FvH4_6g22820

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
16499642 .. 16502300
2659 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g22820.t1

Sequence Viewer

Length: 1545 bp
ATGGAAACAGATTTCCAAGGCTACATCATACTCTTCCTTGTTTGGCTAGTCTCCACAATCCTTGTCCGAACCATATTGGCCAAATTTCGGACCAATTCTCGCCTTCCACCAAGTCCAATGGCATTACCAATCATTGGACACCTTCACCTCCTTGCCCCAATACCTCACCAAGCTCTTCACAAGCTATCAAACCGCCTTGGACCTTTAGTGCACATCTTTCTGGGTTCTGTCCCTTGTGTAGTTGTTTCATCCCCCGAAATGGCGAAAGAGTTTCTCAAGACTCATGAAGCTTCCTTCTCCAACAGACCACATATGGCTGCTGTTGATTATCTTACATACGGGTCAGCTGATTTTTCGTTTGCGCCTTATGGACCCTACTGGAAATTCATGAAGAAACTTTGCATGTCTGAACTTCTCGGTGGAAGAACACTTGATCAGCTCCTTCCAGTGAGGCGTGAAGAGATGACGAGCTTCATAGACTTGATGCTAAACAAGGCCAAGGCAAATGAAGCAGTTGATGTTGGAGCTGAGCTTATGAATGTAACCAACAATATCATATCAAGAATGCTTATGGGGCAGGGTTGTTCTGCGAGCGAAAAAGAGGCTGATGAGGTCAGAAAGTTGGTCAAAGCTGTTGCTGAGCTAACAGGGAAGTTCAATTTGTCAGACTTCATTTGGTTTTGTAAGAACTTGGATTTGCAGGGATTTGGGAAAAATCTTAAGAAAGTGCGTGATCAGTTTGACACTATGATGGAGAGGATCATAAAGGAGCATCAAGAGGCACTAAAGAAGAAGAAAGTGGCAGAAAGTGATGGTTATGTTAAAGATTTGCTCGACATTTTACTTGATATATCTGAAGATGAGACCTCAGAGATCAGACTCACTAGAGAAAACATAAAGGCCTTCATCCTGGACATATTTGCTGCTGGTACCGACACATCTGCGATTACAACAGAATGGGCACTAGCGGAGCTAATCAACCACCCAGATATCATGAACAAAGCAAGACAAGAAATCAACACCATAATTGGGAACAACAGGCTAGTACAAGAATCAGACATTGCAAACCTTCCATACCTGCAAGCCATAGTGAAAGAGACACTAAGGCTTCATCCAACAGGTCCATTAATTGTGAGAGAGTCAACTGAACCCTGTTCAATTGGCGGCTATGATATTCCAGCAAGAACCAGGTTGTTTGTTAACGTGTGGGCTGTCAACAGAGACCCCAATCACTGGGAGAAGCCTCTGGAGTTTGAGCCAGAAAGGTTTACACACAATGAAGGTAACGGGAAGAGCCAACTAGACGTGAGAGGACAACATTTTCATTTGTTGCCATTTGGTAGTGGAAGAAGAGGGTGTCCTGGAACCTCACTTGCACTGCAGGTTGTGCAGACAACACTTGCAGCTATGATTCAGTGCTTTGAATGGAAGGTACCTAGTGGTAGTGTTGACATGGAAGAGGGCCTTGGATTAACACTTCCAAGAGCTCATCCATTGGTTTGTGTTCCAGTTGCTAGGCTCAGTCCCTTTCCATCTATTGATTAA

Protein Analysis

515

Amino Acids

57.67

Weight (kDa)

6.33

Isoelectric Point (pI)

33.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 36 - 500 8.5e-109 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1086, 1372
Acc65I GGTACC 2 cut(s) 929, 1432
AccB1I GGYRCC 2 cut(s) 929, 1432
AccB7I CCANNNNNTGG 2 cut(s) 134, 1233
AciI CCGC 3 cut(s) 193, 968, 1164
AclWI GGATC 1 cut(s) 767
AcoI YGGCCR 1 cut(s) 78
AcsI RAATTY 2 cut(s) 83, 383
AcuI CTGAAG 1 cut(s) 876
AfaI GTAC 3 cut(s) 931, 1047, 1434
AfiI CCNNNNNNNGG 5 cut(s) 87, 134, 259, 1029, 1233
AflII CTTAAG 1 cut(s) 719
AflIII ACRYGT 1 cut(s) 1203
AgsI TTSAA 3 cut(s) 658, 1158, 1424
AjiI CACGTC 1 cut(s) 1306
AjnI CCWGG 3 cut(s) 909, 1187, 1360
AjuI GAANNNNNNNTTGG 2 cut(s) 1449, 1481
Alw21I GWGCWC 2 cut(s) 213, 1489
Alw26I GTCTC 4 cut(s) 55, 857, 1091, 1215
Alw44I GTGCAC 1 cut(s) 209
AlwI GGATC 1 cut(s) 767
AoxI GGCC 4 cut(s) 78, 495, 900, 1462
ApaLI GTGCAC 1 cut(s) 209
ApeKI GCWGC 3 cut(s) 317, 923, 1403
ApoI RAATTY 2 cut(s) 83, 383
AseI ATTAAT 1 cut(s) 1127
Asp718I GGTACC 2 cut(s) 929, 1432
AspLEI GCGC 1 cut(s) 364
AspS9I GGNCC 5 cut(s) 90, 200, 371, 1121, 1462
AsuHPI GGTGA 2 cut(s) 137, 158
AvaII GGWCC 4 cut(s) 90, 200, 371, 1121
BaeGI GKGCMC 2 cut(s) 213, 964
BalI TGGCCA 1 cut(s) 80
BanI GGYRCC 2 cut(s) 929, 1432
BanII GRGCYC 1 cut(s) 1489
Bbv12I GWGCWC 2 cut(s) 213, 1489
BbvI GCAGC 3 cut(s) 304, 910, 1415
BccI CCATC 3 cut(s) 745, 806, 1540
BcgI CGANNNNNNTGC 2 cut(s) 923, 957
BciT130I CCWGG 3 cut(s) 911, 1189, 1362
BclI TGATCA 2 cut(s) 433, 733
BcoDI GTCTC 4 cut(s) 55, 857, 1091, 1215
BfaI CTAG 7 cut(s) 47, 885, 965, 1043, 1301, 1437, 1515
BfmI CTRYAG 1 cut(s) 1379
BfrI CTTAAG 1 cut(s) 719
BfuAI ACCTGC 2 cut(s) 1086, 1372
BisI GCNGC 4 cut(s) 318, 924, 1165, 1404
BlpI GCTNAGC 2 cut(s) 528, 639
BlsI GCNGC 4 cut(s) 319, 925, 1166, 1405
Bme1390I CCNGG 3 cut(s) 911, 1189, 1362
Bme18I GGWCC 4 cut(s) 90, 200, 371, 1121
BmgBI CACGTC 1 cut(s) 1306
BmgT120I GGNCC 5 cut(s) 90, 200, 371, 1121, 1462
BmiI GGNNCC 4 cut(s) 373, 931, 1366, 1434
BmrFI CCNGG 3 cut(s) 911, 1189, 1362
BmrI ACTGGG 1 cut(s) 1243
BmsI GCATC 2 cut(s) 474, 781
BmuI ACTGGG 1 cut(s) 1243
BpmI CTGGAG 1 cut(s) 1268
Bpu1102I GCTNAGC 2 cut(s) 528, 639
BpuEI CTTGAG 1 cut(s) 260
BsaI GGTCTC 2 cut(s) 857, 1215
BsaJI CCNNGG 4 cut(s) 16, 196, 498, 1465
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 134, 259, 1029, 1233
Bse1I ACTGG 4 cut(s) 383, 446, 1238, 1508
Bse3DI GCAATG 1 cut(s) 1059
BseBI CCWGG 3 cut(s) 911, 1189, 1362
BseDI CCNNGG 4 cut(s) 16, 196, 498, 1465
BseGI GGATG 4 cut(s) 248, 906, 1111, 1489
BseLI CCNNNNNNNGG 5 cut(s) 87, 134, 259, 1029, 1233
BseMI GCAATG 1 cut(s) 1059
BseMII CTCAG 4 cut(s) 519, 630, 882, 1534
BseNI ACTGG 4 cut(s) 383, 446, 1238, 1508
BseSI GKGCMC 2 cut(s) 213, 964
BseXI GCAGC 3 cut(s) 304, 910, 1415
BsgI GTGCAG 1 cut(s) 1409
BshFI GGCC 4 cut(s) 80, 497, 902, 1464
BshNI GGYRCC 2 cut(s) 929, 1432
BsiHKAI GWGCWC 2 cut(s) 213, 1489
BslFI GGGAC 2 cut(s) 215, 1509
BslI CCNNNNNNNGG 5 cut(s) 87, 134, 259, 1029, 1233
BsmAI GTCTC 4 cut(s) 55, 857, 1091, 1215
BsmFI GGGAC 2 cut(s) 215, 1509
BsmI GAATGC 1 cut(s) 570
BsnI GGCC 4 cut(s) 80, 497, 902, 1464
Bso31I GGTCTC 2 cut(s) 857, 1215
Bsp1286I GDGCHC 3 cut(s) 213, 964, 1489
Bsp143I GATC 4 cut(s) 433, 733, 759, 873
Bsp1720I GCTNAGC 2 cut(s) 528, 639
BspACI CCGC 3 cut(s) 193, 968, 1164
BspANI GGCC 4 cut(s) 80, 497, 902, 1464
BspCNI CTCAG 4 cut(s) 520, 631, 881, 1533
BspHI TCATGA 3 cut(s) 283, 387, 993
BspLI GGNNCC 4 cut(s) 373, 931, 1366, 1434
BspMAI CTGCAG 1 cut(s) 1383
BspMI ACCTGC 2 cut(s) 1086, 1372
BspPI GGATC 1 cut(s) 767
BspQI GCTCTTC 2 cut(s) 180, 1286
BspT107I GGYRCC 2 cut(s) 929, 1432
BspTI CTTAAG 1 cut(s) 719
BspTNI GGTCTC 2 cut(s) 857, 1215
BsrDI GCAATG 1 cut(s) 1059
BsrI ACTGG 4 cut(s) 383, 446, 1238, 1508
BssECI CCNNGG 4 cut(s) 16, 196, 498, 1465
BssMI GATC 4 cut(s) 433, 733, 759, 873
BssT1I CCWWGG 4 cut(s) 16, 196, 498, 1465
Bst2UI CCWGG 3 cut(s) 911, 1189, 1362
Bst6I CTCTTC 6 cut(s) 38, 180, 453, 1286, 1345, 1452
BstAFI CTTAAG 1 cut(s) 719
BstAPI GCANNNNNTGC 1 cut(s) 1387
BstC8I GCNNGC 2 cut(s) 592, 1083
BstDEI CTNAG 5 cut(s) 528, 639, 868, 1103, 1520
BstF5I GGATG 4 cut(s) 248, 906, 1111, 1489
BstHHI GCGC 1 cut(s) 364
BstKTI GATC 4 cut(s) 436, 736, 762, 876
BstMAI GTCTC 4 cut(s) 55, 857, 1091, 1215
BstMBI GATC 4 cut(s) 433, 733, 759, 873
BstMWI GCNNNNNNNGC 3 cut(s) 509, 574, 1387
BstNI CCWGG 3 cut(s) 911, 1189, 1362
BstNSI RCATGY 1 cut(s) 406
BstSCI CCNGG 3 cut(s) 909, 1187, 1360
BstSFI CTRYAG 1 cut(s) 1379
BstSLI GKGCMC 2 cut(s) 213, 964
BstV1I GCAGC 3 cut(s) 304, 910, 1415
BsuRI GGCC 4 cut(s) 80, 497, 902, 1464
BtrI CACGTC 1 cut(s) 1306
BtsCI GGATG 4 cut(s) 248, 906, 1111, 1489
BtsI GCAGTG 1 cut(s) 1376
BtsIMutI CAGTG 4 cut(s) 453, 1231, 1376, 1421
BveI ACCTGC 2 cut(s) 1086, 1372
Cac8I GCNNGC 2 cut(s) 592, 1083
CciI TCATGA 3 cut(s) 283, 387, 993
CfoI GCGC 1 cut(s) 364
Cfr13I GGNCC 5 cut(s) 90, 200, 371, 1121, 1462
CsiI ACCWGGT 1 cut(s) 1187
Csp6I GTAC 3 cut(s) 930, 1046, 1433
CspCI CAANNNNNGTGG 2 cut(s) 43, 78
CviAII CATG 5 cut(s) 284, 388, 403, 994, 1453
CviQI GTAC 3 cut(s) 930, 1046, 1433
DdeI CTNAG 5 cut(s) 528, 639, 868, 1103, 1520
DpnI GATC 4 cut(s) 435, 735, 761, 875
DpnII GATC 4 cut(s) 433, 733, 759, 873
EaeI YGGCCR 1 cut(s) 78
Eam1104I CTCTTC 6 cut(s) 38, 180, 453, 1286, 1345, 1452
EarI CTCTTC 6 cut(s) 38, 180, 453, 1286, 1345, 1452
Ecl136II GAGCTC 1 cut(s) 1487
Eco130I CCWWGG 4 cut(s) 16, 196, 498, 1465
Eco147I AGGCCT 1 cut(s) 902
Eco24I GRGCYC 1 cut(s) 1489
Eco31I GGTCTC 2 cut(s) 857, 1215
Eco32I GATATC 1 cut(s) 991
Eco47I GGWCC 4 cut(s) 90, 200, 371, 1121
Eco53kI GAGCTC 1 cut(s) 1487
Eco57I CTGAAG 1 cut(s) 876
EcoICRI GAGCTC 1 cut(s) 1487
EcoO109I RGGNCCY 1 cut(s) 1462
EcoRII CCWGG 3 cut(s) 909, 1187, 1360
EcoRV GATATC 1 cut(s) 991
EcoT14I CCWWGG 4 cut(s) 16, 196, 498, 1465
EcoT38I GRGCYC 1 cut(s) 1489
ErhI CCWWGG 4 cut(s) 16, 196, 498, 1465
FaeI CATG 5 cut(s) 287, 391, 406, 997, 1456
FalI AAGNNNNNCTT 2 cut(s) 1449, 1481
FaqI GGGAC 2 cut(s) 215, 1509
FatI CATG 5 cut(s) 283, 387, 402, 993, 1452
FauNDI CATATG 1 cut(s) 312
FbaI TGATCA 2 cut(s) 433, 733
Fnu4HI GCNGC 4 cut(s) 318, 924, 1165, 1404
FokI GGATG 4 cut(s) 235, 893, 1098, 1476
FriOI GRGCYC 1 cut(s) 1489
Fsp4HI GCNGC 4 cut(s) 318, 924, 1165, 1404
FspBI CTAG 7 cut(s) 47, 885, 965, 1043, 1301, 1437, 1515
GlaI GCGC 1 cut(s) 363
GluI GCNGC 4 cut(s) 318, 924, 1165, 1404
GsuI CTGGAG 1 cut(s) 1268
HaeIII GGCC 4 cut(s) 80, 497, 902, 1464
HhaI GCGC 1 cut(s) 364
Hin1II CATG 5 cut(s) 287, 391, 406, 997, 1456
Hin6I GCGC 1 cut(s) 362
HinP1I GCGC 1 cut(s) 362
HincII GTYRAC 4 cut(s) 1143, 1201, 1216, 1450
HindII GTYRAC 4 cut(s) 1143, 1201, 1216, 1450
HindIII AAGCTT 1 cut(s) 288
HinfI GANTC 5 cut(s) 280, 879, 1052, 1139, 1411
HpaI GTTAAC 1 cut(s) 1201
HphI GGTGA 2 cut(s) 137, 158
Hpy166II GTNNAC 6 cut(s) 211, 1143, 1201, 1216, 1269, 1450
Hpy188I TCNGA 9 cut(s) 68, 90, 409, 617, 667, 856, 871, 878, 1057
Hpy188III TCNNGA 7 cut(s) 277, 284, 388, 561, 776, 994, 1247
Hpy8I GTNNAC 6 cut(s) 211, 1143, 1201, 1216, 1269, 1450
HpyAV CCTTC 8 cut(s) 113, 152, 304, 452, 913, 1079, 1274, 1423
HpyCH4IV ACGT 2 cut(s) 1203, 1305
HpyCH4V TGCA 9 cut(s) 211, 402, 700, 1064, 1081, 1376, 1381, 1390, 1403
HpyF10VI GCNNNNNNNGC 3 cut(s) 509, 574, 1387
HpyF3I CTNAG 5 cut(s) 528, 639, 868, 1103, 1520
HpySE526I ACGT 2 cut(s) 1203, 1305
Hsp92II CATG 5 cut(s) 287, 391, 406, 997, 1456
HspAI GCGC 1 cut(s) 362
KpnI GGTACC 2 cut(s) 933, 1436
Ksp22I TGATCA 2 cut(s) 433, 733
KspAI GTTAAC 1 cut(s) 1201
Kzo9I GATC 4 cut(s) 433, 733, 759, 873
LguI GCTCTTC 2 cut(s) 180, 1286
LmnI GCTCC 4 cut(s) 444, 524, 769, 970
Lsp1109I GCAGC 3 cut(s) 304, 910, 1415
LweI GCATC 2 cut(s) 474, 781
MabI ACCWGGT 1 cut(s) 1187
MaeI CTAG 7 cut(s) 47, 885, 965, 1043, 1301, 1437, 1515
MaeII ACGT 2 cut(s) 1203, 1305
MaeIII GTNAC 2 cut(s) 541, 1283
MalI GATC 4 cut(s) 435, 735, 761, 875
MboI GATC 4 cut(s) 433, 733, 759, 873
MfeI CAATTG 1 cut(s) 1158
MhlI GDGCHC 3 cut(s) 213, 964, 1489
MlsI TGGCCA 1 cut(s) 80
MluCI AATT 7 cut(s) 83, 94, 383, 658, 1026, 1128, 1158
MluNI TGGCCA 1 cut(s) 80
MlyI GAGTC 3 cut(s) 274, 873, 1148
MmeI TCCRAC 3 cut(s) 324, 502, 1139
Mox20I TGGCCA 1 cut(s) 80
MscI TGGCCA 1 cut(s) 80
MseI TTAA 6 cut(s) 720, 822, 1127, 1200, 1472, 1543
MslI CAYNNNNRTG 1 cut(s) 749
Msp20I TGGCCA 1 cut(s) 80
MspA1I CMGCKG 1 cut(s) 347
MspCI CTTAAG 1 cut(s) 719
MspR9I CCNGG 3 cut(s) 911, 1189, 1362
MunI CAATTG 1 cut(s) 1158
Mva1269I GAATGC 1 cut(s) 570
MvaI CCWGG 3 cut(s) 911, 1189, 1362
MwoI GCNNNNNNNGC 3 cut(s) 509, 574, 1387
NdeI CATATG 1 cut(s) 312
NdeII GATC 4 cut(s) 433, 733, 759, 873
NlaIII CATG 5 cut(s) 287, 391, 406, 997, 1456
NlaIV GGNNCC 4 cut(s) 373, 931, 1366, 1434
NspI RCATGY 1 cut(s) 406
PagI TCATGA 3 cut(s) 283, 387, 993
PceI AGGCCT 1 cut(s) 902
PciSI GCTCTTC 2 cut(s) 180, 1286
PctI GAATGC 1 cut(s) 570
PfeI GAWTC 2 cut(s) 1052, 1411
PflMI CCANNNNNTGG 2 cut(s) 134, 1233
PfoI TCCNGGA 2 cut(s) 909, 1360
PkrI GCNGC 4 cut(s) 319, 925, 1166, 1405
PleI GAGTC 3 cut(s) 274, 873, 1147
PpsI GAGTC 3 cut(s) 274, 873, 1147
PshBI ATTAAT 1 cut(s) 1127
Psp124BI GAGCTC 1 cut(s) 1489
Psp6I CCWGG 3 cut(s) 909, 1187, 1360
PspGI CCWGG 3 cut(s) 909, 1187, 1360
PspN4I GGNNCC 4 cut(s) 373, 931, 1366, 1434
PspPI GGNCC 5 cut(s) 90, 200, 371, 1121, 1462
PstI CTGCAG 1 cut(s) 1383
PvuII CAGCTG 1 cut(s) 347
RsaI GTAC 3 cut(s) 931, 1047, 1434
RsaNI GTAC 3 cut(s) 930, 1046, 1433
RseI CAYNNNNRTG 1 cut(s) 749
SacI GAGCTC 1 cut(s) 1489
SapI GCTCTTC 2 cut(s) 180, 1286
SaqAI TTAA 6 cut(s) 720, 822, 1127, 1200, 1472, 1543
SatI GCNGC 4 cut(s) 318, 924, 1165, 1404
Sau3AI GATC 4 cut(s) 433, 733, 759, 873
Sau96I GGNCC 5 cut(s) 90, 200, 371, 1121, 1462
SchI GAGTC 3 cut(s) 274, 873, 1148
ScrFI CCNGG 3 cut(s) 911, 1189, 1362
SduI GDGCHC 3 cut(s) 213, 964, 1489
SexAI ACCWGGT 1 cut(s) 1187
SfaNI GCATC 2 cut(s) 474, 781
SfcI CTRYAG 1 cut(s) 1379
SinI GGWCC 4 cut(s) 90, 200, 371, 1121
SmiMI CAYNNNNRTG 1 cut(s) 749
SmlI CTYRAG 2 cut(s) 275, 719
SmoI CTYRAG 2 cut(s) 275, 719
Sse9I AATT 7 cut(s) 83, 94, 383, 658, 1026, 1128, 1158
SseBI AGGCCT 1 cut(s) 902
SsiI CCGC 3 cut(s) 193, 968, 1164
SspMI CTAG 7 cut(s) 47, 885, 965, 1043, 1301, 1437, 1515
SstI GAGCTC 1 cut(s) 1489
StuI AGGCCT 1 cut(s) 902
StyD4I CCNGG 3 cut(s) 909, 1187, 1360
StyI CCWWGG 4 cut(s) 16, 196, 498, 1465
TaiI ACGT 2 cut(s) 1206, 1308
TaqI TCGA 1 cut(s) 834
TasI AATT 7 cut(s) 83, 94, 383, 658, 1026, 1128, 1158
TatI WGTACW 1 cut(s) 1045
TauI GCSGC 1 cut(s) 1167
TfiI GAWTC 2 cut(s) 1052, 1411
Tru1I TTAA 6 cut(s) 720, 822, 1127, 1200, 1472, 1543
Tru9I TTAA 6 cut(s) 720, 822, 1127, 1200, 1472, 1543
TscAI CASTG 4 cut(s) 453, 1238, 1383, 1421
TseI GCWGC 3 cut(s) 317, 923, 1403
TspRI CASTG 4 cut(s) 453, 1238, 1383, 1421
Van91I CCANNNNNTGG 2 cut(s) 134, 1233
Vha464I CTTAAG 1 cut(s) 719
VneI GTGCAC 1 cut(s) 209
VpaK11BI GGWCC 4 cut(s) 90, 200, 371, 1121
VspI ATTAAT 1 cut(s) 1127
XapI RAATTY 2 cut(s) 83, 383
XceI RCATGY 1 cut(s) 406
XspI CTAG 7 cut(s) 47, 885, 965, 1043, 1301, 1437, 1515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.