Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0008593

Physical Location & Seq

Genomic Coordinates Reverse (-)

18550730 .. 18553883

Gene Structure 3154 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G166700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2358 bp

ATGGAAGCCCCAAAGCCGCCCTCCCTTGCCACTTCTTCGGATTCCTACGCATTTCACCTACAAGCATGCGTCAGAAAGAGAGACTTATTTTCCGGGAAATCAATCCATGCCCAAATCATCAAATCCGGGCTTCACTTCGGAGTGTTCTTAATGAATAACCTTATGAACATGTACGTGAAAACTGGGTATTCTTTGGATGCTCACCGTGTGTTTGAGGAAATGCCTGTGAGGAATACACTTTCCTGGAATGCGATTCTCTCTGCTTATGCAAAGCAGGGAAAATTTGATGCAGCACTTAGAGTTTTCAATGAAATGCCTGAACGCGACTCTGTTTCATGGACTTCCATGATCGTGGGTTACAATCAGATGGGTCGTTTTGGTAATGCTATTCAGATGTTTGTAGATATGATTTCAGATGGAGTTACGGTGACCCAGTTCACGATTACTAATATTCTTTCCGCATGTGCTGCTGTTAAAGCTTTGGATGTTGGTAGGAAGGTTCATTCGTTTGTTGTTAAACTTGCAGTTGGTAGTTATGTTTCTGTTGCAAACTGTCTTCTAAACATGTATGCAAAATCTGGTGATCCAAGGACAGCAAAGATTGTTTTTGATAGGATAAGATTGACAAACACATCGAGCTGGAATGCTATGATTTCTTTGCATATGCAATGTGGTCGTGCTGACCTTGCTATTGTTCAGTTTAAGCAAATGACAGAACGCGACGTCGTTTCTTGGAATTCAATGATTGCAGGATACAATCAGCATGGGCTTGATATGGAGGCACTGACTATCTTCTCAAGTATGCTCAAGGATTCTTTTCTAAAGCCCGACAAGTTCACTTTGTCAAGTGTTTTGTCAGCTTGTGCTAACCTTGAGAAGTTGGAAATCGGGAGACAAATCCATGCTCTTATTATAACAGCTGAGCTTGACACATCCCAAGCAGTGAAAAATGCTTTGATCTCAATGTATGCTAAGTCTGGTGGGTTGGAAATTGCTCAAAAGGTTTTAGAGCAATGTGTGACTTCAGACCTCAATGTTATAGCTTTTACTGCCCTATTGGATGGATACATAAAGCTTGGGGATATAAACCCAGCCAGACAGATATTTGATTCATTGAGAGACCGTGACGTGGTTGCATGGACAGCAATGATTGTTGGTTATGTGCAAAATGGGTTGAATGATGATGCTTTGGAGCTCTTCAGGGAGATGATAAATGAAGGCCCCAGACCAAACAGCTACACGTTAGCAGCTATGTTAAGTGTCAGTTCAAGCATGGCTTCTTTAGACTATGGTAAACAAATTCATGCAAGTGCCATGAGGTTAGGGGAAGTGTCCTCAGTTTCTGTGAGTAATGCTCTAATTTCAATGTATTCCAAAGCTGGAAGCATCAGTGGTGCAAAGCAAATATTCAATCTGGTTCACCGGAACAGAGATACTGTTTCTTGGACTTCCATGATTATAGCCCTGGCCCAACATGGTCTCGGGGAAGAAGCCATTGAACTTTTTGAGAAGATGCTGTCACTTGGTATTAAGCCTGACCATATAACATATGTTGGCGTGCTTTCTGCCTGTATACATGTGGGACTGGTGGAACAGGGCAGGAGCTACTATAATTTGATGAGGAACGTACACAAAATTGAACCCACCCATAGCCATTATGCATGCATGATTGATCTGCTTGGGCGTGCTGGATTGCTTCAAGAAGCGTTCAATTTTACACAAAGTATGCCAATTGAGCCAGATGTTATAGCTTGGGGTTCACTTTTATCTTCTTGTAAGGTTCATAAAAATGTTGATCTGGCAGAGGTTGCAGCAGAAAGATTGCTGCTTATAGATCCAGACAACAGTGGGGCCTACTCATCCCTTGCTAATTTGTATTCAGCTTGTGGAAGATGGGCAGATGCTGCACAAGTTAGAAAGTCAATGAAGGATAGGAGAGTGAAGAAAGAACAAGGATTTAGTTGGATTCAGATTCAAAACAAAGTCCATGTGTTTGGGGTTGAAGATGGAGGTCATGCACAGAGAGATGCAATCTACAAGATGATGGAAAAGATATGGAAAGAGATCAAAAATATTGGCTTTATTCCTGACACTGAATCAGTATTGCATGACGTTAGCGAAGAAGCAAAGGAGAAGATGCTTAAATATCACAGTGAGAAACTTGCCATTGCTTTTGGGCTAATAAATACTCCAGAGAACACTACACTGAGGATCATGAAGAACCTCAGAGTTTGTAATGACTGTCATTCTGCCATCAAATTTATATCCAAGCTCGTGGGCAGAGAAATCATTGTGAGAGATGCTACTCGTTTTCACCATTTTAAGAATGGGCGGTGTTCTTGTCGGGACTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

786

Amino Acids

87.43

Weight (kDa)

8.46

Isoelectric Point (pI)

32.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008593)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22070
fragaria_vesca	FvH4_6g24010 FvH4_6g24010
malus_domestica	MD01G1046800.v1.1 MD16G1282200.v1.1
prunus_persica	Prupe.3G166700_v2.0.a1
pyrus_communis	pycom01g07270
rosa_chinensis	RchiOBHm_Chr2g0115941
rosa_laevigata	RLG00000018225
rosa_multiflora	Rmu_co8514103.1_g000001 Rmu_sc0025044.1_g000002 Rmu_ssc0000197.1_g000005
rosa_roxburghii	Rroxscaffold_2G00127720 Rroxscaffold_2G00128490
rosa_rugosa	Rorug02G0201400 Rorug02G0201500 Rorug02G0201600 Rorug02G0201700
rosa_samantha	Rh2AG258200 Rh2BG269300 Rh2CG264900 Rh2DG266600
rosa_wichuraiana	Rw2G020250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	914
AatII	GACGTC	1 cut(s)	726
AccI	GTMKAC	1 cut(s)	1573
AccII	CGCG	2 cut(s)	324, 720
AciI	CCGC	3 cut(s)	17, 459, 2332
AclWI	GGATC	3 cut(s)	578, 1829, 2219
AcsI	RAATTY	4 cut(s)	281, 736, 1299, 2258
AcuI	CTGAAG	2 cut(s)	1008, 1183
AcyI	GRCGYC	1 cut(s)	723
AdeI	CACNNNGTG	1 cut(s)	208
AfaI	GTAC	2 cut(s)	173, 1629
AfiI	CCNNNNNNNGG	1 cut(s)	1129
AflIII	ACRYGT	4 cut(s)	168, 564, 1239, 1576
AjiI	CACGTC	1 cut(s)	1129
AjnI	CCWGG	2 cut(s)	242, 1464
Alw21I	GWGCWC	1 cut(s)	1197
Alw26I	GTCTC	4 cut(s)	75, 886, 1113, 1484
AlwI	GGATC	3 cut(s)	578, 1829, 2219
AlwNI	CAGNNNCTG	2 cut(s)	1343, 1904
Ama87I	CYCGRG	1 cut(s)	1481
AoxI	GGCC	3 cut(s)	1219, 1467, 1851
ApeKI	GCWGC	6 cut(s)	290, 467, 1247, 1811, 1825, 1904
ApoI	RAATTY	4 cut(s)	281, 736, 1299, 2258
AspS9I	GGNCC	3 cut(s)	1220, 1468, 1851
AsuC2I	CCSGG	2 cut(s)	94, 127
AsuHPI	GGTGA	6 cut(s)	47, 194, 439, 593, 1412, 2306
AvaI	CYCGRG	1 cut(s)	1481
BanII	GRGCYC	1 cut(s)	1197
BauI	CACGAG	1 cut(s)	2273
BbsI	GAAGAC	1 cut(s)	548
Bbv12I	GWGCWC	1 cut(s)	1197
BbvI	GCAGC	6 cut(s)	302, 454, 1259, 1812, 1823, 1891
BccI	CCATC	7 cut(s)	361, 410, 1055, 1887, 2000, 2038, 2261
BcgI	CGANNNNNNTGC	2 cut(s)	656, 690
BciT130I	CCWGG	2 cut(s)	244, 1466
BciVI	GTATCC	2 cut(s)	746, 1058
BcnI	CCSGG	2 cut(s)	94, 127
BcoDI	GTCTC	4 cut(s)	75, 886, 1113, 1484
BfuI	GTATCC	2 cut(s)	746, 1058
BisI	GCNGC	7 cut(s)	17, 291, 468, 1248, 1812, 1826, 1905
BlpI	GCTNAGC	1 cut(s)	921
BlsI	GCNGC	7 cut(s)	18, 292, 469, 1249, 1813, 1827, 1906
Bme1390I	CCNGG	4 cut(s)	94, 127, 244, 1466
BmeT110I	CYCGRG	1 cut(s)	1481
BmgBI	CACGTC	1 cut(s)	1129
BmgT120I	GGNCC	3 cut(s)	1220, 1468, 1851
BmiI	GGNNCC	2 cut(s)	1222, 1852
BmrFI	CCNGG	4 cut(s)	94, 127, 244, 1466
BmrI	ACTGGG	2 cut(s)	192, 427
BmsI	GCATC	9 cut(s)	187, 277, 1174, 1395, 1503, 1891, 2017, 2127, 2290
BmuI	ACTGGG	2 cut(s)	192, 427
BpiI	GAAGAC	1 cut(s)	548
BplI	GAGNNNNNCTC	2 cut(s)	1339, 1371
BpmI	CTGGAG	1 cut(s)	2175
Bpu1102I	GCTNAGC	1 cut(s)	921
BpuEI	CTTGAG	3 cut(s)	781, 791, 893
BpuMI	CCSGG	2 cut(s)	94, 127
BsaAI	YACGTR	1 cut(s)	175
BsaHI	GRCGYC	1 cut(s)	723
BsaI	GGTCTC	2 cut(s)	1113, 1484
BsaJI	CCNNGG	2 cut(s)	587, 1464
BsaWI	WCCGGW	1 cut(s)	1422
BsaXI	ACNNNNNCTCC	2 cut(s)	411, 441
Bsc4I	CCNNNNNNNGG	1 cut(s)	1129
Bse1I	ACTGG	3 cut(s)	187, 433, 1590
Bse3DI	GCAATG	4 cut(s)	674, 1019, 1152, 2166
BseBI	CCWGG	2 cut(s)	244, 1466
BseDI	CCNNGG	2 cut(s)	587, 1464
BseGI	GGATG	5 cut(s)	202, 490, 932, 1066, 1859
BseLI	CCNNNNNNNGG	1 cut(s)	1129
BseMI	GCAATG	4 cut(s)	674, 1019, 1152, 2166
BseMII	CTCAG	4 cut(s)	912, 1350, 2198, 2239
BseNI	ACTGG	3 cut(s)	187, 433, 1590
BseXI	GCAGC	6 cut(s)	302, 454, 1259, 1812, 1823, 1891
BseYI	CCCAGC	1 cut(s)	1090
BsgI	GTGCAG	1 cut(s)	1890
Bsh1236I	CGCG	2 cut(s)	324, 720
BshFI	GGCC	3 cut(s)	1221, 1469, 1853
BsiHKAI	GWGCWC	1 cut(s)	1197
BsiHKCI	CYCGRG	1 cut(s)	1481
BsiSI	CCGG	3 cut(s)	93, 126, 1423
BslFI	GGGAC	1 cut(s)	1596
BslI	CCNNNNNNNGG	1 cut(s)	1129
BsmAI	GTCTC	4 cut(s)	75, 886, 1113, 1484
BsmFI	GGGAC	1 cut(s)	1596
BsmI	GAATGC	2 cut(s)	253, 649
BsnI	GGCC	3 cut(s)	1221, 1469, 1853
Bso31I	GGTCTC	2 cut(s)	1113, 1484
BsoBI	CYCGRG	1 cut(s)	1481
Bsp1286I	GDGCHC	1 cut(s)	1197
Bsp143I	GATC	8 cut(s)	348, 583, 957, 1672, 1795, 1834, 2064, 2211
Bsp1720I	GCTNAGC	1 cut(s)	921
BspACI	CCGC	3 cut(s)	17, 459, 2332
BspANI	GGCC	3 cut(s)	1221, 1469, 1853
BspCNI	CTCAG	4 cut(s)	913, 1349, 2199, 2238
BspFNI	CGCG	2 cut(s)	324, 720
BspHI	TCATGA	1 cut(s)	2214
BspLI	GGNNCC	2 cut(s)	1222, 1852
BspPI	GGATC	3 cut(s)	578, 1829, 2219
BspQI	GCTCTTC	1 cut(s)	1202
BspTNI	GGTCTC	2 cut(s)	1113, 1484
BsrDI	GCAATG	4 cut(s)	674, 1019, 1152, 2166
BsrI	ACTGG	3 cut(s)	187, 433, 1590
BssECI	CCNNGG	2 cut(s)	587, 1464
BssMI	GATC	8 cut(s)	348, 583, 957, 1672, 1795, 1834, 2064, 2211
BssNAI	GTATAC	1 cut(s)	1574
BssNI	GRCGYC	1 cut(s)	723
BssSI	CACGAG	1 cut(s)	2273
BssT1I	CCWWGG	1 cut(s)	587
Bst1107I	GTATAC	1 cut(s)	1574
Bst2BI	CACGAG	1 cut(s)	2273
Bst2UI	CCWGG	2 cut(s)	244, 1466
Bst4CI	ACNGT	8 cut(s)	206, 427, 554, 1124, 1438, 1847, 2153, 2243
Bst6I	CTCTTC	1 cut(s)	1202
BstACI	GRCGYC	1 cut(s)	723
BstAPI	GCANNNNNTGC	3 cut(s)	467, 1808, 1904
BstBAI	YACGTR	1 cut(s)	175
BstC8I	GCNNGC	4 cut(s)	67, 1559, 1663, 1686
BstDEI	CTNAG	6 cut(s)	296, 921, 972, 1336, 2207, 2225
BstEII	GGTNACC	1 cut(s)	427
BstF5I	GGATG	5 cut(s)	202, 490, 932, 1066, 1859
BstFNI	CGCG	2 cut(s)	324, 720
BstKTI	GATC	8 cut(s)	351, 586, 960, 1675, 1798, 1837, 2067, 2214
BstMAI	GTCTC	4 cut(s)	75, 886, 1113, 1484
BstMBI	GATC	8 cut(s)	348, 583, 957, 1672, 1795, 1834, 2064, 2211
BstMWI	GCNNNNNNNGC	8 cut(s)	467, 476, 686, 1049, 1142, 1735, 1808, 1904
BstNI	CCWGG	2 cut(s)	244, 1466
BstNSI	RCATGY	6 cut(s)	69, 172, 465, 568, 1580, 1665
BstPI	GGTNACC	1 cut(s)	427
BstSCI	CCNGG	4 cut(s)	92, 125, 242, 1464
BstUI	CGCG	2 cut(s)	324, 720
BstV1I	GCAGC	6 cut(s)	302, 454, 1259, 1812, 1823, 1891
BstV2I	GAAGAC	1 cut(s)	548
BstX2I	RGATCY	1 cut(s)	1834
BstXI	CCANNNNNNTGG	3 cut(s)	352, 1994, 2275
BstYI	RGATCY	1 cut(s)	1834
BstZ17I	GTATAC	1 cut(s)	1574
BsuI	GTATCC	2 cut(s)	746, 1058
BsuRI	GGCC	3 cut(s)	1221, 1469, 1853
BtrI	CACGTC	1 cut(s)	1129
BtsCI	GGATG	5 cut(s)	202, 490, 932, 1066, 1859
BtsI	GCAGTG	1 cut(s)	948
BtsIMutI	CAGTG	7 cut(s)	782, 948, 1396, 1852, 2091, 2158, 2204
Cac8I	GCNNGC	4 cut(s)	67, 1559, 1663, 1686
CaiI	CAGNNNCTG	2 cut(s)	1343, 1904
CciI	TCATGA	1 cut(s)	2214
Cfr13I	GGNCC	3 cut(s)	1220, 1468, 1851
CseI	GACGC	1 cut(s)	58
Csp6I	GTAC	2 cut(s)	172, 1628
CviQI	GTAC	2 cut(s)	172, 1628
DdeI	CTNAG	6 cut(s)	296, 921, 972, 1336, 2207, 2225
DpnI	GATC	8 cut(s)	350, 585, 959, 1674, 1797, 1836, 2066, 2213
DpnII	GATC	8 cut(s)	348, 583, 957, 1672, 1795, 1834, 2064, 2211
DraIII	CACNNNGTG	1 cut(s)	208
Eam1104I	CTCTTC	1 cut(s)	1202
EarI	CTCTTC	1 cut(s)	1202
Ecl136II	GAGCTC	1 cut(s)	1195
Eco130I	CCWWGG	1 cut(s)	587
Eco24I	GRGCYC	1 cut(s)	1197
Eco31I	GGTCTC	2 cut(s)	1113, 1484
Eco53kI	GAGCTC	1 cut(s)	1195
Eco57I	CTGAAG	2 cut(s)	1008, 1183
Eco88I	CYCGRG	1 cut(s)	1481
Eco91I	GGTNACC	1 cut(s)	427
EcoICRI	GAGCTC	1 cut(s)	1195
EcoO109I	RGGNCCY	2 cut(s)	1220, 1851
EcoO65I	GGTNACC	1 cut(s)	427
EcoRI	GAATTC	1 cut(s)	736
EcoRII	CCWGG	2 cut(s)	242, 1464
EcoT14I	CCWWGG	1 cut(s)	587
EcoT22I	ATGCAT	2 cut(s)	1663, 1667
EcoT38I	GRGCYC	1 cut(s)	1197
ErhI	CCWWGG	1 cut(s)	587
FalI	AAGNNNNNCTT	4 cut(s)	68, 100, 1261, 1293
FaqI	GGGAC	1 cut(s)	1596
FauNDI	CATATG	2 cut(s)	663, 1549
FblI	GTMKAC	1 cut(s)	1573
Fnu4HI	GCNGC	7 cut(s)	17, 291, 468, 1248, 1812, 1826, 1905
FokI	GGATG	5 cut(s)	209, 497, 919, 1073, 1846
FriOI	GRGCYC	1 cut(s)	1197
Fsp4HI	GCNGC	7 cut(s)	17, 291, 468, 1248, 1812, 1826, 1905
GluI	GCNGC	7 cut(s)	17, 291, 468, 1248, 1812, 1826, 1905
GsaI	CCCAGC	1 cut(s)	1094
GsuI	CTGGAG	1 cut(s)	2175
HaeIII	GGCC	3 cut(s)	1221, 1469, 1853
HapII	CCGG	3 cut(s)	93, 126, 1423
HgaI	GACGC	1 cut(s)	58
Hin1I	GRCGYC	1 cut(s)	723
HindIII	AAGCTT	2 cut(s)	477, 1073
HinfI	GANTC	8 cut(s)	41, 253, 326, 812, 1109, 1966, 1972, 2096
HpaII	CCGG	3 cut(s)	93, 126, 1423
HphI	GGTGA	6 cut(s)	47, 194, 439, 593, 1412, 2306
Hpy166II	GTNNAC	7 cut(s)	438, 837, 1295, 1420, 1574, 1630, 1760
Hpy188I	TCNGA	9 cut(s)	40, 74, 140, 366, 393, 415, 1027, 1971, 2228
Hpy188III	TCNNGA	8 cut(s)	439, 889, 1700, 1838, 2087, 2192, 2215, 2345
Hpy8I	GTNNAC	7 cut(s)	438, 837, 1295, 1420, 1574, 1630, 1760
Hpy99I	CGWCG	2 cut(s)	725, 728
HpyAV	CCTTC	3 cut(s)	490, 1211, 1921
HpyCH4III	ACNGT	8 cut(s)	206, 427, 554, 1124, 1438, 1847, 2153, 2243
HpyCH4IV	ACGT	6 cut(s)	174, 723, 1128, 1241, 1626, 2112
HpyF10VI	GCNNNNNNNGC	8 cut(s)	467, 476, 686, 1049, 1142, 1735, 1808, 1904
HpyF3I	CTNAG	6 cut(s)	296, 921, 972, 1336, 2207, 2225
HpySE526I	ACGT	6 cut(s)	174, 723, 1128, 1241, 1626, 2112
Hsp92I	GRCGYC	1 cut(s)	723
Kzo9I	GATC	8 cut(s)	348, 583, 957, 1672, 1795, 1834, 2064, 2211
LguI	GCTCTTC	1 cut(s)	1202
LmnI	GCTCC	2 cut(s)	1192, 1602
Lsp1109I	GCAGC	6 cut(s)	302, 454, 1259, 1812, 1823, 1891
LweI	GCATC	9 cut(s)	187, 277, 1174, 1395, 1503, 1891, 2017, 2127, 2290
MaeII	ACGT	6 cut(s)	174, 723, 1128, 1241, 1626, 2112
MaeIII	GTNAC	6 cut(s)	356, 421, 427, 1018, 1124, 1518
MalI	GATC	8 cut(s)	350, 585, 959, 1674, 1797, 1836, 2066, 2213
MboI	GATC	8 cut(s)	348, 583, 957, 1672, 1795, 1834, 2064, 2211
MfeI	CAATTG	1 cut(s)	1731
MflI	RGATCY	1 cut(s)	1834
MhlI	GDGCHC	1 cut(s)	1197
MlyI	GAGTC	1 cut(s)	320
MmeI	TCCRAC	3 cut(s)	861, 966, 1943
Mph1103I	ATGCAT	2 cut(s)	1663, 1667
MseI	TTAA	8 cut(s)	149, 474, 516, 702, 1256, 1530, 2142, 2322
MslI	CAYNNNNRTG	4 cut(s)	173, 350, 1308, 1788
MspA1I	CMGCKG	1 cut(s)	920
MspI	CCGG	3 cut(s)	93, 126, 1423
MspR9I	CCNGG	4 cut(s)	94, 127, 244, 1466
MunI	CAATTG	1 cut(s)	1731
Mva1269I	GAATGC	2 cut(s)	253, 649
MvaI	CCWGG	2 cut(s)	244, 1466
MvnI	CGCG	2 cut(s)	324, 720
MwoI	GCNNNNNNNGC	8 cut(s)	467, 476, 686, 1049, 1142, 1735, 1808, 1904
NciI	CCSGG	2 cut(s)	94, 127
NdeI	CATATG	2 cut(s)	663, 1549
NdeII	GATC	8 cut(s)	348, 583, 957, 1672, 1795, 1834, 2064, 2211
NlaIV	GGNNCC	2 cut(s)	1222, 1852
NmuCI	GTSAC	4 cut(s)	427, 1018, 1124, 1518
NsiI	ATGCAT	2 cut(s)	1663, 1667
NspI	RCATGY	6 cut(s)	69, 172, 465, 568, 1580, 1665
PaeI	GCATGC	2 cut(s)	69, 1665
PagI	TCATGA	1 cut(s)	2214
PciI	ACATGT	3 cut(s)	168, 564, 1576
PciSI	GCTCTTC	1 cut(s)	1202
PctI	GAATGC	2 cut(s)	253, 649
PfeI	GAWTC	7 cut(s)	41, 253, 812, 1109, 1966, 1972, 2096
PfoI	TCCNGGA	2 cut(s)	92, 242
PkrI	GCNGC	7 cut(s)	18, 292, 469, 1249, 1813, 1827, 1906
PleI	GAGTC	1 cut(s)	320
PpsI	GAGTC	1 cut(s)	320
Ppu21I	YACGTR	1 cut(s)	175
PscI	ACATGT	3 cut(s)	168, 564, 1576
PsiI	TTATAA	1 cut(s)	914
Psp124BI	GAGCTC	1 cut(s)	1197
Psp6I	CCWGG	2 cut(s)	242, 1464
PspEI	GGTNACC	1 cut(s)	427
PspFI	CCCAGC	1 cut(s)	1090
PspGI	CCWGG	2 cut(s)	242, 1464
PspN4I	GGNNCC	2 cut(s)	1222, 1852
PspPI	GGNCC	3 cut(s)	1220, 1468, 1851
PstNI	CAGNNNCTG	2 cut(s)	1343, 1904
PsuI	RGATCY	1 cut(s)	1834
PvuII	CAGCTG	1 cut(s)	920
RsaI	GTAC	2 cut(s)	173, 1629
RsaNI	GTAC	2 cut(s)	172, 1628
RseI	CAYNNNNRTG	4 cut(s)	173, 350, 1308, 1788
SacI	GAGCTC	1 cut(s)	1197
SapI	GCTCTTC	1 cut(s)	1202
SaqAI	TTAA	8 cut(s)	149, 474, 516, 702, 1256, 1530, 2142, 2322
SatI	GCNGC	7 cut(s)	17, 291, 468, 1248, 1812, 1826, 1905
Sau3AI	GATC	8 cut(s)	348, 583, 957, 1672, 1795, 1834, 2064, 2211
Sau96I	GGNCC	3 cut(s)	1220, 1468, 1851
SchI	GAGTC	1 cut(s)	320
ScrFI	CCNGG	4 cut(s)	94, 127, 244, 1466
SduI	GDGCHC	1 cut(s)	1197
SfaNI	GCATC	9 cut(s)	187, 277, 1174, 1395, 1503, 1891, 2017, 2127, 2290
SmiMI	CAYNNNNRTG	4 cut(s)	173, 350, 1308, 1788
SmlI	CTYRAG	3 cut(s)	796, 806, 872
SmoI	CTYRAG	3 cut(s)	796, 806, 872
SphI	GCATGC	2 cut(s)	69, 1665
SsiI	CCGC	3 cut(s)	17, 459, 2332
SspI	AATATT	3 cut(s)	451, 1407, 2074
SstI	GAGCTC	1 cut(s)	1197
StyD4I	CCNGG	4 cut(s)	92, 125, 242, 1464
StyI	CCWWGG	1 cut(s)	587
TaaI	ACNGT	8 cut(s)	206, 427, 554, 1124, 1438, 1847, 2153, 2243
TaiI	ACGT	6 cut(s)	177, 726, 1131, 1244, 1629, 2115
TaqI	TCGA	1 cut(s)	635
TauI	GCSGC	1 cut(s)	19
TfiI	GAWTC	7 cut(s)	41, 253, 812, 1109, 1966, 1972, 2096
Tru1I	TTAA	8 cut(s)	149, 474, 516, 702, 1256, 1530, 2142, 2322
Tru9I	TTAA	8 cut(s)	149, 474, 516, 702, 1256, 1530, 2142, 2322
TscAI	CASTG	7 cut(s)	789, 948, 1396, 1852, 2098, 2158, 2211
TseFI	GTSAC	4 cut(s)	427, 1018, 1124, 1518
TseI	GCWGC	6 cut(s)	290, 467, 1247, 1811, 1825, 1904
Tsp45I	GTSAC	4 cut(s)	427, 1018, 1124, 1518
TspRI	CASTG	7 cut(s)	789, 948, 1396, 1852, 2098, 2158, 2211
XapI	RAATTY	4 cut(s)	281, 736, 1299, 2258
XceI	RCATGY	6 cut(s)	69, 172, 465, 568, 1580, 1665
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2324
XmiI	GTMKAC	1 cut(s)	1573
ZraI	GACGTC	1 cut(s)	724
Zsp2I	ATGCAT	2 cut(s)	1663, 1667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.