FvH4_6g22840

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
16530656 .. 16533275
2620 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g22840.t1

Sequence Viewer

Length: 1569 bp
ATGAGCACTCTTTTCCATTCAACCAATATGGCGAATTGCCATGAGTACCTTGTTCTTCTCCTTATATGGTTTGTCTCTTTCATCCTTTTCCGAACCATCTTCACCAAAACTCAAACTCACCATCGTCTGCCTCCGAGTCCTCGTGCCCTTCCCATCATCGGACATCTTCACCTCCTTGGCCGAATCCCTCACCAAGCTCTTCACAAGCTCTCAACCCGACACGGACCCCTAATTCAGCTCTTCTTTGGCTCCATACCCTGTGTCGTCGTTTCCTCACCTGAAATGGCCAGGGAATGCCTGAAAACCAATGAAATATCCTTCTTGAACCGTCCAAAAAGGACCAACGTAGACTATCTTACGTATGGCTCTGCCGATTTTGTCATGGCACCTTATGGACCTTACTGGAAATTCATGAAAAAGCTTTGCATGTCTGAGCTACTTGGGGGTCGAGTCCTAGACCAAAACCTACCAATAAGACAGGAAGAGAGAGAGCGGTTCTTACATTTCATGCTTAAAAAGGCCGGCAAGGGTGAACAAGTAGATGTTGGAGGAGAGCTTCTAAGGTTAACAAATAACATCATCTCGCTGATGGTATTCAATCGAAGGTTTTCAGATGACGATGAAGAAGCACACGAGGTTAGGGAAGTGCTTGAAGAGATGTGTGAACTTGCCGGGAGGTTCAATTTCTCAGATATGTTTTGGTTCTGCAAGAACTTGGACTTGCAAGGATATGCAAAAAGGCTTAAAGACGTGCGTGACAGATATGACAAAATGATGGGAAAGATTATAGAGGAGCATGAGGAAGCAAGAAGGAACAAGAAGAATGATCCATGGAAAGGTGATAACGCAGTGAATTTGCTTGATATTCTGCTTGATATATATGAGGACCAAAGCTCAGAGATTAAATTGACAAGAGAGAACATAAAGGGCTTCATCATGAATATGTTCGGTGCCGGGACTGATACATCATCAGTAACAATAGAATGGGCACTGTCGGAGCTAATCAACCGCCCAGATGTGATGGCTAAAGCAAGAGAAGAGATCGATTCCGTAGTGGGAACCAACAGATTAGTATCAGAATCTGATGTCGTCAACCTTCCCTATCTCCAAGCCATAGTAAAAGAAACACTGAGGCTTCACCCCACCGGCCCAATGATCGTGAGAGAGAGCACCCAACATTGCACCATCGACGGTTATGATATTCCGGCAAAAACCAGAATCTTAGTCAACGTTTGGGCCATCAATAGGGACCCAAAGCACTGGAAGGACCCGCTCGAGTTCATGCCGGAGAGGTTTTGGAAGAGCACACTGGATGTGAGAGGGCAAAGCTTCCAGTTTATGCCGTTTGGGAGTGGAAGAAGAAGCTGCCCTGGAGCTAGTTTAGCTCTTCACGTTGTCCATACAACACTAGCATCTGTAATTCAGTGCTTTGGTTGGAAGGTTGGGGATGGAGCTGCTGGAATTGATGGTAGGGTGGACATGGAAGAAGGACCTGGAATATCACTTCCTAGGGCTAAACCTCTGGTTTGTGTTCCTTCGGTCAGGTTTAGCCCGTTTCCATTAAGCTGA

Protein Analysis

523

Amino Acids

59.68

Weight (kDa)

7.64

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 44 - 484 2.4e-108 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 385, 950
AccBSI CCGCTC 2 cut(s) 493, 1273
AccI GTMKAC 1 cut(s) 348
AciI CCGC 3 cut(s) 493, 1009, 1271
AclI AACGTT 1 cut(s) 1230
AclWI GGATC 1 cut(s) 821
AcoI YGGCCR 2 cut(s) 178, 285
AcsI RAATTY 2 cut(s) 407, 853
AfaI GTAC 1 cut(s) 47
AfiI CCNNNNNNNGG 3 cut(s) 158, 836, 1245
AgsI TTSAA 5 cut(s) 21, 325, 598, 653, 682
AjiI CACGTC 1 cut(s) 751
AjnI CCWGG 3 cut(s) 287, 1369, 1492
Alw21I GWGCWC 3 cut(s) 8, 1172, 1307
Alw26I GTCTC 1 cut(s) 79
AlwI GGATC 1 cut(s) 821
AlwNI CAGNNNCTG 1 cut(s) 1082
Ama87I CYCGRG 1 cut(s) 1274
AoxI GGCC 5 cut(s) 178, 285, 519, 1147, 1236
ApeKI GCWGC 2 cut(s) 1365, 1454
ApoI RAATTY 2 cut(s) 407, 853
Asp700I GAANNNNTTC 2 cut(s) 607, 944
AspA2I CCTAGG 1 cut(s) 1508
AspS9I GGNCC 9 cut(s) 224, 339, 395, 886, 1148, 1236, 1249, 1267, 1490
AsuC2I CCSGG 2 cut(s) 673, 955
AsuHPI GGTGA 8 cut(s) 94, 110, 161, 182, 267, 542, 851, 1130
AvaI CYCGRG 1 cut(s) 1274
AvaII GGWCC 7 cut(s) 224, 339, 395, 886, 1249, 1267, 1490
AvrII CCTAGG 1 cut(s) 1508
BaeGI GKGCMC 2 cut(s) 148, 991
BalI TGGCCA 1 cut(s) 287
BanI GGYRCC 2 cut(s) 385, 950
BauI CACGAG 2 cut(s) 141, 632
Bbv12I GWGCWC 3 cut(s) 8, 1172, 1307
BbvI GCAGC 2 cut(s) 1352, 1441
BceAI ACGGC 1 cut(s) 1327
BciT130I CCWGG 3 cut(s) 289, 1371, 1494
BcnI CCSGG 2 cut(s) 673, 955
BcoDI GTCTC 1 cut(s) 79
BfaI CTAG 4 cut(s) 455, 1377, 1409, 1509
BisI GCNGC 2 cut(s) 1366, 1455
BlnI CCTAGG 1 cut(s) 1508
BlsI GCNGC 2 cut(s) 1367, 1456
Bme1390I CCNGG 5 cut(s) 289, 673, 955, 1371, 1494
Bme18I GGWCC 7 cut(s) 224, 339, 395, 886, 1249, 1267, 1490
BmeT110I CYCGRG 1 cut(s) 1274
BmgBI CACGTC 1 cut(s) 751
BmgT120I GGNCC 9 cut(s) 224, 339, 395, 886, 1148, 1236, 1249, 1267, 1490
BmiI GGNNCC 8 cut(s) 226, 250, 387, 952, 1060, 1250, 1251, 1269
BmrFI CCNGG 5 cut(s) 289, 673, 955, 1371, 1494
BmsI GCATC 1 cut(s) 1421
BpmI CTGGAG 1 cut(s) 1392
BpuMI CCSGG 2 cut(s) 673, 955
Bsa29I ATCGAT 1 cut(s) 1044
BsaAI YACGTR 1 cut(s) 360
BsaBI GATNNNNATC 1 cut(s) 1072
BsaJI CCNNGG 5 cut(s) 175, 288, 830, 1369, 1508
Bsc4I CCNNNNNNNGG 3 cut(s) 158, 836, 1245
Bse118I RCCGGY 2 cut(s) 521, 1145
Bse1I ACTGG 4 cut(s) 407, 1265, 1314, 1333
Bse3DI GCAATG 1 cut(s) 1177
Bse8I GATNNNNATC 1 cut(s) 1072
BseBI CCWGG 3 cut(s) 289, 1371, 1494
BseCI ATCGAT 1 cut(s) 1044
BseDI CCNNGG 5 cut(s) 175, 288, 830, 1369, 1508
BseGI GGATG 3 cut(s) 81, 1318, 1453
BseJI GATNNNNATC 1 cut(s) 1072
BseLI CCNNNNNNNGG 3 cut(s) 158, 836, 1245
BseMI GCAATG 1 cut(s) 1177
BseMII CTCAG 4 cut(s) 423, 702, 909, 1121
BseNI ACTGG 4 cut(s) 407, 1265, 1314, 1333
BseRI GAGGAG 2 cut(s) 564, 806
BseSI GKGCMC 2 cut(s) 148, 991
BseXI GCAGC 2 cut(s) 1352, 1441
BshFI GGCC 5 cut(s) 180, 287, 521, 1149, 1238
BshNI GGYRCC 2 cut(s) 385, 950
BshVI ATCGAT 1 cut(s) 1044
BsiHKAI GWGCWC 3 cut(s) 8, 1172, 1307
BsiHKCI CYCGRG 1 cut(s) 1274
BsiSI CCGG 6 cut(s) 522, 672, 954, 1146, 1205, 1286
BslFI GGGAC 2 cut(s) 970, 1262
BslI CCNNNNNNNGG 3 cut(s) 158, 836, 1245
BsmAI GTCTC 1 cut(s) 79
BsmFI GGGAC 2 cut(s) 970, 1262
BsmI GAATGC 1 cut(s) 299
BsnI GGCC 5 cut(s) 180, 287, 521, 1149, 1238
BsoBI CYCGRG 1 cut(s) 1274
Bsp1286I GDGCHC 5 cut(s) 8, 148, 991, 1172, 1307
Bsp143I GATC 3 cut(s) 826, 1041, 1155
Bsp19I CCATGG 1 cut(s) 830
BspACI CCGC 3 cut(s) 493, 1009, 1271
BspANI GGCC 5 cut(s) 180, 287, 521, 1149, 1238
BspCNI CTCAG 4 cut(s) 424, 701, 908, 1122
BspDI ATCGAT 1 cut(s) 1044
BspHI TCATGA 2 cut(s) 411, 936
BspLI GGNNCC 8 cut(s) 226, 250, 387, 952, 1060, 1250, 1251, 1269
BspPI GGATC 1 cut(s) 821
BspQI GCTCTTC 4 cut(s) 204, 245, 1295, 1392
BspT107I GGYRCC 2 cut(s) 385, 950
BsrBI CCGCTC 2 cut(s) 493, 1273
BsrDI GCAATG 1 cut(s) 1177
BsrFI RCCGGY 2 cut(s) 521, 1145
BsrI ACTGG 4 cut(s) 407, 1265, 1314, 1333
BssAI RCCGGY 2 cut(s) 521, 1145
BssECI CCNNGG 5 cut(s) 175, 288, 830, 1369, 1508
BssMI GATC 3 cut(s) 826, 1041, 1155
BssSI CACGAG 2 cut(s) 141, 632
BssT1I CCWWGG 3 cut(s) 175, 830, 1508
Bst2BI CACGAG 2 cut(s) 141, 632
Bst2UI CCWGG 3 cut(s) 289, 1371, 1494
Bst4CI ACNGT 3 cut(s) 329, 993, 1193
Bst6I CTCTTC 7 cut(s) 204, 245, 477, 648, 1032, 1295, 1392
BstBAI YACGTR 1 cut(s) 360
BstC8I GCNNGC 1 cut(s) 523
BstDEI CTNAG 6 cut(s) 432, 560, 688, 895, 1130, 1222
BstDSI CCRYGG 1 cut(s) 830
BstF5I GGATG 3 cut(s) 81, 1318, 1453
BstKTI GATC 3 cut(s) 829, 1044, 1158
BstMAI GTCTC 1 cut(s) 79
BstMBI GATC 3 cut(s) 826, 1041, 1155
BstMWI GCNNNNNNNGC 1 cut(s) 1382
BstNI CCWGG 3 cut(s) 289, 1371, 1494
BstNSI RCATGY 1 cut(s) 430
BstSCI CCNGG 5 cut(s) 287, 671, 953, 1369, 1492
BstSLI GKGCMC 2 cut(s) 148, 991
BstSNI TACGTA 1 cut(s) 360
BstV1I GCAGC 2 cut(s) 1352, 1441
BstXI CCANNNNNNTGG 1 cut(s) 1260
Bsu15I ATCGAT 1 cut(s) 1044
BsuRI GGCC 5 cut(s) 180, 287, 521, 1149, 1238
BsuTUI ATCGAT 1 cut(s) 1044
BtgI CCRYGG 1 cut(s) 830
BtrI CACGTC 1 cut(s) 751
BtsCI GGATG 3 cut(s) 81, 1318, 1453
BtsI GCAGTG 1 cut(s) 855
BtsIMutI CAGTG 6 cut(s) 855, 989, 1127, 1258, 1307, 1430
Cac8I GCNNGC 1 cut(s) 523
CaiI CAGNNNCTG 1 cut(s) 1082
CciI TCATGA 2 cut(s) 411, 936
Cfr10I RCCGGY 2 cut(s) 521, 1145
Cfr13I GGNCC 9 cut(s) 224, 339, 395, 886, 1148, 1236, 1249, 1267, 1490
ClaI ATCGAT 1 cut(s) 1044
Csp6I GTAC 1 cut(s) 46
CviQI GTAC 1 cut(s) 46
DdeI CTNAG 6 cut(s) 432, 560, 688, 895, 1130, 1222
DpnI GATC 3 cut(s) 828, 1043, 1157
DpnII GATC 3 cut(s) 826, 1041, 1155
EaeI YGGCCR 2 cut(s) 178, 285
Eam1104I CTCTTC 7 cut(s) 204, 245, 477, 648, 1032, 1295, 1392
EarI CTCTTC 7 cut(s) 204, 245, 477, 648, 1032, 1295, 1392
Eco105I TACGTA 1 cut(s) 360
Eco130I CCWWGG 3 cut(s) 175, 830, 1508
Eco47I GGWCC 7 cut(s) 224, 339, 395, 886, 1249, 1267, 1490
Eco88I CYCGRG 1 cut(s) 1274
EcoO109I RGGNCCY 3 cut(s) 1249, 1267, 1490
EcoRII CCWGG 3 cut(s) 287, 1369, 1492
EcoT14I CCWWGG 3 cut(s) 175, 830, 1508
ErhI CCWWGG 3 cut(s) 175, 830, 1508
FaqI GGGAC 2 cut(s) 970, 1262
FauI CCCGC 1 cut(s) 1278
FblI GTMKAC 1 cut(s) 348
Fnu4HI GCNGC 2 cut(s) 1366, 1455
FokI GGATG 3 cut(s) 68, 1325, 1460
Fsp4HI GCNGC 2 cut(s) 1366, 1455
FspBI CTAG 4 cut(s) 455, 1377, 1409, 1509
GluI GCNGC 2 cut(s) 1366, 1455
GsuI CTGGAG 1 cut(s) 1392
HaeIII GGCC 5 cut(s) 180, 287, 521, 1149, 1238
HapII CCGG 6 cut(s) 522, 672, 954, 1146, 1205, 1286
HincII GTYRAC 3 cut(s) 567, 1093, 1228
HindII GTYRAC 3 cut(s) 567, 1093, 1228
HindIII AAGCTT 2 cut(s) 419, 1327
HinfI GANTC 6 cut(s) 136, 183, 450, 1046, 1079, 1218
HpaI GTTAAC 1 cut(s) 567
HpaII CCGG 6 cut(s) 522, 672, 954, 1146, 1205, 1286
HphI GGTGA 8 cut(s) 94, 110, 161, 182, 267, 542, 851, 1130
Hpy166II GTNNAC 7 cut(s) 349, 533, 567, 665, 1093, 1228, 1477
Hpy188III TCNNGA 4 cut(s) 322, 412, 937, 1159
Hpy8I GTNNAC 7 cut(s) 349, 533, 567, 665, 1093, 1228, 1477
Hpy99I CGWCG 2 cut(s) 269, 1193
HpyAV CCTTC 9 cut(s) 158, 328, 597, 804, 1106, 1258, 1432, 1481, 1545
HpyCH4III ACNGT 3 cut(s) 329, 993, 1193
HpyCH4IV ACGT 5 cut(s) 345, 359, 750, 1230, 1392
HpyCH4V TGCA 5 cut(s) 426, 708, 724, 734, 1182
HpyF10VI GCNNNNNNNGC 1 cut(s) 1382
HpyF3I CTNAG 6 cut(s) 432, 560, 688, 895, 1130, 1222
HpySE526I ACGT 5 cut(s) 345, 359, 750, 1230, 1392
KflI GGGWCCC 1 cut(s) 1249
KroI GCCGGC 1 cut(s) 521
KroNI GCCGGC 1 cut(s) 523
KspAI GTTAAC 1 cut(s) 567
Kzo9I GATC 3 cut(s) 826, 1041, 1155
LguI GCTCTTC 4 cut(s) 204, 245, 1295, 1392
LmnI GCTCC 5 cut(s) 254, 793, 997, 1373, 1451
Lsp1109I GCAGC 2 cut(s) 1352, 1441
LweI GCATC 1 cut(s) 1421
MaeI CTAG 4 cut(s) 455, 1377, 1409, 1509
MaeII ACGT 5 cut(s) 345, 359, 750, 1230, 1392
MaeIII GTNAC 2 cut(s) 755, 973
MalI GATC 3 cut(s) 828, 1043, 1157
MbiI CCGCTC 2 cut(s) 493, 1273
MboI GATC 3 cut(s) 826, 1041, 1155
MhlI GDGCHC 5 cut(s) 8, 148, 991, 1172, 1307
MlsI TGGCCA 1 cut(s) 287
MluCI AATT 8 cut(s) 34, 231, 407, 682, 853, 905, 1419, 1461
MluNI TGGCCA 1 cut(s) 287
MlyI GAGTC 2 cut(s) 145, 459
MmeI TCCRAC 3 cut(s) 526, 975, 1415
Mox20I TGGCCA 1 cut(s) 287
MroNI GCCGGC 1 cut(s) 521
MroXI GAANNNNTTC 2 cut(s) 607, 944
MscI TGGCCA 1 cut(s) 287
MseI TTAA 5 cut(s) 513, 566, 744, 903, 1562
MslI CAYNNNNRTG 1 cut(s) 941
Msp20I TGGCCA 1 cut(s) 287
MspI CCGG 6 cut(s) 522, 672, 954, 1146, 1205, 1286
MspR9I CCNGG 5 cut(s) 289, 673, 955, 1371, 1494
Mva1269I GAATGC 1 cut(s) 299
MvaI CCWGG 3 cut(s) 289, 1371, 1494
MwoI GCNNNNNNNGC 1 cut(s) 1382
NaeI GCCGGC 1 cut(s) 523
NciI CCSGG 2 cut(s) 673, 955
NcoI CCATGG 1 cut(s) 830
NdeII GATC 3 cut(s) 826, 1041, 1155
NgoMIV GCCGGC 1 cut(s) 521
NlaIV GGNNCC 8 cut(s) 226, 250, 387, 952, 1060, 1250, 1251, 1269
NmuCI GTSAC 1 cut(s) 755
NspI RCATGY 1 cut(s) 430
PaeR7I CTCGAG 1 cut(s) 1274
PagI TCATGA 2 cut(s) 411, 936
PciSI GCTCTTC 4 cut(s) 204, 245, 1295, 1392
PctI GAATGC 1 cut(s) 299
PdiI GCCGGC 1 cut(s) 523
PdmI GAANNNNTTC 2 cut(s) 607, 944
PfeI GAWTC 4 cut(s) 183, 1046, 1079, 1218
PkrI GCNGC 2 cut(s) 1367, 1456
PleI GAGTC 2 cut(s) 144, 458
PpsI GAGTC 2 cut(s) 144, 458
Ppu21I YACGTR 1 cut(s) 360
PpuMI RGGWCCY 3 cut(s) 1249, 1267, 1490
Psp1406I AACGTT 1 cut(s) 1230
Psp5II RGGWCCY 3 cut(s) 1249, 1267, 1490
Psp6I CCWGG 3 cut(s) 287, 1369, 1492
PspGI CCWGG 3 cut(s) 287, 1369, 1492
PspN4I GGNNCC 8 cut(s) 226, 250, 387, 952, 1060, 1250, 1251, 1269
PspPI GGNCC 9 cut(s) 224, 339, 395, 886, 1148, 1236, 1249, 1267, 1490
PspPPI RGGWCCY 3 cut(s) 1249, 1267, 1490
PspXI VCTCGAGB 1 cut(s) 1274
PstNI CAGNNNCTG 1 cut(s) 1082
RsaI GTAC 1 cut(s) 47
RsaNI GTAC 1 cut(s) 46
RseI CAYNNNNRTG 1 cut(s) 941
SapI GCTCTTC 4 cut(s) 204, 245, 1295, 1392
SaqAI TTAA 5 cut(s) 513, 566, 744, 903, 1562
SatI GCNGC 2 cut(s) 1366, 1455
Sau3AI GATC 3 cut(s) 826, 1041, 1155
Sau96I GGNCC 9 cut(s) 224, 339, 395, 886, 1148, 1236, 1249, 1267, 1490
SchI GAGTC 2 cut(s) 145, 459
ScrFI CCNGG 5 cut(s) 289, 673, 955, 1371, 1494
SduI GDGCHC 5 cut(s) 8, 148, 991, 1172, 1307
SfaNI GCATC 1 cut(s) 1421
Sfr274I CTCGAG 1 cut(s) 1274
SinI GGWCC 7 cut(s) 224, 339, 395, 886, 1249, 1267, 1490
SlaI CTCGAG 1 cut(s) 1274
SmiMI CAYNNNNRTG 1 cut(s) 941
SmlI CTYRAG 1 cut(s) 1274
SmoI CTYRAG 1 cut(s) 1274
SnaBI TACGTA 1 cut(s) 360
Sse9I AATT 8 cut(s) 34, 231, 407, 682, 853, 905, 1419, 1461
SsiI CCGC 3 cut(s) 493, 1009, 1271
SspMI CTAG 4 cut(s) 455, 1377, 1409, 1509
StyD4I CCNGG 5 cut(s) 287, 671, 953, 1369, 1492
StyI CCWWGG 3 cut(s) 175, 830, 1508
TaaI ACNGT 3 cut(s) 329, 993, 1193
TaiI ACGT 5 cut(s) 348, 362, 753, 1233, 1395
TaqI TCGA 5 cut(s) 448, 601, 1044, 1188, 1275
TaqII GACCGA 1 cut(s) 1528
TasI AATT 8 cut(s) 34, 231, 407, 682, 853, 905, 1419, 1461
TfiI GAWTC 4 cut(s) 183, 1046, 1079, 1218
Tru1I TTAA 5 cut(s) 513, 566, 744, 903, 1562
Tru9I TTAA 5 cut(s) 513, 566, 744, 903, 1562
TscAI CASTG 6 cut(s) 855, 996, 1134, 1265, 1314, 1430
TseFI GTSAC 1 cut(s) 755
TseI GCWGC 2 cut(s) 1365, 1454
Tsp45I GTSAC 1 cut(s) 755
TspDTI ATGAA 9 cut(s) 70, 324, 400, 428, 496, 636, 922, 953, 1270
TspGWI ACGGA 2 cut(s) 237, 1039
TspRI CASTG 6 cut(s) 855, 996, 1134, 1265, 1314, 1430
VpaK11BI GGWCC 7 cut(s) 224, 339, 395, 886, 1249, 1267, 1490
XapI RAATTY 2 cut(s) 407, 853
XceI RCATGY 1 cut(s) 430
XhoI CTCGAG 1 cut(s) 1274
XmaJI CCTAGG 1 cut(s) 1508
XmiI GTMKAC 1 cut(s) 348
XmnI GAANNNNTTC 2 cut(s) 607, 944
XspI CTAG 4 cut(s) 455, 1377, 1409, 1509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.