Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0003542

Physical Location & Seq

Genomic Coordinates Forward (+)

26896261 .. 26903206

Gene Structure 6946 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g34000.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3672 bp

ATGGCTAAAGGGAGAATAAGGGCGAGGCTACGGCGGAGCCACCTCTACACATTCTTGCGAAAGCCAAAGGGCAATGAGGCAGGAGGGGAACCTCACCCTATCCAAGGTCCTGGGTACTCAAGAACCGTGCATTGTAACCAACCTCTGCTCCATCAAAAGAAACCATTCAAATACCGTTCAAATTACATATCGACCACAAAGTATAACCCGATCACATTCTTTCCCAAGGCACTCTTTGAGCAGTTCAGACGGGTTGCCAACATCTATTTTCTTTTGGCTGCCGGTCTTTCACTCACTCCTGTTTCTCCATTTGGTCCTTGGAGCATGATAGCTCCTTTGGCTTTTGTTGTTGGTCTCAGTATGGTAAAGGAAGCTGTGGAAGACTGGAATAGGTTCTTGCAGGATATGAAGGTTAATCTCCGGAAAGTACATGTTCATAAAGGAGATGGTGTTTTTGGACATAGGCCATGGCATAAGATTTTGGTCGGAGATGTGGTGAAAGTGGAAAAGGATCAATTCTTTCCTGCTGATTTGCTTCTATTGTCGTCAAGTTACGAGGATGGGTTCTGCTATGTTGAGACTATGAACTTAGATGGCGAGACAAATTTAAAGGTCAAGAGATGCTTGGAGGCAACCTCACCTTTGGATGATGACACAGCTTTCAAGGACTTCAGAGCAACAGTTCAATGTGAAGATCCAAATCCCAATCTCTATTCCTTTGTGGGTAATCTTGATCATGACCGGCAGGTTTATCCTCTTGAACCCGGTCAGATACTCCTGAGAGATTCAAAGCTCAGGAATACTAGTTATATCTATGGGGTAGTGATATTTACAGGTCATGATAGCAAAGTCATGCAGAATTCGACCAAGTCCCCCTCAAAAAGGAGTGGAATTGAGAAGAAAATGGATAAGATTATCTACATCCTTTTCTTCCTCCTTTTGGTGATCTCCTTGATCAGCTCAATAGGGTTTGGTGTGAAGACAAAACGCGATACGCCAAAGGCATGGTACTTACGACCAGACGATGCAGAAGATATGTATAGCCCCAAAAAACCTGCCGTGGCTGGCCTCATCCATCTGGTCACTGCTCTCATCCTTTATGGATATCTAATACCCATCTCTCTTTATGTTTCAATTGAGATTGTGAAGGTTTTGCAAGCGAGGTTCATTAACAATGACATACACATGTATGATGAAGAGCATGGAATTCCTGCTAATGCCCGGACATCAAATTTGAATGAGGAGTTAGGCCAGGTAGACACGATCCTTTCTGACAAAACTGGCACGTTAACCTGCAACCAGATGGACTTTCTTAAGTGTTGCATTGCTGGCATTGCATACGGTGTACGCTCCAGTGAAGTTGAACTTGCAGCAGCAAAACAGATGGCTACTGACCTTGAGGATCAGGACGAGCATGATGAAGAACTTGCCAATGTTCCCAGGAAAAGTCAAGGTGCATCATGGGGAAATGAAGTAGGATCAGAAATTGAGCTTGAAACCGTTGTTACATCCAAGGATGGTAGGGATCCGAAACCGGCCATAAAGGGGTTTAGCTTTTTGGACAGCCGCCTCATGGATGGAAATTGGATCAAAGAGCCCACCTGTGATGTGATCTTATTATTTTTGCGGATATTAGCTGTTTGCCATACTGCAATTCCTGAGCTAAGTGAAGAGACCGGCCAATATACATATGAAGCAGAGTCACCCGATGAAGGAGCTTTTCTTGTTGCAGCCCGTGAGTTAGGTTTTGAGTTCTGTAAAAGAAATCAATCCAGTGTGTATGTCCGCGAAAGGTATCCTGATCCAGAACAACCAGTGGAAAGGGAATATAAAATCTTAAATCTATTGGAATTCACTAGCAAAAGGAAGCGTATGTCAGTAATTGTGCGTGACGAAGATGGGCAATTATTACTTTTCTGCAAAGGTGCTGACAGCATCATTTTCGATCGACTGTCCAAGAATGGAAGAATTTATGAGGAAGCTAGTACCAAGCATTTGAATGAATATGGAGAAGCTGGGCTGCGTACGTTGGCACTTGCTTATAGAAAGCTTGAGGAATCCGAGTATGATGCTTGGAACAATGAATTTCAGAAAGCAAAAACATCTATCGGGGCTGATAGGGAGGTGATGCTCGAGCGAGTGGCAGAGAAGATGGAAAAAGACTTGATCATGGTTGGTGCTACAGCTGTGGAGGACAAATTGCAAAAAGGGGTGCCCCAATGCATAGACAATCTTGCACAAGCTGGTCTCAAGATCTGGGTGTTGACAGGGGATAAGATGGAAACTGCAATCAACATAGGATTTGCATGTAGTTTGCTGCGACAGGGCATGAAGCAGATCTGTATATCAACAGCAAATTTAGAGACGTTGGGACAAGATGGAAAAGAGGCTGTGAAAGACAACGTTTTGAATCAAATTACAAACGCCTCACAAATGATCAAGTTGGAAAGAGATCCACATGCGGCGTTTGCATTAATTATTGATGGAAAAACTTTAACCTATGCTTTGGAGGCTGATATGAAGCATCTATTCTTGGAACTAGCTGTTGATTGTGCATCTGTCATATGCTGTCGTGTTTCCCCTAAGCAGAAGGCATTGGTAACAAGGTTAGTTAGACAAGGAACTGGGAAAACTACATTAGCAATAGGTGATGGTGCAAATGATGTAGGAATGATTCAAGAAGCTGACATTGGTGTTGGAATCAGTGGCGTCGAAGGTATGCAGGCTGTGATGGCTAGTGACTTTGCTATTGCCCAGTTTCGATATTTGGAGAGACTTTTGGTTGTCCATGGACATTGGTGCTATAAAAGGATTGCTCAGATGATCTGCTATTTCTTCTACAAAAATATAGCATTCGGTCTGACCCTCTTCTACTTTGAGGCATTCACTGGATTTTCGGGGCAATCAATATATGATGACTGGTATATGCTATCGTTCAATGTTATTCTTACCTCATTGCCTGTCATATCACTTGGAGTATTTGAACAAGATGTTTCTTCCGAGGTCTGCTTACAGTTCCCTGCATTGTATCAGCAAGGAGCCCGAAATTTGTTTTTCGACTGGTACAGAATATTGGGGTGGATGGGCAATGGTGTATATTGCTCTCTCATTGTCTTCTTCCTCAACATTATCACCTTCAAAGACCAGTCCTTCAGATCTAATGGCCAAATTGCTGATATGGCTGCTATGGGTACAACTATGTTCAGTGGCATCATATGGGCTGTCAACTGCCAGATTGCTCTGGCTATGTGTCACTTTACATGGATTCAGCACTGCTTTATTTGGGGCAGTATTGCAATGTGGTACTTATTTCTCTTGATATACGGCATGATGTCGTTTTCTGGAAATGCCTACCAGATTCTAGTTGAAGTCCTCGGTCCTGCACCTATCTTCTGGTTAGCCACCCTGTTAGTTACACTTGCTTGTAATCTCCCGTACATTGTCCACATAGCCTTCCAAAGAAGTTTCAATCCAATGGATCACCATATCATCCAAGAAATCAAATACTACCGGAAAGATGTTGAGGATCAACGCATGTGGAAGAGGGAGGCATCTAAAGCAAGACAAGAAACCAAGATCGGGTTCTCAGCTCGGGTGGATGCAAAGATCAGACAGTTGAGAGCAAGGCTGCACAAGAAGCATACCCACGCAAACGCTATGTCCCCTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006900 GO:0006996 GO:0008150 GO:0009987 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031984 GO:0033036 GO:0034204 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045332 GO:0048193 GO:0048194 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

1224

Amino Acids

138.38

Weight (kDa)

6.66

Isoelectric Point (pI)

36.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhoLip_ATPase_N	PF16209	43 - 110	3.5e-24	Phospholipid-translocating ATPase N-terminal
Cation_ATPase	PF13246	541 - 736	1.3e-21	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	910 - 1158	7.8e-89	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17500 AT1G17500 AT1G54280 AT1G54280 AT1G54280 AT1G72700 AT1G72700 AT1G72700 AT3G13900 AT3G13900 AT3G13900
fragaria_vesca	FvH4_6g34000 FvH4_6g34000 FvH4_6g34000 FvH4_6g34000 FvH4_6g34000 FvH4_6g34000 FvH4_6g34000 FvH4_6g34000 FvH4_6g34000
malus_domestica	MD09G1190200.v1.1 MD17G1173300.v1.1
prunus_persica	Prupe.3G046100_v2.0.a1 Prupe.3G046100_v2.0.a1
pyrus_communis	pycom09g10670 pycom17g17330
rosa_chinensis	RchiOBHm_Chr2g0143971
rosa_laevigata	RLG00000020069
rosa_multiflora	Rmu_ssc0000393.1_g000036
rosa_roxburghii	Rroxscaffold_2G00101430
rosa_rugosa	Rorug02G0385400 Rorug02G0385500
rosa_samantha	Rh2AG438000 Rh2BG446400
rosa_wichuraiana	Rw2G035770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	736, 1063, 1301
AccB1I	GGYRCC	1 cut(s)	2212
AccI	GTMKAC	1 cut(s)	1257
AccII	CGCG	2 cut(s)	990, 1788
AccIII	TCCGGA	1 cut(s)	420
AciI	CCGC	5 cut(s)	34, 1567, 1627, 1786, 2462
AclI	AACGTT	1 cut(s)	2403
AcoI	YGGCCR	3 cut(s)	1536, 1678, 3163
AcsI	RAATTY	9 cut(s)	604, 859, 1206, 1231, 1850, 1968, 2084, 2356, 3046
AcuI	CTGAAG	2 cut(s)	655, 3136
AcyI	GRCGYC	1 cut(s)	2709
AfiI	CCNNNNNNNGG	7 cut(s)	104, 882, 940, 1545, 1573, 1712, 3579
AflII	CTTAAG	1 cut(s)	1313
AflIII	ACRYGT	2 cut(s)	430, 1185
AhlI	ACTAGT	1 cut(s)	803
AjnI	CCWGG	3 cut(s)	109, 1251, 1439
AjuI	GAANNNNNNNTTGG	4 cut(s)	2673, 2705, 3566, 3598
Alw26I	GTCTC	7 cut(s)	359, 572, 593, 1667, 2252, 2357, 2767
Ama87I	CYCGRG	2 cut(s)	2132, 3591
Aor13HI	TCCGGA	1 cut(s)	420
AoxI	GGCC	6 cut(s)	464, 1066, 1249, 1536, 1678, 3163
ApeKI	GCWGC	8 cut(s)	278, 1370, 1373, 1730, 2020, 2317, 3182, 3628
ApoI	RAATTY	9 cut(s)	604, 859, 1206, 1231, 1850, 1968, 2084, 2356, 3046
ArsI	GACNNNNNNTTYG	3 cut(s)	1216, 1248, 3644
AseI	ATTAAT	1 cut(s)	2474
Asp700I	GAANNNNTTC	2 cut(s)	164, 392
AspS9I	GGNCC	3 cut(s)	107, 314, 3377
AsuC2I	CCSGG	2 cut(s)	765, 1222
AsuHPI	GGTGA	9 cut(s)	86, 508, 630, 955, 1695, 2137, 2660, 3124, 3473
AvaI	CYCGRG	2 cut(s)	2132, 3591
AvaII	GGWCC	3 cut(s)	107, 314, 3377
BaeGI	GKGCMC	1 cut(s)	2217
BalI	TGGCCA	1 cut(s)	3165
BamHI	GGATCC	1 cut(s)	1525
BanI	GGYRCC	1 cut(s)	2212
BanII	GRGCYC	2 cut(s)	1599, 3043
BbsI	GAAGAC	3 cut(s)	387, 986, 3106
BbvI	GCAGC	8 cut(s)	265, 1382, 1385, 1742, 2007, 2304, 3169, 3615
BceAI	ACGGC	3 cut(s)	47, 1043, 3340
BcgI	CGANNNNNNTGC	4 cut(s)	1924, 1958, 2051, 2085
BciT130I	CCWGG	3 cut(s)	111, 1253, 1441
BciVI	GTATCC	1 cut(s)	1806
BclI	TGATCA	4 cut(s)	733, 954, 2166, 2436
BcnI	CCSGG	2 cut(s)	765, 1222
BcoDI	GTCTC	7 cut(s)	359, 572, 593, 1667, 2252, 2357, 2767
BcuI	ACTAGT	1 cut(s)	803
BfaI	CTAG	6 cut(s)	804, 1857, 1983, 2540, 2736, 3362
BfmI	CTRYAG	1 cut(s)	2181
BfrI	CTTAAG	1 cut(s)	1313
BfuAI	ACCTGC	3 cut(s)	736, 1063, 1301
BfuI	GTATCC	1 cut(s)	1806
BglII	AGATCT	3 cut(s)	2253, 2337, 3155
Bme1390I	CCNGG	5 cut(s)	111, 765, 1222, 1253, 1441
Bme18I	GGWCC	3 cut(s)	107, 314, 3377
BmeT110I	CYCGRG	2 cut(s)	2132, 3591
BmgT120I	GGNCC	3 cut(s)	107, 314, 3377
BmiI	GGNNCC	5 cut(s)	38, 90, 1527, 2214, 3040
BmrFI	CCNGG	5 cut(s)	111, 765, 1222, 1253, 1441
BmrI	ACTGGG	2 cut(s)	2634, 2749
BmuI	ACTGGG	2 cut(s)	2634, 2749
BpiI	GAAGAC	3 cut(s)	387, 986, 3106
BplI	GAGNNNNNCTC	2 cut(s)	620, 652
BpmI	CTGGAG	1 cut(s)	1336
Bpu10I	CCTNAGC	3 cut(s)	794, 1659, 2583
BpuEI	CTTGAG	4 cut(s)	103, 1418, 2072, 2234
BpuMI	CCSGG	2 cut(s)	765, 1222
BsaBI	GATNNNNATC	1 cut(s)	699
BsaHI	GRCGYC	1 cut(s)	2709
BsaI	GGTCTC	3 cut(s)	359, 1667, 2252
BsaWI	WCCGGW	2 cut(s)	420, 3510
BsaXI	ACNNNNNCTCC	6 cut(s)	132, 162, 435, 465, 480, 510
Bsc4I	CCNNNNNNNGG	7 cut(s)	104, 882, 940, 1545, 1573, 1712, 3579
Bse118I	RCCGGY	4 cut(s)	281, 741, 1534, 1676
Bse3DI	GCAATG	6 cut(s)	79, 1323, 1332, 2954, 3094, 3303
Bse8I	GATNNNNATC	1 cut(s)	699
BseAI	TCCGGA	1 cut(s)	420
BseBI	CCWGG	3 cut(s)	111, 1253, 1441
BseJI	GATNNNNATC	1 cut(s)	699
BseLI	CCNNNNNNNGG	7 cut(s)	104, 882, 940, 1545, 1573, 1712, 3579
BseMI	GCAATG	6 cut(s)	79, 1323, 1332, 2954, 3094, 3303
BseMII	CTCAG	6 cut(s)	370, 770, 808, 1650, 2831, 3600
BseRI	GAGGAG	1 cut(s)	1256
BseSI	GKGCMC	1 cut(s)	2217
BseXI	GCAGC	8 cut(s)	265, 1382, 1385, 1742, 2007, 2304, 3169, 3615
BseYI	CCCAGC	1 cut(s)	2015
BsgI	GTGCAG	2 cut(s)	3366, 3614
Bsh1236I	CGCG	2 cut(s)	990, 1788
Bsh1285I	CGRYCG	1 cut(s)	1948
BshFI	GGCC	6 cut(s)	466, 1068, 1251, 1538, 1680, 3165
BshNI	GGYRCC	1 cut(s)	2212
BsiEI	CGRYCG	1 cut(s)	1948
BsiHKCI	CYCGRG	2 cut(s)	2132, 3591
BsiSI	CCGG	8 cut(s)	282, 421, 742, 765, 1222, 1535, 1677, 3511
BsiWI	CGTACG	1 cut(s)	2024
BslFI	GGGAC	3 cut(s)	856, 2385, 3646
BslI	CCNNNNNNNGG	7 cut(s)	104, 882, 940, 1545, 1573, 1712, 3579
BsmAI	GTCTC	7 cut(s)	359, 572, 593, 1667, 2252, 2357, 2767
BsmBI	CGTCTC	1 cut(s)	2357
BsmFI	GGGAC	3 cut(s)	856, 2385, 3646
BsmI	GAATGC	2 cut(s)	2852, 2882
BsnI	GGCC	6 cut(s)	466, 1068, 1251, 1538, 1680, 3165
Bso31I	GGTCTC	3 cut(s)	359, 1667, 2252
BsoBI	CYCGRG	2 cut(s)	2132, 3591
Bsp1286I	GDGCHC	3 cut(s)	1599, 2217, 3043
Bsp13I	TCCGGA	1 cut(s)	420
Bsp19I	CCATGG	2 cut(s)	467, 2788
BspACI	CCGC	5 cut(s)	34, 1567, 1627, 1786, 2462
BspANI	GGCC	6 cut(s)	466, 1068, 1251, 1538, 1680, 3165
BspCNI	CTCAG	6 cut(s)	369, 771, 807, 1651, 2830, 3599
BspEI	TCCGGA	1 cut(s)	420
BspFNI	CGCG	2 cut(s)	990, 1788
BspHI	TCATGA	2 cut(s)	736, 838
BspLI	GGNNCC	5 cut(s)	38, 90, 1527, 2214, 3040
BspMI	ACCTGC	3 cut(s)	736, 1063, 1301
BspQI	GCTCTTC	1 cut(s)	1191
BspT107I	GGYRCC	1 cut(s)	2212
BspTI	CTTAAG	1 cut(s)	1313
BspTNI	GGTCTC	3 cut(s)	359, 1667, 2252
BsrDI	GCAATG	6 cut(s)	79, 1323, 1332, 2954, 3094, 3303
BsrFI	RCCGGY	4 cut(s)	281, 741, 1534, 1676
BssAI	RCCGGY	4 cut(s)	281, 741, 1534, 1676
BssNI	GRCGYC	1 cut(s)	2709
BssT1I	CCWWGG	6 cut(s)	103, 225, 317, 467, 1512, 2788
Bst2UI	CCWGG	3 cut(s)	111, 1253, 1441
Bst4CI	ACNGT	8 cut(s)	127, 176, 682, 1343, 1501, 1953, 3015, 3615
Bst6I	CTCTTC	4 cut(s)	1191, 1665, 2873, 3536
BstACI	GRCGYC	1 cut(s)	2709
BstAFI	CTTAAG	1 cut(s)	1313
BstC8I	GCNNGC	4 cut(s)	1066, 1158, 1330, 2724
BstDEI	CTNAG	9 cut(s)	356, 589, 779, 794, 1659, 1664, 2583, 2817, 3586
BstDSI	CCRYGG	3 cut(s)	467, 1059, 2788
BstENI	CCTNNNNNAGG	2 cut(s)	102, 880
BstFNI	CGCG	2 cut(s)	990, 1788
BstMAI	GTCTC	7 cut(s)	359, 572, 593, 1667, 2252, 2357, 2767
BstMCI	CGRYCG	1 cut(s)	1948
BstMWI	GCNNNNNNNGC	9 cut(s)	338, 1329, 1334, 2468, 2510, 2732, 3179, 3557, 3637
BstNI	CCWGG	3 cut(s)	111, 1253, 1441
BstNSI	RCATGY	5 cut(s)	434, 1189, 2310, 2462, 3538
BstSCI	CCNGG	5 cut(s)	109, 763, 1220, 1251, 1439
BstSFI	CTRYAG	1 cut(s)	2181
BstSLI	GKGCMC	1 cut(s)	2217
BstUI	CGCG	2 cut(s)	990, 1788
BstV1I	GCAGC	8 cut(s)	265, 1382, 1385, 1742, 2007, 2304, 3169, 3615
BstV2I	GAAGAC	3 cut(s)	387, 986, 3106
BstX2I	RGATCY	6 cut(s)	694, 1525, 2253, 2337, 2452, 3155
BstXI	CCANNNNNNTGG	2 cut(s)	110, 1005
BstYI	RGATCY	6 cut(s)	694, 1525, 2253, 2337, 2452, 3155
BsuI	GTATCC	1 cut(s)	1806
BsuRI	GGCC	6 cut(s)	466, 1068, 1251, 1538, 1680, 3165
BtgI	CCRYGG	3 cut(s)	467, 1059, 2788
BtsI	GCAGTG	2 cut(s)	1083, 3271
BtsIMutI	CAGTG	8 cut(s)	1083, 1360, 1780, 1821, 2710, 2886, 3211, 3271
BveI	ACCTGC	3 cut(s)	736, 1063, 1301
Cac8I	GCNNGC	4 cut(s)	1066, 1158, 1330, 2724
CciI	TCATGA	2 cut(s)	736, 838
Cfr10I	RCCGGY	4 cut(s)	281, 741, 1534, 1676
Cfr13I	GGNCC	3 cut(s)	107, 314, 3377
CseI	GACGC	1 cut(s)	2698
CspCI	CAANNNNNGTGG	2 cut(s)	3518, 3553
DdeI	CTNAG	9 cut(s)	356, 589, 779, 794, 1659, 1664, 2583, 2817, 3586
DraI	TTTAAA	1 cut(s)	609
EaeI	YGGCCR	3 cut(s)	1536, 1678, 3163
Eam1104I	CTCTTC	4 cut(s)	1191, 1665, 2873, 3536
EarI	CTCTTC	4 cut(s)	1191, 1665, 2873, 3536
EciI	GGCGGA	1 cut(s)	49
Eco130I	CCWWGG	6 cut(s)	103, 225, 317, 467, 1512, 2788
Eco24I	GRGCYC	2 cut(s)	1599, 3043
Eco31I	GGTCTC	3 cut(s)	359, 1667, 2252
Eco32I	GATATC	1 cut(s)	1106
Eco47I	GGWCC	3 cut(s)	107, 314, 3377
Eco57I	CTGAAG	2 cut(s)	655, 3136
Eco88I	CYCGRG	2 cut(s)	2132, 3591
EcoNI	CCTNNNNNAGG	2 cut(s)	102, 880
EcoO109I	RGGNCCY	1 cut(s)	107
EcoRI	GAATTC	3 cut(s)	859, 1206, 1850
EcoRII	CCWGG	3 cut(s)	109, 1251, 1439
EcoRV	GATATC	1 cut(s)	1106
EcoT14I	CCWWGG	6 cut(s)	103, 225, 317, 467, 1512, 2788
EcoT22I	ATGCAT	1 cut(s)	2225
EcoT38I	GRGCYC	2 cut(s)	1599, 3043
ErhI	CCWWGG	6 cut(s)	103, 225, 317, 467, 1512, 2788
Esp3I	CGTCTC	1 cut(s)	2357
FalI	AAGNNNNNCTT	6 cut(s)	218, 250, 608, 640, 1350, 1382
FaqI	GGGAC	3 cut(s)	856, 2385, 3646
FauNDI	CATATG	3 cut(s)	1690, 2564, 3215
FbaI	TGATCA	4 cut(s)	733, 954, 2166, 2436
FblI	GTMKAC	1 cut(s)	1257
FriOI	GRGCYC	2 cut(s)	1599, 3043
FspBI	CTAG	6 cut(s)	804, 1857, 1983, 2540, 2736, 3362
GsaI	CCCAGC	1 cut(s)	2019
GsuI	CTGGAG	1 cut(s)	1336
HaeIII	GGCC	6 cut(s)	466, 1068, 1251, 1538, 1680, 3165
HapII	CCGG	8 cut(s)	282, 421, 742, 765, 1222, 1535, 1677, 3511
HgaI	GACGC	1 cut(s)	2698
Hin1I	GRCGYC	1 cut(s)	2709
HincII	GTYRAC	3 cut(s)	1290, 2265, 3226
HindII	GTYRAC	3 cut(s)	1290, 2265, 3226
HindIII	AAGCTT	1 cut(s)	2048
HinfI	GANTC	8 cut(s)	785, 1700, 2057, 2410, 2674, 2700, 3265, 3358
HpaI	GTTAAC	1 cut(s)	1290
HpaII	CCGG	8 cut(s)	282, 421, 742, 765, 1222, 1535, 1677, 3511
HphI	GGTGA	9 cut(s)	86, 508, 630, 955, 1695, 2137, 2660, 3124, 3473
Hpy166II	GTNNAC	6 cut(s)	1258, 1290, 1346, 2265, 3226, 3445
Hpy8I	GTNNAC	6 cut(s)	1258, 1290, 1346, 2265, 3226, 3445
Hpy99I	CGWCG	1 cut(s)	2714
HpyAV	CCTTC	8 cut(s)	403, 1141, 1706, 2584, 2708, 3145, 3160, 3463
HpyCH4III	ACNGT	8 cut(s)	127, 176, 682, 1343, 1501, 1953, 3015, 3615
HpyCH4IV	ACGT	4 cut(s)	1286, 2027, 2366, 2403
HpyF10VI	GCNNNNNNNGC	9 cut(s)	338, 1329, 1334, 2468, 2510, 2732, 3179, 3557, 3637
HpyF3I	CTNAG	9 cut(s)	356, 589, 779, 794, 1659, 1664, 2583, 2817, 3586
HpySE526I	ACGT	4 cut(s)	1286, 2027, 2366, 2403
Hsp92I	GRCGYC	1 cut(s)	2709
Kpn2I	TCCGGA	1 cut(s)	420
Ksp22I	TGATCA	4 cut(s)	733, 954, 2166, 2436
KspAI	GTTAAC	1 cut(s)	1290
LguI	GCTCTTC	1 cut(s)	1191
LmnI	GCTCC	7 cut(s)	36, 153, 321, 337, 1355, 1715, 3038
Lsp1109I	GCAGC	8 cut(s)	265, 1382, 1385, 1742, 2007, 2304, 3169, 3615
MaeI	CTAG	6 cut(s)	804, 1857, 1983, 2540, 2736, 3362
MaeII	ACGT	4 cut(s)	1286, 2027, 2366, 2403
MfeI	CAATTG	1 cut(s)	1134
MflI	RGATCY	6 cut(s)	694, 1525, 2253, 2337, 2452, 3155
MhlI	GDGCHC	3 cut(s)	1599, 2217, 3043
MlsI	TGGCCA	1 cut(s)	3165
MluNI	TGGCCA	1 cut(s)	3165
MlyI	GAGTC	1 cut(s)	1709
MmeI	TCCRAC	3 cut(s)	466, 2424, 2677
Mox20I	TGGCCA	1 cut(s)	3165
Mph1103I	ATGCAT	1 cut(s)	2225
MroI	TCCGGA	1 cut(s)	420
MroXI	GAANNNNTTC	2 cut(s)	164, 392
MscI	TGGCCA	1 cut(s)	3165
MseI	TTAA	8 cut(s)	414, 608, 1170, 1289, 1314, 1838, 2474, 2495
MslI	CAYNNNNRTG	3 cut(s)	1184, 1188, 1998
Msp20I	TGGCCA	1 cut(s)	3165
MspA1I	CMGCKG	1 cut(s)	2186
MspCI	CTTAAG	1 cut(s)	1313
MspI	CCGG	8 cut(s)	282, 421, 742, 765, 1222, 1535, 1677, 3511
MspR9I	CCNGG	5 cut(s)	111, 765, 1222, 1253, 1441
MunI	CAATTG	1 cut(s)	1134
Mva1269I	GAATGC	2 cut(s)	2852, 2882
MvaI	CCWGG	3 cut(s)	111, 1253, 1441
MvnI	CGCG	2 cut(s)	990, 1788
MwoI	GCNNNNNNNGC	9 cut(s)	338, 1329, 1334, 2468, 2510, 2732, 3179, 3557, 3637
NciI	CCSGG	2 cut(s)	765, 1222
NcoI	CCATGG	2 cut(s)	467, 2788
NdeI	CATATG	3 cut(s)	1690, 2564, 3215
NlaIV	GGNNCC	5 cut(s)	38, 90, 1527, 2214, 3040
NmuCI	GTSAC	5 cut(s)	1081, 1701, 1889, 2738, 3251
NsiI	ATGCAT	1 cut(s)	2225
NspI	RCATGY	5 cut(s)	434, 1189, 2310, 2462, 3538
PaeR7I	CTCGAG	1 cut(s)	2132
PagI	TCATGA	2 cut(s)	736, 838
PciI	ACATGT	2 cut(s)	430, 1185
PciSI	GCTCTTC	1 cut(s)	1191
PctI	GAATGC	2 cut(s)	2852, 2882
PdmI	GAANNNNTTC	2 cut(s)	164, 392
PfeI	GAWTC	7 cut(s)	785, 2057, 2410, 2674, 2700, 3265, 3358
Pfl23II	CGTACG	1 cut(s)	2024
PflFI	GACNNNGTC	1 cut(s)	868
Ple19I	CGATCG	1 cut(s)	1948
PleI	GAGTC	1 cut(s)	1708
PpsI	GAGTC	1 cut(s)	1708
PpuMI	RGGWCCY	1 cut(s)	107
PscI	ACATGT	2 cut(s)	430, 1185
PshBI	ATTAAT	1 cut(s)	2474
Psp1406I	AACGTT	1 cut(s)	2403
Psp5II	RGGWCCY	1 cut(s)	107
Psp6I	CCWGG	3 cut(s)	109, 1251, 1439
PspFI	CCCAGC	1 cut(s)	2015
PspGI	CCWGG	3 cut(s)	109, 1251, 1439
PspLI	CGTACG	1 cut(s)	2024
PspN4I	GGNNCC	5 cut(s)	38, 90, 1527, 2214, 3040
PspPI	GGNCC	3 cut(s)	107, 314, 3377
PspPPI	RGGWCCY	1 cut(s)	107
PspXI	VCTCGAGB	1 cut(s)	2132
PsuI	RGATCY	6 cut(s)	694, 1525, 2253, 2337, 2452, 3155
PsyI	GACNNNGTC	1 cut(s)	868
PvuI	CGATCG	1 cut(s)	1948
PvuII	CAGCTG	1 cut(s)	2186
RseI	CAYNNNNRTG	3 cut(s)	1184, 1188, 1998
SapI	GCTCTTC	1 cut(s)	1191
SaqAI	TTAA	8 cut(s)	414, 608, 1170, 1289, 1314, 1838, 2474, 2495
Sau96I	GGNCC	3 cut(s)	107, 314, 3377
SchI	GAGTC	1 cut(s)	1709
ScrFI	CCNGG	5 cut(s)	111, 765, 1222, 1253, 1441
SduI	GDGCHC	3 cut(s)	1599, 2217, 3043
SfcI	CTRYAG	1 cut(s)	2181
Sfr274I	CTCGAG	1 cut(s)	2132
SinI	GGWCC	3 cut(s)	107, 314, 3377
SlaI	CTCGAG	1 cut(s)	2132
SmiMI	CAYNNNNRTG	3 cut(s)	1184, 1188, 1998
SmlI	CTYRAG	6 cut(s)	118, 1313, 1397, 2051, 2132, 2249
SmoI	CTYRAG	6 cut(s)	118, 1313, 1397, 2051, 2132, 2249
SpeI	ACTAGT	1 cut(s)	803
SsiI	CCGC	5 cut(s)	34, 1567, 1627, 1786, 2462
SspI	AATATT	1 cut(s)	3072
SspMI	CTAG	6 cut(s)	804, 1857, 1983, 2540, 2736, 3362
StyD4I	CCNGG	5 cut(s)	109, 763, 1220, 1251, 1439
StyI	CCWWGG	6 cut(s)	103, 225, 317, 467, 1512, 2788
TaaI	ACNGT	8 cut(s)	127, 176, 682, 1343, 1501, 1953, 3015, 3615
TaiI	ACGT	4 cut(s)	1289, 2030, 2369, 2406
TaqI	TCGA	8 cut(s)	191, 863, 1944, 1948, 2133, 2712, 2761, 3057
TaqII	GACCGA	2 cut(s)	2846, 3365
TatI	WGTACW	1 cut(s)	427
TauI	GCSGC	2 cut(s)	1569, 2465
TfiI	GAWTC	7 cut(s)	785, 2057, 2410, 2674, 2700, 3265, 3358
Tru1I	TTAA	8 cut(s)	414, 608, 1170, 1289, 1314, 1838, 2474, 2495
Tru9I	TTAA	8 cut(s)	414, 608, 1170, 1289, 1314, 1838, 2474, 2495
TscAI	CASTG	8 cut(s)	1090, 1360, 1780, 1821, 2710, 2893, 3211, 3278
TseFI	GTSAC	5 cut(s)	1081, 1701, 1889, 2738, 3251
TseI	GCWGC	8 cut(s)	278, 1370, 1373, 1730, 2020, 2317, 3182, 3628
Tsp45I	GTSAC	5 cut(s)	1081, 1701, 1889, 2738, 3251
TspRI	CASTG	8 cut(s)	1090, 1360, 1780, 1821, 2710, 2893, 3211, 3278
Tth111I	GACNNNGTC	1 cut(s)	868
Vha464I	CTTAAG	1 cut(s)	1313
VpaK11BI	GGWCC	3 cut(s)	107, 314, 3377
VspI	ATTAAT	1 cut(s)	2474
XagI	CCTNNNNNAGG	2 cut(s)	102, 880
XapI	RAATTY	9 cut(s)	604, 859, 1206, 1231, 1850, 1968, 2084, 2356, 3046
XceI	RCATGY	5 cut(s)	434, 1189, 2310, 2462, 3538
XcmI	CCANNNNNNNNNTGG	1 cut(s)	315
XhoI	CTCGAG	1 cut(s)	2132
XmiI	GTMKAC	1 cut(s)	1257
XmnI	GAANNNNTTC	2 cut(s)	164, 392
XspI	CTAG	6 cut(s)	804, 1857, 1983, 2540, 2736, 3362
Zsp2I	ATGCAT	1 cut(s)	2225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.