Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0012144

Physical Location & Seq

Genomic Coordinates Reverse (-)

27255421 .. 27260643

Gene Structure 5223 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023705

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGGTCAACCTCTCCTCAACCCCATCACCCTCTTCATCTCAAACCCATGCACCTCCCTTTCCATCTTCATCATCTGCATTCTGGGCTTTTATACTCTACATTACCCCCACGCTTCACCTTCCCCCTCAAATTCCCAAACTGCCCTCCGCTTCAGCCGTAGCTTCCTCTCCTCCGCCACCAACGCCACCGTCGCCGCCTACCTAAGGGCACTCACCCAACACCCCCACCTCGCCGGCACCAAACCCTCCCTCGACACCATCCACTATGTCCAGTCCCACTTCTCCGGCCTGGGCCTCCAGACCCACACGGCCCACTACAACGCCCTCCTCTCCTACCCCCTCCACTCTTCTCTCTCCGCGCATTTTAGCAACGGCAGCCACGTCGACATCCCGCTGGCCGAGCCGGGTTTGTCCCACTACGGCGGCGTCGTCCAACCCTACCACGCCTACTCGCCTTCCGGTTCGGCGCACGCTAAGGTTGTCTTCGTGAACCACGGTAGCGGCGAGGACTATCGTGCGCTTGAGGCGCTCGGGGTGGACGTTAGCGGGTGCGTGGTGATAGCGAGAAGAGGCGGCGACTTGCCGAGAGGCGAAGCGATCAGAAATGCCGAGAAGAACGGTGCGCTGGCCGTGCTATTGTACACCGAGGGGGACAGTAGGTATAACCAGGGTTTTGAGAGAGGGGTGGTGATGAATGGCGTGGGGGACCCACTGAGCCCCGGGTGGGGCGGAGTTGATGGAGCTGAAAGGTTGAATTTGGAGGACCCTGAGGTTCTGAAGAGGTTTCCCAATATTCCATCCATGCCATTGTCTGCCGAGGCGGCCGGGACCATTTTGGGAACCCTCGGCGGGGCTCTGGCGCCGCCGGAGTGGCGGGCCGGAGTCGAGCGAGTTGGGCCAGGCCCCACAGTGCTGAACTTCACTTACCAGGGGGAGAAAAAGATGGTGACAATTCAGAATGTTTTTGCTGTCATAAAGGGGTTGGAAGAGCCTGACCGCTATGTGCTTCTGGGCAACCATAGAGATGCATGGACATATGGGGCTGTTGACCCCAACAGTGGAACTGCAGCGTTACTTGACATTGCTCGTCGATATGCTCTTCTTATTCATTCAGGTTGGAATCCTAGGAGGACAATTATCCTTTGTAGTTGGGACGCAGAAGAGTTTGGAATGATAGGATCTACTGAGTGGGTTGAACAGAACCTTGTTAATCTTGGCTCCAAAGCTGTTGCCTACCTTAATGTAGATTGTGCAGCCCAAGGGCCAGGATTCTTTGTTGGGGCGACTCCTCAGCTGGACAATCTCATTCTTGAGGTGACAAAGAAGGTCAAAGATCCTGACTTGGAGGGTTCCACTGTATATGAGAACTGGCTAACCAAAAATAGTATCATTGATATTCAAAGACTTAGTGGAGTTGATTCTGATTTTGCATCATTTGTGCAACATGCCGGGGTTCCTTCCATTGACATTTACTATGGGAGAGATTTTCCTGTTTATCACACTGCTTTTGACTCCTATGACTGGATGAGAAAGTTTGGAGATCCTTTATTTCATCGTCATGTGGCTGTTGCTGGAATATGGGGACTAATAGCGCTCCACCTGGCTGATGATTCAATTCTCCCTTTCAATTACTTTTCATATGTGGATCAGTTAAAGCATTACAAAGATGTTTTGAGCCACTTGTTGGATGGGAGTATATCGCTAGATCCTCTCACAACAGCAATTGAGGAATTTGCCTATGCAGCCAGAGAAGCTGAAGATGAAGCACAGAAGCTGAGAGAGGAAGAAAGTACAAGTGAGTTTGTAATGCTGAAGAAGCGGGCTTTGAATGATCGGCTGATGCTTGCTGAAAGAGGCTTCCTGGATCCTGACGGACTTGAAGGAAGACAGTGGTTCAAGCATCTTGTTTATGGTCCTCCTTCTGATCACGGAAGCAAGCTCTTTTTCTTTCCTGGAGTAGCAGATGCTATGAATCAAGCGAAGAGCACAAAAACAGGACAAGGGCAGGCAAAACTTCGACATGAGATTTGGAGAGTTGCCAGAGCCATTCAGAGGGCTGCCAGATCCTTGAGAGGAGAAATTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004180 GO:0004181 GO:0005575 GO:0006508 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009640 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009908 GO:0009909 GO:0010015 GO:0010051 GO:0010073 GO:0010074 GO:0010075 GO:0010080 GO:0010081 GO:0010082 GO:0010154 GO:0010305 GO:0016020 GO:0016021 GO:0016787 GO:0019538 GO:0019827 GO:0022414 GO:0022622 GO:0031224 GO:0032501 GO:0032502 GO:0040008 GO:0043170 GO:0044238 GO:0044425 GO:0048316 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0061458 GO:0065007 GO:0070011 GO:0071704 GO:0080050 GO:0090567 GO:0098727 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:2000026 GO:2000034 GO:2000241 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA Peptidase_M28 TFR_dimer

Protein Analysis

696

Amino Acids

76.23

Weight (kDa)

5.97

Isoelectric Point (pI)

33.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M28	PF04389	320 - 507	1.2e-23	Peptidase family M28
TFR_dimer	PF04253	566 - 690	3e-31	Transferrin receptor-like dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54720
fragaria_vesca	FvH4_6g21160 FvH4_6g21160 FvH4_6g21160
malus_domestica	MD12G1047100.v1.1 MD14G1046000.v1.1
prunus_persica	Prupe.7G088100_v2.0.a1
pyrus_communis	pycom12g04070 pycom14g03860
rosa_chinensis	RchiOBHm_Chr3g0477621
rosa_laevigata	RLG00000023705
rosa_multiflora	Rmu_sc0000775.1_g000003
rosa_roxburghii	Rroxscaffold_6G00403800
rosa_rugosa	Rorug03G0162500
rosa_samantha	Rh3AG212400 Rh3BG246100 Rh3CG239700 Rh3DG239200
rosa_wichuraiana	Rw3G019230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	236, 859
AccB7I	CCANNNNNTGG	1 cut(s)	1684
AccI	GTMKAC	1 cut(s)	384
AccII	CGCG	1 cut(s)	359
AclWI	GGATC	8 cut(s)	1186, 1328, 1535, 1653, 1700, 1859, 1872, 2058
AcoI	YGGCCR	3 cut(s)	396, 627, 822
AcsI	RAATTY	4 cut(s)	130, 754, 1730, 2079
AcuI	CTGAAG	4 cut(s)	136, 797, 1776, 1832
AcyI	GRCGYC	2 cut(s)	426, 860
AfaI	GTAC	2 cut(s)	641, 1792
AfeI	AGCGCT	1 cut(s)	1593
AfiI	CCNNNNNNNGG	9 cut(s)	204, 724, 725, 849, 850, 1058, 1521, 1684, 2052
AgsI	TTSAA	8 cut(s)	754, 1196, 1400, 1614, 1627, 1828, 1880, 1897
AjiI	CACGTC	1 cut(s)	382
AjnI	CCWGG	8 cut(s)	288, 666, 898, 927, 1264, 1599, 1860, 1951
AluBI	AGCT	7 cut(s)	162, 743, 1226, 1294, 1754, 1774, 1939
AluI	AGCT	7 cut(s)	162, 743, 1226, 1294, 1754, 1774, 1939
Alw21I	GWGCWC	1 cut(s)	1988
AlwI	GGATC	8 cut(s)	1186, 1328, 1535, 1653, 1700, 1859, 1872, 2058
AlwNI	CAGNNNCTG	1 cut(s)	1774
Ama87I	CYCGRG	2 cut(s)	530, 719
Aor51HI	AGCGCT	1 cut(s)	1593
ApeKI	GCWGC	5 cut(s)	375, 1067, 1253, 1742, 2057
ApoI	RAATTY	4 cut(s)	130, 754, 1730, 2079
ArsI	GACNNNNNNTTYG	2 cut(s)	2010, 2042
AspA2I	CCTAGG	1 cut(s)	1124
AspLEI	GCGC	7 cut(s)	361, 469, 520, 529, 625, 862, 1594
AsuC2I	CCSGG	5 cut(s)	405, 720, 721, 826, 1450
AsuHPI	GGTGA	7 cut(s)	19, 108, 205, 568, 700, 958, 1327
AvaI	CYCGRG	2 cut(s)	530, 719
AvaII	GGWCC	4 cut(s)	706, 763, 828, 1913
AvrII	CCTAGG	1 cut(s)	1124
AxyI	CCTNAGG	2 cut(s)	203, 768
BaeGI	GKGCMC	1 cut(s)	211
BamHI	GGATCC	1 cut(s)	1864
BanI	GGYRCC	2 cut(s)	236, 859
BanII	GRGCYC	2 cut(s)	719, 856
BbsI	GAAGAC	2 cut(s)	475, 1891
Bbv12I	GWGCWC	1 cut(s)	1988
BbvCI	CCTCAGC	1 cut(s)	1290
BbvI	GCAGC	5 cut(s)	387, 1079, 1265, 1754, 2044
BccI	CCATC	7 cut(s)	32, 71, 266, 731, 805, 937, 1682
BceAI	ACGGC	5 cut(s)	141, 324, 388, 436, 614
BcgI	CGANNNNNNTGC	2 cut(s)	364, 398
BciT130I	CCWGG	8 cut(s)	290, 668, 900, 929, 1266, 1601, 1862, 1953
BclI	TGATCA	1 cut(s)	1924
BcnI	CCSGG	5 cut(s)	405, 720, 721, 826, 1450
BfaI	CTAG	2 cut(s)	1125, 1703
BfmI	CTRYAG	1 cut(s)	1065
BfoI	RGCGCY	3 cut(s)	530, 863, 1595
BglI	GCCNNNNNGGC	2 cut(s)	821, 871
BlnI	CCTAGG	1 cut(s)	1124
Bme18I	GGWCC	4 cut(s)	706, 763, 828, 1913
BmeT110I	CYCGRG	2 cut(s)	530, 719
BmgBI	CACGTC	1 cut(s)	382
BmsI	GCATC	5 cut(s)	1015, 1439, 1830, 1909, 1954
BpiI	GAAGAC	2 cut(s)	475, 1891
BpmI	CTGGAG	2 cut(s)	281, 1974
Bpu10I	CCTNAGC	2 cut(s)	474, 1290
BpuEI	CTTGAG	2 cut(s)	542, 1331
BpuMI	CCSGG	5 cut(s)	405, 720, 721, 826, 1450
BsaHI	GRCGYC	2 cut(s)	426, 860
BsaWI	WCCGGW	1 cut(s)	458
Bsc4I	CCNNNNNNNGG	9 cut(s)	204, 724, 725, 849, 850, 1058, 1521, 1684, 2052
Bse118I	RCCGGY	1 cut(s)	233
Bse1I	ACTGG	3 cut(s)	271, 1373, 1526
Bse21I	CCTNAGG	2 cut(s)	203, 768
Bse3DI	GCAATG	1 cut(s)	1080
BseBI	CCWGG	8 cut(s)	290, 668, 900, 929, 1266, 1601, 1862, 1953
BseGI	GGATG	5 cut(s)	258, 387, 797, 1530, 1693
BseLI	CCNNNNNNNGG	9 cut(s)	204, 724, 725, 849, 850, 1058, 1521, 1684, 2052
BseMI	GCAATG	1 cut(s)	1080
BseMII	CTCAG	5 cut(s)	704, 759, 1176, 1304, 1766
BseNI	ACTGG	3 cut(s)	271, 1373, 1526
BseRI	GAGGAG	5 cut(s)	5, 160, 317, 1278, 2088
BseSI	GKGCMC	1 cut(s)	211
BseX3I	CGGCCG	1 cut(s)	822
BseXI	GCAGC	5 cut(s)	387, 1079, 1265, 1754, 2044
BsgI	GTGCAG	1 cut(s)	1272
Bsh1236I	CGCG	1 cut(s)	359
Bsh1285I	CGRYCG	1 cut(s)	825
BshNI	GGYRCC	2 cut(s)	236, 859
BsiEI	CGRYCG	1 cut(s)	825
BsiHKAI	GWGCWC	1 cut(s)	1988
BsiHKCI	CYCGRG	2 cut(s)	530, 719
BsiSI	CCGG	9 cut(s)	234, 285, 404, 459, 720, 825, 866, 879, 1449
BslFI	GGGAC	7 cut(s)	259, 397, 665, 719, 841, 1166, 1596
BslI	CCNNNNNNNGG	9 cut(s)	204, 724, 725, 849, 850, 1058, 1521, 1684, 2052
BsmFI	GGGAC	7 cut(s)	259, 397, 665, 719, 841, 1166, 1596
BsmI	GAATGC	1 cut(s)	78
BsoBI	CYCGRG	2 cut(s)	530, 719
Bsp1286I	GDGCHC	4 cut(s)	211, 719, 856, 1988
Bsp1407I	TGTACA	1 cut(s)	639
BspCNI	CTCAG	5 cut(s)	705, 760, 1177, 1303, 1767
BspFNI	CGCG	1 cut(s)	359
BspMAI	CTGCAG	1 cut(s)	1069
BspPI	GGATC	8 cut(s)	1186, 1328, 1535, 1653, 1700, 1859, 1872, 2058
BspQI	GCTCTTC	3 cut(s)	981, 1104, 1976
BspT107I	GGYRCC	2 cut(s)	236, 859
BsrDI	GCAATG	1 cut(s)	1080
BsrFI	RCCGGY	1 cut(s)	233
BsrGI	TGTACA	1 cut(s)	639
BsrI	ACTGG	3 cut(s)	271, 1373, 1526
BssAI	RCCGGY	1 cut(s)	233
BssNI	GRCGYC	2 cut(s)	426, 860
BssT1I	CCWWGG	2 cut(s)	1124, 1258
Bst2UI	CCWGG	8 cut(s)	290, 668, 900, 929, 1266, 1601, 1862, 1953
Bst4CI	ACNGT	8 cut(s)	190, 497, 620, 656, 910, 1058, 1357, 1890
Bst6I	CTCTTC	8 cut(s)	38, 352, 562, 773, 981, 1104, 1155, 1976
BstACI	GRCGYC	2 cut(s)	426, 860
BstAUI	TGTACA	1 cut(s)	639
BstC8I	GCNNGC	9 cut(s)	235, 396, 471, 627, 876, 1821, 1845, 1937, 2007
BstDEI	CTNAG	8 cut(s)	203, 474, 713, 768, 1185, 1290, 1406, 1775
BstDSI	CCRYGG	1 cut(s)	493
BstENI	CCTNNNNNAGG	1 cut(s)	202
BstF5I	GGATG	5 cut(s)	258, 387, 797, 1530, 1693
BstFNI	CGCG	1 cut(s)	359
BstH2I	RGCGCY	3 cut(s)	530, 863, 1595
BstHHI	GCGC	7 cut(s)	361, 469, 520, 529, 625, 862, 1594
BstMCI	CGRYCG	1 cut(s)	825
BstNI	CCWGG	8 cut(s)	290, 668, 900, 929, 1266, 1601, 1862, 1953
BstNSI	RCATGY	1 cut(s)	1448
BstSFI	CTRYAG	1 cut(s)	1065
BstSLI	GKGCMC	1 cut(s)	211
BstUI	CGCG	1 cut(s)	359
BstV1I	GCAGC	5 cut(s)	387, 1079, 1265, 1754, 2044
BstV2I	GAAGAC	2 cut(s)	475, 1891
BstX2I	RGATCY	6 cut(s)	1178, 1333, 1540, 1705, 1864, 2063
BstYI	RGATCY	6 cut(s)	1178, 1333, 1540, 1705, 1864, 2063
BstZI	CGGCCG	1 cut(s)	822
Bsu36I	CCTNAGG	2 cut(s)	203, 768
BtgI	CCRYGG	1 cut(s)	493
BtrI	CACGTC	1 cut(s)	382
BtsCI	GGATG	5 cut(s)	258, 387, 797, 1530, 1693
BtsI	GCAGTG	1 cut(s)	1500
BtsIMutI	CAGTG	6 cut(s)	710, 915, 1063, 1353, 1500, 1895
Cac8I	GCNNGC	9 cut(s)	235, 396, 471, 627, 876, 1821, 1845, 1937, 2007
CaiI	CAGNNNCTG	1 cut(s)	1774
CfoI	GCGC	7 cut(s)	361, 469, 520, 529, 625, 862, 1594
Cfr10I	RCCGGY	1 cut(s)	233
Cfr9I	CCCGGG	1 cut(s)	719
CseI	GACGC	2 cut(s)	415, 1163
Csp6I	GTAC	2 cut(s)	640, 1791
CviAII	CATG	6 cut(s)	48, 802, 1029, 1445, 1559, 2021
CviQI	GTAC	2 cut(s)	640, 1791
DdeI	CTNAG	8 cut(s)	203, 474, 713, 768, 1185, 1290, 1406, 1775
DinI	GGCGCC	1 cut(s)	861
EaeI	YGGCCR	3 cut(s)	396, 627, 822
EagI	CGGCCG	1 cut(s)	822
Eam1104I	CTCTTC	8 cut(s)	38, 352, 562, 773, 981, 1104, 1155, 1976
EarI	CTCTTC	8 cut(s)	38, 352, 562, 773, 981, 1104, 1155, 1976
EciI	GGCGGA	2 cut(s)	163, 744
EclXI	CGGCCG	1 cut(s)	822
Eco130I	CCWWGG	2 cut(s)	1124, 1258
Eco24I	GRGCYC	2 cut(s)	719, 856
Eco47I	GGWCC	4 cut(s)	706, 763, 828, 1913
Eco47III	AGCGCT	1 cut(s)	1593
Eco52I	CGGCCG	1 cut(s)	822
Eco57I	CTGAAG	4 cut(s)	136, 797, 1776, 1832
Eco81I	CCTNAGG	2 cut(s)	203, 768
Eco88I	CYCGRG	2 cut(s)	530, 719
EcoNI	CCTNNNNNAGG	1 cut(s)	202
EcoO109I	RGGNCCY	3 cut(s)	706, 763, 902
EcoRII	CCWGG	8 cut(s)	288, 666, 898, 927, 1264, 1599, 1860, 1951
EcoT14I	CCWWGG	2 cut(s)	1124, 1258
EcoT22I	ATGCAT	1 cut(s)	1030
EcoT38I	GRGCYC	2 cut(s)	719, 856
EgeI	GGCGCC	1 cut(s)	861
EheI	GGCGCC	1 cut(s)	861
ErhI	CCWWGG	2 cut(s)	1124, 1258
FaeI	CATG	6 cut(s)	51, 805, 1032, 1448, 1562, 2024
FalI	AAGNNNNNCTT	2 cut(s)	467, 499
FaqI	GGGAC	7 cut(s)	259, 397, 665, 719, 841, 1166, 1596
FatI	CATG	6 cut(s)	47, 801, 1028, 1444, 1558, 2020
FauI	CCCGC	5 cut(s)	399, 539, 842, 867, 1812
FauNDI	CATATG	2 cut(s)	1036, 1639
FbaI	TGATCA	1 cut(s)	1924
FblI	GTMKAC	1 cut(s)	384
FokI	GGATG	5 cut(s)	245, 374, 784, 1537, 1700
FriOI	GRGCYC	2 cut(s)	719, 856
FspBI	CTAG	2 cut(s)	1125, 1703
GlaI	GCGC	7 cut(s)	360, 468, 519, 528, 624, 861, 1593
GsuI	CTGGAG	2 cut(s)	281, 1974
HaeII	RGCGCY	3 cut(s)	530, 863, 1595
HapII	CCGG	9 cut(s)	234, 285, 404, 459, 720, 825, 866, 879, 1449
HgaI	GACGC	2 cut(s)	415, 1163
HhaI	GCGC	7 cut(s)	361, 469, 520, 529, 625, 862, 1594
Hin1I	GRCGYC	2 cut(s)	426, 860
Hin1II	CATG	6 cut(s)	51, 805, 1032, 1448, 1562, 2024
Hin6I	GCGC	7 cut(s)	359, 467, 518, 527, 623, 860, 1592
HinP1I	GCGC	7 cut(s)	359, 467, 518, 527, 623, 860, 1592
HincII	GTYRAC	3 cut(s)	8, 385, 1048
HindII	GTYRAC	3 cut(s)	8, 385, 1048
HinfI	GANTC	8 cut(s)	882, 1120, 1269, 1285, 1418, 1511, 1610, 1972
HpaII	CCGG	9 cut(s)	234, 285, 404, 459, 720, 825, 866, 879, 1449
HphI	GGTGA	7 cut(s)	19, 108, 205, 568, 700, 958, 1327
Hpy166II	GTNNAC	6 cut(s)	8, 385, 490, 538, 642, 1048
Hpy188I	TCNGA	6 cut(s)	602, 777, 957, 1423, 1924, 2052
Hpy188III	TCNNGA	5 cut(s)	298, 487, 1310, 1337, 1868
Hpy8I	GTNNAC	6 cut(s)	8, 385, 490, 538, 642, 1048
Hpy99I	CGWCG	4 cut(s)	194, 386, 431, 1092
HpyAV	CCTTC	6 cut(s)	129, 465, 1318, 1467, 1874, 1929
HpyCH4III	ACNGT	8 cut(s)	190, 497, 620, 656, 910, 1058, 1357, 1890
HpyCH4IV	ACGT	2 cut(s)	381, 540
HpyCH4V	TGCA	8 cut(s)	51, 78, 1028, 1067, 1253, 1430, 1441, 1742
HpyF3I	CTNAG	8 cut(s)	203, 474, 713, 768, 1185, 1290, 1406, 1775
HpySE526I	ACGT	2 cut(s)	381, 540
Hsp92I	GRCGYC	2 cut(s)	426, 860
Hsp92II	CATG	6 cut(s)	51, 805, 1032, 1448, 1562, 2024
HspAI	GCGC	7 cut(s)	359, 467, 518, 527, 623, 860, 1592
KasI	GGCGCC	1 cut(s)	859
KflI	GGGWCCC	1 cut(s)	706
KroI	GCCGGC	1 cut(s)	233
KroNI	GCCGGC	1 cut(s)	235
Ksp22I	TGATCA	1 cut(s)	1924
LguI	GCTCTTC	3 cut(s)	981, 1104, 1976
LmnI	GCTCC	3 cut(s)	740, 1223, 1599
Lsp1109I	GCAGC	5 cut(s)	387, 1079, 1265, 1754, 2044
LweI	GCATC	5 cut(s)	1015, 1439, 1830, 1909, 1954
MaeI	CTAG	2 cut(s)	1125, 1703
MaeII	ACGT	2 cut(s)	381, 540
MaeIII	GTNAC	3 cut(s)	946, 1071, 1315
MfeI	CAATTG	1 cut(s)	1722
MflI	RGATCY	6 cut(s)	1178, 1333, 1540, 1705, 1864, 2063
MhlI	GDGCHC	4 cut(s)	211, 719, 856, 1988
MluCI	AATT	9 cut(s)	130, 754, 951, 1134, 1614, 1627, 1722, 1730, 2079
Mly113I	GGCGCC	1 cut(s)	860
MlyI	GAGTC	3 cut(s)	891, 1279, 1505
MmeI	TCCRAC	4 cut(s)	457, 963, 1097, 1665
Mph1103I	ATGCAT	1 cut(s)	1030
MroNI	GCCGGC	1 cut(s)	233
MseI	TTAA	3 cut(s)	1209, 1239, 1652
MslI	CAYNNNNRTG	2 cut(s)	1023, 1557
MspA1I	CMGCKG	2 cut(s)	394, 1294
MspI	CCGG	9 cut(s)	234, 285, 404, 459, 720, 825, 866, 879, 1449
MunI	CAATTG	1 cut(s)	1722
Mva1269I	GAATGC	1 cut(s)	78
MvaI	CCWGG	8 cut(s)	290, 668, 900, 929, 1266, 1601, 1862, 1953
MvnI	CGCG	1 cut(s)	359
NaeI	GCCGGC	1 cut(s)	235
NarI	GGCGCC	1 cut(s)	860
NciI	CCSGG	5 cut(s)	405, 720, 721, 826, 1450
NdeI	CATATG	2 cut(s)	1036, 1639
NgoMIV	GCCGGC	1 cut(s)	233
NlaIII	CATG	6 cut(s)	51, 805, 1032, 1448, 1562, 2024
NmeAIII	GCCGAG	5 cut(s)	424, 609, 634, 825, 841
NmuCI	GTSAC	2 cut(s)	946, 1315
NsiI	ATGCAT	1 cut(s)	1030
NspI	RCATGY	1 cut(s)	1448
PciSI	GCTCTTC	3 cut(s)	981, 1104, 1976
PcsI	WCGNNNNNNNCGW	4 cut(s)	378, 426, 501, 537
PctI	GAATGC	1 cut(s)	78
PdiI	GCCGGC	1 cut(s)	235
PfeI	GAWTC	5 cut(s)	1120, 1269, 1418, 1610, 1972
PflMI	CCANNNNNTGG	1 cut(s)	1684
PfoI	TCCNGGA	2 cut(s)	1860, 1951
PleI	GAGTC	3 cut(s)	890, 1279, 1505
PluTI	GGCGCC	1 cut(s)	863
PpsI	GAGTC	3 cut(s)	890, 1279, 1505
PpuMI	RGGWCCY	2 cut(s)	706, 763
Psp5II	RGGWCCY	2 cut(s)	706, 763
Psp6I	CCWGG	8 cut(s)	288, 666, 898, 927, 1264, 1599, 1860, 1951
PspGI	CCWGG	8 cut(s)	288, 666, 898, 927, 1264, 1599, 1860, 1951
PspPPI	RGGWCCY	2 cut(s)	706, 763
PsrI	GAACNNNNNNTAC	2 cut(s)	908, 940
PstI	CTGCAG	1 cut(s)	1069
PstNI	CAGNNNCTG	1 cut(s)	1774
PsuI	RGATCY	6 cut(s)	1178, 1333, 1540, 1705, 1864, 2063
PvuII	CAGCTG	1 cut(s)	1294
RsaI	GTAC	2 cut(s)	641, 1792
RsaNI	GTAC	2 cut(s)	640, 1791
RseI	CAYNNNNRTG	2 cut(s)	1023, 1557
SalI	GTCGAC	1 cut(s)	383
SapI	GCTCTTC	3 cut(s)	981, 1104, 1976
SaqAI	TTAA	3 cut(s)	1209, 1239, 1652
SchI	GAGTC	3 cut(s)	891, 1279, 1505
SduI	GDGCHC	4 cut(s)	211, 719, 856, 1988
SfaNI	GCATC	5 cut(s)	1015, 1439, 1830, 1909, 1954
SfcI	CTRYAG	1 cut(s)	1065
SfoI	GGCGCC	1 cut(s)	861
SinI	GGWCC	4 cut(s)	706, 763, 828, 1913
SmaI	CCCGGG	1 cut(s)	721
SmiMI	CAYNNNNRTG	2 cut(s)	1023, 1557
SmlI	CTYRAG	3 cut(s)	521, 1310, 2068
SmoI	CTYRAG	3 cut(s)	521, 1310, 2068
Sse9I	AATT	9 cut(s)	130, 754, 951, 1134, 1614, 1627, 1722, 1730, 2079
SspDI	GGCGCC	1 cut(s)	859
SspI	AATATT	1 cut(s)	793
SspMI	CTAG	2 cut(s)	1125, 1703
StyI	CCWWGG	2 cut(s)	1124, 1258
TaaI	ACNGT	8 cut(s)	190, 497, 620, 656, 910, 1058, 1357, 1890
TaiI	ACGT	2 cut(s)	384, 543
TaqI	TCGA	5 cut(s)	252, 384, 885, 1090, 2017
TasI	AATT	9 cut(s)	130, 754, 951, 1134, 1614, 1627, 1722, 1730, 2079
TatI	WGTACW	2 cut(s)	639, 1790
TauI	GCSGC	6 cut(s)	197, 426, 504, 576, 824, 865
TfiI	GAWTC	5 cut(s)	1120, 1269, 1418, 1610, 1972
Tru1I	TTAA	3 cut(s)	1209, 1239, 1652
Tru9I	TTAA	3 cut(s)	1209, 1239, 1652
TscAI	CASTG	6 cut(s)	717, 915, 1063, 1360, 1507, 1895
TseFI	GTSAC	2 cut(s)	946, 1315
TseI	GCWGC	5 cut(s)	375, 1067, 1253, 1742, 2057
Tsp45I	GTSAC	2 cut(s)	946, 1315
TspDTI	ATGAA	8 cut(s)	25, 58, 707, 1097, 1541, 1626, 1776, 1985
TspGWI	ACGGA	2 cut(s)	1887, 1944
TspMI	CCCGGG	1 cut(s)	719
TspRI	CASTG	6 cut(s)	717, 915, 1063, 1360, 1507, 1895
Van91I	CCANNNNNTGG	1 cut(s)	1684
VpaK11BI	GGWCC	4 cut(s)	706, 763, 828, 1913
XagI	CCTNNNNNAGG	1 cut(s)	202
XapI	RAATTY	4 cut(s)	130, 754, 1730, 2079
XceI	RCATGY	1 cut(s)	1448
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1685
XmaI	CCCGGG	1 cut(s)	719
XmaJI	CCTAGG	1 cut(s)	1124
XmiI	GTMKAC	1 cut(s)	384
XspI	CTAG	2 cut(s)	1125, 1703
Zsp2I	ATGCAT	1 cut(s)	1030

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.