Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0012144

Physical Location & Seq

Genomic Coordinates Forward (+)

14733324 .. 14739087

Gene Structure 5764 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g21160.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGGGTCAACCTCTCCCCAACCCCACTACCCTCCTCTTCTCCAAGCCATGCACCTTCCTTTTCATCCTCATCATCTGCATTCTTGGCTTCTACACTCTACATTACCCCCACGCTTCACCTTCCCATTCAAATCCCCAAACTGCCCTCCGTTTCCGCCGTAATTTCCTCTCCTCTGCCACCAACTCCACCGTCGCCGCCTACCTGAGAGCACTCACCCAACACCCCCACCTCGCCGGCACCAAACCCTCACTCGACACCATCCACTATGTCCAGTCCCACTTCTCGGGCCTGGGCCTCCAGACCCACACGGCCCACTACGACGCCCTCCTCTCCTACCCCCTCCGCTCCTCTCTCTCCGCGCATTTTAGCAACGGCAGCCATGTCGACATCCCGCTTTCCGAGCCGGGTTTTTCGGACGACGGCGTCGTCCAACCCTACCACGCCTACTCACCTTCGGGCTCGGCGCACGCTAAGGTTGTGTTCGTGAACTACGGCGGCGGCGAGGACTATCGTGCGCTGGAGGCGCTGGGGGTGAACGTCAGCGGCTGCGTGGTGATCGCCAGAAGAGGCGGCGAGTTGCCGAGAAGCGAGGCGGTTAGAAACGCCGAGAAACGCGGCGCGGTGGCCGTACTGTTGTACACCGAGGGGGATAGGAGGTTTAACAAGGGTTTTGAGAGAGGGTTTGTGATGAATGGGGTGGGGGACCCACTGAGCCCCGGGTGGGGCGGAGTTGACGGAGCTGAGAGGTTGGATTTGGACGACCCTGAGGTTTTGAAGAGGTTTCCCAATATTCCATCGTTGCCCTTGTCCGCCGAGGCCGCCGGAACCATTTTGGGCAGCCTTGGAGGGGCTCCGGCCCCGCCGGGGTGGCGGGCCGGAGTCGAGCGTGTCGGGCCGGGGCCGACTGTGGTGAACTTCACGTACGAGGGGGAGAAAAAGATGGTGACAATTCAGAATGTTTTTGCGGTCATAAAGGGGTTGGAAGAGCCTGACCGCTATGTGCTTCTTGGCAACCATAGAGATGCATGGACATATGGGGCTGTTGACCCTAACAGTGGAACTGCAGCGTTACTTGACATTGCTCGTCGATATGCTCTTCTTATTCATTCAGGTTGGAAGCCTAGGAGGACAATTATCCTTTGTAGTTGGGATGCAGAGGAATTTGGAATAGTAGGATCTACCGAGTGGGTTGAACAAAACCTTGTTAATCTCGGCTCCAAAGCTGTTGCATACCTTAATGTAGATTGTGCAGCTCAAGGGCCAGGATTCTTTGTTGGGGCGACTCCTCAGCTGGACAATCTCATTCTTGAGGTGACAAAAAAGGTCAAAGATCCTGACTTGGAGAGTTCCACTGTATACGAGAACTGGCTAGCCACAAATAGTGTCATTGATATTCAAAGACTTAGCGGAGTTGATTCAGATTTTGCTCCATTTGTACAACATGCGGGGGTTCCTTCCATTGACATCTACTATGGAAGAGATTTTCCTGTTTATCACACTGCTTTTGACTCGTATGACTGGATGACAAAGTTTGGAGATCCTTTGTTTCATCGTCATGTGGCTGTTGCTGGAATATGGGGTCTTATAGCCCTCCACCTGGCTGATGATTCAATCCTCCCTTTCAATTACTTTTCCTATGTGGATCAGTTAAAGCATTACAAAGATGTTTTGAGCCACTTGTTGGATGGGAGTACATCTCTAGATCCTCTCACAACAGCAATTGAGGAATTTGCGAATGCAGCCAGAGAAGCTGAAAATGAAGCACAGAAGCTGAGAGAGGAAGAGGGCTCAAGTGAATTTGTAATGCTGAAGAAGAGGGCTTTGAATGATCGGCTGATGCTTGCTGAAAGAGGCTTCCTGGATTCTGACGGTCTTGAAGGAAGACAGTGGTTCAAGCATCTTGTTTATGGTCCTCCTACTGATCACGGAAGCAAACTCTTTGTCTTTCCTGGAGTAGCAGATGCCATGAATCAGGCTAAGAGCATGAAAGCAGGACGGGGGCAAGCAAAACTTCGACATGAGATTTGGAGAGTTGCCAGAGCCATTCAGAGGGCTGCCAGATCCTTGAAAGGAGAAATTCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004180 GO:0004181 GO:0005575 GO:0006508 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009640 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009908 GO:0009909 GO:0010015 GO:0010051 GO:0010073 GO:0010074 GO:0010075 GO:0010080 GO:0010081 GO:0010082 GO:0010154 GO:0010305 GO:0016020 GO:0016021 GO:0016787 GO:0019538 GO:0019827 GO:0022414 GO:0022622 GO:0031224 GO:0032501 GO:0032502 GO:0040008 GO:0043170 GO:0044238 GO:0044425 GO:0048316 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0061458 GO:0065007 GO:0070011 GO:0071704 GO:0080050 GO:0090567 GO:0098727 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:2000026 GO:2000034 GO:2000241 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA Peptidase_M28 TFR_dimer

Protein Analysis

695

Amino Acids

76.14

Weight (kDa)

6.17

Isoelectric Point (pI)

36.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PA	PF02225	159 - 221	6.3e-06	PA domain
Peptidase_M28	PF04389	319 - 506	6.9e-24	Peptidase family M28
TFR_dimer	PF04253	566 - 635	1.1e-16	Transferrin receptor-like dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54720
fragaria_vesca	FvH4_6g21160 FvH4_6g21160 FvH4_6g21160
malus_domestica	MD12G1047100.v1.1 MD14G1046000.v1.1
prunus_persica	Prupe.7G088100_v2.0.a1
pyrus_communis	pycom12g04070 pycom14g03860
rosa_chinensis	RchiOBHm_Chr3g0477621
rosa_laevigata	RLG00000023705
rosa_multiflora	Rmu_sc0000775.1_g000003
rosa_roxburghii	Rroxscaffold_6G00403800
rosa_rugosa	Rorug03G0162500
rosa_samantha	Rh3AG212400 Rh3BG246100 Rh3CG239700 Rh3DG239200
rosa_wichuraiana	Rw3G019230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	422, 425
AccB1I	GGYRCC	1 cut(s)	236
AccB7I	CCANNNNNTGG	1 cut(s)	1681
AccBSI	CCGCTC	1 cut(s)	345
AccI	GTMKAC	2 cut(s)	384, 1356
AccII	CGCG	3 cut(s)	359, 615, 620
AclWI	GGATC	6 cut(s)	1183, 1325, 1532, 1650, 1697, 2055
AcoI	YGGCCR	1 cut(s)	624
AcsI	RAATTY	4 cut(s)	1160, 1727, 1796, 2076
AcuI	CTGAAG	1 cut(s)	1829
AcyI	GRCGYC	2 cut(s)	321, 423
AfaI	GTAC	5 cut(s)	630, 638, 923, 1437, 1693
AfiI	CCNNNNNNNGG	9 cut(s)	283, 721, 722, 847, 864, 1055, 1597, 1681, 2049
AjnI	CCWGG	5 cut(s)	288, 1261, 1596, 1857, 1948
AluBI	AGCT	6 cut(s)	740, 1223, 1253, 1291, 1751, 1771
AluI	AGCT	6 cut(s)	740, 1223, 1253, 1291, 1751, 1771
Alw21I	GWGCWC	1 cut(s)	211
AlwI	GGATC	6 cut(s)	1183, 1325, 1532, 1650, 1697, 2055
AlwNI	CAGNNNCTG	2 cut(s)	546, 1771
Ama87I	CYCGRG	2 cut(s)	283, 716
ApeKI	GCWGC	7 cut(s)	375, 546, 837, 1064, 1250, 1739, 2054
ApoI	RAATTY	4 cut(s)	1160, 1727, 1796, 2076
ArsI	GACNNNNNNTTYG	4 cut(s)	1926, 1958, 2007, 2039
AspA2I	CCTAGG	1 cut(s)	1121
AspLEI	GCGC	5 cut(s)	361, 466, 517, 526, 620
AsuC2I	CCSGG	5 cut(s)	405, 717, 718, 864, 897
AsuHPI	GGTGA	8 cut(s)	108, 205, 441, 544, 565, 922, 955, 1324
AsuNHI	GCTAGC	1 cut(s)	1369
AvaI	CYCGRG	2 cut(s)	283, 716
AvaII	GGWCC	2 cut(s)	703, 1910
AvrII	CCTAGG	1 cut(s)	1121
AxyI	CCTNAGG	1 cut(s)	765
BanI	GGYRCC	1 cut(s)	236
BanII	GRGCYC	4 cut(s)	461, 716, 853, 1790
BbsI	GAAGAC	1 cut(s)	1888
Bbv12I	GWGCWC	1 cut(s)	211
BbvCI	CCTCAGC	1 cut(s)	1287
BbvI	GCAGC	7 cut(s)	387, 533, 849, 1076, 1262, 1751, 2041
BccI	CCATC	4 cut(s)	266, 802, 934, 1679
BceAI	ACGGC	6 cut(s)	141, 324, 388, 436, 508, 611
BcgI	CGANNNNNNTGC	2 cut(s)	364, 398
BciT130I	CCWGG	5 cut(s)	290, 1263, 1598, 1859, 1950
BclI	TGATCA	1 cut(s)	1921
BcnI	CCSGG	5 cut(s)	405, 717, 718, 864, 897
BfaI	CTAG	3 cut(s)	1122, 1370, 1700
BfmI	CTRYAG	1 cut(s)	1062
BfoI	RGCGCY	1 cut(s)	527
BglI	GCCNNNNNGGC	1 cut(s)	868
BlnI	CCTAGG	1 cut(s)	1121
Bme18I	GGWCC	2 cut(s)	703, 1910
BmeT110I	CYCGRG	2 cut(s)	283, 716
BmiI	GGNNCC	9 cut(s)	238, 704, 705, 826, 852, 858, 900, 1216, 1452
BmsI	GCATC	5 cut(s)	1012, 1141, 1827, 1906, 1951
BmtI	GCTAGC	1 cut(s)	1373
BpiI	GAAGAC	1 cut(s)	1888
BplI	GAGNNNNNCTC	2 cut(s)	1681, 1713
BpmI	CTGGAG	3 cut(s)	281, 539, 1971
Bpu10I	CCTNAGC	2 cut(s)	471, 1287
BpuEI	CTTGAG	3 cut(s)	1239, 1328, 1774
BpuMI	CCSGG	5 cut(s)	405, 717, 718, 864, 897
BsaAI	YACGTR	1 cut(s)	921
BsaHI	GRCGYC	2 cut(s)	321, 423
BsaJI	CCNNGG	9 cut(s)	289, 642, 715, 716, 813, 841, 863, 896, 1121
Bsc4I	CCNNNNNNNGG	9 cut(s)	283, 721, 722, 847, 864, 1055, 1597, 1681, 2049
Bse118I	RCCGGY	1 cut(s)	233
Bse1I	ACTGG	3 cut(s)	271, 1370, 1523
Bse21I	CCTNAGG	1 cut(s)	765
Bse3DI	GCAATG	1 cut(s)	1077
BseBI	CCWGG	5 cut(s)	290, 1263, 1598, 1859, 1950
BseDI	CCNNGG	9 cut(s)	289, 642, 715, 716, 813, 841, 863, 896, 1121
BseGI	GGATG	6 cut(s)	63, 258, 387, 1156, 1527, 1690
BseLI	CCNNNNNNNGG	9 cut(s)	283, 721, 722, 847, 864, 1055, 1597, 1681, 2049
BseMI	GCAATG	1 cut(s)	1077
BseMII	CTCAG	6 cut(s)	194, 701, 732, 756, 1301, 1763
BseNI	ACTGG	3 cut(s)	271, 1370, 1523
BseRI	GAGGAG	5 cut(s)	23, 160, 317, 337, 1275
BseXI	GCAGC	7 cut(s)	387, 533, 849, 1076, 1262, 1751, 2041
BseYI	CCCAGC	1 cut(s)	526
BsgI	GTGCAG	1 cut(s)	1269
Bsh1236I	CGCG	3 cut(s)	359, 615, 620
BshNI	GGYRCC	1 cut(s)	236
BsiHKAI	GWGCWC	1 cut(s)	211
BsiHKCI	CYCGRG	2 cut(s)	283, 716
BsiSI	CCGG	8 cut(s)	234, 404, 717, 822, 854, 863, 876, 896
BsiWI	CGTACG	1 cut(s)	921
BslFI	GGGAC	2 cut(s)	259, 716
BslI	CCNNNNNNNGG	9 cut(s)	283, 721, 722, 847, 864, 1055, 1597, 1681, 2049
BsmFI	GGGAC	2 cut(s)	259, 716
BsmI	GAATGC	2 cut(s)	78, 1741
BsoBI	CYCGRG	2 cut(s)	283, 716
Bsp1286I	GDGCHC	5 cut(s)	211, 461, 716, 853, 1790
Bsp1407I	TGTACA	2 cut(s)	636, 1435
Bsp143I	GATC	9 cut(s)	555, 1175, 1330, 1537, 1642, 1702, 1828, 1921, 2060
BspCNI	CTCAG	6 cut(s)	195, 702, 733, 757, 1300, 1764
BspFNI	CGCG	3 cut(s)	359, 615, 620
BspLI	GGNNCC	9 cut(s)	238, 704, 705, 826, 852, 858, 900, 1216, 1452
BspMAI	CTGCAG	1 cut(s)	1066
BspOI	GCTAGC	1 cut(s)	1373
BspPI	GGATC	6 cut(s)	1183, 1325, 1532, 1650, 1697, 2055
BspQI	GCTCTTC	2 cut(s)	978, 1101
BspT107I	GGYRCC	1 cut(s)	236
BsrBI	CCGCTC	1 cut(s)	345
BsrDI	GCAATG	1 cut(s)	1077
BsrFI	RCCGGY	1 cut(s)	233
BsrGI	TGTACA	2 cut(s)	636, 1435
BsrI	ACTGG	3 cut(s)	271, 1370, 1523
BssAI	RCCGGY	1 cut(s)	233
BssECI	CCNNGG	9 cut(s)	289, 642, 715, 716, 813, 841, 863, 896, 1121
BssMI	GATC	9 cut(s)	555, 1175, 1330, 1537, 1642, 1702, 1828, 1921, 2060
BssNAI	GTATAC	1 cut(s)	1357
BssNI	GRCGYC	2 cut(s)	321, 423
BssT1I	CCWWGG	2 cut(s)	841, 1121
Bst1107I	GTATAC	1 cut(s)	1357
Bst2UI	CCWGG	5 cut(s)	290, 1263, 1598, 1859, 1950
Bst4CI	ACNGT	7 cut(s)	190, 633, 907, 1055, 1354, 1871, 1887
Bst6I	CTCTTC	8 cut(s)	41, 559, 770, 978, 1101, 1471, 1776, 1808
BstACI	GRCGYC	2 cut(s)	321, 423
BstAUI	TGTACA	2 cut(s)	636, 1435
BstBAI	YACGTR	1 cut(s)	921
BstC8I	GCNNGC	6 cut(s)	235, 468, 873, 1371, 1842, 2004
BstDEI	CTNAG	9 cut(s)	203, 471, 710, 741, 765, 1287, 1403, 1772, 1977
BstF5I	GGATG	6 cut(s)	63, 258, 387, 1156, 1527, 1690
BstFNI	CGCG	3 cut(s)	359, 615, 620
BstH2I	RGCGCY	1 cut(s)	527
BstHHI	GCGC	5 cut(s)	361, 466, 517, 526, 620
BstKTI	GATC	9 cut(s)	558, 1178, 1333, 1540, 1645, 1705, 1831, 1924, 2063
BstMBI	GATC	9 cut(s)	555, 1175, 1330, 1537, 1642, 1702, 1828, 1921, 2060
BstNI	CCWGG	5 cut(s)	290, 1263, 1598, 1859, 1950
BstNSI	RCATGY	1 cut(s)	1445
BstSFI	CTRYAG	1 cut(s)	1062
BstUI	CGCG	3 cut(s)	359, 615, 620
BstV1I	GCAGC	7 cut(s)	387, 533, 849, 1076, 1262, 1751, 2041
BstV2I	GAAGAC	1 cut(s)	1888
BstX2I	RGATCY	5 cut(s)	1175, 1330, 1537, 1702, 2060
BstYI	RGATCY	5 cut(s)	1175, 1330, 1537, 1702, 2060
BstZ17I	GTATAC	1 cut(s)	1357
Bsu36I	CCTNAGG	1 cut(s)	765
BtsCI	GGATG	6 cut(s)	63, 258, 387, 1156, 1527, 1690
BtsI	GCAGTG	1 cut(s)	1497
BtsIMutI	CAGTG	6 cut(s)	707, 1060, 1350, 1497, 1892, 2080
Cac8I	GCNNGC	6 cut(s)	235, 468, 873, 1371, 1842, 2004
CaiI	CAGNNNCTG	2 cut(s)	546, 1771
CfoI	GCGC	5 cut(s)	361, 466, 517, 526, 620
Cfr10I	RCCGGY	1 cut(s)	233
Cfr9I	CCCGGG	1 cut(s)	716
CseI	GACGC	2 cut(s)	329, 412
Csp6I	GTAC	5 cut(s)	629, 637, 922, 1436, 1692
CviAII	CATG	8 cut(s)	48, 380, 1026, 1442, 1556, 1966, 1984, 2018
CviQI	GTAC	5 cut(s)	629, 637, 922, 1436, 1692
DdeI	CTNAG	9 cut(s)	203, 471, 710, 741, 765, 1287, 1403, 1772, 1977
DpnI	GATC	9 cut(s)	557, 1177, 1332, 1539, 1644, 1704, 1830, 1923, 2062
DpnII	GATC	9 cut(s)	555, 1175, 1330, 1537, 1642, 1702, 1828, 1921, 2060
DrdI	GACNNNNNNGTC	2 cut(s)	422, 425
DseDI	GACNNNNNNGTC	2 cut(s)	422, 425
EaeI	YGGCCR	1 cut(s)	624
Eam1104I	CTCTTC	8 cut(s)	41, 559, 770, 978, 1101, 1471, 1776, 1808
EarI	CTCTTC	8 cut(s)	41, 559, 770, 978, 1101, 1471, 1776, 1808
EciI	GGCGGA	3 cut(s)	143, 741, 799
Eco130I	CCWWGG	2 cut(s)	841, 1121
Eco24I	GRGCYC	4 cut(s)	461, 716, 853, 1790
Eco47I	GGWCC	2 cut(s)	703, 1910
Eco57I	CTGAAG	1 cut(s)	1829
Eco81I	CCTNAGG	1 cut(s)	765
Eco88I	CYCGRG	2 cut(s)	283, 716
EcoO109I	RGGNCCY	1 cut(s)	703
EcoRII	CCWGG	5 cut(s)	288, 1261, 1596, 1857, 1948
EcoT14I	CCWWGG	2 cut(s)	841, 1121
EcoT22I	ATGCAT	1 cut(s)	1027
EcoT38I	GRGCYC	4 cut(s)	461, 716, 853, 1790
ErhI	CCWWGG	2 cut(s)	841, 1121
FaeI	CATG	8 cut(s)	51, 383, 1029, 1445, 1559, 1969, 1987, 2021
FalI	AAGNNNNNCTT	2 cut(s)	1995, 2027
FaqI	GGGAC	2 cut(s)	259, 716
FatI	CATG	8 cut(s)	47, 379, 1025, 1441, 1555, 1965, 1983, 2017
FauI	CCCGC	4 cut(s)	399, 864, 867, 1438
FauNDI	CATATG	1 cut(s)	1033
FbaI	TGATCA	1 cut(s)	1921
FblI	GTMKAC	2 cut(s)	384, 1356
FokI	GGATG	6 cut(s)	50, 245, 374, 1163, 1534, 1697
FriOI	GRGCYC	4 cut(s)	461, 716, 853, 1790
FspBI	CTAG	3 cut(s)	1122, 1370, 1700
GlaI	GCGC	5 cut(s)	360, 465, 516, 525, 619
GsaI	CCCAGC	1 cut(s)	530
GsuI	CTGGAG	3 cut(s)	281, 539, 1971
HaeII	RGCGCY	1 cut(s)	527
HapII	CCGG	8 cut(s)	234, 404, 717, 822, 854, 863, 876, 896
HgaI	GACGC	2 cut(s)	329, 412
HhaI	GCGC	5 cut(s)	361, 466, 517, 526, 620
Hin1I	GRCGYC	2 cut(s)	321, 423
Hin1II	CATG	8 cut(s)	51, 383, 1029, 1445, 1559, 1969, 1987, 2021
Hin6I	GCGC	5 cut(s)	359, 464, 515, 524, 618
HinP1I	GCGC	5 cut(s)	359, 464, 515, 524, 618
HincII	GTYRAC	4 cut(s)	8, 385, 733, 1045
HindII	GTYRAC	4 cut(s)	8, 385, 733, 1045
HinfI	GANTC	8 cut(s)	879, 1266, 1282, 1415, 1508, 1607, 1862, 1969
HpaII	CCGG	8 cut(s)	234, 404, 717, 822, 854, 863, 876, 896
HphI	GGTGA	8 cut(s)	108, 205, 441, 544, 565, 922, 955, 1324
Hpy166II	GTNNAC	9 cut(s)	8, 385, 487, 535, 639, 733, 913, 1045, 1357
Hpy188I	TCNGA	6 cut(s)	400, 415, 954, 1420, 1867, 2049
Hpy188III	TCNNGA	6 cut(s)	298, 484, 1307, 1334, 1700, 1874
Hpy8I	GTNNAC	9 cut(s)	8, 385, 487, 535, 639, 733, 913, 1045, 1357
Hpy99I	CGWCG	5 cut(s)	194, 323, 422, 428, 1089
HpyAV	CCTTC	5 cut(s)	64, 129, 462, 1464, 1871
HpyCH4III	ACNGT	7 cut(s)	190, 633, 907, 1055, 1354, 1871, 1887
HpyCH4IV	ACGT	2 cut(s)	537, 920
HpyCH4V	TGCA	8 cut(s)	51, 78, 1025, 1064, 1154, 1229, 1250, 1739
HpyF3I	CTNAG	9 cut(s)	203, 471, 710, 741, 765, 1287, 1403, 1772, 1977
HpySE526I	ACGT	2 cut(s)	537, 920
Hsp92I	GRCGYC	2 cut(s)	321, 423
Hsp92II	CATG	8 cut(s)	51, 383, 1029, 1445, 1559, 1969, 1987, 2021
HspAI	GCGC	5 cut(s)	359, 464, 515, 524, 618
KflI	GGGWCCC	1 cut(s)	703
KroI	GCCGGC	1 cut(s)	233
KroNI	GCCGGC	1 cut(s)	235
Ksp22I	TGATCA	1 cut(s)	1921
Kzo9I	GATC	9 cut(s)	555, 1175, 1330, 1537, 1642, 1702, 1828, 1921, 2060
LguI	GCTCTTC	2 cut(s)	978, 1101
LmnI	GCTCC	5 cut(s)	350, 737, 856, 1220, 1432
Lsp1109I	GCAGC	7 cut(s)	387, 533, 849, 1076, 1262, 1751, 2041
LweI	GCATC	5 cut(s)	1012, 1141, 1827, 1906, 1951
MaeI	CTAG	3 cut(s)	1122, 1370, 1700
MaeII	ACGT	2 cut(s)	537, 920
MaeIII	GTNAC	3 cut(s)	943, 1068, 1312
MalI	GATC	9 cut(s)	557, 1177, 1332, 1539, 1644, 1704, 1830, 1923, 2062
MbiI	CCGCTC	1 cut(s)	345
MboI	GATC	9 cut(s)	555, 1175, 1330, 1537, 1642, 1702, 1828, 1921, 2060
MfeI	CAATTG	1 cut(s)	1719
MflI	RGATCY	5 cut(s)	1175, 1330, 1537, 1702, 2060
MhlI	GDGCHC	5 cut(s)	211, 461, 716, 853, 1790
MluCI	AATT	9 cut(s)	160, 948, 1131, 1160, 1624, 1719, 1727, 1796, 2076
MlyI	GAGTC	3 cut(s)	888, 1276, 1502
MmeI	TCCRAC	5 cut(s)	454, 729, 960, 1094, 1662
Mph1103I	ATGCAT	1 cut(s)	1027
MroNI	GCCGGC	1 cut(s)	233
MseI	TTAA	4 cut(s)	660, 1206, 1236, 1649
MslI	CAYNNNNRTG	2 cut(s)	1020, 1554
MspA1I	CMGCKG	2 cut(s)	543, 1291
MspI	CCGG	8 cut(s)	234, 404, 717, 822, 854, 863, 876, 896
MunI	CAATTG	1 cut(s)	1719
Mva1269I	GAATGC	2 cut(s)	78, 1741
MvaI	CCWGG	5 cut(s)	290, 1263, 1598, 1859, 1950
MvnI	CGCG	3 cut(s)	359, 615, 620
NaeI	GCCGGC	1 cut(s)	235
NciI	CCSGG	5 cut(s)	405, 717, 718, 864, 897
NdeI	CATATG	1 cut(s)	1033
NdeII	GATC	9 cut(s)	555, 1175, 1330, 1537, 1642, 1702, 1828, 1921, 2060
NgoMIV	GCCGGC	1 cut(s)	233
NheI	GCTAGC	1 cut(s)	1369
NlaIII	CATG	8 cut(s)	51, 383, 1029, 1445, 1559, 1969, 1987, 2021
NlaIV	GGNNCC	9 cut(s)	238, 704, 705, 826, 852, 858, 900, 1216, 1452
NmeAIII	GCCGAG	5 cut(s)	440, 606, 631, 838, 1191
NmuCI	GTSAC	2 cut(s)	943, 1312
NsiI	ATGCAT	1 cut(s)	1027
NspI	RCATGY	1 cut(s)	1445
PciSI	GCTCTTC	2 cut(s)	978, 1101
PcsI	WCGNNNNNNNCGW	2 cut(s)	423, 498
PctI	GAATGC	2 cut(s)	78, 1741
PdiI	GCCGGC	1 cut(s)	235
PfeI	GAWTC	5 cut(s)	1266, 1415, 1607, 1862, 1969
Pfl23II	CGTACG	1 cut(s)	921
PflFI	GACNNNGTC	1 cut(s)	422
PflMI	CCANNNNNTGG	1 cut(s)	1681
PfoI	TCCNGGA	2 cut(s)	1857, 1948
PleI	GAGTC	3 cut(s)	887, 1276, 1502
PpsI	GAGTC	3 cut(s)	887, 1276, 1502
Ppu21I	YACGTR	1 cut(s)	921
PpuMI	RGGWCCY	1 cut(s)	703
Psp5II	RGGWCCY	1 cut(s)	703
Psp6I	CCWGG	5 cut(s)	288, 1261, 1596, 1857, 1948
PspFI	CCCAGC	1 cut(s)	526
PspGI	CCWGG	5 cut(s)	288, 1261, 1596, 1857, 1948
PspLI	CGTACG	1 cut(s)	921
PspN4I	GGNNCC	9 cut(s)	238, 704, 705, 826, 852, 858, 900, 1216, 1452
PspPPI	RGGWCCY	1 cut(s)	703
PsrI	GAACNNNNNNTAC	2 cut(s)	905, 937
PstI	CTGCAG	1 cut(s)	1066
PstNI	CAGNNNCTG	2 cut(s)	546, 1771
PsuI	RGATCY	5 cut(s)	1175, 1330, 1537, 1702, 2060
PsyI	GACNNNGTC	1 cut(s)	422
PvuII	CAGCTG	1 cut(s)	1291
RsaI	GTAC	5 cut(s)	630, 638, 923, 1437, 1693
RsaNI	GTAC	5 cut(s)	629, 637, 922, 1436, 1692
RseI	CAYNNNNRTG	2 cut(s)	1020, 1554
SalI	GTCGAC	1 cut(s)	383
SapI	GCTCTTC	2 cut(s)	978, 1101
SaqAI	TTAA	4 cut(s)	660, 1206, 1236, 1649
Sau3AI	GATC	9 cut(s)	555, 1175, 1330, 1537, 1642, 1702, 1828, 1921, 2060
SchI	GAGTC	3 cut(s)	888, 1276, 1502
SduI	GDGCHC	5 cut(s)	211, 461, 716, 853, 1790
SfaNI	GCATC	5 cut(s)	1012, 1141, 1827, 1906, 1951
SfcI	CTRYAG	1 cut(s)	1062
SinI	GGWCC	2 cut(s)	703, 1910
SmaI	CCCGGG	1 cut(s)	718
SmiMI	CAYNNNNRTG	2 cut(s)	1020, 1554
SmlI	CTYRAG	3 cut(s)	1254, 1307, 1789
SmoI	CTYRAG	3 cut(s)	1254, 1307, 1789
Sse9I	AATT	9 cut(s)	160, 948, 1131, 1160, 1624, 1719, 1727, 1796, 2076
SspI	AATATT	1 cut(s)	790
SspMI	CTAG	3 cut(s)	1122, 1370, 1700
StyI	CCWWGG	2 cut(s)	841, 1121
TaaI	ACNGT	7 cut(s)	190, 633, 907, 1055, 1354, 1871, 1887
TaiI	ACGT	2 cut(s)	540, 923
TaqI	TCGA	5 cut(s)	252, 384, 882, 1087, 2014
TasI	AATT	9 cut(s)	160, 948, 1131, 1160, 1624, 1719, 1727, 1796, 2076
TatI	WGTACW	3 cut(s)	636, 1435, 1691
TauI	GCSGC	7 cut(s)	197, 498, 501, 546, 573, 618, 821
TfiI	GAWTC	5 cut(s)	1266, 1415, 1607, 1862, 1969
Tru1I	TTAA	4 cut(s)	660, 1206, 1236, 1649
Tru9I	TTAA	4 cut(s)	660, 1206, 1236, 1649
TscAI	CASTG	5 cut(s)	714, 1060, 1357, 1504, 1892
TseFI	GTSAC	2 cut(s)	943, 1312
TseI	GCWGC	7 cut(s)	375, 546, 837, 1064, 1250, 1739, 2054
Tsp45I	GTSAC	2 cut(s)	943, 1312
TspDTI	ATGAA	7 cut(s)	52, 704, 1094, 1538, 1773, 1982, 2000
TspGWI	ACGGA	3 cut(s)	137, 750, 1941
TspMI	CCCGGG	1 cut(s)	716
TspRI	CASTG	5 cut(s)	714, 1060, 1357, 1504, 1892
Tth111I	GACNNNGTC	1 cut(s)	422
Van91I	CCANNNNNTGG	1 cut(s)	1681
VpaK11BI	GGWCC	2 cut(s)	703, 1910
XapI	RAATTY	4 cut(s)	1160, 1727, 1796, 2076
XbaI	TCTAGA	1 cut(s)	1699
XceI	RCATGY	1 cut(s)	1445
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1682
XmaI	CCCGGG	1 cut(s)	716
XmaJI	CCTAGG	1 cut(s)	1121
XmiI	GTMKAC	2 cut(s)	384, 1356
XspI	CTAG	3 cut(s)	1122, 1370, 1700
Zsp2I	ATGCAT	1 cut(s)	1027

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.