Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0012144

Physical Location & Seq

Genomic Coordinates Forward (+)

21425177 .. 21430921

Gene Structure 5745 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG212400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGGGTCAACCTCTCCTCAACCCCATCACCCTCTTCATCTCAAACCCATGCATCTCCTCCCTTTCCATCTTCATCATCTGCATTCTGGGCTTTTATACTCTACATTACCCCCACGCTTCACCTTCCCCCTCAAATTCCCAAACTGCCCTCCGCTTCCGCCGTAGCTTCCTCTCCTCCGCCACCAACGCCACCGTCGCCGCCTACCTAAGGGCACTCACCCAACACCCCCACCTCGCCGGCACCAAACCCTCCCTCGACACCATCCACTATGTCCAGTCCCACCTCTCCGGCCTGGGCCTCCAGACCCACACGGCCCACTACAACGCCCTCCTCTCCTACCCCCTCCACTCTTCTCTCTCCGCGCATTTTAGCAACGGCAGCCACGTCGACATCCCGCTGGCCGAGCCGGGTTTGTCCCACGACGGCGGCGGCGGCGTCGTCCAACCGTACCACGCCTACTCGCCTTCCGGTTCGGCGCACGCTAAGGTTGTCTTCGTGAACCACGGTAGCGGCGAGGACTACCGTGCGCTTGAGGCGCTCGGGGTGAACGTTAGCGGGTGCGTGGTGATAGCGAGAAGAGGCGGCGACTTGCCGAGAGGCGAAGCGATCAGAAATGCCGAGAAGAACGGTGCGCTGGCCGTGCTATTGTACACCGAGGGCGACAGTAGGTATAACCAGGGTTTTGAGAGAGGGGTGGTGATGAATGGCGTGGGGGACCCACTGACCCCGGGGTGGGGCGGAGTTGATGGAGCTGAAAGGTTGGATTTGGAGGACCCTGAGGTTCTGAAGAGGTTTCCCAATATTCCATCCATGCCATTGTCTGCCGAGGCGGCCGGGACCATTTTGGGAACCCTCGGCGGGGCTCCGACCCCGCCTGAGTGGCGGGCCGGAGTCAAGCGAGTTGGGCCAGGCCCGACAGTGCTGAACTTCACTTACCAGGGGGAGAAAAAGATGGTGACCATTCAGAATGTTTTTGCTGTCATAAAGGGGTTGGAAGAGCCTGACCGCTATGTGCTTCTTGGCAACCATAGAGATGCATGGACATATGGGGCTGTTGACCCCAACAGTGGAACTGCCGCGTTACTTGACATTGCTCGTCGATATGCTCTTCTTATTCATTCAGGTTGGAATCCTAGGAGGACAATTATCCTTTGTAGTTGGGATGCAGAAGAGTTTGGAATGATAGGATCTACCGAGTGGGTTGAACAAAACCTTGTTAATCTTGGCTCCAAAGCTGTTGCCTACCTTAATGTAGATTGTGCAGCCCAAGGGCCAGGATTCTTTGTTGGGGCGACTCCTCAGCTGGACAATCTCATTCTTGAGGTGACAAAGAAGGTCAAAGATCCTGACTTGGAGGGTTCCACTGTTTATGAGAACTGGCTAACCAAAAATGGTATCATTGATATTCAAAGACTTGGTGGAGTTGATTCTGATTTTGCATCATTTGTGCAACATGCCGGGGTTCCTTCCATTGACATTTACTATGGGAGAGATTTTCCTGTTTATCACACTGCTTTTGACTCCTATGACTGGATGAGAGAGTTTGGAGATCCTTTATTTCATCGTCATGTGGCTGTTGCTGGAATATGGGGGCTAATAGCGCTCCACCTGGCTGATGATTCAATTCTCCCTTTCAATTACTTTTCATATGTGGATCAGTTAAAGCACTACAAAGATGTTTTGAGCCACTTGTTGGATGGGAGTATATCGCTAGATCCTCTCACAACAGCAATTGAGGAATTTGCCTATGCAGCCAAAGAAGCTGAAGATGAAGCACAGAAGCTGAGAGAGGAAGAAAGTACAAGTGAGTTTGTAATGCTGAAGAAGCGGGCTTTGAATGATCGGCTGATGCTTGCTGAAAGAGGCTTCCTGGATTCTGATGGACTTGAAGGAAGACAGTGGTTCAAGCATCTTGTGAGCATATTTTCCCTTTCCTTGGTTTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004180 GO:0004181 GO:0005575 GO:0006508 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009640 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009908 GO:0009909 GO:0010015 GO:0010051 GO:0010073 GO:0010074 GO:0010075 GO:0010080 GO:0010081 GO:0010082 GO:0010154 GO:0010305 GO:0016020 GO:0016021 GO:0016787 GO:0019538 GO:0019827 GO:0022414 GO:0022622 GO:0031224 GO:0032501 GO:0032502 GO:0040008 GO:0043170 GO:0044238 GO:0044425 GO:0048316 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0061458 GO:0065007 GO:0070011 GO:0071704 GO:0080050 GO:0090567 GO:0098727 GO:0099402 GO:0140096 GO:1901564 GO:1905392 GO:2000026 GO:2000034 GO:2000241 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA Peptidase_M28 TFR_dimer

Protein Analysis

648

Amino Acids

70.82

Weight (kDa)

5.59

Isoelectric Point (pI)

33.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M28	PF04389	323 - 510	1.1e-23	Peptidase family M28
TFR_dimer	PF04253	569 - 640	1.2e-16	Transferrin receptor-like dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012144)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54720
fragaria_vesca	FvH4_6g21160 FvH4_6g21160 FvH4_6g21160
malus_domestica	MD12G1047100.v1.1 MD14G1046000.v1.1
prunus_persica	Prupe.7G088100_v2.0.a1
pyrus_communis	pycom12g04070 pycom14g03860
rosa_chinensis	RchiOBHm_Chr3g0477621
rosa_laevigata	RLG00000023705
rosa_multiflora	Rmu_sc0000775.1_g000003
rosa_roxburghii	Rroxscaffold_6G00403800
rosa_rugosa	Rorug03G0162500
rosa_samantha	Rh3AG212400 Rh3BG246100 Rh3CG239700 Rh3DG239200
rosa_wichuraiana	Rw3G019230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	239
AccB7I	CCANNNNNTGG	1 cut(s)	1693
AccI	GTMKAC	1 cut(s)	387
AccII	CGCG	2 cut(s)	362, 1079
AclI	AACGTT	1 cut(s)	549
AclWI	GGATC	5 cut(s)	1195, 1337, 1544, 1662, 1709
AcoI	YGGCCR	3 cut(s)	399, 636, 831
AcsI	RAATTY	2 cut(s)	133, 1739
AcuI	CTGAAG	3 cut(s)	806, 1785, 1841
AcyI	GRCGYC	1 cut(s)	435
AfaI	GTAC	3 cut(s)	449, 650, 1801
AfeI	AGCGCT	1 cut(s)	1602
AgsI	TTSAA	7 cut(s)	1205, 1409, 1623, 1636, 1837, 1889, 1906
AjiI	CACGTC	1 cut(s)	385
AjnI	CCWGG	7 cut(s)	291, 675, 907, 936, 1273, 1608, 1869
AluBI	AGCT	6 cut(s)	165, 752, 1235, 1303, 1763, 1783
AluI	AGCT	6 cut(s)	165, 752, 1235, 1303, 1763, 1783
AlwI	GGATC	5 cut(s)	1195, 1337, 1544, 1662, 1709
AlwNI	CAGNNNCTG	1 cut(s)	1783
Ama87I	CYCGRG	2 cut(s)	539, 727
Aor51HI	AGCGCT	1 cut(s)	1602
ApeKI	GCWGC	3 cut(s)	378, 1262, 1751
ApoI	RAATTY	2 cut(s)	133, 1739
AspA2I	CCTAGG	1 cut(s)	1133
AspLEI	GCGC	6 cut(s)	364, 478, 529, 538, 634, 1603
AspS9I	GGNCC	9 cut(s)	295, 313, 715, 772, 837, 885, 905, 911, 1271
AsuC2I	CCSGG	5 cut(s)	408, 728, 729, 835, 1459
AsuHPI	GGTGA	8 cut(s)	19, 111, 208, 556, 577, 709, 967, 1336
AvaI	CYCGRG	2 cut(s)	539, 727
AvaII	GGWCC	3 cut(s)	715, 772, 837
AvrII	CCTAGG	1 cut(s)	1133
AxyI	CCTNAGG	2 cut(s)	206, 777
BaeGI	GKGCMC	1 cut(s)	214
BanI	GGYRCC	1 cut(s)	239
BanII	GRGCYC	1 cut(s)	865
BbsI	GAAGAC	2 cut(s)	484, 1900
BbvCI	CCTCAGC	1 cut(s)	1299
BbvI	GCAGC	3 cut(s)	390, 1274, 1763
BccI	CCATC	8 cut(s)	32, 74, 269, 740, 814, 946, 1691, 1874
BceAI	ACGGC	5 cut(s)	144, 327, 391, 439, 623
BcgI	CGANNNNNNTGC	2 cut(s)	367, 401
BciT130I	CCWGG	7 cut(s)	293, 677, 909, 938, 1275, 1610, 1871
BcnI	CCSGG	5 cut(s)	408, 728, 729, 835, 1459
BfaI	CTAG	2 cut(s)	1134, 1712
BfoI	RGCGCY	2 cut(s)	539, 1604
BglI	GCCNNNNNGGC	2 cut(s)	830, 880
BlnI	CCTAGG	1 cut(s)	1133
Bme18I	GGWCC	3 cut(s)	715, 772, 837
BmeT110I	CYCGRG	2 cut(s)	539, 727
BmgBI	CACGTC	1 cut(s)	385
BmgT120I	GGNCC	9 cut(s)	295, 313, 715, 772, 837, 885, 905, 911, 1271
BmsI	GCATC	6 cut(s)	60, 1024, 1153, 1448, 1839, 1918
BpiI	GAAGAC	2 cut(s)	484, 1900
BpmI	CTGGAG	1 cut(s)	284
Bpu10I	CCTNAGC	2 cut(s)	483, 1299
BpuEI	CTTGAG	2 cut(s)	551, 1340
BpuMI	CCSGG	5 cut(s)	408, 728, 729, 835, 1459
BsaHI	GRCGYC	1 cut(s)	435
BsaWI	WCCGGW	1 cut(s)	467
Bse118I	RCCGGY	1 cut(s)	236
Bse1I	ACTGG	3 cut(s)	274, 1382, 1535
Bse21I	CCTNAGG	2 cut(s)	206, 777
Bse3DI	GCAATG	1 cut(s)	1089
BseBI	CCWGG	7 cut(s)	293, 677, 909, 938, 1275, 1610, 1871
BseGI	GGATG	6 cut(s)	261, 390, 806, 1168, 1539, 1702
BseMI	GCAATG	1 cut(s)	1089
BseMII	CTCAG	4 cut(s)	768, 867, 1313, 1775
BseNI	ACTGG	3 cut(s)	274, 1382, 1535
BseRI	GAGGAG	5 cut(s)	5, 46, 163, 320, 1287
BseSI	GKGCMC	1 cut(s)	214
BseX3I	CGGCCG	1 cut(s)	831
BseXI	GCAGC	3 cut(s)	390, 1274, 1763
BsgI	GTGCAG	1 cut(s)	1281
Bsh1236I	CGCG	2 cut(s)	362, 1079
Bsh1285I	CGRYCG	1 cut(s)	834
BshNI	GGYRCC	1 cut(s)	239
BsiEI	CGRYCG	1 cut(s)	834
BsiHKCI	CYCGRG	2 cut(s)	539, 727
BsiSI	CCGG	8 cut(s)	237, 288, 407, 468, 728, 834, 888, 1458
BslFI	GGGAC	4 cut(s)	262, 400, 728, 850
BsmFI	GGGAC	4 cut(s)	262, 400, 728, 850
BsmI	GAATGC	1 cut(s)	81
BsoBI	CYCGRG	2 cut(s)	539, 727
Bsp1286I	GDGCHC	2 cut(s)	214, 865
Bsp1407I	TGTACA	1 cut(s)	648
Bsp143I	GATC	7 cut(s)	606, 1187, 1342, 1549, 1654, 1714, 1840
BspCNI	CTCAG	4 cut(s)	769, 868, 1312, 1776
BspFNI	CGCG	2 cut(s)	362, 1079
BspPI	GGATC	5 cut(s)	1195, 1337, 1544, 1662, 1709
BspQI	GCTCTTC	2 cut(s)	990, 1113
BspT107I	GGYRCC	1 cut(s)	239
BsrDI	GCAATG	1 cut(s)	1089
BsrFI	RCCGGY	1 cut(s)	236
BsrGI	TGTACA	1 cut(s)	648
BsrI	ACTGG	3 cut(s)	274, 1382, 1535
BssAI	RCCGGY	1 cut(s)	236
BssMI	GATC	7 cut(s)	606, 1187, 1342, 1549, 1654, 1714, 1840
BssNI	GRCGYC	1 cut(s)	435
BssT1I	CCWWGG	3 cut(s)	1133, 1267, 1935
Bst2UI	CCWGG	7 cut(s)	293, 677, 909, 938, 1275, 1610, 1871
Bst6I	CTCTTC	7 cut(s)	38, 355, 571, 782, 990, 1113, 1164
BstACI	GRCGYC	1 cut(s)	435
BstAUI	TGTACA	1 cut(s)	648
BstC8I	GCNNGC	7 cut(s)	238, 399, 480, 636, 885, 1830, 1854
BstDEI	CTNAG	6 cut(s)	206, 483, 777, 876, 1299, 1784
BstDSI	CCRYGG	1 cut(s)	502
BstEII	GGTNACC	1 cut(s)	955
BstENI	CCTNNNNNAGG	1 cut(s)	205
BstF5I	GGATG	6 cut(s)	261, 390, 806, 1168, 1539, 1702
BstFNI	CGCG	2 cut(s)	362, 1079
BstH2I	RGCGCY	2 cut(s)	539, 1604
BstHHI	GCGC	6 cut(s)	364, 478, 529, 538, 634, 1603
BstKTI	GATC	7 cut(s)	609, 1190, 1345, 1552, 1657, 1717, 1843
BstMBI	GATC	7 cut(s)	606, 1187, 1342, 1549, 1654, 1714, 1840
BstMCI	CGRYCG	1 cut(s)	834
BstNI	CCWGG	7 cut(s)	293, 677, 909, 938, 1275, 1610, 1871
BstNSI	RCATGY	1 cut(s)	1457
BstPI	GGTNACC	1 cut(s)	955
BstSLI	GKGCMC	1 cut(s)	214
BstUI	CGCG	2 cut(s)	362, 1079
BstV1I	GCAGC	3 cut(s)	390, 1274, 1763
BstV2I	GAAGAC	2 cut(s)	484, 1900
BstX2I	RGATCY	4 cut(s)	1187, 1342, 1549, 1714
BstYI	RGATCY	4 cut(s)	1187, 1342, 1549, 1714
BstZI	CGGCCG	1 cut(s)	831
Bsu36I	CCTNAGG	2 cut(s)	206, 777
BtgI	CCRYGG	1 cut(s)	502
BtrI	CACGTC	1 cut(s)	385
BtsCI	GGATG	6 cut(s)	261, 390, 806, 1168, 1539, 1702
BtsI	GCAGTG	1 cut(s)	1509
BtsIMutI	CAGTG	6 cut(s)	719, 924, 1072, 1362, 1509, 1904
Cac8I	GCNNGC	7 cut(s)	238, 399, 480, 636, 885, 1830, 1854
CaiI	CAGNNNCTG	1 cut(s)	1783
CfoI	GCGC	6 cut(s)	364, 478, 529, 538, 634, 1603
Cfr10I	RCCGGY	1 cut(s)	236
Cfr13I	GGNCC	9 cut(s)	295, 313, 715, 772, 837, 885, 905, 911, 1271
Cfr9I	CCCGGG	1 cut(s)	727
CseI	GACGC	1 cut(s)	424
Csp6I	GTAC	3 cut(s)	448, 649, 1800
CviAII	CATG	5 cut(s)	48, 811, 1038, 1454, 1568
CviQI	GTAC	3 cut(s)	448, 649, 1800
DdeI	CTNAG	6 cut(s)	206, 483, 777, 876, 1299, 1784
DpnI	GATC	7 cut(s)	608, 1189, 1344, 1551, 1656, 1716, 1842
DpnII	GATC	7 cut(s)	606, 1187, 1342, 1549, 1654, 1714, 1840
EaeI	YGGCCR	3 cut(s)	399, 636, 831
EagI	CGGCCG	1 cut(s)	831
Eam1104I	CTCTTC	7 cut(s)	38, 355, 571, 782, 990, 1113, 1164
EarI	CTCTTC	7 cut(s)	38, 355, 571, 782, 990, 1113, 1164
EciI	GGCGGA	3 cut(s)	146, 166, 753
EclXI	CGGCCG	1 cut(s)	831
Eco130I	CCWWGG	3 cut(s)	1133, 1267, 1935
Eco24I	GRGCYC	1 cut(s)	865
Eco47I	GGWCC	3 cut(s)	715, 772, 837
Eco47III	AGCGCT	1 cut(s)	1602
Eco52I	CGGCCG	1 cut(s)	831
Eco57I	CTGAAG	3 cut(s)	806, 1785, 1841
Eco81I	CCTNAGG	2 cut(s)	206, 777
Eco88I	CYCGRG	2 cut(s)	539, 727
Eco91I	GGTNACC	1 cut(s)	955
EcoNI	CCTNNNNNAGG	1 cut(s)	205
EcoO109I	RGGNCCY	2 cut(s)	715, 772
EcoO65I	GGTNACC	1 cut(s)	955
EcoRII	CCWGG	7 cut(s)	291, 675, 907, 936, 1273, 1608, 1869
EcoT14I	CCWWGG	3 cut(s)	1133, 1267, 1935
EcoT22I	ATGCAT	2 cut(s)	53, 1039
EcoT38I	GRGCYC	1 cut(s)	865
ErhI	CCWWGG	3 cut(s)	1133, 1267, 1935
FaeI	CATG	5 cut(s)	51, 814, 1041, 1457, 1571
FalI	AAGNNNNNCTT	2 cut(s)	476, 508
FaqI	GGGAC	4 cut(s)	262, 400, 728, 850
FatI	CATG	5 cut(s)	47, 810, 1037, 1453, 1567
FauI	CCCGC	6 cut(s)	402, 548, 851, 876, 879, 1821
FauNDI	CATATG	2 cut(s)	1045, 1648
FblI	GTMKAC	1 cut(s)	387
FokI	GGATG	6 cut(s)	248, 377, 793, 1175, 1546, 1709
FriOI	GRGCYC	1 cut(s)	865
FspBI	CTAG	2 cut(s)	1134, 1712
GlaI	GCGC	6 cut(s)	363, 477, 528, 537, 633, 1602
GsuI	CTGGAG	1 cut(s)	284
HaeII	RGCGCY	2 cut(s)	539, 1604
HapII	CCGG	8 cut(s)	237, 288, 407, 468, 728, 834, 888, 1458
HgaI	GACGC	1 cut(s)	424
HhaI	GCGC	6 cut(s)	364, 478, 529, 538, 634, 1603
Hin1I	GRCGYC	1 cut(s)	435
Hin1II	CATG	5 cut(s)	51, 814, 1041, 1457, 1571
Hin6I	GCGC	6 cut(s)	362, 476, 527, 536, 632, 1601
HinP1I	GCGC	6 cut(s)	362, 476, 527, 536, 632, 1601
HincII	GTYRAC	3 cut(s)	8, 388, 1057
HindII	GTYRAC	3 cut(s)	8, 388, 1057
HinfI	GANTC	8 cut(s)	891, 1129, 1278, 1294, 1427, 1520, 1619, 1874
HpaII	CCGG	8 cut(s)	237, 288, 407, 468, 728, 834, 888, 1458
HphI	GGTGA	8 cut(s)	19, 111, 208, 556, 577, 709, 967, 1336
Hpy166II	GTNNAC	6 cut(s)	8, 388, 499, 547, 651, 1057
Hpy188I	TCNGA	6 cut(s)	611, 786, 867, 966, 1432, 1879
Hpy188III	TCNNGA	4 cut(s)	301, 496, 1319, 1346
Hpy8I	GTNNAC	6 cut(s)	8, 388, 499, 547, 651, 1057
Hpy99I	CGWCG	5 cut(s)	197, 389, 425, 440, 1101
HpyAV	CCTTC	5 cut(s)	132, 474, 1327, 1476, 1883
HpyCH4IV	ACGT	2 cut(s)	384, 549
HpyCH4V	TGCA	8 cut(s)	51, 81, 1037, 1166, 1262, 1439, 1450, 1751
HpyF3I	CTNAG	6 cut(s)	206, 483, 777, 876, 1299, 1784
HpySE526I	ACGT	2 cut(s)	384, 549
Hsp92I	GRCGYC	1 cut(s)	435
Hsp92II	CATG	5 cut(s)	51, 814, 1041, 1457, 1571
HspAI	GCGC	6 cut(s)	362, 476, 527, 536, 632, 1601
KflI	GGGWCCC	1 cut(s)	715
KroI	GCCGGC	1 cut(s)	236
KroNI	GCCGGC	1 cut(s)	238
Kzo9I	GATC	7 cut(s)	606, 1187, 1342, 1549, 1654, 1714, 1840
LguI	GCTCTTC	2 cut(s)	990, 1113
LmnI	GCTCC	4 cut(s)	749, 868, 1232, 1608
Lsp1109I	GCAGC	3 cut(s)	390, 1274, 1763
LweI	GCATC	6 cut(s)	60, 1024, 1153, 1448, 1839, 1918
MaeI	CTAG	2 cut(s)	1134, 1712
MaeII	ACGT	2 cut(s)	384, 549
MaeIII	GTNAC	3 cut(s)	955, 1080, 1324
MalI	GATC	7 cut(s)	608, 1189, 1344, 1551, 1656, 1716, 1842
MboI	GATC	7 cut(s)	606, 1187, 1342, 1549, 1654, 1714, 1840
MfeI	CAATTG	1 cut(s)	1731
MflI	RGATCY	4 cut(s)	1187, 1342, 1549, 1714
MhlI	GDGCHC	2 cut(s)	214, 865
MluCI	AATT	6 cut(s)	133, 1143, 1623, 1636, 1731, 1739
MlyI	GAGTC	3 cut(s)	900, 1288, 1514
MmeI	TCCRAC	6 cut(s)	466, 741, 890, 972, 1106, 1674
Mph1103I	ATGCAT	2 cut(s)	53, 1039
MroNI	GCCGGC	1 cut(s)	236
MseI	TTAA	4 cut(s)	1218, 1248, 1661, 1945
MslI	CAYNNNNRTG	2 cut(s)	1032, 1566
MspA1I	CMGCKG	2 cut(s)	397, 1303
MspI	CCGG	8 cut(s)	237, 288, 407, 468, 728, 834, 888, 1458
MunI	CAATTG	1 cut(s)	1731
Mva1269I	GAATGC	1 cut(s)	81
MvaI	CCWGG	7 cut(s)	293, 677, 909, 938, 1275, 1610, 1871
MvnI	CGCG	2 cut(s)	362, 1079
NaeI	GCCGGC	1 cut(s)	238
NciI	CCSGG	5 cut(s)	408, 728, 729, 835, 1459
NdeI	CATATG	2 cut(s)	1045, 1648
NdeII	GATC	7 cut(s)	606, 1187, 1342, 1549, 1654, 1714, 1840
NgoMIV	GCCGGC	1 cut(s)	236
NlaIII	CATG	5 cut(s)	51, 814, 1041, 1457, 1571
NmeAIII	GCCGAG	5 cut(s)	427, 618, 643, 834, 850
NmuCI	GTSAC	2 cut(s)	955, 1324
NsiI	ATGCAT	2 cut(s)	53, 1039
NspI	RCATGY	1 cut(s)	1457
PciSI	GCTCTTC	2 cut(s)	990, 1113
PcsI	WCGNNNNNNNCGW	3 cut(s)	381, 510, 546
PctI	GAATGC	1 cut(s)	81
PdiI	GCCGGC	1 cut(s)	238
PfeI	GAWTC	5 cut(s)	1129, 1278, 1427, 1619, 1874
PflMI	CCANNNNNTGG	1 cut(s)	1693
PfoI	TCCNGGA	1 cut(s)	1869
PleI	GAGTC	3 cut(s)	899, 1288, 1514
PpsI	GAGTC	3 cut(s)	899, 1288, 1514
PpuMI	RGGWCCY	2 cut(s)	715, 772
Psp1406I	AACGTT	1 cut(s)	549
Psp5II	RGGWCCY	2 cut(s)	715, 772
Psp6I	CCWGG	7 cut(s)	291, 675, 907, 936, 1273, 1608, 1869
PspEI	GGTNACC	1 cut(s)	955
PspGI	CCWGG	7 cut(s)	291, 675, 907, 936, 1273, 1608, 1869
PspPI	GGNCC	9 cut(s)	295, 313, 715, 772, 837, 885, 905, 911, 1271
PspPPI	RGGWCCY	2 cut(s)	715, 772
PsrI	GAACNNNNNNTAC	2 cut(s)	917, 949
PstNI	CAGNNNCTG	1 cut(s)	1783
PsuI	RGATCY	4 cut(s)	1187, 1342, 1549, 1714
PvuII	CAGCTG	1 cut(s)	1303
RsaI	GTAC	3 cut(s)	449, 650, 1801
RsaNI	GTAC	3 cut(s)	448, 649, 1800
RseI	CAYNNNNRTG	2 cut(s)	1032, 1566
SalI	GTCGAC	1 cut(s)	386
SapI	GCTCTTC	2 cut(s)	990, 1113
SaqAI	TTAA	4 cut(s)	1218, 1248, 1661, 1945
Sau3AI	GATC	7 cut(s)	606, 1187, 1342, 1549, 1654, 1714, 1840
Sau96I	GGNCC	9 cut(s)	295, 313, 715, 772, 837, 885, 905, 911, 1271
SchI	GAGTC	3 cut(s)	900, 1288, 1514
SduI	GDGCHC	2 cut(s)	214, 865
SfaNI	GCATC	6 cut(s)	60, 1024, 1153, 1448, 1839, 1918
SinI	GGWCC	3 cut(s)	715, 772, 837
SmaI	CCCGGG	1 cut(s)	729
SmiMI	CAYNNNNRTG	2 cut(s)	1032, 1566
SmlI	CTYRAG	2 cut(s)	530, 1319
SmoI	CTYRAG	2 cut(s)	530, 1319
Sse9I	AATT	6 cut(s)	133, 1143, 1623, 1636, 1731, 1739
SspI	AATATT	1 cut(s)	802
SspMI	CTAG	2 cut(s)	1134, 1712
StyI	CCWWGG	3 cut(s)	1133, 1267, 1935
TaiI	ACGT	2 cut(s)	387, 552
TaqI	TCGA	3 cut(s)	255, 387, 1099
TasI	AATT	6 cut(s)	133, 1143, 1623, 1636, 1731, 1739
TatI	WGTACW	2 cut(s)	648, 1799
TauI	GCSGC	8 cut(s)	200, 429, 432, 435, 513, 585, 833, 1079
TfiI	GAWTC	5 cut(s)	1129, 1278, 1427, 1619, 1874
Tru1I	TTAA	4 cut(s)	1218, 1248, 1661, 1945
Tru9I	TTAA	4 cut(s)	1218, 1248, 1661, 1945
TscAI	CASTG	6 cut(s)	726, 924, 1072, 1369, 1516, 1904
TseFI	GTSAC	2 cut(s)	955, 1324
TseI	GCWGC	3 cut(s)	378, 1262, 1751
Tsp45I	GTSAC	2 cut(s)	955, 1324
TspDTI	ATGAA	7 cut(s)	25, 61, 716, 1106, 1550, 1635, 1785
TspMI	CCCGGG	1 cut(s)	727
TspRI	CASTG	6 cut(s)	726, 924, 1072, 1369, 1516, 1904
Van91I	CCANNNNNTGG	1 cut(s)	1693
VpaK11BI	GGWCC	3 cut(s)	715, 772, 837
XagI	CCTNNNNNAGG	1 cut(s)	205
XapI	RAATTY	2 cut(s)	133, 1739
XceI	RCATGY	1 cut(s)	1457
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1694
XmaI	CCCGGG	1 cut(s)	727
XmaJI	CCTAGG	1 cut(s)	1133
XmiI	GTMKAC	1 cut(s)	387
XspI	CTAG	2 cut(s)	1134, 1712
Zsp2I	ATGCAT	2 cut(s)	53, 1039

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.