Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0008593

Physical Location & Seq

Genomic Coordinates Forward (+)

18039692 .. 18043000

Gene Structure 3309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g24010.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGGAGGCGCGAAACTCACCTTCGTCGGATTCATATGCCCTTCTCCTCCAAGCATGCCTAAACAAGAGACACCCATTTGCCGGAAAAACCATCCACGCCCAGATCATCAAGTCAGGGCTTCACCTCGGTGTCTTCTTGATGAACAACCTCATCAACTACTATATCAAAACTGGGTCTTATGTCGATGCACACCACGTGTTCGATGAAATGCCTCTAAGAAACAGGTTCTCCTGGAACACCATTCTCTCGAATTATACAAAGCAGGGAAGGCTTGATGCGGCTTGTAGAGTTTTCAATGCAATGCCTGAGCGTGATTCGGTTTCGTGGACTGCCATGATTGTGGGTTTCAATCAGATGGGTCGATATGGCGATGCCATCAACATGTTTTTAGAGATGGTTTTGGATGGAGTTCCGGTGACCCAGTTCACTTTTACTAACATTCTTTCGGCGTGCGCGTCGGTGAAGGGTTTGGATATTGGTAGGAAGGTGCATTCGTTTGTTGTCAAGCTTGCTGTTGGTAGTTATGTTTCGGTTGGGAACTGCCTTGTGAACATGTATGCCAAATGCGGTGATCCGGGGACTGCGAAGATTGTGTTTGAGAGGATGAGATTGAAAAACGTGTCGAGTTGGAATCATATGATCTCAATACATATGCAATGTGGTCGTGCCGACCTTGCTCTTGCGCAGTTTAATCAAATGACAGAGCACGACATTGTATCTTGGAATTCAATGATTGCTGGATATAATCAGCATGGGCTCCATACAGAAGCAGTGAGTATATTCTCAAGTATGCGCAAGGACTCTTTTCTAAAGCCTGATAAGTTCACCTTGGCAAGCATTTTGTCGGCTTGTGCTAGCCTTGAGAAGTTGGAACTTGGAAAACAAATCCATGCTCTTATTGTAAGAGCTGGATTGGACACGTCGGAAGTTGTAGTTAATGCTTTGATTTCAATGTATGCCAAGTCTGGTGGGTTGGAAATTGCCGAGAAAGTTTTAGAGCAGTGCGGGACTTCAGATCTCAATCTTATAGCTTTTACTGCCTTATTGGATGGATACATTAAGGTTGGGGATGTTAACCCAGCCAGACAGATATTTGACTCATTGAGAGACTGTGATGTGGTAGCATGGACCGCTATGATTGTTGGTTATATGCAGAATGGGTTAAATAATGATGCATTGGAGCTCTTTAGGTCAATGATAGCAGAAGGCCCCAGGCCAAACAACTACACATTAGCAGCGATGTTGAGCGTCAGTTCAAGCTTGGCTTCTTTGGATTATGGAAAACAAATTCATGCAACTGCCATACGAACAGGACAAGTGTCTTCAGTTTCTGTGGGCAATGCTCTAATTACGATGTATTCCAAAGCTGGAAGCATCAGTGGTGCAAAGCAAGTGTTCAATCTGATTGACTGGAACAGAGATACTGTTTCTTGGAGTTCAATGATATTGGCCCTGGCTCAACATGGTCTTGGGGAAGAATCCATTGAACTATTTGAGAAGATGTTGTCACTTGGTATTAGGCCTGACCATATAACTTATGTTGGGGTACTCTCTGCTTGTACACATGTGGGATTGGTCGAACAGGGCAGGAGCTACTATAATTTGATGAGGAGCGTACACAAGATTGAACCCACCCATAGCCATTATGCATGCATGGTTGATCTGCTTGGGCGTGCTGGGTTACTTCAAGAAGCATACGACGTGATACAAAATATGCCAATTGAACCGGACATTATAGCATGGGGTTCACTTTTATCTGCTTGTAAGCTTCACAAAAATGTGTATTTGGCCAAAGTTGCAGCAGAAAAATTGCTCCTTATTGAACCAGACAACAGTGGGGCGTATTCAGCCCTTGCTAATTTGTATTCAGCTTGTGGAAGATGGGCAGATGCTGCAGAAGTAAGAAAGTTAATGAAGAATAGGAAAGTGAAGAAAGGCCAAGGATTTAGTTGGATTGAGTATCAGAACAAAGTGCATGTGTTTGGGGTTGACGATTGGGTTCATCCACAGAGAAATGGAATCTATAAGACGATGGAGAAAATCTGGGAAGAGATTAAAAATATTGGTTTTGTCCCTGATACTGAGTCGGTCTTGCATGATGTTGCAGAAGAATTGAAGGAGAAGATGCTTATGCATCACAGTGAGAAACTTGCAATTGCATTTGGGTTAATAAATACTCCAGATAACAGTACACTGAGGATCATGAAGAACCTCAGAGTTTGTAATGATTGTCACACTGCCATTAAATTTATATCCAAGCTTGTGGGCAGAGAAATCATTCTGAGAGACACTACTCGCTTTCACCATTTTAAGAATGGGACGTGTTCTTGTCGGGACTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

782

Amino Acids

86.94

Weight (kDa)

8.18

Isoelectric Point (pI)

36.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	105 - 152	6.1e-08	PPR repeat family
PPR_2	PF13041	237 - 285	9.3e-09	PPR repeat family
PPR	PF01535	239 - 268	4.1e-07	PPR repeat
PPR_2	PF13041	372 - 415	3.7e-09	PPR repeat family
PPR_2	PF13041	473 - 520	6.7e-09	PPR repeat family
PPR	PF01535	476 - 506	7.3e-07	PPR repeat
E_motif	PF20431	591 - 653	2.8e-16	E motif
DYW_deaminase	PF14432	689 - 781	2.2e-44	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008593)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22070
fragaria_vesca	FvH4_6g24010 FvH4_6g24010
malus_domestica	MD01G1046800.v1.1 MD16G1282200.v1.1
prunus_persica	Prupe.3G166700_v2.0.a1
pyrus_communis	pycom01g07270
rosa_chinensis	RchiOBHm_Chr2g0115941
rosa_laevigata	RLG00000018225
rosa_multiflora	Rmu_co8514103.1_g000001 Rmu_sc0025044.1_g000002 Rmu_ssc0000197.1_g000005
rosa_roxburghii	Rroxscaffold_2G00127720 Rroxscaffold_2G00128490
rosa_rugosa	Rorug02G0201400 Rorug02G0201500 Rorug02G0201600 Rorug02G0201700
rosa_samantha	Rh2AG258200 Rh2BG269300 Rh2CG264900 Rh2DG266600
rosa_wichuraiana	Rw2G020250

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	684, 794
AccII	CGCG	2 cut(s)	10, 455
AciI	CCGC	4 cut(s)	278, 567, 1005, 1131
AclWI	GGATC	2 cut(s)	566, 2207
AcoI	YGGCCR	1 cut(s)	1788
AcsI	RAATTY	3 cut(s)	724, 1287, 2246
AcuI	CTGAAG	2 cut(s)	996, 1308
AcvI	CACGTG	1 cut(s)	196
AdeI	CACNNNGTG	1 cut(s)	196
AfaI	GTAC	4 cut(s)	1548, 1561, 1617, 2191
AfiI	CCNNNNNNNGG	1 cut(s)	80
AflIII	ACRYGT	7 cut(s)	195, 381, 552, 618, 918, 1564, 2321
AjiI	CACGTC	3 cut(s)	921, 1702, 2322
AjnI	CCWGG	3 cut(s)	230, 1211, 1452
AleI	CACNNNNGTG	1 cut(s)	126
Alw21I	GWGCWC	2 cut(s)	708, 1185
Alw26I	GTCTC	3 cut(s)	61, 1101, 2280
AlwI	GGATC	2 cut(s)	566, 2207
AlwNI	CAGNNNCTG	2 cut(s)	1331, 1892
AoxI	GGCC	6 cut(s)	1207, 1214, 1449, 1520, 1788, 1936
ApeKI	GCWGC	3 cut(s)	1235, 1799, 1892
ApoI	RAATTY	3 cut(s)	724, 1287, 2246
Asp700I	GAANNNNTTC	1 cut(s)	2277
AspLEI	GCGC	4 cut(s)	10, 455, 685, 795
AspS9I	GGNCC	3 cut(s)	1128, 1208, 1450
AsuC2I	CCSGG	1 cut(s)	576
AsuHPI	GGTGA	7 cut(s)	9, 113, 427, 472, 581, 817, 2294
AsuNHI	GCTAGC	1 cut(s)	854
AvaII	GGWCC	1 cut(s)	1128
BalI	TGGCCA	1 cut(s)	1790
BanII	GRGCYC	2 cut(s)	759, 1185
BbrPI	CACGTG	1 cut(s)	196
BbsI	GAAGAC	2 cut(s)	124, 1314
Bbv12I	GWGCWC	2 cut(s)	708, 1185
BbvI	GCAGC	3 cut(s)	1247, 1811, 1879
BccI	CCATC	8 cut(s)	98, 349, 383, 388, 398, 1043, 1875, 2026
BcgI	CGANNNNNNTGC	2 cut(s)	644, 678
BciT130I	CCWGG	3 cut(s)	232, 1213, 1454
BciVI	GTATCC	1 cut(s)	1046
BcnI	CCSGG	1 cut(s)	576
BcoDI	GTCTC	3 cut(s)	61, 1101, 2280
BfaI	CTAG	1 cut(s)	855
BfmI	CTRYAG	1 cut(s)	1893
BfuI	GTATCC	1 cut(s)	1046
BglII	AGATCT	1 cut(s)	1015
BisI	GCNGC	4 cut(s)	279, 1236, 1800, 1893
BlsI	GCNGC	4 cut(s)	280, 1237, 1801, 1894
Bme1390I	CCNGG	4 cut(s)	232, 576, 1213, 1454
Bme18I	GGWCC	1 cut(s)	1128
BmgBI	CACGTC	3 cut(s)	921, 1702, 2322
BmgT120I	GGNCC	3 cut(s)	1128, 1208, 1450
BmiI	GGNNCC	2 cut(s)	758, 1210
BmrFI	CCNGG	4 cut(s)	232, 576, 1213, 1454
BmrI	ACTGGG	2 cut(s)	180, 415
BmsI	GCATC	8 cut(s)	175, 265, 361, 1162, 1383, 1879, 2115, 2143
BmtI	GCTAGC	1 cut(s)	858
BmuI	ACTGGG	2 cut(s)	180, 415
BoxI	GACNNNNGTC	1 cut(s)	1318
BpiI	GAAGAC	2 cut(s)	124, 1314
BpmI	CTGGAG	1 cut(s)	2163
Bpu10I	CCTNAGC	1 cut(s)	306
BpuEI	CTTGAG	2 cut(s)	769, 881
BpuMI	CCSGG	1 cut(s)	576
BsaAI	YACGTR	1 cut(s)	196
BsaBI	GATNNNNATC	1 cut(s)	1020
BsaJI	CCNNGG	6 cut(s)	124, 575, 828, 1211, 1452, 1939
BsaWI	WCCGGW	2 cut(s)	412, 1726
BsaXI	ACNNNNNCTCC	4 cut(s)	212, 242, 399, 429
Bsc4I	CCNNNNNNNGG	1 cut(s)	80
Bse1I	ACTGG	3 cut(s)	175, 421, 1415
Bse3DI	GCAATG	3 cut(s)	306, 662, 1345
Bse8I	GATNNNNATC	1 cut(s)	1020
BseBI	CCWGG	3 cut(s)	232, 1213, 1454
BseDI	CCNNGG	6 cut(s)	124, 575, 828, 1211, 1452, 1939
BseGI	GGATG	6 cut(s)	90, 409, 609, 1054, 1075, 2002
BseJI	GATNNNNATC	1 cut(s)	1020
BseLI	CCNNNNNNNGG	1 cut(s)	80
BseMI	GCAATG	3 cut(s)	306, 662, 1345
BseMII	CTCAG	5 cut(s)	297, 2073, 2186, 2227, 2273
BseNI	ACTGG	3 cut(s)	175, 421, 1415
BseRI	GAGGAG	2 cut(s)	35, 1624
BseXI	GCAGC	3 cut(s)	1247, 1811, 1879
BseYI	CCCAGC	2 cut(s)	1078, 1676
Bsh1236I	CGCG	2 cut(s)	10, 455
BshFI	GGCC	6 cut(s)	1209, 1216, 1451, 1522, 1790, 1938
BsiHKAI	GWGCWC	2 cut(s)	708, 1185
BsiSI	CCGG	4 cut(s)	81, 413, 575, 1727
BslFI	GGGAC	4 cut(s)	592, 1021, 2057, 2332
BslI	CCNNNNNNNGG	1 cut(s)	80
BsmAI	GTCTC	3 cut(s)	61, 1101, 2280
BsmFI	GGGAC	4 cut(s)	592, 1021, 2057, 2332
BsmI	GAATGC	1 cut(s)	490
BsnI	GGCC	6 cut(s)	1209, 1216, 1451, 1522, 1790, 1938
Bsp1286I	GDGCHC	3 cut(s)	708, 759, 1185
Bsp1407I	TGTACA	1 cut(s)	1559
Bsp143I	GATC	6 cut(s)	102, 571, 639, 1015, 1660, 2199
BspACI	CCGC	4 cut(s)	278, 567, 1005, 1131
BspANI	GGCC	6 cut(s)	1209, 1216, 1451, 1522, 1790, 1938
BspCNI	CTCAG	5 cut(s)	298, 2074, 2187, 2226, 2274
BspFNI	CGCG	2 cut(s)	10, 455
BspHI	TCATGA	1 cut(s)	2202
BspLI	GGNNCC	2 cut(s)	758, 1210
BspMAI	CTGCAG	1 cut(s)	1897
BspOI	GCTAGC	1 cut(s)	858
BspPI	GGATC	2 cut(s)	566, 2207
BsrDI	GCAATG	3 cut(s)	306, 662, 1345
BsrGI	TGTACA	1 cut(s)	1559
BsrI	ACTGG	3 cut(s)	175, 421, 1415
BssECI	CCNNGG	6 cut(s)	124, 575, 828, 1211, 1452, 1939
BssMI	GATC	6 cut(s)	102, 571, 639, 1015, 1660, 2199
BssT1I	CCWWGG	2 cut(s)	828, 1939
Bst2UI	CCWGG	3 cut(s)	232, 1213, 1454
Bst4CI	ACNGT	5 cut(s)	1112, 1426, 1835, 2141, 2189
Bst6I	CTCTTC	1 cut(s)	2043
BstAPI	GCANNNNNTGC	1 cut(s)	1892
BstAUI	TGTACA	1 cut(s)	1559
BstBAI	YACGTR	1 cut(s)	196
BstC8I	GCNNGC	7 cut(s)	55, 451, 510, 835, 856, 1651, 1674
BstDEI	CTNAG	6 cut(s)	215, 306, 2082, 2195, 2213, 2282
BstEII	GGTNACC	1 cut(s)	415
BstF5I	GGATG	6 cut(s)	90, 409, 609, 1054, 1075, 2002
BstFNI	CGCG	2 cut(s)	10, 455
BstHHI	GCGC	4 cut(s)	10, 455, 685, 795
BstKTI	GATC	6 cut(s)	105, 574, 642, 1018, 1663, 2202
BstMAI	GTCTC	3 cut(s)	61, 1101, 2280
BstMBI	GATC	6 cut(s)	102, 571, 639, 1015, 1660, 2199
BstMWI	GCNNNNNNNGC	7 cut(s)	268, 674, 1037, 1130, 1796, 1847, 1892
BstNI	CCWGG	3 cut(s)	232, 1213, 1454
BstNSI	RCATGY	6 cut(s)	57, 385, 556, 1568, 1653, 1979
BstPAI	GACNNNNGTC	1 cut(s)	1318
BstPI	GGTNACC	1 cut(s)	415
BstSCI	CCNGG	4 cut(s)	230, 574, 1211, 1452
BstSFI	CTRYAG	1 cut(s)	1893
BstUI	CGCG	2 cut(s)	10, 455
BstV1I	GCAGC	3 cut(s)	1247, 1811, 1879
BstV2I	GAAGAC	2 cut(s)	124, 1314
BstX2I	RGATCY	1 cut(s)	1015
BstXI	CCANNNNNNTGG	2 cut(s)	340, 2263
BstYI	RGATCY	1 cut(s)	1015
BsuI	GTATCC	1 cut(s)	1046
BsuRI	GGCC	6 cut(s)	1209, 1216, 1451, 1522, 1790, 1938
BtgZI	GCGATG	2 cut(s)	384, 1253
BtrI	CACGTC	3 cut(s)	921, 1702, 2322
BtsCI	GGATG	6 cut(s)	90, 409, 609, 1054, 1075, 2002
BtsI	GCAGTG	3 cut(s)	777, 1007, 2235
BtsIMutI	CAGTG	7 cut(s)	777, 1007, 1384, 1840, 2146, 2192, 2235
Cac8I	GCNNGC	7 cut(s)	55, 451, 510, 835, 856, 1651, 1674
CaiI	CAGNNNCTG	2 cut(s)	1331, 1892
CciI	TCATGA	1 cut(s)	2202
CfoI	GCGC	4 cut(s)	10, 455, 685, 795
Cfr13I	GGNCC	3 cut(s)	1128, 1208, 1450
CseI	GACGC	2 cut(s)	444, 1237
Csp6I	GTAC	4 cut(s)	1547, 1560, 1616, 2190
CspCI	CAANNNNNGTGG	2 cut(s)	949, 984
CviQI	GTAC	4 cut(s)	1547, 1560, 1616, 2190
DdeI	CTNAG	6 cut(s)	215, 306, 2082, 2195, 2213, 2282
DpnI	GATC	6 cut(s)	104, 573, 641, 1017, 1662, 2201
DpnII	GATC	6 cut(s)	102, 571, 639, 1015, 1660, 2199
DraIII	CACNNNGTG	1 cut(s)	196
EaeI	YGGCCR	1 cut(s)	1788
Eam1104I	CTCTTC	1 cut(s)	2043
EarI	CTCTTC	1 cut(s)	2043
Ecl136II	GAGCTC	1 cut(s)	1183
Eco130I	CCWWGG	2 cut(s)	828, 1939
Eco147I	AGGCCT	1 cut(s)	1522
Eco24I	GRGCYC	2 cut(s)	759, 1185
Eco47I	GGWCC	1 cut(s)	1128
Eco53kI	GAGCTC	1 cut(s)	1183
Eco57I	CTGAAG	2 cut(s)	996, 1308
Eco72I	CACGTG	1 cut(s)	196
Eco91I	GGTNACC	1 cut(s)	415
EcoICRI	GAGCTC	1 cut(s)	1183
EcoO109I	RGGNCCY	1 cut(s)	1208
EcoO65I	GGTNACC	1 cut(s)	415
EcoRI	GAATTC	1 cut(s)	724
EcoRII	CCWGG	3 cut(s)	230, 1211, 1452
EcoT14I	CCWWGG	2 cut(s)	828, 1939
EcoT22I	ATGCAT	4 cut(s)	1177, 1651, 1655, 2136
EcoT38I	GRGCYC	2 cut(s)	759, 1185
ErhI	CCWWGG	2 cut(s)	828, 1939
FalI	AAGNNNNNCTT	4 cut(s)	812, 844, 1249, 1281
FaqI	GGGAC	4 cut(s)	592, 1021, 2057, 2332
FauI	CCCGC	1 cut(s)	998
FauNDI	CATATG	3 cut(s)	34, 636, 651
Fnu4HI	GCNGC	4 cut(s)	279, 1236, 1800, 1893
FokI	GGATG	6 cut(s)	77, 416, 616, 1061, 1082, 1989
FriOI	GRGCYC	2 cut(s)	759, 1185
Fsp4HI	GCNGC	4 cut(s)	279, 1236, 1800, 1893
FspBI	CTAG	1 cut(s)	855
FspI	TGCGCA	2 cut(s)	684, 794
GlaI	GCGC	4 cut(s)	9, 454, 684, 794
GluI	GCNGC	4 cut(s)	279, 1236, 1800, 1893
GsaI	CCCAGC	2 cut(s)	1082, 1680
GsuI	CTGGAG	1 cut(s)	2163
HaeIII	GGCC	6 cut(s)	1209, 1216, 1451, 1522, 1790, 1938
HapII	CCGG	4 cut(s)	81, 413, 575, 1727
HgaI	GACGC	2 cut(s)	444, 1237
HhaI	GCGC	4 cut(s)	10, 455, 685, 795
Hin6I	GCGC	4 cut(s)	8, 453, 683, 793
HinP1I	GCGC	4 cut(s)	8, 453, 683, 793
HincII	GTYRAC	2 cut(s)	1075, 1990
HindII	GTYRAC	2 cut(s)	1075, 1990
HindIII	AAGCTT	4 cut(s)	506, 1258, 1766, 2258
HinfI	GANTC	8 cut(s)	29, 314, 631, 800, 1097, 1478, 2019, 2084
HpaI	GTTAAC	1 cut(s)	1075
HpaII	CCGG	4 cut(s)	81, 413, 575, 1727
HphI	GGTGA	7 cut(s)	9, 113, 427, 472, 581, 817, 2294
Hpy188I	TCNGA	8 cut(s)	28, 354, 925, 1015, 1404, 1965, 2216, 2283
Hpy188III	TCNNGA	6 cut(s)	136, 247, 1688, 2180, 2203, 2333
Hpy99I	CGWCG	4 cut(s)	28, 460, 925, 1703
HpyAV	CCTTC	7 cut(s)	30, 50, 261, 457, 478, 1199, 2110
HpyCH4III	ACNGT	5 cut(s)	1112, 1426, 1835, 2141, 2189
HpyCH4IV	ACGT	5 cut(s)	195, 618, 920, 1701, 2321
HpyF10VI	GCNNNNNNNGC	7 cut(s)	268, 674, 1037, 1130, 1796, 1847, 1892
HpyF3I	CTNAG	6 cut(s)	215, 306, 2082, 2195, 2213, 2282
HpySE526I	ACGT	5 cut(s)	195, 618, 920, 1701, 2321
HspAI	GCGC	4 cut(s)	8, 453, 683, 793
KspAI	GTTAAC	1 cut(s)	1075
Kzo9I	GATC	6 cut(s)	102, 571, 639, 1015, 1660, 2199
LmnI	GCTCC	5 cut(s)	762, 1180, 1590, 1611, 1818
Lsp1109I	GCAGC	3 cut(s)	1247, 1811, 1879
LweI	GCATC	8 cut(s)	175, 265, 361, 1162, 1383, 1879, 2115, 2143
MaeI	CTAG	1 cut(s)	855
MaeII	ACGT	5 cut(s)	195, 618, 920, 1701, 2321
MaeIII	GTNAC	4 cut(s)	415, 1506, 1680, 2231
MalI	GATC	6 cut(s)	104, 573, 641, 1017, 1662, 2201
MboI	GATC	6 cut(s)	102, 571, 639, 1015, 1660, 2199
MfeI	CAATTG	2 cut(s)	1719, 2154
MflI	RGATCY	1 cut(s)	1015
MhlI	GDGCHC	3 cut(s)	708, 759, 1185
MlsI	TGGCCA	1 cut(s)	1790
MluNI	TGGCCA	1 cut(s)	1790
MlyI	GAGTC	3 cut(s)	794, 1091, 2093
MmeI	TCCRAC	6 cut(s)	6, 608, 849, 903, 954, 1931
MnlI	CCTC	8 cut(s)	56, 134, 158, 222, 594, 1602, 2190, 2222
Mox20I	TGGCCA	1 cut(s)	1790
Mph1103I	ATGCAT	4 cut(s)	1177, 1651, 1655, 2136
MroXI	GAANNNNTTC	1 cut(s)	2277
MscI	TGGCCA	1 cut(s)	1790
MslI	CAYNNNNRTG	5 cut(s)	126, 338, 380, 1776, 2139
Msp20I	TGGCCA	1 cut(s)	1790
MspI	CCGG	4 cut(s)	81, 413, 575, 1727
MspR9I	CCNGG	4 cut(s)	232, 576, 1213, 1454
MunI	CAATTG	2 cut(s)	1719, 2154
Mva1269I	GAATGC	1 cut(s)	490
MvaI	CCWGG	3 cut(s)	232, 1213, 1454
MvnI	CGCG	2 cut(s)	10, 455
MwoI	GCNNNNNNNGC	7 cut(s)	268, 674, 1037, 1130, 1796, 1847, 1892
NciI	CCSGG	1 cut(s)	576
NdeI	CATATG	3 cut(s)	34, 636, 651
NdeII	GATC	6 cut(s)	102, 571, 639, 1015, 1660, 2199
NheI	GCTAGC	1 cut(s)	854
NlaIV	GGNNCC	2 cut(s)	758, 1210
NmeAIII	GCCGAG	1 cut(s)	1009
NmuCI	GTSAC	3 cut(s)	415, 1506, 2231
NsbI	TGCGCA	2 cut(s)	684, 794
NsiI	ATGCAT	4 cut(s)	1177, 1651, 1655, 2136
NspI	RCATGY	6 cut(s)	57, 385, 556, 1568, 1653, 1979
OliI	CACNNNNGTG	1 cut(s)	126
PaeI	GCATGC	2 cut(s)	57, 1653
PagI	TCATGA	1 cut(s)	2202
PceI	AGGCCT	1 cut(s)	1522
PciI	ACATGT	3 cut(s)	381, 552, 1564
PcsI	WCGNNNNNNNCGW	1 cut(s)	452
PctI	GAATGC	1 cut(s)	490
PdmI	GAANNNNTTC	1 cut(s)	2277
PfeI	GAWTC	5 cut(s)	29, 314, 631, 1478, 2019
PfoI	TCCNGGA	1 cut(s)	230
PkrI	GCNGC	4 cut(s)	280, 1237, 1801, 1894
PleI	GAGTC	3 cut(s)	794, 1091, 2092
PmaCI	CACGTG	1 cut(s)	196
PmlI	CACGTG	1 cut(s)	196
PpsI	GAGTC	3 cut(s)	794, 1091, 2092
Ppu21I	YACGTR	1 cut(s)	196
PscI	ACATGT	3 cut(s)	381, 552, 1564
PshAI	GACNNNNGTC	1 cut(s)	1318
Psp124BI	GAGCTC	1 cut(s)	1185
Psp6I	CCWGG	3 cut(s)	230, 1211, 1452
PspCI	CACGTG	1 cut(s)	196
PspEI	GGTNACC	1 cut(s)	415
PspFI	CCCAGC	2 cut(s)	1078, 1676
PspGI	CCWGG	3 cut(s)	230, 1211, 1452
PspN4I	GGNNCC	2 cut(s)	758, 1210
PspPI	GGNCC	3 cut(s)	1128, 1208, 1450
PstI	CTGCAG	1 cut(s)	1897
PstNI	CAGNNNCTG	2 cut(s)	1331, 1892
PsuI	RGATCY	1 cut(s)	1015
RsaI	GTAC	4 cut(s)	1548, 1561, 1617, 2191
RsaNI	GTAC	4 cut(s)	1547, 1560, 1616, 2190
RseI	CAYNNNNRTG	5 cut(s)	126, 338, 380, 1776, 2139
SacI	GAGCTC	1 cut(s)	1185
SatI	GCNGC	4 cut(s)	279, 1236, 1800, 1893
Sau3AI	GATC	6 cut(s)	102, 571, 639, 1015, 1660, 2199
Sau96I	GGNCC	3 cut(s)	1128, 1208, 1450
SchI	GAGTC	3 cut(s)	794, 1091, 2093
ScrFI	CCNGG	4 cut(s)	232, 576, 1213, 1454
SduI	GDGCHC	3 cut(s)	708, 759, 1185
SfaNI	GCATC	8 cut(s)	175, 265, 361, 1162, 1383, 1879, 2115, 2143
SfcI	CTRYAG	1 cut(s)	1893
SinI	GGWCC	1 cut(s)	1128
SmiMI	CAYNNNNRTG	5 cut(s)	126, 338, 380, 1776, 2139
SmlI	CTYRAG	2 cut(s)	784, 860
SmoI	CTYRAG	2 cut(s)	784, 860
SphI	GCATGC	2 cut(s)	57, 1653
SseBI	AGGCCT	1 cut(s)	1522
SsiI	CCGC	4 cut(s)	278, 567, 1005, 1131
SspI	AATATT	1 cut(s)	2062
SspMI	CTAG	1 cut(s)	855
SstI	GAGCTC	1 cut(s)	1185
StuI	AGGCCT	1 cut(s)	1522
StyD4I	CCNGG	4 cut(s)	230, 574, 1211, 1452
StyI	CCWWGG	2 cut(s)	828, 1939
TaaI	ACNGT	5 cut(s)	1112, 1426, 1835, 2141, 2189
TaiI	ACGT	5 cut(s)	198, 621, 923, 1704, 2324
TaqI	TCGA	6 cut(s)	183, 201, 248, 361, 623, 1578
TaqII	GACCGA	1 cut(s)	2077
TatI	WGTACW	2 cut(s)	1559, 2189
TauI	GCSGC	1 cut(s)	281
TfiI	GAWTC	5 cut(s)	29, 314, 631, 1478, 2019
TscAI	CASTG	7 cut(s)	777, 1007, 1384, 1840, 2146, 2199, 2242
TseFI	GTSAC	3 cut(s)	415, 1506, 2231
TseI	GCWGC	3 cut(s)	1235, 1799, 1892
Tsp45I	GTSAC	3 cut(s)	415, 1506, 2231
TspDTI	ATGAA	7 cut(s)	21, 155, 219, 1280, 1928, 1991, 2219
TspRI	CASTG	7 cut(s)	777, 1007, 1384, 1840, 2146, 2199, 2242
VpaK11BI	GGWCC	1 cut(s)	1128
XapI	RAATTY	3 cut(s)	724, 1287, 2246
XceI	RCATGY	6 cut(s)	57, 385, 556, 1568, 1653, 1979
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2312
XmnI	GAANNNNTTC	1 cut(s)	2277
XspI	CTAG	1 cut(s)	855
Zsp2I	ATGCAT	4 cut(s)	1177, 1651, 1655, 2136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.