Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0004503

Physical Location & Seq

Genomic Coordinates Forward (+)

10971482 .. 10973460

Gene Structure 1979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G072300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGGAAGCAGAATTTCAAAGCTACATTATACTTTTCCTTGTCTCCATAGTTCTGGTTCGAACCATACTCACCAAAATTCAGAACAAACCTCGGCCTCCACCAAGTCCAATGGCCTTACCAGTCATTGGACACCTCCACCTCCTTGCTTTAATTCCTCACCAAGCTTTTCACAAGCTGTCTAGCCGCTATGGTTCTTTGATTCACATCTTTCTTGGTTCTGTTCCTTGTTTAGTCGCTTCCTCACCGGACATGGCAAAAGAGTTCCTCAAGACTCATGAAGGTTCCTTCTCCAGCAGGCCCTCTATGGCTGTTGTTGATTACCTCGCATATGGATCGTCTGATTTTGTATTTGCTCCTTATGGACCTTACTGGAAATTCATGAAGAAACTATGTGTTTCTGAGCTTCTTGGTGGAAGAACACTGGATCAGCTCCTTCCCGTCCGGCATGAAGAGTTGACAAGTTTCGTACAATTGATCCGAAAGAAGGCCAAGGCAGCTGAGGCTTTTGATGTTGGAGCGGCACTTATTACGATAACAAATAATATCATAACAAGAATGACTATGGGGCAGAGTTGGTCTAAAAATGAAAGAGATGCTGATGTGGTCAGGAAGGTGGTGAAAAACTTGGATTTGCAGGGCTTTGGGAAAAGGGTTAAGGAACTACGCGATACGTTTGATACTATGATGGAGAGGGTTATAGAGGAGCACCAAGAGACAAGGAAGAAAAGGAAGGAACTTGGTGAAGGTTGTGATGCAGTTAAGGATTTGCTTGACATTTTACTCGACATATCCGAAGACGAGACCTCAGAGTTTAGATTGAGTAGAATAAACATAAAGGCCTTCATCATGAATATATTTGCTGCTGGGACGGATACATCCGCGATTACGACAGAATGGGCACTAGCAGAGCTAATCAACCACCCAGAAGTGATGAAGAAAGCAATACAAGAAATTGACTCCATAGTTGGAAAGAACAGACTAGTACAAGAATCAGACATTGCCAACCTTCCTTACCTACAAGCCATAGTGAAGGAGACCCCCGCAGCCCCATTAATTGTGAGAGAGTCAACAGAAGCCTGCAGCATTGGTGGCTATGAGATTCCAGCAAAAACCAGATTGTTTGTCAATGTGTGGGCTATCAACAGAGACCCCAACCACTGGGAGAAGCCATTGGAGTTCGAGCCGGAGAGGTTTGTGACTGAAGACGGAAGTGGGAAGAGCCAGTTGGATGTGAGGGGGCAGCATTTTCATCTGTTGCCATTTGGTAGTGGAAGAAGAGGGTGCCCTGGAACTTCACTTGCATTGCAGGTTGTGCAGACAACACTTGCAGCTATTATCCAGTGCTTTGAGTGGAAAGTTGAAGGAGGGAGCAATAATGTTGATGTGGGAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00830 ko00943 ko00980 ko01100 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00943 map00980 map01100 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

465

Amino Acids

51.92

Weight (kDa)

6.48

Isoelectric Point (pI)

39.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004503)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06900
fragaria_vesca	FvH4_6g22820 FvH4_6g22840
malus_domestica	MD14G1063000.v1.1
prunus_persica	Prupe.7G071900_v2.0.a1 Prupe.7G072200_v2.0.a1 Prupe.7G072300_v2.0.a1 Prupe.7G072400_v2.0.a1
pyrus_communis	pycom14g05060
rosa_chinensis	RchiOBHm_Chr3g0480431 RchiOBHm_Chr3g0480461
rosa_laevigata	RLG00000023470 RLG00000023477 RLG00000023481 RLG00000023482
rosa_multiflora	Rmu_sc0002205.1_g000025 Rmu_sc0002205.1_g000030 Rmu_sc0002205.1_g000033
rosa_roxburghii	Rroxscaffold_6G00401330 Rroxscaffold_6G00401350
rosa_rugosa	Rorug03G0184000 Rorug03G0184100 Rorug03G0184200
rosa_samantha	Rh3AG235400 Rh3AG235500 Rh3BG268300 Rh3BG268700 Rh3CG265400 Rh3DG261300 Rh3DG261400
rosa_wichuraiana	Rw3G021130 Rw3G021140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1297
AccB1I	GGYRCC	1 cut(s)	1281
AccB7I	CCANNNNNTGG	2 cut(s)	125, 1158
AccBSI	CCGCTC	1 cut(s)	518
AccII	CGCG	2 cut(s)	666, 881
AciI	CCGC	4 cut(s)	184, 518, 879, 1041
AclWI	GGATC	3 cut(s)	340, 432, 469
AcsI	RAATTY	3 cut(s)	11, 75, 374
AcuI	CTGAAG	1 cut(s)	1221
AfaI	GTAC	2 cut(s)	468, 984
AfiI	CCNNNNNNNGG	3 cut(s)	125, 484, 1158
AgsI	TTSAA	2 cut(s)	17, 1361
AhlI	ACTAGT	1 cut(s)	979
AjnI	CCWGG	1 cut(s)	1285
AjuI	GAANNNNNNNTTGG	2 cut(s)	1208, 1240
AluBI	AGCT	8 cut(s)	21, 164, 175, 403, 430, 497, 910, 1331
AluI	AGCT	8 cut(s)	21, 164, 175, 403, 430, 497, 910, 1331
Alw21I	GWGCWC	1 cut(s)	708
Alw26I	GTCTC	5 cut(s)	46, 707, 794, 1028, 1140
AlwI	GGATC	3 cut(s)	340, 432, 469
AoxI	GGCC	5 cut(s)	92, 111, 296, 486, 837
ApeKI	GCWGC	6 cut(s)	494, 860, 1043, 1080, 1240, 1328
ApoI	RAATTY	3 cut(s)	11, 75, 374
AseI	ATTAAT	1 cut(s)	1052
AspS9I	GGNCC	2 cut(s)	297, 362
AsuHPI	GGTGA	5 cut(s)	61, 149, 234, 628, 752
AsuII	TTCGAA	1 cut(s)	58
AvaII	GGWCC	1 cut(s)	362
BaeGI	GKGCMC	2 cut(s)	901, 1286
BanI	GGYRCC	1 cut(s)	1281
BbsI	GAAGAC	2 cut(s)	801, 1209
Bbv12I	GWGCWC	1 cut(s)	708
BbvCI	CCTCAGC	1 cut(s)	498
BbvI	GCAGC	6 cut(s)	506, 847, 1055, 1092, 1252, 1340
BccI	CCATC	1 cut(s)	679
BcgI	CGANNNNNNTGC	2 cut(s)	315, 349
BciT130I	CCWGG	1 cut(s)	1287
BciVI	GTATCC	1 cut(s)	865
BcoDI	GTCTC	5 cut(s)	46, 707, 794, 1028, 1140
BcuI	ACTAGT	1 cut(s)	979
BfaI	CTAG	3 cut(s)	180, 902, 980
BfmI	CTRYAG	1 cut(s)	1078
BfuAI	ACCTGC	1 cut(s)	1297
BfuI	GTATCC	1 cut(s)	865
BisI	GCNGC	8 cut(s)	184, 495, 519, 861, 1044, 1081, 1241, 1329
BlsI	GCNGC	8 cut(s)	185, 496, 520, 862, 1045, 1082, 1242, 1330
Bme1390I	CCNGG	1 cut(s)	1287
Bme18I	GGWCC	1 cut(s)	362
BmgT120I	GGNCC	2 cut(s)	297, 362
BmiI	GGNNCC	3 cut(s)	283, 1283, 1390
BmrFI	CCNGG	1 cut(s)	1287
BmrI	ACTGGG	1 cut(s)	1168
BmsI	GCATC	2 cut(s)	583, 742
BmuI	ACTGGG	1 cut(s)	1168
BpiI	GAAGAC	2 cut(s)	801, 1209
BpmI	CTGGAG	1 cut(s)	274
Bpu10I	CCTNAGC	1 cut(s)	498
Bpu14I	TTCGAA	1 cut(s)	58
BpuEI	CTTGAG	1 cut(s)	251
BsaBI	GATNNNNATC	1 cut(s)	203
BsaI	GGTCTC	3 cut(s)	794, 1028, 1140
BsaJI	CCNNGG	3 cut(s)	89, 489, 1285
BsaWI	WCCGGW	1 cut(s)	244
Bsc4I	CCNNNNNNNGG	3 cut(s)	125, 484, 1158
Bse1I	ACTGG	6 cut(s)	119, 374, 426, 1163, 1222, 1339
Bse3DI	GCAATG	2 cut(s)	996, 1301
Bse8I	GATNNNNATC	1 cut(s)	203
BseBI	CCWGG	1 cut(s)	1287
BseDI	CCNNGG	3 cut(s)	89, 489, 1285
BseGI	GGATG	2 cut(s)	875, 1234
BseJI	GATNNNNATC	1 cut(s)	203
BseLI	CCNNNNNNNGG	3 cut(s)	125, 484, 1158
BseMI	GCAATG	2 cut(s)	996, 1301
BseMII	CTCAG	3 cut(s)	390, 489, 819
BseNI	ACTGG	6 cut(s)	119, 374, 426, 1163, 1222, 1339
BseRI	GAGGAG	1 cut(s)	716
BseSI	GKGCMC	2 cut(s)	901, 1286
BseXI	GCAGC	6 cut(s)	506, 847, 1055, 1092, 1252, 1340
BseYI	CCCAGC	1 cut(s)	863
BsgI	GTGCAG	1 cut(s)	1334
Bsh1236I	CGCG	2 cut(s)	666, 881
BshFI	GGCC	5 cut(s)	94, 113, 298, 488, 839
BshNI	GGYRCC	1 cut(s)	1281
BsiHKAI	GWGCWC	1 cut(s)	708
BsiSI	CCGG	3 cut(s)	245, 442, 1184
BslFI	GGGAC	1 cut(s)	880
BslI	CCNNNNNNNGG	3 cut(s)	125, 484, 1158
BsmAI	GTCTC	5 cut(s)	46, 707, 794, 1028, 1140
BsmFI	GGGAC	1 cut(s)	880
BsnI	GGCC	5 cut(s)	94, 113, 298, 488, 839
Bso31I	GGTCTC	3 cut(s)	794, 1028, 1140
Bsp119I	TTCGAA	1 cut(s)	58
Bsp1286I	GDGCHC	3 cut(s)	708, 901, 1286
Bsp143I	GATC	3 cut(s)	332, 424, 474
BspACI	CCGC	4 cut(s)	184, 518, 879, 1041
BspANI	GGCC	5 cut(s)	94, 113, 298, 488, 839
BspCNI	CTCAG	3 cut(s)	391, 490, 818
BspFNI	CGCG	2 cut(s)	666, 881
BspHI	TCATGA	3 cut(s)	274, 378, 846
BspLI	GGNNCC	3 cut(s)	283, 1283, 1390
BspMAI	CTGCAG	1 cut(s)	1082
BspMI	ACCTGC	1 cut(s)	1297
BspPI	GGATC	3 cut(s)	340, 432, 469
BspQI	GCTCTTC	1 cut(s)	1211
BspT104I	TTCGAA	1 cut(s)	58
BspT107I	GGYRCC	1 cut(s)	1281
BspTNI	GGTCTC	3 cut(s)	794, 1028, 1140
BsrBI	CCGCTC	1 cut(s)	518
BsrDI	GCAATG	2 cut(s)	996, 1301
BsrI	ACTGG	6 cut(s)	119, 374, 426, 1163, 1222, 1339
BssECI	CCNNGG	3 cut(s)	89, 489, 1285
BssMI	GATC	3 cut(s)	332, 424, 474
BssT1I	CCWWGG	1 cut(s)	489
Bst2UI	CCWGG	1 cut(s)	1287
Bst6I	CTCTTC	3 cut(s)	444, 1211, 1270
BstAPI	GCANNNNNTGC	1 cut(s)	1312
BstBI	TTCGAA	1 cut(s)	58
BstC8I	GCNNGC	2 cut(s)	296, 1078
BstDEI	CTNAG	3 cut(s)	399, 498, 805
BstF5I	GGATG	2 cut(s)	875, 1234
BstFNI	CGCG	2 cut(s)	666, 881
BstKTI	GATC	3 cut(s)	335, 427, 477
BstMAI	GTCTC	5 cut(s)	46, 707, 794, 1028, 1140
BstMBI	GATC	3 cut(s)	332, 424, 474
BstMWI	GCNNNNNNNGC	4 cut(s)	494, 500, 1089, 1312
BstNI	CCWGG	1 cut(s)	1287
BstSCI	CCNGG	1 cut(s)	1285
BstSFI	CTRYAG	1 cut(s)	1078
BstSLI	GKGCMC	2 cut(s)	901, 1286
BstUI	CGCG	2 cut(s)	666, 881
BstV1I	GCAGC	6 cut(s)	506, 847, 1055, 1092, 1252, 1340
BstV2I	GAAGAC	2 cut(s)	801, 1209
BstXI	CCANNNNNNTGG	1 cut(s)	52
BsuI	GTATCC	1 cut(s)	865
BsuRI	GGCC	5 cut(s)	94, 113, 298, 488, 839
BtsCI	GGATG	2 cut(s)	875, 1234
BtsIMutI	CAGTG	3 cut(s)	419, 1156, 1346
BveI	ACCTGC	1 cut(s)	1297
Cac8I	GCNNGC	2 cut(s)	296, 1078
CciI	TCATGA	3 cut(s)	274, 378, 846
Cfr13I	GGNCC	2 cut(s)	297, 362
Csp6I	GTAC	2 cut(s)	467, 983
CviAII	CATG	5 cut(s)	250, 275, 379, 446, 847
CviQI	GTAC	2 cut(s)	467, 983
DdeI	CTNAG	3 cut(s)	399, 498, 805
DpnI	GATC	3 cut(s)	334, 426, 476
DpnII	GATC	3 cut(s)	332, 424, 474
Eam1104I	CTCTTC	3 cut(s)	444, 1211, 1270
EarI	CTCTTC	3 cut(s)	444, 1211, 1270
Eco130I	CCWWGG	1 cut(s)	489
Eco147I	AGGCCT	1 cut(s)	839
Eco31I	GGTCTC	3 cut(s)	794, 1028, 1140
Eco47I	GGWCC	1 cut(s)	362
Eco57I	CTGAAG	1 cut(s)	1221
EcoO109I	RGGNCCY	1 cut(s)	297
EcoRII	CCWGG	1 cut(s)	1285
EcoT14I	CCWWGG	1 cut(s)	489
ErhI	CCWWGG	1 cut(s)	489
FaeI	CATG	5 cut(s)	253, 278, 382, 449, 850
FaqI	GGGAC	1 cut(s)	880
FatI	CATG	5 cut(s)	249, 274, 378, 445, 846
FauI	CCCGC	1 cut(s)	1048
FauNDI	CATATG	1 cut(s)	328
Fnu4HI	GCNGC	8 cut(s)	184, 495, 519, 861, 1044, 1081, 1241, 1329
FokI	GGATG	2 cut(s)	862, 1241
Fsp4HI	GCNGC	8 cut(s)	184, 495, 519, 861, 1044, 1081, 1241, 1329
FspBI	CTAG	3 cut(s)	180, 902, 980
GluI	GCNGC	8 cut(s)	184, 495, 519, 861, 1044, 1081, 1241, 1329
GsaI	CCCAGC	1 cut(s)	867
GsuI	CTGGAG	1 cut(s)	274
HaeIII	GGCC	5 cut(s)	94, 113, 298, 488, 839
HapII	CCGG	3 cut(s)	245, 442, 1184
Hin1II	CATG	5 cut(s)	253, 278, 382, 449, 850
HincII	GTYRAC	2 cut(s)	456, 1068
HindII	GTYRAC	2 cut(s)	456, 1068
HindIII	AAGCTT	1 cut(s)	162
HinfI	GANTC	6 cut(s)	199, 271, 956, 989, 1064, 1099
HpaII	CCGG	3 cut(s)	245, 442, 1184
HphI	GGTGA	5 cut(s)	61, 149, 234, 628, 752
Hpy166II	GTNNAC	2 cut(s)	456, 1068
Hpy188I	TCNGA	7 cut(s)	81, 340, 400, 479, 793, 808, 994
Hpy188III	TCNNGA	5 cut(s)	268, 275, 379, 607, 847
Hpy8I	GTNNAC	2 cut(s)	456, 1068
HpyCH4IV	ACGT	1 cut(s)	671
HpyCH4V	TGCA	7 cut(s)	634, 755, 1080, 1301, 1306, 1315, 1328
HpyF10VI	GCNNNNNNNGC	4 cut(s)	494, 500, 1089, 1312
HpyF3I	CTNAG	3 cut(s)	399, 498, 805
HpySE526I	ACGT	1 cut(s)	671
Hsp92II	CATG	5 cut(s)	253, 278, 382, 449, 850
Kzo9I	GATC	3 cut(s)	332, 424, 474
LguI	GCTCTTC	1 cut(s)	1211
LmnI	GCTCC	5 cut(s)	358, 435, 515, 703, 1368
Lsp1109I	GCAGC	6 cut(s)	506, 847, 1055, 1092, 1252, 1340
LweI	GCATC	2 cut(s)	583, 742
MaeI	CTAG	3 cut(s)	180, 902, 980
MaeII	ACGT	1 cut(s)	671
MaeIII	GTNAC	1 cut(s)	1195
MalI	GATC	3 cut(s)	334, 426, 476
MbiI	CCGCTC	1 cut(s)	518
MboI	GATC	3 cut(s)	332, 424, 474
MfeI	CAATTG	1 cut(s)	470
MhlI	GDGCHC	3 cut(s)	708, 901, 1286
MluCI	AATT	7 cut(s)	11, 75, 150, 374, 470, 951, 1053
MlyI	GAGTC	3 cut(s)	265, 950, 1073
MmeI	TCCRAC	3 cut(s)	493, 946, 1206
MseI	TTAA	4 cut(s)	149, 654, 759, 1052
MspA1I	CMGCKG	1 cut(s)	497
MspI	CCGG	3 cut(s)	245, 442, 1184
MspR9I	CCNGG	1 cut(s)	1287
MunI	CAATTG	1 cut(s)	470
MvaI	CCWGG	1 cut(s)	1287
MvnI	CGCG	2 cut(s)	666, 881
MwoI	GCNNNNNNNGC	4 cut(s)	494, 500, 1089, 1312
NdeI	CATATG	1 cut(s)	328
NdeII	GATC	3 cut(s)	332, 424, 474
NlaIII	CATG	5 cut(s)	253, 278, 382, 449, 850
NlaIV	GGNNCC	3 cut(s)	283, 1283, 1390
NmeAIII	GCCGAG	1 cut(s)	70
NmuCI	GTSAC	1 cut(s)	1195
NspV	TTCGAA	1 cut(s)	58
PagI	TCATGA	3 cut(s)	274, 378, 846
PceI	AGGCCT	1 cut(s)	839
PciSI	GCTCTTC	1 cut(s)	1211
PcsI	WCGNNNNNNNCGW	1 cut(s)	789
PfeI	GAWTC	3 cut(s)	199, 989, 1099
PflMI	CCANNNNNTGG	2 cut(s)	125, 1158
PkrI	GCNGC	8 cut(s)	185, 496, 520, 862, 1045, 1082, 1242, 1330
PleI	GAGTC	3 cut(s)	265, 950, 1072
PpsI	GAGTC	3 cut(s)	265, 950, 1072
PshBI	ATTAAT	1 cut(s)	1052
Psp6I	CCWGG	1 cut(s)	1285
PspFI	CCCAGC	1 cut(s)	863
PspGI	CCWGG	1 cut(s)	1285
PspN4I	GGNNCC	3 cut(s)	283, 1283, 1390
PspPI	GGNCC	2 cut(s)	297, 362
PstI	CTGCAG	1 cut(s)	1082
PvuII	CAGCTG	1 cut(s)	497
RsaI	GTAC	2 cut(s)	468, 984
RsaNI	GTAC	2 cut(s)	467, 983
SapI	GCTCTTC	1 cut(s)	1211
SaqAI	TTAA	4 cut(s)	149, 654, 759, 1052
SatI	GCNGC	8 cut(s)	184, 495, 519, 861, 1044, 1081, 1241, 1329
Sau3AI	GATC	3 cut(s)	332, 424, 474
Sau96I	GGNCC	2 cut(s)	297, 362
SchI	GAGTC	3 cut(s)	265, 950, 1073
ScrFI	CCNGG	1 cut(s)	1287
SduI	GDGCHC	3 cut(s)	708, 901, 1286
SfaNI	GCATC	2 cut(s)	583, 742
SfcI	CTRYAG	1 cut(s)	1078
SfuI	TTCGAA	1 cut(s)	58
SinI	GGWCC	1 cut(s)	362
SmlI	CTYRAG	1 cut(s)	266
SmoI	CTYRAG	1 cut(s)	266
SpeI	ACTAGT	1 cut(s)	979
Sse9I	AATT	7 cut(s)	11, 75, 150, 374, 470, 951, 1053
SseBI	AGGCCT	1 cut(s)	839
SsiI	CCGC	4 cut(s)	184, 518, 879, 1041
SspMI	CTAG	3 cut(s)	180, 902, 980
StuI	AGGCCT	1 cut(s)	839
StyD4I	CCNGG	1 cut(s)	1285
StyI	CCWWGG	1 cut(s)	489
TaiI	ACGT	1 cut(s)	674
TaqI	TCGA	3 cut(s)	58, 783, 1179
TasI	AATT	7 cut(s)	11, 75, 150, 374, 470, 951, 1053
TatI	WGTACW	1 cut(s)	982
TauI	GCSGC	2 cut(s)	186, 521
TfiI	GAWTC	3 cut(s)	199, 989, 1099
Tru1I	TTAA	4 cut(s)	149, 654, 759, 1052
Tru9I	TTAA	4 cut(s)	149, 654, 759, 1052
TscAI	CASTG	3 cut(s)	426, 1163, 1346
TseFI	GTSAC	1 cut(s)	1195
TseI	GCWGC	6 cut(s)	494, 860, 1043, 1080, 1240, 1328
Tsp45I	GTSAC	1 cut(s)	1195
TspDTI	ATGAA	9 cut(s)	291, 367, 395, 462, 600, 832, 863, 947, 1238
TspGWI	ACGGA	2 cut(s)	884, 1221
TspRI	CASTG	3 cut(s)	426, 1163, 1346
Van91I	CCANNNNNTGG	2 cut(s)	125, 1158
VpaK11BI	GGWCC	1 cut(s)	362
VspI	ATTAAT	1 cut(s)	1052
XapI	RAATTY	3 cut(s)	11, 75, 374
XspI	CTAG	3 cut(s)	180, 902, 980

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.