Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0008593

Physical Location & Seq

Genomic Coordinates Forward (+)

18854694 .. 18861433

Gene Structure 6740 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0201600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGCTGAGAACCATTTCTATCTCCCGGACTCCTCTGAGGTCCCTCTTCCAAAATCGAGCTCCTCATTGTTCAATCCCAAACCAAACCCCATCACCACCATGTAACTCTTCCAGTTTGATCTCCTATTCTCTTTACTCGACGTCATCAAAGCAAGAGAAGGAGGACAGAAATGAGGTCGTTTCGCTTTTCAACAGAGATCCAGCTGCCCCTCCGAGGCTCTTTGTGGTCCAGCCCCGGCTTCGTCCCGATTCTATCTTGCACGTTAAGCTCAACGAAGCTCTCAGCCTTGCTAACTCTCTTGAAGAACAGCGAAATGGATGCTTCAAAAACAATTTGTGTGATAAGGAAACACCACCGCACGTTGTTGTTCAAAACCCAATAGTGAGGCACCAAACTCGTGCAGATACATATTTTGGAAAAGGAACTTTGGAAGCTGATCAAGTGGATGCTGTTTTTGTGAATACAACTCTGTCTGGAATTCAGCAGAGGAACTTGGAGAGAGTGTTGGGCAAACCAGTCTTGGACCGTGTGGGTCTTATAATAGAGATTTTCAATGCTCATGCCTGCACAAAGGAGGGAAAGCTTCAGGCCGAGTTAGCAGCACTAATGTATAAGAAAACAAGACTTATACGAATGCGTGGTCCAGGTGGACGCTTAGGTTTTGGAATGGGTGGAGAAGCTGAAGTTGTTAGTGCCCGAGGGAGAGGAAATGCTGGAGCTGGATTCATTAGTGGGGCAGGAGAAACTGAACTTCAACTTCAACGACGAAGAATTTTAGAAAGGAGGAGTAGTCTGCTGCAACAAATTAAGGATGTTCGTCGTACACGAGCTGTGCAACGTGCTTCTCGCAAGAGGCATGGAAGCTCTGGTCAAGGCTTAGCTACTGTTGCTGTTGTGGGGTATACAAATGCTGGGAAATCTACATTGGTGAGTGCCCTCTCACATAGTGATCTCTACAGTGATTCTCGATTGTTTGCAACAGTTGACCCTAGATTGAGAAGTGTACTTCTTCCTTCAGGGGGGAAAGTGCTTGTTAGCGATACAGTAGGATTTATTTCAGATTTGCCAGTGCAGTTAGTGGAAGCATTTCATGCGACTTTAGAAGAAGTTGTGGAGGCTGATCTGCTTGTGCATGTGTTGGATTGCACTGCTCCTAATCTTGAGGAGCACCGATCAACTGTGTTACATGTTCTTGAGCAAATCGGTGTATCCAAGGAGAAGCTTGAGAATATGATAGAAGTTTGGAATAAGATTGACAATGAGGGAGAGGATAGGGGAATGGATGTTAATGAATCTCTTGATGATGGTGAAGATGGTGAGGTGAGCGGCCTCTCAGAAGAAGATGATGTGGAGTCTGAGCTGTCACCAGGAGCAGCAAACTGTAAGGCTGATGATCCTTTGTCTGAGCTGTCAGCAGAGAATCCCGAAGCGATGGATGACCAAGAACTCGATTCAGAAGATAACCAAGATCATTGGGGTGAAGAAGGTGGTTTCAGCATGGGCTCTAAGACTCTGAATGACCAACAAAGTGAGTACCCTAAGGACTGGGCAGCGGAAAAACAATTGCAATCACAAGCTCCATCTGGTCCACATGTTAGAACTTCTGCCATAACGGGAGTCGGCTTGCAAGAGTTGTTAGAGCTCATTGATGAGAAACTGAAGGTCCCAAATGTTGTGGAAAAGGGTGTATTTGATCGAAAATGGAGGCCCCCTCGTACAGAGGAGGCGGGTCTAGCAGTTGAACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

582

Amino Acids

63.94

Weight (kDa)

5.26

Isoelectric Point (pI)

44.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP-bdg_N	PF13167	128 - 184	9.1e-10	GTP-binding GTPase N-terminal
GTP-bdg_M	PF16360	187 - 283	7.3e-14	GTP-binding GTPase Middle Region
MMR_HSR1	PF01926	295 - 417	2.8e-15	50S ribosome-binding GTPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008593)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22070
fragaria_vesca	FvH4_6g24010 FvH4_6g24010
malus_domestica	MD01G1046800.v1.1 MD16G1282200.v1.1
prunus_persica	Prupe.3G166700_v2.0.a1
pyrus_communis	pycom01g07270
rosa_chinensis	RchiOBHm_Chr2g0115941
rosa_laevigata	RLG00000018225
rosa_multiflora	Rmu_co8514103.1_g000001 Rmu_sc0025044.1_g000002 Rmu_ssc0000197.1_g000005
rosa_roxburghii	Rroxscaffold_2G00127720 Rroxscaffold_2G00128490
rosa_rugosa	Rorug02G0201400 Rorug02G0201500 Rorug02G0201600 Rorug02G0201700
rosa_samantha	Rh2AG258200 Rh2BG269300 Rh2CG264900 Rh2DG266600
rosa_wichuraiana	Rw2G020250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	539
AatII	GACGTC	1 cut(s)	143
AccB1I	GGYRCC	1 cut(s)	387
AccBSI	CCGCTC	1 cut(s)	1326
AccI	GTMKAC	1 cut(s)	902
AciI	CCGC	4 cut(s)	356, 1326, 1553, 1727
AclWI	GGATC	2 cut(s)	191, 1388
AcsI	RAATTY	2 cut(s)	477, 771
AcuI	CTGAAG	4 cut(s)	569, 702, 999, 1679
AcyI	GRCGYC	1 cut(s)	140
AdeI	CACNNNGTG	1 cut(s)	947
AfaI	GTAC	4 cut(s)	823, 1005, 1535, 1717
AfiI	CCNNNNNNNGG	2 cut(s)	213, 1019
AflIII	ACRYGT	2 cut(s)	1186, 1591
AgsI	TTSAA	9 cut(s)	72, 190, 302, 325, 371, 553, 755, 761, 1742
AjnI	CCWGG	2 cut(s)	643, 1366
AjuI	GAANNNNNNNTTGG	2 cut(s)	908, 940
Alw21I	GWGCWC	3 cut(s)	61, 1170, 1644
AlwI	GGATC	2 cut(s)	191, 1388
Ama87I	CYCGRG	1 cut(s)	696
AoxI	GGCC	3 cut(s)	588, 1327, 1706
ApeKI	GCWGC	5 cut(s)	203, 599, 796, 1373, 1550
ApoI	RAATTY	2 cut(s)	477, 771
ArsI	GACNNNNNNTTYG	2 cut(s)	625, 657
Asp700I	GAANNNNTTC	2 cut(s)	13, 1086
AspS9I	GGNCC	7 cut(s)	39, 226, 523, 641, 1586, 1663, 1707
AsuC2I	CCSGG	2 cut(s)	25, 235
AsuHPI	GGTGA	7 cut(s)	84, 940, 1319, 1328, 1333, 1356, 1490
AvaI	CYCGRG	1 cut(s)	696
AvaII	GGWCC	6 cut(s)	39, 226, 523, 641, 1586, 1663
AxyI	CCTNAGG	1 cut(s)	1539
BaeGI	GKGCMC	2 cut(s)	697, 937
BanI	GGYRCC	1 cut(s)	387
BanII	GRGCYC	3 cut(s)	61, 1505, 1644
BauI	CACGAG	2 cut(s)	396, 825
Bbv12I	GWGCWC	3 cut(s)	61, 1170, 1644
BbvI	GCAGC	5 cut(s)	190, 611, 783, 1385, 1562
BccI	CCATC	5 cut(s)	97, 1298, 1307, 1426, 1588
BcgI	CGANNNNNNTGC	4 cut(s)	300, 334, 377, 411
BciT130I	CCWGG	2 cut(s)	645, 1368
BciVI	GTATCC	1 cut(s)	1219
BclI	TGATCA	1 cut(s)	436
BcnI	CCSGG	2 cut(s)	25, 235
BfaI	CTAG	2 cut(s)	990, 1733
BfmI	CTRYAG	1 cut(s)	955
BfuI	GTATCC	1 cut(s)	1219
BisI	GCNGC	6 cut(s)	204, 600, 797, 1327, 1374, 1551
BlpI	GCTNAGC	1 cut(s)	877
BlsI	GCNGC	6 cut(s)	205, 601, 798, 1328, 1375, 1552
Bme1390I	CCNGG	4 cut(s)	25, 235, 645, 1368
Bme18I	GGWCC	6 cut(s)	39, 226, 523, 641, 1586, 1663
BmeT110I	CYCGRG	1 cut(s)	696
BmgT120I	GGNCC	7 cut(s)	39, 226, 523, 641, 1586, 1663, 1707
BmiI	GGNNCC	4 cut(s)	41, 389, 1665, 1709
BmrFI	CCNGG	4 cut(s)	25, 235, 645, 1368
BmrI	ACTGGG	1 cut(s)	1555
BmsI	GCATC	2 cut(s)	308, 436
BmuI	ACTGGG	1 cut(s)	1555
BplI	GAGNNNNNCTC	2 cut(s)	1696, 1728
BpmI	CTGGAG	1 cut(s)	735
Bpu10I	CCTNAGC	1 cut(s)	655
Bpu1102I	GCTNAGC	1 cut(s)	877
BpuEI	CTTGAG	3 cut(s)	1181, 1214, 1244
BpuMI	CCSGG	2 cut(s)	25, 235
BsaHI	GRCGYC	1 cut(s)	140
BsaJI	CCNNGG	4 cut(s)	212, 233, 697, 1212
BsaXI	ACNNNNNCTCC	4 cut(s)	488, 518, 775, 805
Bsc4I	CCNNNNNNNGG	2 cut(s)	213, 1019
Bse1I	ACTGG	4 cut(s)	111, 515, 1067, 1550
Bse21I	CCTNAGG	1 cut(s)	1539
BseBI	CCWGG	2 cut(s)	645, 1368
BseDI	CCNNGG	4 cut(s)	212, 233, 697, 1212
BseGI	GGATG	5 cut(s)	323, 451, 817, 1288, 1441
BseLI	CCNNNNNNNGG	2 cut(s)	213, 1019
BseMII	CTCAG	5 cut(s)	26, 295, 1347, 1347, 1395
BseNI	ACTGG	4 cut(s)	111, 515, 1067, 1550
BseRI	GAGGAG	5 cut(s)	21, 51, 799, 1178, 1736
BseSI	GKGCMC	2 cut(s)	697, 937
BseXI	GCAGC	5 cut(s)	190, 611, 783, 1385, 1562
BseYI	CCCAGC	1 cut(s)	911
BsgI	GTGCAG	3 cut(s)	420, 550, 1091
BshFI	GGCC	3 cut(s)	590, 1329, 1708
BshNI	GGYRCC	1 cut(s)	387
BsiHKAI	GWGCWC	3 cut(s)	61, 1170, 1644
BsiHKCI	CYCGRG	1 cut(s)	696
BsiSI	CCGG	2 cut(s)	25, 235
BslFI	GGGAC	3 cut(s)	25, 228, 1649
BslI	CCNNNNNNNGG	2 cut(s)	213, 1019
BsmFI	GGGAC	3 cut(s)	25, 228, 1649
BsmI	GAATGC	1 cut(s)	639
BsnI	GGCC	3 cut(s)	590, 1329, 1708
BsoBI	CYCGRG	1 cut(s)	696
Bsp1286I	GDGCHC	6 cut(s)	61, 697, 937, 1170, 1505, 1644
Bsp143I	GATC	9 cut(s)	117, 196, 436, 949, 1120, 1172, 1393, 1468, 1693
Bsp1720I	GCTNAGC	1 cut(s)	877
BspACI	CCGC	4 cut(s)	356, 1326, 1553, 1727
BspANI	GGCC	3 cut(s)	590, 1329, 1708
BspCNI	CTCAG	5 cut(s)	27, 294, 1346, 1348, 1396
BspLI	GGNNCC	4 cut(s)	41, 389, 1665, 1709
BspPI	GGATC	2 cut(s)	191, 1388
BspT107I	GGYRCC	1 cut(s)	387
BsrBI	CCGCTC	1 cut(s)	1326
BsrI	ACTGG	4 cut(s)	111, 515, 1067, 1550
BssECI	CCNNGG	4 cut(s)	212, 233, 697, 1212
BssMI	GATC	9 cut(s)	117, 196, 436, 949, 1120, 1172, 1393, 1468, 1693
BssNAI	GTATAC	1 cut(s)	903
BssNI	GRCGYC	1 cut(s)	140
BssSI	CACGAG	2 cut(s)	396, 825
BssT1I	CCWWGG	1 cut(s)	1212
Bst1107I	GTATAC	1 cut(s)	903
Bst2BI	CACGAG	2 cut(s)	396, 825
Bst2UI	CCWGG	2 cut(s)	645, 1368
Bst4CI	ACNGT	7 cut(s)	527, 886, 959, 982, 1045, 1180, 1382
Bst6I	CTCTTC	2 cut(s)	50, 112
BstACI	GRCGYC	1 cut(s)	140
BstAPI	GCANNNNNTGC	1 cut(s)	1091
BstC8I	GCNNGC	2 cut(s)	565, 1625
BstF5I	GGATG	5 cut(s)	323, 451, 817, 1288, 1441
BstKTI	GATC	9 cut(s)	120, 199, 439, 952, 1123, 1175, 1396, 1471, 1696
BstMBI	GATC	9 cut(s)	117, 196, 436, 949, 1120, 1172, 1393, 1468, 1693
BstMWI	GCNNNNNNNGC	5 cut(s)	265, 596, 887, 1091, 1733
BstNI	CCWGG	2 cut(s)	645, 1368
BstNSI	RCATGY	3 cut(s)	1136, 1190, 1595
BstSCI	CCNGG	4 cut(s)	23, 233, 643, 1366
BstSFI	CTRYAG	1 cut(s)	955
BstSLI	GKGCMC	2 cut(s)	697, 937
BstV1I	GCAGC	5 cut(s)	190, 611, 783, 1385, 1562
BstX2I	RGATCY	1 cut(s)	196
BstYI	RGATCY	1 cut(s)	196
BstZ17I	GTATAC	1 cut(s)	903
Bsu36I	CCTNAGG	1 cut(s)	1539
BsuI	GTATCC	1 cut(s)	1219
BsuRI	GGCC	3 cut(s)	590, 1329, 1708
BtgZI	GCGATG	1 cut(s)	1445
BtsCI	GGATG	5 cut(s)	323, 451, 817, 1288, 1441
BtsI	GCAGTG	1 cut(s)	1146
BtsIMutI	CAGTG	3 cut(s)	964, 1074, 1146
Cac8I	GCNNGC	2 cut(s)	565, 1625
Cfr13I	GGNCC	7 cut(s)	39, 226, 523, 641, 1586, 1663, 1707
CseI	GACGC	1 cut(s)	660
Csp6I	GTAC	4 cut(s)	822, 1004, 1534, 1716
CspCI	CAANNNNNGTGG	2 cut(s)	1656, 1691
CviAII	CATG	8 cut(s)	99, 560, 857, 1091, 1133, 1187, 1498, 1592
CviQI	GTAC	4 cut(s)	822, 1004, 1534, 1716
DpnI	GATC	9 cut(s)	119, 198, 438, 951, 1122, 1174, 1395, 1470, 1695
DpnII	GATC	9 cut(s)	117, 196, 436, 949, 1120, 1172, 1393, 1468, 1693
DraIII	CACNNNGTG	1 cut(s)	947
Eam1104I	CTCTTC	2 cut(s)	50, 112
EarI	CTCTTC	2 cut(s)	50, 112
Ecl136II	GAGCTC	2 cut(s)	59, 1642
Eco130I	CCWWGG	1 cut(s)	1212
Eco24I	GRGCYC	3 cut(s)	61, 1505, 1644
Eco47I	GGWCC	6 cut(s)	39, 226, 523, 641, 1586, 1663
Eco53kI	GAGCTC	2 cut(s)	59, 1642
Eco57I	CTGAAG	4 cut(s)	569, 702, 999, 1679
Eco81I	CCTNAGG	1 cut(s)	1539
Eco88I	CYCGRG	1 cut(s)	696
EcoICRI	GAGCTC	2 cut(s)	59, 1642
EcoO109I	RGGNCCY	3 cut(s)	39, 1663, 1707
EcoRI	GAATTC	1 cut(s)	477
EcoRII	CCWGG	2 cut(s)	643, 1366
EcoT14I	CCWWGG	1 cut(s)	1212
EcoT38I	GRGCYC	3 cut(s)	61, 1505, 1644
ErhI	CCWWGG	1 cut(s)	1212
FaeI	CATG	8 cut(s)	102, 563, 860, 1094, 1136, 1190, 1501, 1595
FaqI	GGGAC	3 cut(s)	25, 228, 1649
FatI	CATG	8 cut(s)	98, 559, 856, 1090, 1132, 1186, 1497, 1591
FauI	CCCGC	1 cut(s)	1720
FbaI	TGATCA	1 cut(s)	436
FblI	GTMKAC	1 cut(s)	902
Fnu4HI	GCNGC	6 cut(s)	204, 600, 797, 1327, 1374, 1551
FokI	GGATG	5 cut(s)	330, 458, 824, 1295, 1448
FriOI	GRGCYC	3 cut(s)	61, 1505, 1644
Fsp4HI	GCNGC	6 cut(s)	204, 600, 797, 1327, 1374, 1551
FspBI	CTAG	2 cut(s)	990, 1733
GluI	GCNGC	6 cut(s)	204, 600, 797, 1327, 1374, 1551
GsaI	CCCAGC	1 cut(s)	915
GsuI	CTGGAG	1 cut(s)	735
HaeIII	GGCC	3 cut(s)	590, 1329, 1708
HapII	CCGG	2 cut(s)	25, 235
HgaI	GACGC	1 cut(s)	660
Hin1I	GRCGYC	1 cut(s)	140
Hin1II	CATG	8 cut(s)	102, 563, 860, 1094, 1136, 1190, 1501, 1595
HincII	GTYRAC	1 cut(s)	985
HindII	GTYRAC	1 cut(s)	985
HindIII	AAGCTT	2 cut(s)	581, 1220
HpaII	CCGG	2 cut(s)	25, 235
HphI	GGTGA	7 cut(s)	84, 940, 1319, 1328, 1333, 1356, 1490
Hpy166II	GTNNAC	6 cut(s)	650, 824, 903, 985, 1004, 1589
Hpy188I	TCNGA	8 cut(s)	36, 213, 1060, 1336, 1357, 1405, 1456, 1515
Hpy188III	TCNNGA	8 cut(s)	245, 299, 474, 966, 1160, 1193, 1298, 1424
Hpy8I	GTNNAC	6 cut(s)	650, 824, 903, 985, 1004, 1589
Hpy99I	CGWCG	3 cut(s)	142, 768, 822
HpyAV	CCTTC	4 cut(s)	151, 1023, 1478, 1654
HpyCH4III	ACNGT	7 cut(s)	527, 886, 959, 982, 1045, 1180, 1382
HpyCH4IV	ACGT	4 cut(s)	140, 261, 360, 838
HpyF10VI	GCNNNNNNNGC	5 cut(s)	265, 596, 887, 1091, 1733
HpySE526I	ACGT	4 cut(s)	140, 261, 360, 838
Hsp92I	GRCGYC	1 cut(s)	140
Hsp92II	CATG	8 cut(s)	102, 563, 860, 1094, 1136, 1190, 1501, 1595
Ksp22I	TGATCA	1 cut(s)	436
Kzo9I	GATC	9 cut(s)	117, 196, 436, 949, 1120, 1172, 1393, 1468, 1693
LmnI	GCTCC	6 cut(s)	64, 716, 1156, 1165, 1370, 1582
Lsp1109I	GCAGC	5 cut(s)	190, 611, 783, 1385, 1562
LweI	GCATC	2 cut(s)	308, 436
MaeI	CTAG	2 cut(s)	990, 1733
MaeII	ACGT	4 cut(s)	140, 261, 360, 838
MaeIII	GTNAC	3 cut(s)	101, 1182, 1362
MalI	GATC	9 cut(s)	119, 198, 438, 951, 1122, 1174, 1395, 1470, 1695
MbiI	CCGCTC	1 cut(s)	1326
MboI	GATC	9 cut(s)	117, 196, 436, 949, 1120, 1172, 1393, 1468, 1693
MfeI	CAATTG	1 cut(s)	1562
MflI	RGATCY	1 cut(s)	196
MhlI	GDGCHC	6 cut(s)	61, 697, 937, 1170, 1505, 1644
MluCI	AATT	5 cut(s)	331, 477, 771, 804, 1562
MlyI	GAGTC	4 cut(s)	22, 1361, 1504, 1626
MmeI	TCCRAC	1 cut(s)	1119
MroXI	GAANNNNTTC	2 cut(s)	13, 1086
MseI	TTAA	3 cut(s)	264, 807, 1287
MslI	CAYNNNNRTG	2 cut(s)	97, 1476
MspA1I	CMGCKG	2 cut(s)	203, 1553
MspI	CCGG	2 cut(s)	25, 235
MspR9I	CCNGG	4 cut(s)	25, 235, 645, 1368
MunI	CAATTG	1 cut(s)	1562
Mva1269I	GAATGC	1 cut(s)	639
MvaI	CCWGG	2 cut(s)	645, 1368
MwoI	GCNNNNNNNGC	5 cut(s)	265, 596, 887, 1091, 1733
NciI	CCSGG	2 cut(s)	25, 235
NdeII	GATC	9 cut(s)	117, 196, 436, 949, 1120, 1172, 1393, 1468, 1693
NlaIII	CATG	8 cut(s)	102, 563, 860, 1094, 1136, 1190, 1501, 1595
NlaIV	GGNNCC	4 cut(s)	41, 389, 1665, 1709
NmeAIII	GCCGAG	1 cut(s)	616
NmuCI	GTSAC	1 cut(s)	1362
NspI	RCATGY	3 cut(s)	1136, 1190, 1595
PciI	ACATGT	2 cut(s)	1186, 1591
PcsI	WCGNNNNNNNCGW	1 cut(s)	823
PctI	GAATGC	1 cut(s)	639
PdmI	GAANNNNTTC	2 cut(s)	13, 1086
PfeI	GAWTC	6 cut(s)	248, 723, 962, 1292, 1420, 1451
PfoI	TCCNGGA	1 cut(s)	23
PkrI	GCNGC	6 cut(s)	205, 601, 798, 1328, 1375, 1552
PleI	GAGTC	4 cut(s)	22, 1360, 1504, 1625
PpsI	GAGTC	4 cut(s)	22, 1360, 1504, 1625
PpuMI	RGGWCCY	2 cut(s)	39, 1663
PscI	ACATGT	2 cut(s)	1186, 1591
PsiI	TTATAA	1 cut(s)	539
Psp124BI	GAGCTC	2 cut(s)	61, 1644
Psp5II	RGGWCCY	2 cut(s)	39, 1663
Psp6I	CCWGG	2 cut(s)	643, 1366
PspFI	CCCAGC	1 cut(s)	911
PspGI	CCWGG	2 cut(s)	643, 1366
PspN4I	GGNNCC	4 cut(s)	41, 389, 1665, 1709
PspPI	GGNCC	7 cut(s)	39, 226, 523, 641, 1586, 1663, 1707
PspPPI	RGGWCCY	2 cut(s)	39, 1663
PsuI	RGATCY	1 cut(s)	196
PvuII	CAGCTG	1 cut(s)	203
RsaI	GTAC	4 cut(s)	823, 1005, 1535, 1717
RsaNI	GTAC	4 cut(s)	822, 1004, 1534, 1716
RseI	CAYNNNNRTG	2 cut(s)	97, 1476
SacI	GAGCTC	2 cut(s)	61, 1644
SaqAI	TTAA	3 cut(s)	264, 807, 1287
SatI	GCNGC	6 cut(s)	204, 600, 797, 1327, 1374, 1551
Sau3AI	GATC	9 cut(s)	117, 196, 436, 949, 1120, 1172, 1393, 1468, 1693
Sau96I	GGNCC	7 cut(s)	39, 226, 523, 641, 1586, 1663, 1707
SchI	GAGTC	4 cut(s)	22, 1361, 1504, 1626
ScrFI	CCNGG	4 cut(s)	25, 235, 645, 1368
SduI	GDGCHC	6 cut(s)	61, 697, 937, 1170, 1505, 1644
SfaNI	GCATC	2 cut(s)	308, 436
SfcI	CTRYAG	1 cut(s)	955
SinI	GGWCC	6 cut(s)	39, 226, 523, 641, 1586, 1663
SmiMI	CAYNNNNRTG	2 cut(s)	97, 1476
SmlI	CTYRAG	3 cut(s)	1160, 1193, 1223
SmoI	CTYRAG	3 cut(s)	1160, 1193, 1223
Sse9I	AATT	5 cut(s)	331, 477, 771, 804, 1562
SsiI	CCGC	4 cut(s)	356, 1326, 1553, 1727
SspMI	CTAG	2 cut(s)	990, 1733
SstI	GAGCTC	2 cut(s)	61, 1644
StyD4I	CCNGG	4 cut(s)	23, 233, 643, 1366
StyI	CCWWGG	1 cut(s)	1212
TaaI	ACNGT	7 cut(s)	527, 886, 959, 982, 1045, 1180, 1382
TaiI	ACGT	4 cut(s)	143, 264, 363, 841
TaqI	TCGA	5 cut(s)	55, 137, 967, 1449, 1696
TasI	AATT	5 cut(s)	331, 477, 771, 804, 1562
TatI	WGTACW	1 cut(s)	1003
TauI	GCSGC	1 cut(s)	1329
TfiI	GAWTC	6 cut(s)	248, 723, 962, 1292, 1420, 1451
Tru1I	TTAA	3 cut(s)	264, 807, 1287
Tru9I	TTAA	3 cut(s)	264, 807, 1287
TscAI	CASTG	3 cut(s)	964, 1074, 1153
TseFI	GTSAC	1 cut(s)	1362
TseI	GCWGC	5 cut(s)	203, 599, 796, 1373, 1550
Tsp45I	GTSAC	1 cut(s)	1362
TspDTI	ATGAA	3 cut(s)	715, 1079, 1305
TspRI	CASTG	3 cut(s)	964, 1074, 1153
VpaK11BI	GGWCC	6 cut(s)	39, 226, 523, 641, 1586, 1663
XapI	RAATTY	2 cut(s)	477, 771
XceI	RCATGY	3 cut(s)	1136, 1190, 1595
XmiI	GTMKAC	1 cut(s)	902
XmnI	GAANNNNTTC	2 cut(s)	13, 1086
XspI	CTAG	2 cut(s)	990, 1733
ZraI	GACGTC	1 cut(s)	141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.