCTACCCGAATTAAATTGGAAAAGGATGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0000993 GO:0001098 GO:0001099 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0005849 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0019899 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0046483 GO:0070013 GO:0070063 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03015 ko04016 ko04075 map03015 map04016 map04075

Pfam Domains

Protein Families

CTD_bind

Protein Analysis

865

Amino Acids

92.7

Weight (kDa)

5.91

Isoelectric Point (pI)

55.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf_PCFS4	PF23228	778 - 846	4e-30	PCFS4 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36480 AT2G36480
fragaria_vesca	FvH4_6g17910 FvH4_6g17910
malus_domestica	MD12G1018100.v1.1 MD14G1016100.v1.1
prunus_persica	Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1 Prupe.7G117000_v2.0.a1
pyrus_communis	pycom12g01510 pycom14g01390
rosa_chinensis	RchiOBHm_Chr3g0472161
rosa_laevigata	RLG00000024100
rosa_multiflora	Rmu_sc0002532.1_g000029 Rmu_sc0019091.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409180
rosa_rugosa	Rorug03G0122700
rosa_samantha	Rh3AG174700 Rh3BG200000 Rh3CG191200 Rh3CG198500 Rh3DG174500
rosa_wichuraiana	Rw3G016630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	687, 1251
AccI	GTMKAC	1 cut(s)	1136
AciI	CCGC	2 cut(s)	1544, 1568
AclI	AACGTT	1 cut(s)	186
AclWI	GGATC	7 cut(s)	107, 398, 741, 1311, 1736, 1763, 1776
AcoI	YGGCCR	2 cut(s)	1565, 1699
AcsI	RAATTY	7 cut(s)	472, 1098, 1366, 1458, 1501, 2239, 2539
AcuI	CTGAAG	2 cut(s)	1392, 2522
AdeI	CACNNNGTG	1 cut(s)	164
AfaI	GTAC	3 cut(s)	1285, 1326, 1663
AfeI	AGCGCT	1 cut(s)	566
AfiI	CCNNNNNNNGG	4 cut(s)	302, 764, 1535, 1622
AflIII	ACRYGT	1 cut(s)	492
AjnI	CCWGG	3 cut(s)	748, 1588, 1696
Alw21I	GWGCWC	3 cut(s)	757, 856, 1793
Alw26I	GTCTC	5 cut(s)	816, 954, 1719, 1912, 1968
AlwI	GGATC	7 cut(s)	107, 398, 741, 1311, 1736, 1763, 1776
AlwNI	CAGNNNCTG	3 cut(s)	952, 982, 1235
Ama87I	CYCGRG	1 cut(s)	683
Aor51HI	AGCGCT	1 cut(s)	566
AoxI	GGCC	6 cut(s)	68, 879, 1540, 1565, 1699, 2131
ApoI	RAATTY	7 cut(s)	472, 1098, 1366, 1458, 1501, 2239, 2539
ArsI	GACNNNNNNTTYG	2 cut(s)	1817, 1849
Asp700I	GAANNNNTTC	1 cut(s)	2275
AspLEI	GCGC	1 cut(s)	567
AspS9I	GGNCC	4 cut(s)	879, 1541, 1593, 2507
AsuHPI	GGTGA	8 cut(s)	671, 693, 957, 996, 1520, 1765, 1827, 2483
AvaI	CYCGRG	1 cut(s)	683
AvaII	GGWCC	2 cut(s)	1593, 2507
AxyI	CCTNAGG	1 cut(s)	2135
BaeGI	GKGCMC	1 cut(s)	690
BalI	TGGCCA	1 cut(s)	1701
BamHI	GGATCC	1 cut(s)	1768
BanI	GGYRCC	2 cut(s)	687, 1251
BanII	GRGCYC	2 cut(s)	1793, 2340
BbsI	GAAGAC	4 cut(s)	11, 858, 1457, 2403
Bbv12I	GWGCWC	3 cut(s)	757, 856, 1793
BceAI	ACGGC	2 cut(s)	682, 1580
BcgI	CGANNNNNNTGC	2 cut(s)	1809, 1843
BciT130I	CCWGG	3 cut(s)	750, 1590, 1698
BclI	TGATCA	1 cut(s)	661
BcoDI	GTCTC	5 cut(s)	816, 954, 1719, 1912, 1968
BfaI	CTAG	5 cut(s)	21, 150, 459, 546, 1718
BfmI	CTRYAG	4 cut(s)	930, 1398, 1667, 2484
BfoI	RGCGCY	1 cut(s)	568
BglII	AGATCT	1 cut(s)	1378
BlpI	GCTNAGC	1 cut(s)	1044
BmcAI	AGTACT	1 cut(s)	1663
Bme1390I	CCNGG	3 cut(s)	750, 1590, 1698
Bme18I	GGWCC	2 cut(s)	1593, 2507
BmeT110I	CYCGRG	1 cut(s)	683
BmgT120I	GGNCC	4 cut(s)	879, 1541, 1593, 2507
BmiI	GGNNCC	9 cut(s)	689, 880, 1253, 1594, 1770, 2209, 2346, 2508, 2509
BmrFI	CCNGG	3 cut(s)	750, 1590, 1698
BmrI	ACTGGG	1 cut(s)	2260
BmsI	GCATC	8 cut(s)	145, 971, 975, 1033, 1829, 1931, 1984, 2228
BmuI	ACTGGG	1 cut(s)	2260
BpiI	GAAGAC	4 cut(s)	11, 858, 1457, 2403
BplI	GAGNNNNNCTC	2 cut(s)	1712, 1744
BpmI	CTGGAG	1 cut(s)	1896
Bpu1102I	GCTNAGC	1 cut(s)	1044
BpuEI	CTTGAG	5 cut(s)	496, 868, 1188, 1642, 2567
Bsa29I	ATCGAT	1 cut(s)	2088
BsaAI	YACGTR	1 cut(s)	529
BsaBI	GATNNNNATC	1 cut(s)	222
BsaWI	WCCGGW	1 cut(s)	1454
BsaXI	ACNNNNNCTCC	2 cut(s)	1894, 1924
Bsc4I	CCNNNNNNNGG	4 cut(s)	302, 764, 1535, 1622
Bse1I	ACTGG	8 cut(s)	1132, 1486, 1913, 2255, 2263, 2317, 2429, 2565
Bse21I	CCTNAGG	1 cut(s)	2135
Bse3DI	GCAATG	2 cut(s)	429, 710
Bse8I	GATNNNNATC	1 cut(s)	222
BseBI	CCWGG	3 cut(s)	750, 1590, 1698
BseCI	ATCGAT	1 cut(s)	2088
BseJI	GATNNNNATC	1 cut(s)	222
BseLI	CCNNNNNNNGG	4 cut(s)	302, 764, 1535, 1622
BseMI	GCAATG	2 cut(s)	429, 710
BseMII	CTCAG	8 cut(s)	393, 468, 944, 1035, 1131, 1242, 1325, 2149
BseNI	ACTGG	8 cut(s)	1132, 1486, 1913, 2255, 2263, 2317, 2429, 2565
BseSI	GKGCMC	1 cut(s)	690
BseX3I	CGGCCG	1 cut(s)	1565
Bsh1285I	CGRYCG	2 cut(s)	104, 1568
BshFI	GGCC	6 cut(s)	70, 881, 1542, 1567, 1701, 2133
BshNI	GGYRCC	2 cut(s)	687, 1251
BshVI	ATCGAT	1 cut(s)	2088
BsiEI	CGRYCG	2 cut(s)	104, 1568
BsiHKAI	GWGCWC	3 cut(s)	757, 856, 1793
BsiHKCI	CYCGRG	1 cut(s)	683
BsiSI	CCGG	2 cut(s)	71, 1455
BslFI	GGGAC	3 cut(s)	49, 2493, 2571
BslI	CCNNNNNNNGG	4 cut(s)	302, 764, 1535, 1622
BsmAI	GTCTC	5 cut(s)	816, 954, 1719, 1912, 1968
BsmBI	CGTCTC	1 cut(s)	1968
BsmFI	GGGAC	3 cut(s)	49, 2493, 2571
BsmI	GAATGC	1 cut(s)	994
BsnI	GGCC	6 cut(s)	70, 881, 1542, 1567, 1701, 2133
BsoBI	CYCGRG	1 cut(s)	683
Bsp1286I	GDGCHC	5 cut(s)	690, 757, 856, 1793, 2340
Bsp1720I	GCTNAGC	1 cut(s)	1044
Bsp19I	CCATGG	1 cut(s)	2340
BspACI	CCGC	2 cut(s)	1544, 1568
BspANI	GGCC	6 cut(s)	70, 881, 1542, 1567, 1701, 2133
BspCNI	CTCAG	8 cut(s)	392, 469, 945, 1036, 1132, 1241, 1324, 2148
BspDI	ATCGAT	1 cut(s)	2088
BspHI	TCATGA	1 cut(s)	175
BspLI	GGNNCC	9 cut(s)	689, 880, 1253, 1594, 1770, 2209, 2346, 2508, 2509
BspMAI	CTGCAG	3 cut(s)	1402, 1671, 2488
BspPI	GGATC	7 cut(s)	107, 398, 741, 1311, 1736, 1763, 1776
BspT107I	GGYRCC	2 cut(s)	687, 1251
BsrDI	GCAATG	2 cut(s)	429, 710
BsrI	ACTGG	8 cut(s)	1132, 1486, 1913, 2255, 2263, 2317, 2429, 2565
BssNAI	GTATAC	1 cut(s)	1137
BssT1I	CCWWGG	9 cut(s)	230, 243, 296, 704, 1299, 1764, 1803, 1998, 2340
Bst1107I	GTATAC	1 cut(s)	1137
Bst2UI	CCWGG	3 cut(s)	750, 1590, 1698
Bst4CI	ACNGT	8 cut(s)	692, 978, 1283, 1360, 1416, 1906, 2323, 2455
Bst6I	CTCTTC	3 cut(s)	477, 832, 1695
BstAPI	GCANNNNNTGC	1 cut(s)	694
BstBAI	YACGTR	1 cut(s)	529
BstC8I	GCNNGC	3 cut(s)	1490, 1544, 2520
BstDSI	CCRYGG	1 cut(s)	2340
BstENI	CCTNNNNNAGG	1 cut(s)	1620
BstH2I	RGCGCY	1 cut(s)	568
BstHHI	GCGC	1 cut(s)	567
BstMAI	GTCTC	5 cut(s)	816, 954, 1719, 1912, 1968
BstMCI	CGRYCG	2 cut(s)	104, 1568
BstMWI	GCNNNNNNNGC	4 cut(s)	694, 721, 1552, 2130
BstNI	CCWGG	3 cut(s)	750, 1590, 1698
BstNSI	RCATGY	3 cut(s)	496, 728, 2522
BstSCI	CCNGG	3 cut(s)	748, 1588, 1696
BstSFI	CTRYAG	4 cut(s)	930, 1398, 1667, 2484
BstSLI	GKGCMC	1 cut(s)	690
BstV2I	GAAGAC	4 cut(s)	11, 858, 1457, 2403
BstX2I	RGATCY	3 cut(s)	1378, 1741, 1768
BstXI	CCANNNNNNTGG	1 cut(s)	347
BstYI	RGATCY	3 cut(s)	1378, 1741, 1768
BstZ17I	GTATAC	1 cut(s)	1137
BstZI	CGGCCG	1 cut(s)	1565
Bsu15I	ATCGAT	1 cut(s)	2088
Bsu36I	CCTNAGG	1 cut(s)	2135
BsuRI	GGCC	6 cut(s)	70, 881, 1542, 1567, 1701, 2133
BsuTUI	ATCGAT	1 cut(s)	2088
BtgI	CCRYGG	1 cut(s)	2340
BtsI	GCAGTG	1 cut(s)	322
BtsIMutI	CAGTG	5 cut(s)	97, 322, 1236, 1920, 2328
Cac8I	GCNNGC	3 cut(s)	1490, 1544, 2520
CaiI	CAGNNNCTG	3 cut(s)	952, 982, 1235
CciI	TCATGA	1 cut(s)	175
CfoI	GCGC	1 cut(s)	567
Cfr13I	GGNCC	4 cut(s)	879, 1541, 1593, 2507
ClaI	ATCGAT	1 cut(s)	2088
Csp6I	GTAC	3 cut(s)	1284, 1325, 1662
CviQI	GTAC	3 cut(s)	1284, 1325, 1662
DraI	TTTAAA	1 cut(s)	1086
DraIII	CACNNNGTG	1 cut(s)	164
EaeI	YGGCCR	2 cut(s)	1565, 1699
EagI	CGGCCG	1 cut(s)	1565
Eam1104I	CTCTTC	3 cut(s)	477, 832, 1695
EarI	CTCTTC	3 cut(s)	477, 832, 1695
Ecl136II	GAGCTC	1 cut(s)	1791
EclXI	CGGCCG	1 cut(s)	1565
Eco130I	CCWWGG	9 cut(s)	230, 243, 296, 704, 1299, 1764, 1803, 1998, 2340
Eco24I	GRGCYC	2 cut(s)	1793, 2340
Eco32I	GATATC	2 cut(s)	655, 1815
Eco47I	GGWCC	2 cut(s)	1593, 2507
Eco47III	AGCGCT	1 cut(s)	566
Eco52I	CGGCCG	1 cut(s)	1565
Eco53kI	GAGCTC	1 cut(s)	1791
Eco57I	CTGAAG	2 cut(s)	1392, 2522
Eco81I	CCTNAGG	1 cut(s)	2135
Eco88I	CYCGRG	1 cut(s)	683
EcoICRI	GAGCTC	1 cut(s)	1791
EcoNI	CCTNNNNNAGG	1 cut(s)	1620
EcoO109I	RGGNCCY	2 cut(s)	879, 2507
EcoRI	GAATTC	2 cut(s)	472, 1458
EcoRII	CCWGG	3 cut(s)	748, 1588, 1696
EcoRV	GATATC	2 cut(s)	655, 1815
EcoT14I	CCWWGG	9 cut(s)	230, 243, 296, 704, 1299, 1764, 1803, 1998, 2340
EcoT38I	GRGCYC	2 cut(s)	1793, 2340
ErhI	CCWWGG	9 cut(s)	230, 243, 296, 704, 1299, 1764, 1803, 1998, 2340
Esp3I	CGTCTC	1 cut(s)	1968
FalI	AAGNNNNNCTT	4 cut(s)	1569, 1601, 2142, 2174
FaqI	GGGAC	3 cut(s)	49, 2493, 2571
FauI	CCCGC	1 cut(s)	1551
FauNDI	CATATG	1 cut(s)	2126
FbaI	TGATCA	1 cut(s)	661
FblI	GTMKAC	1 cut(s)	1136
FriOI	GRGCYC	2 cut(s)	1793, 2340
FspBI	CTAG	5 cut(s)	21, 150, 459, 546, 1718
GlaI	GCGC	1 cut(s)	566
GsuI	CTGGAG	1 cut(s)	1896
HaeII	RGCGCY	1 cut(s)	568
HaeIII	GGCC	6 cut(s)	70, 881, 1542, 1567, 1701, 2133
HapII	CCGG	2 cut(s)	71, 1455
HhaI	GCGC	1 cut(s)	567
Hin6I	GCGC	1 cut(s)	565
HinP1I	GCGC	1 cut(s)	565
HindIII	AAGCTT	1 cut(s)	886
HpaII	CCGG	2 cut(s)	71, 1455
HphI	GGTGA	8 cut(s)	671, 693, 957, 996, 1520, 1765, 1827, 2483
Hpy166II	GTNNAC	4 cut(s)	413, 508, 617, 1137
Hpy8I	GTNNAC	4 cut(s)	413, 508, 617, 1137
HpyAV	CCTTC	8 cut(s)	1082, 1207, 1273, 1626, 1641, 1666, 2117, 2497
HpyCH4III	ACNGT	8 cut(s)	692, 978, 1283, 1360, 1416, 1906, 2323, 2455
HpyCH4IV	ACGT	7 cut(s)	186, 528, 1163, 1332, 1961, 2155, 2390
HpyF10VI	GCNNNNNNNGC	4 cut(s)	694, 721, 1552, 2130
HpySE526I	ACGT	7 cut(s)	186, 528, 1163, 1332, 1961, 2155, 2390
HspAI	GCGC	1 cut(s)	565
KflI	GGGWCCC	1 cut(s)	2507
Ksp22I	TGATCA	1 cut(s)	661
LmnI	GCTCC	4 cut(s)	760, 926, 1069, 2493
LweI	GCATC	8 cut(s)	145, 971, 975, 1033, 1829, 1931, 1984, 2228
MaeI	CTAG	5 cut(s)	21, 150, 459, 546, 1718
MaeII	ACGT	7 cut(s)	186, 528, 1163, 1332, 1961, 2155, 2390
MaeIII	GTNAC	5 cut(s)	529, 699, 1508, 1833, 2254
MfeI	CAATTG	2 cut(s)	903, 1557
MflI	RGATCY	3 cut(s)	1378, 1741, 1768
MhlI	GDGCHC	5 cut(s)	690, 757, 856, 1793, 2340
MlsI	TGGCCA	1 cut(s)	1701
MluNI	TGGCCA	1 cut(s)	1701
MlyI	GAGTC	7 cut(s)	728, 818, 1139, 1303, 1541, 1841, 2282
MmeI	TCCRAC	5 cut(s)	446, 1184, 1291, 1809, 2316
Mox20I	TGGCCA	1 cut(s)	1701
MroXI	GAANNNNTTC	1 cut(s)	2275
MscI	TGGCCA	1 cut(s)	1701
MseI	TTAA	9 cut(s)	123, 354, 371, 800, 1085, 2049, 2148, 2214, 2577
MslI	CAYNNNNRTG	1 cut(s)	2116
Msp20I	TGGCCA	1 cut(s)	1701
MspA1I	CMGCKG	1 cut(s)	2351
MspI	CCGG	2 cut(s)	71, 1455
MspR9I	CCNGG	3 cut(s)	750, 1590, 1698
MunI	CAATTG	2 cut(s)	903, 1557
Mva1269I	GAATGC	1 cut(s)	994
MvaI	CCWGG	3 cut(s)	750, 1590, 1698
MwoI	GCNNNNNNNGC	4 cut(s)	694, 721, 1552, 2130
NcoI	CCATGG	1 cut(s)	2340
NdeI	CATATG	1 cut(s)	2126
NlaIV	GGNNCC	9 cut(s)	689, 880, 1253, 1594, 1770, 2209, 2346, 2508, 2509
NmuCI	GTSAC	3 cut(s)	699, 1508, 1833
NspI	RCATGY	3 cut(s)	496, 728, 2522
PaeI	GCATGC	1 cut(s)	2522
PagI	TCATGA	1 cut(s)	175
PciI	ACATGT	1 cut(s)	492
PcsI	WCGNNNNNNNCGW	1 cut(s)	192
PctI	GAATGC	1 cut(s)	994
PdmI	GAANNNNTTC	1 cut(s)	2275
PfeI	GAWTC	4 cut(s)	218, 581, 1295, 2040
Ple19I	CGATCG	1 cut(s)	104
PleI	GAGTC	7 cut(s)	727, 818, 1139, 1303, 1540, 1840, 2282
PpsI	GAGTC	7 cut(s)	727, 818, 1139, 1303, 1540, 1840, 2282
Ppu21I	YACGTR	1 cut(s)	529
PpuMI	RGGWCCY	1 cut(s)	2507
PscI	ACATGT	1 cut(s)	492
Psp124BI	GAGCTC	1 cut(s)	1793
Psp1406I	AACGTT	1 cut(s)	186
Psp5II	RGGWCCY	1 cut(s)	2507
Psp6I	CCWGG	3 cut(s)	748, 1588, 1696
PspGI	CCWGG	3 cut(s)	748, 1588, 1696
PspN4I	GGNNCC	9 cut(s)	689, 880, 1253, 1594, 1770, 2209, 2346, 2508, 2509
PspPI	GGNCC	4 cut(s)	879, 1541, 1593, 2507
PspPPI	RGGWCCY	1 cut(s)	2507
PstI	CTGCAG	3 cut(s)	1402, 1671, 2488
PstNI	CAGNNNCTG	3 cut(s)	952, 982, 1235
PsuI	RGATCY	3 cut(s)	1378, 1741, 1768
PvuI	CGATCG	1 cut(s)	104
PvuII	CAGCTG	1 cut(s)	2351
RsaI	GTAC	3 cut(s)	1285, 1326, 1663
RsaNI	GTAC	3 cut(s)	1284, 1325, 1662
RseI	CAYNNNNRTG	1 cut(s)	2116
SacI	GAGCTC	1 cut(s)	1793
SaqAI	TTAA	9 cut(s)	123, 354, 371, 800, 1085, 2049, 2148, 2214, 2577
Sau96I	GGNCC	4 cut(s)	879, 1541, 1593, 2507
ScaI	AGTACT	1 cut(s)	1663
SchI	GAGTC	7 cut(s)	728, 818, 1139, 1303, 1541, 1841, 2282
ScrFI	CCNGG	3 cut(s)	750, 1590, 1698
SduI	GDGCHC	5 cut(s)	690, 757, 856, 1793, 2340
SfaNI	GCATC	8 cut(s)	145, 971, 975, 1033, 1829, 1931, 1984, 2228
SfcI	CTRYAG	4 cut(s)	930, 1398, 1667, 2484
SinI	GGWCC	2 cut(s)	1593, 2507
SmiMI	CAYNNNNRTG	1 cut(s)	2116
SmlI	CTYRAG	5 cut(s)	511, 883, 1203, 1657, 2546
SmoI	CTYRAG	5 cut(s)	511, 883, 1203, 1657, 2546
SphI	GCATGC	1 cut(s)	2522
SsiI	CCGC	2 cut(s)	1544, 1568
SspI	AATATT	2 cut(s)	136, 271
SspMI	CTAG	5 cut(s)	21, 150, 459, 546, 1718
SstI	GAGCTC	1 cut(s)	1793
StyD4I	CCNGG	3 cut(s)	748, 1588, 1696
StyI	CCWWGG	9 cut(s)	230, 243, 296, 704, 1299, 1764, 1803, 1998, 2340
TaaI	ACNGT	8 cut(s)	692, 978, 1283, 1360, 1416, 1906, 2323, 2455
TaiI	ACGT	7 cut(s)	189, 531, 1166, 1335, 1964, 2158, 2393
TaqI	TCGA	6 cut(s)	50, 276, 812, 1174, 2043, 2088
TatI	WGTACW	2 cut(s)	1283, 1661
TauI	GCSGC	1 cut(s)	1570
TfiI	GAWTC	4 cut(s)	218, 581, 1295, 2040
Tru1I	TTAA	9 cut(s)	123, 354, 371, 800, 1085, 2049, 2148, 2214, 2577
Tru9I	TTAA	9 cut(s)	123, 354, 371, 800, 1085, 2049, 2148, 2214, 2577
TscAI	CASTG	5 cut(s)	97, 322, 1236, 1920, 2328
TseFI	GTSAC	3 cut(s)	699, 1508, 1833
Tsp45I	GTSAC	3 cut(s)	699, 1508, 1833
TspDTI	ATGAA	6 cut(s)	17, 164, 764, 1608, 1932, 2550
TspGWI	ACGGA	1 cut(s)	2033
TspRI	CASTG	5 cut(s)	97, 322, 1236, 1920, 2328
VpaK11BI	GGWCC	2 cut(s)	1593, 2507
XagI	CCTNNNNNAGG	1 cut(s)	1620
XapI	RAATTY	7 cut(s)	472, 1098, 1366, 1458, 1501, 2239, 2539
XbaI	TCTAGA	1 cut(s)	1717
XceI	RCATGY	3 cut(s)	496, 728, 2522
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1174
XmiI	GTMKAC	1 cut(s)	1136
XmnI	GAANNNNTTC	1 cut(s)	2275
XspI	CTAG	5 cut(s)	21, 150, 459, 546, 1718
ZrmI	AGTACT	1 cut(s)	1663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.