Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0008593

Physical Location & Seq

Genomic Coordinates Forward (+)

14818315 .. 14823138

Gene Structure 4824 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1046800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGAAATGGCTAGAACAACAGCCAAAATGGTCTCTCACATACGTGGCATTCGGCAGTGCAGCACAACTCGAAGCTGAGCAAATGAAGGAATTGGCTTGGGGTTTGAGGAGGAGCAAATGCAAATTCTTGTGGGTGGTTAGGGAAGTAGAAGCAGCCAAGCTCCCAAAAGGATTTGCAGAGGAGACGTCTGAGAAGGGTTTGGTGGTTACATGGTGCCCACAACTGGAGTGGTGTAGAGTATTTTTTATGGCCGGAGTTCAAATTTCTATCCCTAATATTTTTGAGCCAAATGGTATTCTTAGTAATTCCGATGGAGGCCTCAAATCCGGCCTCCCGTTCGGACTTCTACGCATATCAGCTGCAAGCAAGCCTCAGAAAGCGAGACTTACTTGCCGCCAATCAATCCATGCCCAGATCATCAAATCCGGCCTTCACCTCTGCAGTGTGTTTTTTATGAACAAACTCATGACCGCGTACCTCAAAACCGGCTCTGCTTCCGATGCCCACCGCGTGTTCGACGAAATGCCCCTAAGGAATACACTCTCATGGAACACTATTATCTCCGCTTATGCAAAGCAGGGAAGGTTTGACGAGGCACTGAGCGTTTTCAACGCAATGCCGCAACGGGACTCCGTTTCCTGGACCGCAATGATCGTGGGTTACAATCAGATGGGTCGTTACGGGAATGCCATTCAGATGTTTGTGCAGATGATTGCGGACGGAGTTCTGGTGACCCAGTTCACCCTTACTAACATTCTTTCCGCATGTGGTGCTGTTAAGGCTTTGGAGATTGGTAGGAAGGTTCATTCGTTTGTTGTTGAACTTGCGGTTGGCAGTTATGTTTCTGTTGCCAACTGTCTTTTAAACATGTATGCAAAATCTGGTGATCCCAGGACCGTGAAGATTGTTTTCGATAGGATGAGGTTGAAAAACACATCGAGCTGGAATGCTATGATTTCTTTGCATATGCAATGCGGTTGCGCTGACCTTGCTCTTGCTCAGTTTAAGCAAATGAAGGAGCGCGACATTGATTCTGTTCTACAGCCCGACAAGTTCACCTTAGCAAGCATTCTGTCAGCTTGTGCTAACCTTGAGAAGTTGGAACTTGGGAAGCAAATCCATGCCCATATTGTAAGAGCTGAGCTGGGCACATATGATGCAGTGAAAAATGCTTTGATCACAATGTATGCTAAATCTGGTGGGTTGGCAATTGCTCAAAAGATTTTAGAGCAATGCGTGACTTCCGATCTCAATGTTATAGCTTTTACGGCCCTATTGCATGGGTACATAAAGCTTGGGGATATAATGCCAGCCGGGCAGATATTTGACGCGTTGAGAGACCGTGACGTGGTTGCATGGACAGTAATGATTGTTGGTTATGTACAGAATGGGTTGAATAATGATGCTTTGGAGCTCTTCATGTCAATGATAAAACAAGGCCCCAAGCCGAACAGCTACACCTTAGCAGCTATGTTAAGTGTCAGTTCGAGCTTGGCTTCTTTAGACTATGGAAAACAAATTCATGCAAGTGCCATGAGGTCGGGGGAAGTCCATTCAGTTTCTGTAAGCAATGCTCTAATTTCAATGTATTCTAAAGCTGGAAGCATCAGTGGTGCAAAGAAAGTATTCAATTTGATTTACTCGAATAGAGATACGGTTTCTTGGACTTCCATGATCATAGCCCTGGTTCAACATGGTCATGGGGAAGATGCCATTGAACTGTTTGAGAAGATGCTGTCACATGGTATTAAGCCTGACCATATAACTTATGTCGGCGTGCTCTCTGCCTGTATACATGTGGGATTGGTAGAACAGGGCAGGAGCTACTATAATTTAATGAGGAACGTCCACAAAATCGAACCCACCCATAGCCATTATGCATGCATGATTGATCTGCTTGGGCGCGCTGGATTGCTTCAAGAAGCATTCAATTTTATACAAAGTTTGCCAGTTAAACCAGATGTTATAGCTTGGGGTTCACTTTTATCTTGTTGTAAGGTTCATAAAAATGTAGATCTAGCAAAGGTTGCAGCTGAAAGATTGCTGCTTATTGATCCAGACAAGAGTGGGGCCCACTCAGCCCTTGCTAATCTGTATTCAGCTTGTGGAAGATGGGAAGAAGCTGCACAAGTTAGAAGGTCAATGAAGAATAAGGGAGTGAAGAAAGACAAGGATTTAAAAGAGGCAATCTACAAGATGATGGAAAAGATATGGAAAGAGATTAAAAATATGGGTTTTGTTACTGACACTGACTCAGTATTGCATGATGTTGGTGAAGAAGTGAAGGAGAAGATGCTTAAACATCACAGAGCATTGTGGTTGGAACTCGGCTTGGTAAGCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

782

Amino Acids

86.57

Weight (kDa)

8.96

Isoelectric Point (pI)

33.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	179 - 209	1.9e-07	PPR repeat family
PPR	PF01535	182 - 209	7.9e-08	PPR repeat
PPR_2	PF13041	210 - 256	8.6e-06	PPR repeat family
PPR_2	PF13041	311 - 363	1.5e-06	PPR repeat family
PPR_2	PF13041	448 - 492	3.6e-10	PPR repeat family
PPR_2	PF13041	550 - 598	3.3e-12	PPR repeat family
PPR	PF01535	553 - 583	7e-08	PPR repeat
E_motif	PF20431	668 - 722	4e-12	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008593)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22070
fragaria_vesca	FvH4_6g24010 FvH4_6g24010
malus_domestica	MD01G1046800.v1.1 MD16G1282200.v1.1
prunus_persica	Prupe.3G166700_v2.0.a1
pyrus_communis	pycom01g07270
rosa_chinensis	RchiOBHm_Chr2g0115941
rosa_laevigata	RLG00000018225
rosa_multiflora	Rmu_co8514103.1_g000001 Rmu_sc0025044.1_g000002 Rmu_ssc0000197.1_g000005
rosa_roxburghii	Rroxscaffold_2G00127720 Rroxscaffold_2G00128490
rosa_rugosa	Rorug02G0201400 Rorug02G0201500 Rorug02G0201600 Rorug02G0201700
rosa_samantha	Rh2AG258200 Rh2BG269300 Rh2CG264900 Rh2DG266600
rosa_wichuraiana	Rw2G020250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	188
AccB1I	GGYRCC	1 cut(s)	213
AccI	GTMKAC	1 cut(s)	1792
AccII	CGCG	5 cut(s)	473, 510, 1023, 1331, 1905
AclWI	GGATC	2 cut(s)	881, 2048
AcoI	YGGCCR	1 cut(s)	249
AcsI	RAATTY	3 cut(s)	122, 261, 1518
AcyI	GRCGYC	1 cut(s)	185
AdeI	CACNNNGTG	1 cut(s)	511
AfaI	GTAC	3 cut(s)	476, 1286, 1383
AfiI	CCNNNNNNNGG	3 cut(s)	223, 639, 1348
AflIII	ACRYGT	3 cut(s)	867, 1329, 1795
AjiI	CACGTC	1 cut(s)	1348
AjnI	CCWGG	3 cut(s)	638, 890, 1683
AjuI	GAANNNNNNNTTGG	2 cut(s)	813, 845
AleI	CACNNNNGTG	1 cut(s)	41
Alw21I	GWGCWC	2 cut(s)	1416, 1782
Alw26I	GTCTC	4 cut(s)	36, 176, 376, 1332
AlwI	GGATC	2 cut(s)	881, 2048
AlwNI	CAGNNNCTG	1 cut(s)	1562
AoxI	GGCC	7 cut(s)	249, 316, 328, 427, 1269, 1438, 2070
ApaI	GGGCCC	1 cut(s)	2074
ApeKI	GCWGC	7 cut(s)	59, 152, 359, 1466, 2030, 2044, 2123
ApoI	RAATTY	3 cut(s)	122, 261, 1518
Asp700I	GAANNNNTTC	1 cut(s)	1625
AspLEI	GCGC	4 cut(s)	983, 1023, 1905, 1907
AspS9I	GGNCC	6 cut(s)	642, 894, 1270, 1439, 2070, 2071
AsuC2I	CCSGG	1 cut(s)	1315
AsuHPI	GGTGA	6 cut(s)	425, 733, 742, 896, 1048, 2285
AvaII	GGWCC	2 cut(s)	642, 894
AxyI	CCTNAGG	1 cut(s)	530
BaeGI	GKGCMC	3 cut(s)	218, 1151, 2074
BanI	GGYRCC	1 cut(s)	213
BanII	GRGCYC	2 cut(s)	1416, 2074
Bbv12I	GWGCWC	2 cut(s)	1416, 1782
BbvI	GCAGC	7 cut(s)	71, 164, 346, 1478, 2031, 2042, 2110
BccI	CCATC	4 cut(s)	305, 664, 2106, 2194
BceAI	ACGGC	1 cut(s)	1284
BciT130I	CCWGG	3 cut(s)	640, 892, 1685
BclI	TGATCA	2 cut(s)	1176, 1674
BcnI	CCSGG	1 cut(s)	1315
BcoDI	GTCTC	4 cut(s)	36, 176, 376, 1332
BfaI	CTAG	2 cut(s)	11, 2018
BfmI	CTRYAG	2 cut(s)	439, 1040
BglI	GCCNNNNNGGC	1 cut(s)	1315
BglII	AGATCT	1 cut(s)	2014
BisI	GCNGC	9 cut(s)	60, 153, 360, 394, 620, 1467, 2031, 2045, 2124
BlpI	GCTNAGC	2 cut(s)	75, 1140
BlsI	GCNGC	9 cut(s)	61, 154, 361, 395, 621, 1468, 2032, 2046, 2125
Bme1390I	CCNGG	4 cut(s)	640, 892, 1315, 1685
Bme18I	GGWCC	2 cut(s)	642, 894
BmgBI	CACGTC	1 cut(s)	1348
BmgT120I	GGNCC	6 cut(s)	642, 894, 1270, 1439, 2070, 2071
BmiI	GGNNCC	4 cut(s)	215, 1441, 2071, 2072
BmrFI	CCNGG	4 cut(s)	640, 892, 1315, 1685
BmrI	ACTGGG	1 cut(s)	730
BmsI	GCATC	7 cut(s)	490, 1147, 1393, 1614, 1699, 1722, 2283
BmuI	ACTGGG	1 cut(s)	730
BpmI	CTGGAG	1 cut(s)	245
Bpu10I	CCTNAGC	2 cut(s)	1060, 1462
Bpu1102I	GCTNAGC	2 cut(s)	75, 1140
BpuEI	CTTGAG	1 cut(s)	1112
BpuMI	CCSGG	1 cut(s)	1315
BsaAI	YACGTR	1 cut(s)	43
BsaHI	GRCGYC	1 cut(s)	185
BsaI	GGTCTC	2 cut(s)	36, 1332
BsaJI	CCNNGG	2 cut(s)	890, 1683
BsaXI	ACNNNNNCTCC	2 cut(s)	714, 744
Bsc4I	CCNNNNNNNGG	3 cut(s)	223, 639, 1348
Bse118I	RCCGGY	1 cut(s)	485
Bse1I	ACTGG	3 cut(s)	228, 736, 1949
Bse21I	CCTNAGG	1 cut(s)	530
Bse3DI	GCAATG	5 cut(s)	621, 654, 977, 1238, 1576
BseBI	CCWGG	3 cut(s)	640, 892, 1685
BseDI	CCNNGG	2 cut(s)	890, 1683
BseGI	GGATG	1 cut(s)	924
BseLI	CCNNNNNNNGG	3 cut(s)	223, 639, 1348
BseMI	GCAATG	5 cut(s)	621, 654, 977, 1238, 1576
BseMII	CTCAG	8 cut(s)	66, 180, 386, 590, 1013, 1131, 2091, 2268
BseNI	ACTGG	3 cut(s)	228, 736, 1949
BsePI	GCGCGC	1 cut(s)	1903
BseRI	GAGGAG	3 cut(s)	121, 124, 194
BseSI	GKGCMC	3 cut(s)	218, 1151, 2074
BseXI	GCAGC	7 cut(s)	71, 164, 346, 1478, 2031, 2042, 2110
BseYI	CCCAGC	1 cut(s)	1144
BsgI	GTGCAG	3 cut(s)	78, 725, 2109
Bsh1236I	CGCG	5 cut(s)	473, 510, 1023, 1331, 1905
BshFI	GGCC	7 cut(s)	251, 318, 330, 429, 1271, 1440, 2072
BshNI	GGYRCC	1 cut(s)	213
BsiHKAI	GWGCWC	2 cut(s)	1416, 1782
BsiSI	CCGG	5 cut(s)	252, 327, 426, 486, 1314
BslFI	GGGAC	1 cut(s)	641
BslI	CCNNNNNNNGG	3 cut(s)	223, 639, 1348
BsmAI	GTCTC	4 cut(s)	36, 176, 376, 1332
BsmBI	CGTCTC	1 cut(s)	176
BsmFI	GGGAC	1 cut(s)	641
BsmI	GAATGC	5 cut(s)	47, 691, 952, 1068, 1925
BsnI	GGCC	7 cut(s)	251, 318, 330, 429, 1271, 1440, 2072
Bso31I	GGTCTC	2 cut(s)	36, 1332
Bsp120I	GGGCCC	1 cut(s)	2070
Bsp1286I	GDGCHC	5 cut(s)	218, 1151, 1416, 1782, 2074
Bsp1407I	TGTACA	1 cut(s)	1381
Bsp143I	GATC	9 cut(s)	414, 651, 886, 1176, 1246, 1674, 1891, 2014, 2053
Bsp1720I	GCTNAGC	2 cut(s)	75, 1140
BspANI	GGCC	7 cut(s)	251, 318, 330, 429, 1271, 1440, 2072
BspCNI	CTCAG	8 cut(s)	67, 181, 385, 591, 1012, 1132, 2090, 2267
BspFNI	CGCG	5 cut(s)	473, 510, 1023, 1331, 1905
BspHI	TCATGA	1 cut(s)	465
BspLI	GGNNCC	4 cut(s)	215, 1441, 2071, 2072
BspMAI	CTGCAG	1 cut(s)	443
BspPI	GGATC	2 cut(s)	881, 2048
BspQI	GCTCTTC	1 cut(s)	1421
BspT107I	GGYRCC	1 cut(s)	213
BspTNI	GGTCTC	2 cut(s)	36, 1332
BsrDI	GCAATG	5 cut(s)	621, 654, 977, 1238, 1576
BsrFI	RCCGGY	1 cut(s)	485
BsrGI	TGTACA	1 cut(s)	1381
BsrI	ACTGG	3 cut(s)	228, 736, 1949
BssAI	RCCGGY	1 cut(s)	485
BssECI	CCNNGG	2 cut(s)	890, 1683
BssHII	GCGCGC	1 cut(s)	1903
BssMI	GATC	9 cut(s)	414, 651, 886, 1176, 1246, 1674, 1891, 2014, 2053
BssNAI	GTATAC	1 cut(s)	1793
BssNI	GRCGYC	1 cut(s)	185
Bst1107I	GTATAC	1 cut(s)	1793
Bst2UI	CCWGG	3 cut(s)	640, 892, 1685
Bst4CI	ACNGT	6 cut(s)	857, 898, 1343, 1363, 1657, 1722
Bst6I	CTCTTC	1 cut(s)	1421
BstACI	GRCGYC	1 cut(s)	185
BstAPI	GCANNNNNTGC	2 cut(s)	770, 2027
BstAUI	TGTACA	1 cut(s)	1381
BstBAI	YACGTR	1 cut(s)	43
BstC8I	GCNNGC	7 cut(s)	364, 368, 1066, 1311, 1778, 1882, 1905
BstEII	GGTNACC	1 cut(s)	730
BstF5I	GGATG	1 cut(s)	924
BstFNI	CGCG	5 cut(s)	473, 510, 1023, 1331, 1905
BstHHI	GCGC	4 cut(s)	983, 1023, 1905, 1907
BstKTI	GATC	9 cut(s)	417, 654, 889, 1179, 1249, 1677, 1894, 2017, 2056
BstMAI	GTCTC	4 cut(s)	36, 176, 376, 1332
BstMBI	GATC	9 cut(s)	414, 651, 886, 1176, 1246, 1674, 1891, 2014, 2053
BstMWI	GCNNNNNNNGC	9 cut(s)	500, 770, 779, 989, 1268, 1315, 2027, 2078, 2337
BstNI	CCWGG	3 cut(s)	640, 892, 1685
BstNSI	RCATGY	4 cut(s)	768, 871, 1799, 1884
BstPI	GGTNACC	1 cut(s)	730
BstSCI	CCNGG	4 cut(s)	638, 890, 1313, 1683
BstSFI	CTRYAG	2 cut(s)	439, 1040
BstSLI	GKGCMC	3 cut(s)	218, 1151, 2074
BstUI	CGCG	5 cut(s)	473, 510, 1023, 1331, 1905
BstV1I	GCAGC	7 cut(s)	71, 164, 346, 1478, 2031, 2042, 2110
BstX2I	RGATCY	1 cut(s)	2014
BstYI	RGATCY	1 cut(s)	2014
BstZ17I	GTATAC	1 cut(s)	1793
Bsu36I	CCTNAGG	1 cut(s)	530
BsuRI	GGCC	7 cut(s)	251, 318, 330, 429, 1271, 1440, 2072
BtrI	CACGTC	1 cut(s)	1348
BtsCI	GGATG	1 cut(s)	924
BtsI	GCAGTG	3 cut(s)	61, 448, 1167
BtsIMutI	CAGTG	6 cut(s)	61, 448, 596, 1167, 1615, 2247
Cac8I	GCNNGC	7 cut(s)	364, 368, 1066, 1311, 1778, 1882, 1905
CaiI	CAGNNNCTG	1 cut(s)	1562
CciI	TCATGA	1 cut(s)	465
CfoI	GCGC	4 cut(s)	983, 1023, 1905, 1907
Cfr10I	RCCGGY	1 cut(s)	485
Cfr13I	GGNCC	6 cut(s)	642, 894, 1270, 1439, 2070, 2071
CseI	GACGC	1 cut(s)	1337
Csp6I	GTAC	3 cut(s)	475, 1285, 1382
CspCI	CAANNNNNGTGG	4 cut(s)	209, 244, 636, 671
CviQI	GTAC	3 cut(s)	475, 1285, 1382
DpnI	GATC	9 cut(s)	416, 653, 888, 1178, 1248, 1676, 1893, 2016, 2055
DpnII	GATC	9 cut(s)	414, 651, 886, 1176, 1246, 1674, 1891, 2014, 2053
DraI	TTTAAA	2 cut(s)	864, 2178
DraIII	CACNNNGTG	1 cut(s)	511
EaeI	YGGCCR	1 cut(s)	249
Eam1104I	CTCTTC	1 cut(s)	1421
EarI	CTCTTC	1 cut(s)	1421
Ecl136II	GAGCTC	1 cut(s)	1414
Eco147I	AGGCCT	1 cut(s)	318
Eco24I	GRGCYC	2 cut(s)	1416, 2074
Eco31I	GGTCTC	2 cut(s)	36, 1332
Eco47I	GGWCC	2 cut(s)	642, 894
Eco53kI	GAGCTC	1 cut(s)	1414
Eco81I	CCTNAGG	1 cut(s)	530
Eco91I	GGTNACC	1 cut(s)	730
EcoICRI	GAGCTC	1 cut(s)	1414
EcoO109I	RGGNCCY	2 cut(s)	1439, 2070
EcoO65I	GGTNACC	1 cut(s)	730
EcoRII	CCWGG	3 cut(s)	638, 890, 1683
EcoT22I	ATGCAT	2 cut(s)	1882, 1886
EcoT38I	GRGCYC	2 cut(s)	1416, 2074
Esp3I	CGTCTC	1 cut(s)	176
FalI	AAGNNNNNCTT	4 cut(s)	369, 401, 1043, 1075
FaqI	GGGAC	1 cut(s)	641
FauNDI	CATATG	2 cut(s)	966, 1153
FbaI	TGATCA	2 cut(s)	1176, 1674
FblI	GTMKAC	1 cut(s)	1792
Fnu4HI	GCNGC	9 cut(s)	60, 153, 360, 394, 620, 1467, 2031, 2045, 2124
FokI	GGATG	1 cut(s)	931
FriOI	GRGCYC	2 cut(s)	1416, 2074
Fsp4HI	GCNGC	9 cut(s)	60, 153, 360, 394, 620, 1467, 2031, 2045, 2124
FspBI	CTAG	2 cut(s)	11, 2018
GlaI	GCGC	4 cut(s)	982, 1022, 1904, 1906
GluI	GCNGC	9 cut(s)	60, 153, 360, 394, 620, 1467, 2031, 2045, 2124
GsaI	CCCAGC	1 cut(s)	1148
GsuI	CTGGAG	1 cut(s)	245
HaeIII	GGCC	7 cut(s)	251, 318, 330, 429, 1271, 1440, 2072
HapII	CCGG	5 cut(s)	252, 327, 426, 486, 1314
HgaI	GACGC	1 cut(s)	1337
HhaI	GCGC	4 cut(s)	983, 1023, 1905, 1907
Hin1I	GRCGYC	1 cut(s)	185
Hin6I	GCGC	4 cut(s)	981, 1021, 1903, 1905
HinP1I	GCGC	4 cut(s)	981, 1021, 1903, 1905
HindIII	AAGCTT	2 cut(s)	1292, 2338
HinfI	GANTC	3 cut(s)	629, 1031, 2252
HpaII	CCGG	5 cut(s)	252, 327, 426, 486, 1314
HphI	GGTGA	6 cut(s)	425, 733, 742, 896, 1048, 2285
Hpy166II	GTNNAC	5 cut(s)	741, 1056, 1793, 1849, 1979
Hpy188I	TCNGA	8 cut(s)	190, 310, 341, 375, 499, 669, 696, 1246
Hpy188III	TCNNGA	3 cut(s)	466, 1919, 2057
Hpy8I	GTNNAC	5 cut(s)	741, 1056, 1793, 1849, 1979
Hpy99I	CGWCG	1 cut(s)	521
HpyAV	CCTTC	8 cut(s)	79, 187, 440, 576, 793, 1009, 2130, 2278
HpyCH4III	ACNGT	6 cut(s)	857, 898, 1343, 1363, 1657, 1722
HpyCH4IV	ACGT	4 cut(s)	42, 185, 1347, 1845
HpyF10VI	GCNNNNNNNGC	9 cut(s)	500, 770, 779, 989, 1268, 1315, 2027, 2078, 2337
HpySE526I	ACGT	4 cut(s)	42, 185, 1347, 1845
Hsp92I	GRCGYC	1 cut(s)	185
HspAI	GCGC	4 cut(s)	981, 1021, 1903, 1905
Ksp22I	TGATCA	2 cut(s)	1176, 1674
Kzo9I	GATC	9 cut(s)	414, 651, 886, 1176, 1246, 1674, 1891, 2014, 2053
LguI	GCTCTTC	1 cut(s)	1421
LmnI	GCTCC	5 cut(s)	111, 165, 1018, 1411, 1821
Lsp1109I	GCAGC	7 cut(s)	71, 164, 346, 1478, 2031, 2042, 2110
LweI	GCATC	7 cut(s)	490, 1147, 1393, 1614, 1699, 1722, 2283
MaeI	CTAG	2 cut(s)	11, 2018
MaeII	ACGT	4 cut(s)	42, 185, 1347, 1845
MaeIII	GTNAC	8 cut(s)	205, 659, 677, 730, 1237, 1343, 1737, 2239
MalI	GATC	9 cut(s)	416, 653, 888, 1178, 1248, 1676, 1893, 2016, 2055
MboI	GATC	9 cut(s)	414, 651, 886, 1176, 1246, 1674, 1891, 2014, 2053
MfeI	CAATTG	1 cut(s)	1209
MflI	RGATCY	1 cut(s)	2014
MhlI	GDGCHC	5 cut(s)	218, 1151, 1416, 1782, 2074
MluI	ACGCGT	1 cut(s)	1329
MlyI	GAGTC	2 cut(s)	623, 2246
MmeI	TCCRAC	2 cut(s)	1080, 2301
Mph1103I	ATGCAT	2 cut(s)	1882, 1886
MroXI	GAANNNNTTC	1 cut(s)	1625
MslI	CAYNNNNRTG	7 cut(s)	41, 544, 695, 1424, 1527, 1698, 2007
MspA1I	CMGCKG	2 cut(s)	359, 2033
MspI	CCGG	5 cut(s)	252, 327, 426, 486, 1314
MspR9I	CCNGG	4 cut(s)	640, 892, 1315, 1685
MunI	CAATTG	1 cut(s)	1209
Mva1269I	GAATGC	5 cut(s)	47, 691, 952, 1068, 1925
MvaI	CCWGG	3 cut(s)	640, 892, 1685
MvnI	CGCG	5 cut(s)	473, 510, 1023, 1331, 1905
MwoI	GCNNNNNNNGC	9 cut(s)	500, 770, 779, 989, 1268, 1315, 2027, 2078, 2337
NciI	CCSGG	1 cut(s)	1315
NdeI	CATATG	2 cut(s)	966, 1153
NdeII	GATC	9 cut(s)	414, 651, 886, 1176, 1246, 1674, 1891, 2014, 2053
NlaIV	GGNNCC	4 cut(s)	215, 1441, 2071, 2072
NmeAIII	GCCGAG	1 cut(s)	2307
NmuCI	GTSAC	4 cut(s)	730, 1237, 1343, 1737
NsiI	ATGCAT	2 cut(s)	1882, 1886
NspI	RCATGY	4 cut(s)	768, 871, 1799, 1884
OliI	CACNNNNGTG	1 cut(s)	41
PaeI	GCATGC	1 cut(s)	1884
PagI	TCATGA	1 cut(s)	465
PauI	GCGCGC	1 cut(s)	1903
PceI	AGGCCT	1 cut(s)	318
PciI	ACATGT	2 cut(s)	867, 1795
PciSI	GCTCTTC	1 cut(s)	1421
PctI	GAATGC	5 cut(s)	47, 691, 952, 1068, 1925
PdmI	GAANNNNTTC	1 cut(s)	1625
PfeI	GAWTC	1 cut(s)	1031
PfoI	TCCNGGA	1 cut(s)	638
PkrI	GCNGC	9 cut(s)	61, 154, 361, 395, 621, 1468, 2032, 2046, 2125
PleI	GAGTC	2 cut(s)	623, 2246
PpsI	GAGTC	2 cut(s)	623, 2246
Ppu21I	YACGTR	1 cut(s)	43
PscI	ACATGT	2 cut(s)	867, 1795
Psp124BI	GAGCTC	1 cut(s)	1416
Psp6I	CCWGG	3 cut(s)	638, 890, 1683
PspEI	GGTNACC	1 cut(s)	730
PspFI	CCCAGC	1 cut(s)	1144
PspGI	CCWGG	3 cut(s)	638, 890, 1683
PspN4I	GGNNCC	4 cut(s)	215, 1441, 2071, 2072
PspOMI	GGGCCC	1 cut(s)	2070
PspPI	GGNCC	6 cut(s)	642, 894, 1270, 1439, 2070, 2071
PstI	CTGCAG	1 cut(s)	443
PstNI	CAGNNNCTG	1 cut(s)	1562
PsuI	RGATCY	1 cut(s)	2014
PteI	GCGCGC	1 cut(s)	1903
PvuII	CAGCTG	2 cut(s)	359, 2033
RsaI	GTAC	3 cut(s)	476, 1286, 1383
RsaNI	GTAC	3 cut(s)	475, 1285, 1382
RseI	CAYNNNNRTG	7 cut(s)	41, 544, 695, 1424, 1527, 1698, 2007
SacI	GAGCTC	1 cut(s)	1416
SapI	GCTCTTC	1 cut(s)	1421
SatI	GCNGC	9 cut(s)	60, 153, 360, 394, 620, 1467, 2031, 2045, 2124
Sau3AI	GATC	9 cut(s)	414, 651, 886, 1176, 1246, 1674, 1891, 2014, 2053
Sau96I	GGNCC	6 cut(s)	642, 894, 1270, 1439, 2070, 2071
SchI	GAGTC	2 cut(s)	623, 2246
ScrFI	CCNGG	4 cut(s)	640, 892, 1315, 1685
SduI	GDGCHC	5 cut(s)	218, 1151, 1416, 1782, 2074
SfaNI	GCATC	7 cut(s)	490, 1147, 1393, 1614, 1699, 1722, 2283
SfcI	CTRYAG	2 cut(s)	439, 1040
SinI	GGWCC	2 cut(s)	642, 894
SmiMI	CAYNNNNRTG	7 cut(s)	41, 544, 695, 1424, 1527, 1698, 2007
SmlI	CTYRAG	1 cut(s)	1091
SmoI	CTYRAG	1 cut(s)	1091
SphI	GCATGC	1 cut(s)	1884
SseBI	AGGCCT	1 cut(s)	318
SspI	AATATT	1 cut(s)	277
SspMI	CTAG	2 cut(s)	11, 2018
SstI	GAGCTC	1 cut(s)	1416
StuI	AGGCCT	1 cut(s)	318
StyD4I	CCNGG	4 cut(s)	638, 890, 1313, 1683
TaaI	ACNGT	6 cut(s)	857, 898, 1343, 1363, 1657, 1722
TaiI	ACGT	4 cut(s)	45, 188, 1350, 1848
TaqI	TCGA	7 cut(s)	69, 516, 912, 938, 1487, 1643, 1857
TatI	WGTACW	1 cut(s)	1381
TauI	GCSGC	2 cut(s)	396, 622
TfiI	GAWTC	1 cut(s)	1031
TscAI	CASTG	6 cut(s)	61, 448, 603, 1167, 1615, 2254
TseFI	GTSAC	4 cut(s)	730, 1237, 1343, 1737
TseI	GCWGC	7 cut(s)	59, 152, 359, 1466, 2030, 2044, 2123
Tsp45I	GTSAC	4 cut(s)	730, 1237, 1343, 1737
TspDTI	ATGAA	9 cut(s)	17, 98, 470, 794, 1028, 1408, 1511, 1991, 2159
TspGWI	ACGGA	2 cut(s)	622, 735
TspRI	CASTG	6 cut(s)	61, 448, 603, 1167, 1615, 2254
VpaK11BI	GGWCC	2 cut(s)	642, 894
XapI	RAATTY	3 cut(s)	122, 261, 1518
XceI	RCATGY	4 cut(s)	768, 871, 1799, 1884
XcmI	CCANNNNNNNNNTGG	1 cut(s)	225
XmiI	GTMKAC	1 cut(s)	1792
XmnI	GAANNNNTTC	1 cut(s)	1625
XspI	CTAG	2 cut(s)	11, 2018
ZraI	GACGTC	1 cut(s)	186
Zsp2I	ATGCAT	2 cut(s)	1882, 1886

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.