Prupe.3G046100_v2.0.a1

Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
3292441 .. 3299581
7141 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G046100.2

Sequence Viewer

Length: 3708 bp
ATGGCAGGAGGAAAGATAAGGGCAAAGCTCCGGCAGAGCCAGCTTTACACATTCTGCCAAAAGCCAAAAGCCAGTGAGACAGAGGCGTCTCGCCCAATCCAAGGAGTCGGGTTCTCAAGAACTGTATATTGTAACCAACCTCTTCTCCATCAGAAGAAGCCTTATAAATACCGTTCAAATTTTATATCAACCACCAAGTATAACCCTATCACGTTCTTGCCCAAGGCACTGTTTGAGCAATTCAGACGGGTTGCCAATGTGTATTTTCTTTTGGCTGCCATTCTTTCCCTCACCCCTGTCTCACCATTCTCTCCTGTGAGCATGATTGCTCCTCTGGTATTTGTTGTTGGTCTCAGTATGGCAAAGGAAGCACTGGAAGATTGGAATAGGTTCTTGCAGGATATGAAGGTTAATCTCCGAAAAGTGATCGTTCATAAAGGAGATGGTGTTTTTGGTTTTAGGCCATGGCATAAAATTCAGGTTGGAGACATCTTGAAAGTGGAAAAGGATCAATTCTTTCCTGCAGATTTGCTTCTTTTGTCGTCAAGTTATGAAGACGGAATTTGCTATGTTGAGACTATGAACTTAGATGGTGAGACGAATTTGAAGGTAAAGAGATGTTTGGAAGTAACCTCACCTTTGGAGGATGATGGCACTTTCAAGGATTTCACTGCAACAATTCAATGTGAAGATCCAAACCCCAATCTTTACTCCTTTGTGGGTAATCTTGAATACGATCGGCAGGTTTATCCTCTCGAACCTGGTCAAATACTCCTCAGAGATTCGAAGCTCAGGAATACAGCTTATGTGTATGGGGTGGTGATTTTCACAGGCCATGATAGCAAAGTCATGCAAAATTCAACAAAATCCCCTTCAAAAAGGAGTGGTATAGAAAGGAAAATGGATAATATTATCTATATCCTTTTCACCCTCCTTGTAGGGATCTCATTGATCAGCTCAATAGGCTTTGCTGTGAAGACAAAATTCAGTATGCCAGACTCGTGGTACTTGCGCCCTGATCAAACAACAGATATGTACAGCCCAGAAAAGCCTGCCTTGTCAGGCCTTATCCATCTGGTTACTGCTCTCATCCTTTATGGATATCTAATACCCATCTCTCTGTATGTTTCGATTGAGGTTGTGAAGGTTTTGCAAGCAACCTTCATTAACCAAGACATACACATGTATGATGAAGAGACTGGGAATCCTGCTCAAGCACGGACATCAAATTTGAATGAGGAGTTAGGCCAGGTAGACACCATCCTCTCTGATAAAACTGGCACGTTAACCTGCAACCAAATGGACTTTCTCAAGTGTTCCATTGGTGGTACTGCGTATGGTGTCCGTTCTAGTGAAGTTGAACTTGCAGCAGCAAAACAGATGGCTTTTGACCTTGAGGACAATGAAGATGATCTTTCTAATTTTCCCATGCGAAAACATAATCCGCGTGTATCATGGGGGAATGGAGTAGGATCAGAAATTGAGCTGGAGACTGTTGTTACTTCCAAAGATGATAAGGATCGGAAACCTGCGATAAAGGGGTTTAGCTTTGAGGACAGCCGGCTTATGAATGGAAATTGGTTGAACGAGCCCAGCCCTGATGTGATTTCATTATTTTTACGAATATTAGCAGTTTGCCACACTGCAATTCCCGAGCTAAATGAAGGGACTGGCAGTTATACGTATGAAGCAGAGTCACCTGATGAAGCGGCTTTTCTTGTTGCAGCAAGAGAGTTAGGTTTTGAGTTTTGTAAAAGAAATCAATCGAGTGTGTTTGTCCATGAGAAGTATCCTTATTCAGGACAACCAGTGGACAGGGAGTACAAAGTCTTAAATCTATTGGAGTTCACTAGCAAAAGGAAGCGTATGTCTGTTATTGTACGAGATGAAGATGGACAGATTTTTCTTTTTTGCAAAGGTGCTGACAGCATCATTTTTGATCGACTTTCCAAGAATGGAAGAATGTATGAGGAAGCTACTACGAAGCATTTGAATGAATATGGAGAAGCTGGGTTGCGTACATTGGCACTTTCTTATAGAAGGCTTGAGGAGGCCGAGTACTCTGCTTGGAGCAATGAGTTTCAGAAAGCAAAAACGTCTATTGGGGCTGATAGAGATGGAATGCTTGAGCGAGTAGCAGATAAGATGGAAAGAGATTTGATCCTTGTTGGTGCAACAGCTGTGGAGGACAAATTGCAAAAAGGGGTGCCCCAATGCATAGACAATCTTGCACAAGCTGGTCTTAAGATATGGGTTTTGACAGGGGATAAGATGGAAACTGCAATCAACATAGGATTTGCATGTAGTTTGCTCCGACAGGGCATGAAGCAGATCTGTATATCAACAGCGAATTTCGACACGTTGGGACAAGATAGCAAAGAGACTTTGTGTCTTTTGACAAATGATCAGGCTGTGAAAGATAACATTTTGAATCAAATTACCAATGCCTCACAAATGATCAAGTTGGAGAAAGATCCACATGCAGCATTTGCATTAATTATTGATGGGAAAACTTTAACCTATGCTTTGGAGGATGATATGAAGCATCTATTCTTGGGTTTAGCTGTTGACTGTGCATCAGTCATATGCTGCCGTGTCTCTCCCAAGCAGAAGGCACTGGTAACAAGGTTAGTCAAACAAGGAACTGGAAAAACCACATTAGCAATTGGCGATGGTGCAAATGATGTTGGAATGATACAAGAAGCTGACATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCTGTGATGGCTAGTGATTTTTCTATTGCCCAGTTTCGGTTTTTGGAGAGACTTTTGGTAGTCCATGGGCATTGGTGCTATAAGAGGATTGCTCAGATGGTTTGCTATTTCTTCTACAAAAATATTGCATTTGGTCTCACCCTCTTCTACTTTGAGGCATTCACGGGTTTCTCTGGGCAATCAATATATGATGACTGGTACATGTTATCGTTCAATGTCATTCTTACCTCATTGCCTGTCATATCACTTGGAGTCTTTGAACAAGATGTGTCTTCCGAGGTCTGCTTACAGTTCCCTGCATTGTATCAGCAAGGACCTAGAAATTTGTTCTTCGACTGGTACAGGATACTGGGGTGGATGGGCAATGGTGTCTATTGCTCTCTAATCATCTTCTTCCTCAACATTATCATCTTCTATGACCAGGCCTTCCGTTCTAATGGCCAGACTGCTGATATGGCTGCTATGGGTACCACGATGTTCAGTTGCATTGTCTGGGCTGTTAACTGCCAGATTGCTCTCACAATGAGCCACTTTACATGGATTCAGCACCTCTTTGTGTGGGGCAGTATTGCAATGTGGTACCTATTTCTCTTACTTTACGGCATGCTGTCTCCAGTTCACTCCAAGAATGCCTATCAAATTCTAGTCGAAGCTCTTGGTCCGGCACCATTATTTTGGTCAGCCACCCTTCTAGTAACAATTGCTTGTAATCTTCCCTACATTGTCCACTTAGCCTTCCAAAGAAGTTTCAATCCAATGGATCATCATATCATCCAAGAAATCAAATACTACAAGAAAGATGTTGAGGATCAGCGCATGTGGAAGCGGGAGGCGTCTAAAGCAAGACAAGAAACCAAGATCGGGTTTACGGCTAGAGTGGATGCCAAGATCAGGCATTTGAGAGGGAAGCTGCAAAAGAAGCATACCCCTGTAAGTACACAAAGTCCGATGTCTCCGTTGTGA

Protein Analysis

1236

Amino Acids

139.33

Weight (kDa)

6.39

Isoelectric Point (pI)

39.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 165
AasI GACNNNNNNGTC 1 cut(s) 85
Acc36I ACCTGC 3 cut(s) 733, 1298, 1537
Acc65I GGTACC 2 cut(s) 3212, 3324
AccB1I GGYRCC 4 cut(s) 2206, 3212, 3324, 3409
AccI GTMKAC 1 cut(s) 1254
AccII CGCG 1 cut(s) 1447
AciI CCGC 3 cut(s) 1445, 1709, 3571
AclWI GGATC 9 cut(s) 516, 686, 950, 1480, 1527, 2155, 2468, 3513, 3561
AcoI YGGCCR 1 cut(s) 3184
AcyI GRCGYC 2 cut(s) 86, 3578
AfiI CCNNNNNNNGG 5 cut(s) 101, 1799, 2781, 3606, 3636
AflII CTTAAG 1 cut(s) 2243
AflIII ACRYGT 3 cut(s) 1182, 2358, 2946
AhdI GACNNNNNGTC 1 cut(s) 2388
AjnI CCWGG 3 cut(s) 760, 1248, 3165
AjuI GAANNNNNNNTTGG 4 cut(s) 1290, 1322, 2694, 2726
AlwI GGATC 9 cut(s) 516, 686, 950, 1480, 1527, 2155, 2468, 3513, 3561
Ama87I CYCGRG 1 cut(s) 1652
AoxI GGCC 7 cut(s) 461, 832, 1063, 1246, 2052, 3168, 3184
ApeKI GCWGC 8 cut(s) 275, 1367, 1370, 1724, 2483, 2589, 3203, 3655
ArsI GACNNNNNNTTYG 2 cut(s) 1213, 1245
AseI ATTAAT 1 cut(s) 2495
Asp700I GAANNNNTTC 1 cut(s) 389
Asp718I GGTACC 2 cut(s) 3212, 3324
AspLEI GCGC 2 cut(s) 1014, 3561
AspS9I GGNCC 2 cut(s) 3059, 3404
AsuHPI GGTGA 8 cut(s) 283, 294, 605, 627, 832, 919, 1689, 2875
AsuII TTCGAA 1 cut(s) 785
AvaI CYCGRG 1 cut(s) 1652
AvaII GGWCC 2 cut(s) 3059, 3404
BaeGI GKGCMC 1 cut(s) 2211
BaeI ACNNNNGTAYC 2 cut(s) 3083, 3116
BalI TGGCCA 1 cut(s) 3186
BanI GGYRCC 4 cut(s) 2206, 3212, 3324, 3409
BanII GRGCYC 1 cut(s) 1593
BauI CACGAG 1 cut(s) 1000
BbsI GAAGAC 3 cut(s) 561, 983, 3009
BbvI GCAGC 8 cut(s) 262, 1379, 1382, 1736, 2495, 2576, 3190, 3642
BceAI ACGGC 3 cut(s) 2577, 3361, 3630
BcgI CGANNNNNNTGC 2 cut(s) 2045, 2079
BciT130I CCWGG 3 cut(s) 762, 1250, 3167
BciVI GTATCC 2 cut(s) 1800, 3084
BclI TGATCA 4 cut(s) 951, 1018, 2404, 2457
BfaI CTAG 7 cut(s) 1350, 1851, 2757, 3063, 3389, 3437, 3618
BfmI CTRYAG 1 cut(s) 522
BfrI CTTAAG 1 cut(s) 2243
BfuAI ACCTGC 3 cut(s) 733, 1298, 1537
BfuI GTATCC 2 cut(s) 1800, 3084
BglII AGATCT 1 cut(s) 2331
BisI GCNGC 9 cut(s) 276, 1368, 1371, 1710, 1725, 2484, 2590, 3204, 3656
BlsI GCNGC 9 cut(s) 277, 1369, 1372, 1711, 1726, 2485, 2591, 3205, 3657
BmcAI AGTACT 1 cut(s) 2060
Bme1390I CCNGG 3 cut(s) 762, 1250, 3167
Bme18I GGWCC 2 cut(s) 3059, 3404
BmeRI GACNNNNNGTC 1 cut(s) 2388
BmeT110I CYCGRG 1 cut(s) 1652
BmgT120I GGNCC 2 cut(s) 3059, 3404
BmiI GGNNCC 4 cut(s) 2208, 3214, 3326, 3411
BmrFI CCNGG 3 cut(s) 762, 1250, 3167
BmrI ACTGGG 3 cut(s) 1209, 2770, 3104
BmsI GCATC 4 cut(s) 1938, 2554, 2585, 3616
BmuI ACTGGG 3 cut(s) 1209, 2770, 3104
BpiI GAAGAC 3 cut(s) 561, 983, 3009
BplI GAGNNNNNCTC 2 cut(s) 2821, 2853
BpmI CTGGAG 2 cut(s) 1508, 3342
Bpu10I CCTNAGC 1 cut(s) 791
Bpu14I TTCGAA 1 cut(s) 785
BpuEI CTTGAG 6 cut(s) 100, 1197, 1295, 1415, 2066, 2147
BsaAI YACGTR 1 cut(s) 1683
BsaBI GATNNNNATC 1 cut(s) 1518
BsaHI GRCGYC 2 cut(s) 86, 3578
BsaI GGTCTC 2 cut(s) 356, 2885
BsaJI CCNNGG 5 cut(s) 100, 222, 464, 2809, 3021
BsaXI ACNNNNNCTCC 6 cut(s) 129, 159, 432, 462, 2042, 2072
Bsc4I CCNNNNNNNGG 5 cut(s) 101, 1799, 2781, 3606, 3636
Bse118I RCCGGY 1 cut(s) 1560
Bse3DI GCAATG 4 cut(s) 2080, 2975, 3115, 3324
Bse8I GATNNNNATC 1 cut(s) 1518
BseBI CCWGG 3 cut(s) 762, 1250, 3167
BseDI CCNNGG 5 cut(s) 100, 222, 464, 2809, 3021
BseGI GGATG 7 cut(s) 652, 1089, 1260, 2539, 3108, 3516, 3631
BseJI GATNNNNATC 1 cut(s) 1518
BseLI CCNNNNNNNGG 5 cut(s) 101, 1799, 2781, 3606, 3636
BseMI GCAATG 4 cut(s) 2080, 2975, 3115, 3324
BseMII CTCAG 4 cut(s) 367, 790, 805, 2852
BseRI GAGGAG 4 cut(s) 321, 764, 1253, 2063
BseSI GKGCMC 1 cut(s) 2211
BseXI GCAGC 8 cut(s) 262, 1379, 1382, 1736, 2495, 2576, 3190, 3642
BseYI CCCAGC 2 cut(s) 1592, 2009
Bsh1236I CGCG 1 cut(s) 1447
Bsh1285I CGRYCG 1 cut(s) 739
BshFI GGCC 7 cut(s) 463, 834, 1065, 1248, 2054, 3170, 3186
BshNI GGYRCC 4 cut(s) 2206, 3212, 3324, 3409
BsiEI CGRYCG 1 cut(s) 739
BsiHKCI CYCGRG 1 cut(s) 1652
BsiSI CCGG 3 cut(s) 31, 1561, 3407
BslFI GGGAC 2 cut(s) 1681, 2379
BslI CCNNNNNNNGG 5 cut(s) 101, 1799, 2781, 3606, 3636
BsmBI CGTCTC 2 cut(s) 93, 590
BsmFI GGGAC 2 cut(s) 1681, 2379
BsmI GAATGC 3 cut(s) 2127, 2903, 3379
BsnI GGCC 7 cut(s) 463, 834, 1065, 1248, 2054, 3170, 3186
Bso31I GGTCTC 2 cut(s) 356, 2885
BsoBI CYCGRG 1 cut(s) 1652
Bsp119I TTCGAA 1 cut(s) 785
Bsp1286I GDGCHC 2 cut(s) 1593, 2211
Bsp1407I TGTACA 1 cut(s) 1035
Bsp19I CCATGG 2 cut(s) 464, 2809
BspACI CCGC 3 cut(s) 1445, 1709, 3571
BspANI GGCC 7 cut(s) 463, 834, 1065, 1248, 2054, 3170, 3186
BspCNI CTCAG 4 cut(s) 366, 789, 804, 2851
BspFNI CGCG 1 cut(s) 1447
BspLI GGNNCC 4 cut(s) 2208, 3214, 3326, 3411
BspMAI CTGCAG 1 cut(s) 526
BspMI ACCTGC 3 cut(s) 733, 1298, 1537
BspPI GGATC 9 cut(s) 516, 686, 950, 1480, 1527, 2155, 2468, 3513, 3561
BspT104I TTCGAA 1 cut(s) 785
BspT107I GGYRCC 4 cut(s) 2206, 3212, 3324, 3409
BspTI CTTAAG 1 cut(s) 2243
BspTNI GGTCTC 2 cut(s) 356, 2885
BsrDI GCAATG 4 cut(s) 2080, 2975, 3115, 3324
BsrFI RCCGGY 1 cut(s) 1560
BsrGI TGTACA 1 cut(s) 1035
BssAI RCCGGY 1 cut(s) 1560
BssECI CCNNGG 5 cut(s) 100, 222, 464, 2809, 3021
BssNI GRCGYC 2 cut(s) 86, 3578
BssSI CACGAG 1 cut(s) 1000
BssT1I CCWWGG 4 cut(s) 100, 222, 464, 2809
Bst2BI CACGAG 1 cut(s) 1000
Bst2UI CCWGG 3 cut(s) 762, 1250, 3167
Bst4CI ACNGT 6 cut(s) 124, 173, 231, 1495, 2573, 3036
Bst6I CTCTTC 3 cut(s) 147, 1188, 2894
BstACI GRCGYC 2 cut(s) 86, 3578
BstAFI CTTAAG 1 cut(s) 2243
BstAPI GCANNNNNTGC 1 cut(s) 2489
BstAUI TGTACA 1 cut(s) 1035
BstBAI YACGTR 1 cut(s) 1683
BstBI TTCGAA 1 cut(s) 785
BstC8I GCNNGC 6 cut(s) 41, 1053, 1155, 1562, 2745, 3350
BstDEI CTNAG 6 cut(s) 353, 586, 776, 791, 2838, 3475
BstDSI CCRYGG 2 cut(s) 464, 2809
BstENI CCTNNNNNAGG 1 cut(s) 1797
BstF5I GGATG 7 cut(s) 652, 1089, 1260, 2539, 3108, 3516, 3631
BstFNI CGCG 1 cut(s) 1447
BstHHI GCGC 2 cut(s) 1014, 3561
BstMCI CGRYCG 1 cut(s) 739
BstMWI GCNNNNNNNGC 9 cut(s) 40, 368, 840, 963, 2489, 2753, 3200, 3584, 3664
BstNI CCWGG 3 cut(s) 762, 1250, 3167
BstNSI RCATGY 6 cut(s) 1186, 2304, 2483, 2950, 3352, 3565
BstSCI CCNGG 3 cut(s) 760, 1248, 3165
BstSFI CTRYAG 1 cut(s) 522
BstSLI GKGCMC 1 cut(s) 2211
BstSNI TACGTA 1 cut(s) 1683
BstUI CGCG 1 cut(s) 1447
BstV1I GCAGC 8 cut(s) 262, 1379, 1382, 1736, 2495, 2576, 3190, 3642
BstV2I GAAGAC 3 cut(s) 561, 983, 3009
BstX2I RGATCY 4 cut(s) 691, 942, 2331, 2473
BstXI CCANNNNNNTGG 2 cut(s) 1002, 3420
BstYI RGATCY 4 cut(s) 691, 942, 2331, 2473
BsuI GTATCC 2 cut(s) 1800, 3084
BsuRI GGCC 7 cut(s) 463, 834, 1065, 1248, 2054, 3170, 3186
BtgI CCRYGG 2 cut(s) 464, 2809
BtgZI GCGATG 1 cut(s) 2685
BtsCI GGATG 7 cut(s) 652, 1089, 1260, 2539, 3108, 3516, 3631
BtsI GCAGTG 2 cut(s) 669, 1641
BtsIMutI CAGTG 8 cut(s) 79, 227, 371, 669, 1641, 1815, 2615, 2731
BveI ACCTGC 3 cut(s) 733, 1298, 1537
Cac8I GCNNGC 6 cut(s) 41, 1053, 1155, 1562, 2745, 3350
CfoI GCGC 2 cut(s) 1014, 3561
Cfr10I RCCGGY 1 cut(s) 1560
Cfr13I GGNCC 2 cut(s) 3059, 3404
CseI GACGC 2 cut(s) 75, 3567
CsiI ACCWGGT 1 cut(s) 760
CspCI CAANNNNNGTGG 2 cut(s) 2163, 2198
DdeI CTNAG 6 cut(s) 353, 586, 776, 791, 2838, 3475
DrdI GACNNNNNNGTC 1 cut(s) 85
DriI GACNNNNNGTC 1 cut(s) 2388
DseDI GACNNNNNNGTC 1 cut(s) 85
EaeI YGGCCR 1 cut(s) 3184
Eam1104I CTCTTC 3 cut(s) 147, 1188, 2894
Eam1105I GACNNNNNGTC 1 cut(s) 2388
EarI CTCTTC 3 cut(s) 147, 1188, 2894
Eco105I TACGTA 1 cut(s) 1683
Eco130I CCWWGG 4 cut(s) 100, 222, 464, 2809
Eco147I AGGCCT 2 cut(s) 1065, 3170
Eco24I GRGCYC 1 cut(s) 1593
Eco31I GGTCTC 2 cut(s) 356, 2885
Eco32I GATATC 1 cut(s) 1103
Eco47I GGWCC 2 cut(s) 3059, 3404
Eco88I CYCGRG 1 cut(s) 1652
EcoNI CCTNNNNNAGG 1 cut(s) 1797
EcoO109I RGGNCCY 1 cut(s) 3059
EcoRII CCWGG 3 cut(s) 760, 1248, 3165
EcoRV GATATC 1 cut(s) 1103
EcoT14I CCWWGG 4 cut(s) 100, 222, 464, 2809
EcoT22I ATGCAT 1 cut(s) 2219
EcoT38I GRGCYC 1 cut(s) 1593
ErhI CCWWGG 4 cut(s) 100, 222, 464, 2809
Esp3I CGTCTC 2 cut(s) 93, 590
FalI AAGNNNNNCTT 8 cut(s) 1040, 1072, 1347, 1379, 1398, 1430, 2226, 2258
FaqI GGGAC 2 cut(s) 1681, 2379
FauI CCCGC 1 cut(s) 3564
FauNDI CATATG 1 cut(s) 2585
FbaI TGATCA 4 cut(s) 951, 1018, 2404, 2457
FblI GTMKAC 1 cut(s) 1254
Fnu4HI GCNGC 9 cut(s) 276, 1368, 1371, 1710, 1725, 2484, 2590, 3204, 3656
FokI GGATG 7 cut(s) 659, 1076, 1247, 2546, 3115, 3503, 3638
FriOI GRGCYC 1 cut(s) 1593
Fsp4HI GCNGC 9 cut(s) 276, 1368, 1371, 1710, 1725, 2484, 2590, 3204, 3656
FspBI CTAG 7 cut(s) 1350, 1851, 2757, 3063, 3389, 3437, 3618
GlaI GCGC 2 cut(s) 1013, 3560
GluI GCNGC 9 cut(s) 276, 1368, 1371, 1710, 1725, 2484, 2590, 3204, 3656
GsaI CCCAGC 2 cut(s) 1596, 2013
GsuI CTGGAG 2 cut(s) 1508, 3342
HaeIII GGCC 7 cut(s) 463, 834, 1065, 1248, 2054, 3170, 3186
HapII CCGG 3 cut(s) 31, 1561, 3407
HgaI GACGC 2 cut(s) 75, 3567
HhaI GCGC 2 cut(s) 1014, 3561
Hin1I GRCGYC 2 cut(s) 86, 3578
Hin6I GCGC 2 cut(s) 1012, 3559
HinP1I GCGC 2 cut(s) 1012, 3559
HincII GTYRAC 3 cut(s) 1287, 2569, 3247
HindII GTYRAC 3 cut(s) 1287, 2569, 3247
HinfI GANTC 9 cut(s) 105, 782, 998, 1204, 1694, 2431, 2721, 2997, 3286
HpaI GTTAAC 2 cut(s) 1287, 3247
HpaII CCGG 3 cut(s) 31, 1561, 3407
HphI GGTGA 8 cut(s) 283, 294, 605, 627, 832, 919, 1689, 2875
Hpy188III TCNNGA 7 cut(s) 117, 493, 728, 755, 793, 1652, 1800
HpyCH4III ACNGT 6 cut(s) 124, 173, 231, 1495, 2573, 3036
HpyCH4IV ACGT 5 cut(s) 212, 1283, 1682, 2096, 2360
HpyF10VI GCNNNNNNNGC 9 cut(s) 40, 368, 840, 963, 2489, 2753, 3200, 3584, 3664
HpyF3I CTNAG 6 cut(s) 353, 586, 776, 791, 2838, 3475
HpySE526I ACGT 5 cut(s) 212, 1283, 1682, 2096, 2360
Hsp92I GRCGYC 2 cut(s) 86, 3578
HspAI GCGC 2 cut(s) 1012, 3559
KpnI GGTACC 2 cut(s) 3216, 3328
KroI GCCGGC 1 cut(s) 1560
KroNI GCCGGC 1 cut(s) 1562
Ksp22I TGATCA 4 cut(s) 951, 1018, 2404, 2457
KspAI GTTAAC 2 cut(s) 1287, 3247
LmnI GCTCC 4 cut(s) 33, 334, 2070, 2316
Lsp1109I GCAGC 8 cut(s) 262, 1379, 1382, 1736, 2495, 2576, 3190, 3642
LweI GCATC 4 cut(s) 1938, 2554, 2585, 3616
MabI ACCWGGT 1 cut(s) 760
MaeI CTAG 7 cut(s) 1350, 1851, 2757, 3063, 3389, 3437, 3618
MaeII ACGT 5 cut(s) 212, 1283, 1682, 2096, 2360
MaeIII GTNAC 7 cut(s) 131, 628, 1078, 1498, 1695, 2620, 3439
MfeI CAATTG 2 cut(s) 2664, 3444
MflI RGATCY 4 cut(s) 691, 942, 2331, 2473
MhlI GDGCHC 2 cut(s) 1593, 2211
MlsI TGGCCA 1 cut(s) 3186
MluNI TGGCCA 1 cut(s) 3186
MlyI GAGTC 4 cut(s) 114, 992, 1703, 3006
MmeI TCCRAC 5 cut(s) 463, 2338, 2445, 2668, 2698
Mox20I TGGCCA 1 cut(s) 3186
Mph1103I ATGCAT 1 cut(s) 2219
MroNI GCCGGC 1 cut(s) 1560
MroXI GAANNNNTTC 1 cut(s) 389
MscI TGGCCA 1 cut(s) 3186
MseI TTAA 8 cut(s) 411, 1167, 1286, 1832, 2244, 2495, 2516, 3246
MslI CAYNNNNRTG 3 cut(s) 1181, 1185, 1992
Msp20I TGGCCA 1 cut(s) 3186
MspA1I CMGCKG 1 cut(s) 2180
MspCI CTTAAG 1 cut(s) 2243
MspI CCGG 3 cut(s) 31, 1561, 3407
MspR9I CCNGG 3 cut(s) 762, 1250, 3167
MunI CAATTG 2 cut(s) 2664, 3444
Mva1269I GAATGC 3 cut(s) 2127, 2903, 3379
MvaI CCWGG 3 cut(s) 762, 1250, 3167
MvnI CGCG 1 cut(s) 1447
MwoI GCNNNNNNNGC 9 cut(s) 40, 368, 840, 963, 2489, 2753, 3200, 3584, 3664
NaeI GCCGGC 1 cut(s) 1562
NcoI CCATGG 2 cut(s) 464, 2809
NdeI CATATG 1 cut(s) 2585
NgoMIV GCCGGC 1 cut(s) 1560
NlaIV GGNNCC 4 cut(s) 2208, 3214, 3326, 3411
NmeAIII GCCGAG 1 cut(s) 2080
NmuCI GTSAC 1 cut(s) 1695
NsiI ATGCAT 1 cut(s) 2219
NspI RCATGY 6 cut(s) 1186, 2304, 2483, 2950, 3352, 3565
NspV TTCGAA 1 cut(s) 785
PaeI GCATGC 1 cut(s) 3352
PceI AGGCCT 2 cut(s) 1065, 3170
PciI ACATGT 2 cut(s) 1182, 2946
PctI GAATGC 3 cut(s) 2127, 2903, 3379
PdiI GCCGGC 1 cut(s) 1562
PdmI GAANNNNTTC 1 cut(s) 389
PfeI GAWTC 5 cut(s) 782, 1204, 2431, 2721, 3286
PkrI GCNGC 9 cut(s) 277, 1369, 1372, 1711, 1726, 2485, 2591, 3205, 3657
Ple19I CGATCG 1 cut(s) 739
PleI GAGTC 4 cut(s) 113, 992, 1702, 3005
PpsI GAGTC 4 cut(s) 113, 992, 1702, 3005
Ppu21I YACGTR 1 cut(s) 1683
PpuMI RGGWCCY 1 cut(s) 3059
PscI ACATGT 2 cut(s) 1182, 2946
PshBI ATTAAT 1 cut(s) 2495
PsiI TTATAA 1 cut(s) 165
Psp5II RGGWCCY 1 cut(s) 3059
Psp6I CCWGG 3 cut(s) 760, 1248, 3165
PspFI CCCAGC 2 cut(s) 1592, 2009
PspGI CCWGG 3 cut(s) 760, 1248, 3165
PspN4I GGNNCC 4 cut(s) 2208, 3214, 3326, 3411
PspPI GGNCC 2 cut(s) 3059, 3404
PspPPI RGGWCCY 1 cut(s) 3059
PstI CTGCAG 1 cut(s) 526
PsuI RGATCY 4 cut(s) 691, 942, 2331, 2473
PvuI CGATCG 1 cut(s) 739
PvuII CAGCTG 1 cut(s) 2180
RseI CAYNNNNRTG 3 cut(s) 1181, 1185, 1992
SaqAI TTAA 8 cut(s) 411, 1167, 1286, 1832, 2244, 2495, 2516, 3246
SatI GCNGC 9 cut(s) 276, 1368, 1371, 1710, 1725, 2484, 2590, 3204, 3656
Sau96I GGNCC 2 cut(s) 3059, 3404
ScaI AGTACT 1 cut(s) 2060
SchI GAGTC 4 cut(s) 114, 992, 1703, 3006
ScrFI CCNGG 3 cut(s) 762, 1250, 3167
SduI GDGCHC 2 cut(s) 1593, 2211
SexAI ACCWGGT 1 cut(s) 760
SfaNI GCATC 4 cut(s) 1938, 2554, 2585, 3616
SfcI CTRYAG 1 cut(s) 522
SfuI TTCGAA 1 cut(s) 785
SinI GGWCC 2 cut(s) 3059, 3404
SmiMI CAYNNNNRTG 3 cut(s) 1181, 1185, 1992
SmlI CTYRAG 7 cut(s) 115, 1212, 1310, 1394, 2045, 2126, 2243
SmoI CTYRAG 7 cut(s) 115, 1212, 1310, 1394, 2045, 2126, 2243
SnaBI TACGTA 1 cut(s) 1683
SphI GCATGC 1 cut(s) 3352
SseBI AGGCCT 2 cut(s) 1065, 3170
SsiI CCGC 3 cut(s) 1445, 1709, 3571
SspI AATATT 3 cut(s) 910, 1626, 2869
SspMI CTAG 7 cut(s) 1350, 1851, 2757, 3063, 3389, 3437, 3618
StuI AGGCCT 2 cut(s) 1065, 3170
StyD4I CCNGG 3 cut(s) 760, 1248, 3165
StyI CCWWGG 4 cut(s) 100, 222, 464, 2809
TaaI ACNGT 6 cut(s) 124, 173, 231, 1495, 2573, 3036
TaiI ACGT 5 cut(s) 215, 1286, 1685, 2099, 2363
TaqI TCGA 8 cut(s) 756, 785, 1130, 1766, 1942, 2355, 3078, 3393
TatI WGTACW 4 cut(s) 1035, 1821, 2058, 3680
TauI GCSGC 1 cut(s) 1712
TfiI GAWTC 5 cut(s) 782, 1204, 2431, 2721, 3286
Tru1I TTAA 8 cut(s) 411, 1167, 1286, 1832, 2244, 2495, 2516, 3246
Tru9I TTAA 8 cut(s) 411, 1167, 1286, 1832, 2244, 2495, 2516, 3246
TscAI CASTG 8 cut(s) 79, 234, 378, 676, 1648, 1815, 2622, 2731
TseFI GTSAC 1 cut(s) 1695
TseI GCWGC 8 cut(s) 275, 1367, 1370, 1724, 2483, 2589, 3203, 3655
Tsp45I GTSAC 1 cut(s) 1695
TspGWI ACGGA 5 cut(s) 573, 1234, 1334, 3164, 3690
TspRI CASTG 8 cut(s) 79, 234, 378, 676, 1648, 1815, 2622, 2731
Vha464I CTTAAG 1 cut(s) 2243
VpaK11BI GGWCC 2 cut(s) 3059, 3404
VspI ATTAAT 1 cut(s) 2495
XagI CCTNNNNNAGG 1 cut(s) 1797
XceI RCATGY 6 cut(s) 1186, 2304, 2483, 2950, 3352, 3565
XmiI GTMKAC 1 cut(s) 1254
XmnI GAANNNNTTC 1 cut(s) 389
XspI CTAG 7 cut(s) 1350, 1851, 2757, 3063, 3389, 3437, 3618
ZrmI AGTACT 1 cut(s) 2060
Zsp2I ATGCAT 1 cut(s) 2219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.