chromatin binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72390 AT1G72390 |
| fragaria_vesca | FvH4_6g35180 FvH4_6g35180 FvH4_6g35180 FvH4_6g35180 |
| malus_domestica | MD09G1178000.v1.1 MD17G1148700.v1.1 |
| prunus_persica | Prupe.3G037300_v2.0.a1 |
| pyrus_communis | pycom09g09640 pycom17g14200 pycom17g14240 |
| rosa_chinensis | RchiOBHm_Chr2g0146441 |
| rosa_laevigata | RLG00000020201 |
| rosa_multiflora | Rmu_sc0001986.1_g000006 Rmu_sc0014617.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00100090 |
| rosa_rugosa | Rorug02G0394400 Rorug02G0394400 Rorug02G0394500 |
| rosa_samantha | Rh2AG451200 Rh2BG463700 Rh2CG438000 Rh2DG472700 |
| rosa_wichuraiana | Rw2G036830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 947, 997 |
| AatII | GACGTC | 1 cut(s) | 332 |
| Acc65I | GGTACC | 1 cut(s) | 32 |
| AccB1I | GGYRCC | 3 cut(s) | 32, 1364, 2495 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 866, 1703, 2291 |
| AccII | CGCG | 1 cut(s) | 2713 |
| AciI | CCGC | 7 cut(s) | 468, 511, 604, 1166, 2711, 2992, 3047 |
| AclI | AACGTT | 1 cut(s) | 75 |
| AcoI | YGGCCR | 2 cut(s) | 868, 1239 |
| AcuI | CTGAAG | 4 cut(s) | 210, 1851, 1941, 2729 |
| AcyI | GRCGYC | 2 cut(s) | 329, 1365 |
| AfaI | GTAC | 7 cut(s) | 34, 404, 2296, 2421, 2937, 3503, 3672 |
| AflII | CTTAAG | 1 cut(s) | 916 |
| AflIII | ACRYGT | 2 cut(s) | 93, 3324 |
| AgeI | ACCGGT | 2 cut(s) | 29, 3932 |
| AjiI | CACGTC | 1 cut(s) | 94 |
| AjnI | CCWGG | 9 cut(s) | 35, 370, 1287, 1538, 1818, 2054, 2661, 3105, 3382 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 95, 127 |
| Alw21I | GWGCWC | 4 cut(s) | 1413, 3695, 3797, 3863 |
| Alw26I | GTCTC | 6 cut(s) | 25, 206, 1117, 1379, 2102, 2682 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 215, 3389, 3418, 3553 |
| Ama87I | CYCGRG | 1 cut(s) | 2482 |
| AoxI | GGCC | 5 cut(s) | 464, 868, 1175, 1239, 2664 |
| ApaI | GGGCCC | 1 cut(s) | 468 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2185, 2217 |
| AsiGI | ACCGGT | 2 cut(s) | 29, 3932 |
| Asp718I | GGTACC | 1 cut(s) | 32 |
| AspLEI | GCGC | 3 cut(s) | 1367, 2080, 3280 |
| AspS9I | GGNCC | 9 cut(s) | 464, 465, 508, 1131, 1175, 1694, 3334, 3470, 3907 |
| AsuC2I | CCSGG | 4 cut(s) | 1621, 2483, 2484, 2652 |
| AsuHPI | GGTGA | 6 cut(s) | 593, 1095, 2342, 3186, 3648, 3700 |
| AsuII | TTCGAA | 1 cut(s) | 2111 |
| AvaI | CYCGRG | 1 cut(s) | 2482 |
| AvaII | GGWCC | 6 cut(s) | 508, 1131, 1694, 3334, 3470, 3907 |
| AxyI | CCTNAGG | 1 cut(s) | 2250 |
| BaeGI | GKGCMC | 1 cut(s) | 468 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2286, 2319 |
| BalI | TGGCCA | 2 cut(s) | 870, 1241 |
| BamHI | GGATCC | 3 cut(s) | 488, 640, 1886 |
| BanI | GGYRCC | 3 cut(s) | 32, 1364, 2495 |
| BanII | GRGCYC | 8 cut(s) | 198, 468, 1306, 1413, 2150, 3695, 3797, 3863 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2946, 2978 |
| BauI | CACGAG | 1 cut(s) | 2635 |
| Bbv12I | GWGCWC | 4 cut(s) | 1413, 3695, 3797, 3863 |
| BbvCI | CCTCAGC | 3 cut(s) | 2346, 2820, 3636 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 89, 123, 2626, 2660 |
| BciT130I | CCWGG | 9 cut(s) | 37, 372, 1289, 1540, 1820, 2056, 2663, 3107, 3384 |
| BclI | TGATCA | 1 cut(s) | 882 |
| BcnI | CCSGG | 4 cut(s) | 1621, 2483, 2484, 2652 |
| BcoDI | GTCTC | 6 cut(s) | 25, 206, 1117, 1379, 2102, 2682 |
| BfaI | CTAG | 2 cut(s) | 3264, 3747 |
| BfmI | CTRYAG | 8 cut(s) | 207, 1179, 1338, 1668, 1689, 2520, 2864, 3662 |
| BfoI | RGCGCY | 1 cut(s) | 1368 |
| BfrI | CTTAAG | 1 cut(s) | 916 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1724 |
| BglII | AGATCT | 2 cut(s) | 920, 1517 |
| BlpI | GCTNAGC | 3 cut(s) | 1756, 3791, 3857 |
| Bme18I | GGWCC | 6 cut(s) | 508, 1131, 1694, 3334, 3470, 3907 |
| BmeT110I | CYCGRG | 1 cut(s) | 2482 |
| BmgBI | CACGTC | 1 cut(s) | 94 |
| BmgT120I | GGNCC | 9 cut(s) | 464, 465, 508, 1131, 1175, 1694, 3334, 3470, 3907 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1129 |
| BpmI | CTGGAG | 3 cut(s) | 393, 2038, 2715 |
| Bpu10I | CCTNAGC | 4 cut(s) | 2346, 2820, 3636, 3796 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 1756, 3791, 3857 |
| Bpu14I | TTCGAA | 1 cut(s) | 2111 |
| BpuEI | CTTGAG | 2 cut(s) | 916, 2664 |
| BpuMI | CCSGG | 4 cut(s) | 1621, 2483, 2484, 2652 |
| BsaAI | YACGTR | 1 cut(s) | 2510 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1028, 2430 |
| BsaHI | GRCGYC | 2 cut(s) | 329, 1365 |
| BsaI | GGTCTC | 3 cut(s) | 25, 1117, 1379 |
| BsaWI | WCCGGW | 3 cut(s) | 29, 1388, 3932 |
| Bse118I | RCCGGY | 5 cut(s) | 29, 1760, 2498, 3821, 3932 |
| Bse1I | ACTGG | 7 cut(s) | 471, 531, 708, 1214, 1687, 1788, 1896 |
| Bse21I | CCTNAGG | 1 cut(s) | 2250 |
| Bse3DI | GCAATG | 6 cut(s) | 909, 1878, 2363, 2966, 3148, 3888 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1028, 2430 |
| BseBI | CCWGG | 9 cut(s) | 37, 372, 1289, 1540, 1820, 2056, 2663, 3107, 3384 |
| BseJI | GATNNNNATC | 2 cut(s) | 1028, 2430 |
| BseMI | GCAATG | 6 cut(s) | 909, 1878, 2363, 2966, 3148, 3888 |
| BseNI | ACTGG | 7 cut(s) | 471, 531, 708, 1214, 1687, 1788, 1896 |
| BseRI | GAGGAG | 5 cut(s) | 45, 103, 188, 3096, 3192 |
| BseSI | GKGCMC | 1 cut(s) | 468 |
| BseYI | CCCAGC | 8 cut(s) | 161, 952, 1319, 1631, 2231, 2630, 2859, 3406 |
| BsgI | GTGCAG | 2 cut(s) | 296, 3557 |
| Bsh1236I | CGCG | 1 cut(s) | 2713 |
| BshFI | GGCC | 5 cut(s) | 466, 870, 1177, 1241, 2666 |
| BshNI | GGYRCC | 3 cut(s) | 32, 1364, 2495 |
| BshTI | ACCGGT | 2 cut(s) | 29, 3932 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1413, 3695, 3797, 3863 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2482 |
| BsmAI | GTCTC | 6 cut(s) | 25, 206, 1117, 1379, 2102, 2682 |
| BsmI | GAATGC | 4 cut(s) | 289, 1504, 2917, 3250 |
| BsnI | GGCC | 5 cut(s) | 466, 870, 1177, 1241, 2666 |
| Bso31I | GGTCTC | 3 cut(s) | 25, 1117, 1379 |
| BsoBI | CYCGRG | 1 cut(s) | 2482 |
| Bsp119I | TTCGAA | 1 cut(s) | 2111 |
| Bsp120I | GGGCCC | 1 cut(s) | 464 |
| Bsp1286I | GDGCHC | 8 cut(s) | 198, 468, 1306, 1413, 2150, 3695, 3797, 3863 |
| Bsp1407I | TGTACA | 1 cut(s) | 3501 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 1756, 3791, 3857 |
| Bsp19I | CCATGG | 4 cut(s) | 865, 2311, 3147, 3903 |
| BspACI | CCGC | 7 cut(s) | 468, 511, 604, 1166, 2711, 2992, 3047 |
| BspANI | GGCC | 5 cut(s) | 466, 870, 1177, 1241, 2666 |
| BspFNI | CGCG | 1 cut(s) | 2713 |
| BspHI | TCATGA | 2 cut(s) | 1512, 3813 |
| BspMAI | CTGCAG | 4 cut(s) | 211, 1672, 2524, 2868 |
| BspT104I | TTCGAA | 1 cut(s) | 2111 |
| BspT107I | GGYRCC | 3 cut(s) | 32, 1364, 2495 |
| BspTI | CTTAAG | 1 cut(s) | 916 |
| BspTNI | GGTCTC | 3 cut(s) | 25, 1117, 1379 |
| BsrDI | GCAATG | 6 cut(s) | 909, 1878, 2363, 2966, 3148, 3888 |
| BsrFI | RCCGGY | 5 cut(s) | 29, 1760, 2498, 3821, 3932 |
| BsrGI | TGTACA | 1 cut(s) | 3501 |
| BsrI | ACTGG | 7 cut(s) | 471, 531, 708, 1214, 1687, 1788, 1896 |
| BssAI | RCCGGY | 5 cut(s) | 29, 1760, 2498, 3821, 3932 |
| BssNI | GRCGYC | 2 cut(s) | 329, 1365 |
| BssSI | CACGAG | 1 cut(s) | 2635 |
| BssT1I | CCWWGG | 5 cut(s) | 865, 1368, 2311, 3147, 3903 |
| Bst2BI | CACGAG | 1 cut(s) | 2635 |
| Bst2UI | CCWGG | 9 cut(s) | 37, 372, 1289, 1540, 1820, 2056, 2663, 3107, 3384 |
| Bst4CI | ACNGT | 8 cut(s) | 751, 1332, 1380, 1473, 2299, 2673, 2940, 3454 |
| Bst6I | CTCTTC | 2 cut(s) | 245, 347 |
| BstACI | GRCGYC | 2 cut(s) | 329, 1365 |
| BstAFI | CTTAAG | 1 cut(s) | 916 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 2803, 3553, 3592, 3604, 3616 |
| BstAUI | TGTACA | 1 cut(s) | 3501 |
| BstBAI | YACGTR | 1 cut(s) | 2510 |
| BstBI | TTCGAA | 1 cut(s) | 2111 |
| BstC8I | GCNNGC | 8 cut(s) | 468, 1973, 2394, 2883, 3261, 3282, 3744, 3847 |
| BstDSI | CCRYGG | 4 cut(s) | 865, 2311, 3147, 3903 |
| BstFNI | CGCG | 1 cut(s) | 2713 |
| BstH2I | RGCGCY | 1 cut(s) | 1368 |
| BstHHI | GCGC | 3 cut(s) | 1367, 2080, 3280 |
| BstMAI | GTCTC | 6 cut(s) | 25, 206, 1117, 1379, 2102, 2682 |
| BstNI | CCWGG | 9 cut(s) | 37, 372, 1289, 1540, 1820, 2056, 2663, 3107, 3384 |
| BstNSI | RCATGY | 4 cut(s) | 1975, 2473, 3328, 3812 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1129 |
| BstSFI | CTRYAG | 8 cut(s) | 207, 1179, 1338, 1668, 1689, 2520, 2864, 3662 |
| BstSLI | GKGCMC | 1 cut(s) | 468 |
| BstUI | CGCG | 1 cut(s) | 2713 |
| BstX2I | RGATCY | 6 cut(s) | 488, 640, 920, 1517, 1886, 3386 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3154 |
| BstYI | RGATCY | 6 cut(s) | 488, 640, 920, 1517, 1886, 3386 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2250 |
| BsuRI | GGCC | 5 cut(s) | 466, 870, 1177, 1241, 2666 |
| BtgI | CCRYGG | 4 cut(s) | 865, 2311, 3147, 3903 |
| BtrI | CACGTC | 1 cut(s) | 94 |
| BtsI | GCAGTG | 1 cut(s) | 2007 |
| BtsIMutI | CAGTG | 6 cut(s) | 524, 1420, 1795, 1903, 2007, 3459 |
| Cac8I | GCNNGC | 8 cut(s) | 468, 1973, 2394, 2883, 3261, 3282, 3744, 3847 |
| CaiI | CAGNNNCTG | 4 cut(s) | 215, 3389, 3418, 3553 |
| CciI | TCATGA | 2 cut(s) | 1512, 3813 |
| CfoI | GCGC | 3 cut(s) | 1367, 2080, 3280 |
| Cfr10I | RCCGGY | 5 cut(s) | 29, 1760, 2498, 3821, 3932 |
| Cfr13I | GGNCC | 9 cut(s) | 464, 465, 508, 1131, 1175, 1694, 3334, 3470, 3907 |
| Cfr9I | CCCGGG | 1 cut(s) | 2482 |
| CseI | GACGC | 1 cut(s) | 2702 |
| CsiI | ACCWGGT | 1 cut(s) | 35 |
| Csp6I | GTAC | 7 cut(s) | 33, 403, 2295, 2420, 2936, 3502, 3671 |
| CspAI | ACCGGT | 2 cut(s) | 29, 3932 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 673, 708, 1123, 1158, 3462, 3497 |
| CviQI | GTAC | 7 cut(s) | 33, 403, 2295, 2420, 2936, 3502, 3671 |
| DinI | GGCGCC | 1 cut(s) | 1366 |
| DraI | TTTAAA | 2 cut(s) | 234, 2128 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 947, 997 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 947, 997 |
| EaeI | YGGCCR | 2 cut(s) | 868, 1239 |
| Eam1104I | CTCTTC | 2 cut(s) | 245, 347 |
| EarI | CTCTTC | 2 cut(s) | 245, 347 |
| EciI | GGCGGA | 1 cut(s) | 500 |
| Ecl136II | GAGCTC | 4 cut(s) | 1411, 3693, 3795, 3861 |
| Eco130I | CCWWGG | 5 cut(s) | 865, 1368, 2311, 3147, 3903 |
| Eco147I | AGGCCT | 1 cut(s) | 2666 |
| Eco24I | GRGCYC | 8 cut(s) | 198, 468, 1306, 1413, 2150, 3695, 3797, 3863 |
| Eco31I | GGTCTC | 3 cut(s) | 25, 1117, 1379 |
| Eco32I | GATATC | 2 cut(s) | 547, 2432 |
| Eco47I | GGWCC | 6 cut(s) | 508, 1131, 1694, 3334, 3470, 3907 |
| Eco53kI | GAGCTC | 4 cut(s) | 1411, 3693, 3795, 3861 |
| Eco57I | CTGAAG | 4 cut(s) | 210, 1851, 1941, 2729 |
| Eco81I | CCTNAGG | 1 cut(s) | 2250 |
| Eco88I | CYCGRG | 1 cut(s) | 2482 |
| EcoICRI | GAGCTC | 4 cut(s) | 1411, 3693, 3795, 3861 |
| EcoO109I | RGGNCCY | 3 cut(s) | 464, 1175, 3334 |
| EcoRI | GAATTC | 1 cut(s) | 2926 |
| EcoRII | CCWGG | 9 cut(s) | 35, 370, 1287, 1538, 1818, 2054, 2661, 3105, 3382 |
| EcoRV | GATATC | 2 cut(s) | 547, 2432 |
| EcoT14I | CCWWGG | 5 cut(s) | 865, 1368, 2311, 3147, 3903 |
| EcoT22I | ATGCAT | 5 cut(s) | 2602, 3250, 3381, 3810, 3943 |
| EcoT38I | GRGCYC | 8 cut(s) | 198, 468, 1306, 1413, 2150, 3695, 3797, 3863 |
| EgeI | GGCGCC | 1 cut(s) | 1366 |
| EheI | GGCGCC | 1 cut(s) | 1366 |
| ErhI | CCWWGG | 5 cut(s) | 865, 1368, 2311, 3147, 3903 |
| FauI | CCCGC | 3 cut(s) | 475, 611, 1173 |
| FbaI | TGATCA | 1 cut(s) | 882 |
| FriOI | GRGCYC | 8 cut(s) | 198, 468, 1306, 1413, 2150, 3695, 3797, 3863 |
| FspBI | CTAG | 2 cut(s) | 3264, 3747 |
| GlaI | GCGC | 3 cut(s) | 1366, 2079, 3279 |
| GsaI | CCCAGC | 8 cut(s) | 165, 956, 1323, 1635, 2235, 2634, 2863, 3410 |
| GsuI | CTGGAG | 3 cut(s) | 393, 2038, 2715 |
| HaeII | RGCGCY | 1 cut(s) | 1368 |
| HaeIII | GGCC | 5 cut(s) | 466, 870, 1177, 1241, 2666 |
| HgaI | GACGC | 1 cut(s) | 2702 |
| HhaI | GCGC | 3 cut(s) | 1367, 2080, 3280 |
| Hin1I | GRCGYC | 2 cut(s) | 329, 1365 |
| Hin6I | GCGC | 3 cut(s) | 1365, 2078, 3278 |
| HinP1I | GCGC | 3 cut(s) | 1365, 2078, 3278 |
| HincII | GTYRAC | 1 cut(s) | 2561 |
| HindII | GTYRAC | 1 cut(s) | 2561 |
| HindIII | AAGCTT | 3 cut(s) | 615, 689, 2960 |
| HphI | GGTGA | 6 cut(s) | 593, 1095, 2342, 3186, 3648, 3700 |
| Hpy166II | GTNNAC | 8 cut(s) | 476, 1134, 2561, 2717, 2956, 3473, 3752, 3785 |
| Hpy8I | GTNNAC | 8 cut(s) | 476, 1134, 2561, 2717, 2956, 3473, 3752, 3785 |
| Hpy99I | CGWCG | 1 cut(s) | 944 |
| HpyAV | CCTTC | 8 cut(s) | 185, 235, 1292, 1394, 1439, 1729, 1865, 3920 |
| HpyCH4III | ACNGT | 8 cut(s) | 751, 1332, 1380, 1473, 2299, 2673, 2940, 3454 |
| HpyCH4IV | ACGT | 6 cut(s) | 75, 93, 329, 942, 2509, 2934 |
| HpySE526I | ACGT | 6 cut(s) | 75, 93, 329, 942, 2509, 2934 |
| Hsp92I | GRCGYC | 2 cut(s) | 329, 1365 |
| HspAI | GCGC | 3 cut(s) | 1365, 2078, 3278 |
| KasI | GGCGCC | 1 cut(s) | 1364 |
| KflI | GGGWCCC | 1 cut(s) | 3334 |
| KpnI | GGTACC | 1 cut(s) | 36 |
| Ksp22I | TGATCA | 1 cut(s) | 882 |
| MabI | ACCWGGT | 1 cut(s) | 35 |
| MaeI | CTAG | 2 cut(s) | 3264, 3747 |
| MaeII | ACGT | 6 cut(s) | 75, 93, 329, 942, 2509, 2934 |
| MaeIII | GTNAC | 6 cut(s) | 522, 745, 751, 1048, 2002, 2945 |
| MfeI | CAATTG | 5 cut(s) | 351, 2801, 2906, 2916, 3590 |
| MflI | RGATCY | 6 cut(s) | 488, 640, 920, 1517, 1886, 3386 |
| MhlI | GDGCHC | 8 cut(s) | 198, 468, 1306, 1413, 2150, 3695, 3797, 3863 |
| MlsI | TGGCCA | 2 cut(s) | 870, 1241 |
| MluNI | TGGCCA | 2 cut(s) | 870, 1241 |
| Mly113I | GGCGCC | 1 cut(s) | 1365 |
| MlyI | GAGTC | 7 cut(s) | 608, 831, 985, 1264, 1793, 3409, 3790 |
| MmeI | TCCRAC | 5 cut(s) | 90, 994, 1864, 1924, 2955 |
| Mox20I | TGGCCA | 2 cut(s) | 870, 1241 |
| Mph1103I | ATGCAT | 5 cut(s) | 2602, 3250, 3381, 3810, 3943 |
| MscI | TGGCCA | 2 cut(s) | 870, 1241 |
| MslI | CAYNNNNRTG | 5 cut(s) | 294, 870, 1089, 2639, 3152 |
| Msp20I | TGGCCA | 2 cut(s) | 870, 1241 |
| MspA1I | CMGCKG | 9 cut(s) | 1961, 2725, 2863, 2888, 2992, 3553, 3571, 3790, 3856 |
| MspCI | CTTAAG | 1 cut(s) | 916 |
| MunI | CAATTG | 5 cut(s) | 351, 2801, 2906, 2916, 3590 |
| Mva1269I | GAATGC | 4 cut(s) | 289, 1504, 2917, 3250 |
| MvaI | CCWGG | 9 cut(s) | 37, 372, 1289, 1540, 1820, 2056, 2663, 3107, 3384 |
| MvnI | CGCG | 1 cut(s) | 2713 |
| NarI | GGCGCC | 1 cut(s) | 1365 |
| NciI | CCSGG | 4 cut(s) | 1621, 2483, 2484, 2652 |
| NcoI | CCATGG | 4 cut(s) | 865, 2311, 3147, 3903 |
| NmeAIII | GCCGAG | 1 cut(s) | 326 |
| NmuCI | GTSAC | 2 cut(s) | 522, 2002 |
| NsiI | ATGCAT | 5 cut(s) | 2602, 3250, 3381, 3810, 3943 |
| NspI | RCATGY | 4 cut(s) | 1975, 2473, 3328, 3812 |
| NspV | TTCGAA | 1 cut(s) | 2111 |
| PaeI | GCATGC | 1 cut(s) | 1975 |
| PagI | TCATGA | 2 cut(s) | 1512, 3813 |
| PasI | CCCWGGG | 1 cut(s) | 3106 |
| PceI | AGGCCT | 1 cut(s) | 2666 |
| PciI | ACATGT | 1 cut(s) | 3324 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 439 |
| PctI | GAATGC | 4 cut(s) | 289, 1504, 2917, 3250 |
| PfeI | GAWTC | 8 cut(s) | 356, 673, 830, 1309, 2135, 2729, 2842, 3436 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 866, 1703, 2291 |
| PfoI | TCCNGGA | 3 cut(s) | 1538, 2054, 3382 |
| PinAI | ACCGGT | 2 cut(s) | 29, 3932 |
| PleI | GAGTC | 7 cut(s) | 607, 831, 985, 1264, 1793, 3409, 3789 |
| PluTI | GGCGCC | 1 cut(s) | 1368 |
| PpsI | GAGTC | 7 cut(s) | 607, 831, 985, 1264, 1793, 3409, 3789 |
| Ppu21I | YACGTR | 1 cut(s) | 2510 |
| PpuMI | RGGWCCY | 1 cut(s) | 3334 |
| PscI | ACATGT | 1 cut(s) | 3324 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1129 |
| Psp124BI | GAGCTC | 4 cut(s) | 1413, 3695, 3797, 3863 |
| Psp1406I | AACGTT | 1 cut(s) | 75 |
| Psp5II | RGGWCCY | 1 cut(s) | 3334 |
| Psp6I | CCWGG | 9 cut(s) | 35, 370, 1287, 1538, 1818, 2054, 2661, 3105, 3382 |
| PspFI | CCCAGC | 8 cut(s) | 161, 952, 1319, 1631, 2231, 2630, 2859, 3406 |
| PspGI | CCWGG | 9 cut(s) | 35, 370, 1287, 1538, 1818, 2054, 2661, 3105, 3382 |
| PspOMI | GGGCCC | 1 cut(s) | 464 |
| PspPI | GGNCC | 9 cut(s) | 464, 465, 508, 1131, 1175, 1694, 3334, 3470, 3907 |
| PspPPI | RGGWCCY | 1 cut(s) | 3334 |
| PstI | CTGCAG | 4 cut(s) | 211, 1672, 2524, 2868 |
| PstNI | CAGNNNCTG | 4 cut(s) | 215, 3389, 3418, 3553 |
| PsuI | RGATCY | 6 cut(s) | 488, 640, 920, 1517, 1886, 3386 |
| PvuII | CAGCTG | 8 cut(s) | 1961, 2725, 2863, 2888, 3553, 3571, 3790, 3856 |
| RsaI | GTAC | 7 cut(s) | 34, 404, 2296, 2421, 2937, 3503, 3672 |
| RsaNI | GTAC | 7 cut(s) | 33, 403, 2295, 2420, 2936, 3502, 3671 |
| RseI | CAYNNNNRTG | 5 cut(s) | 294, 870, 1089, 2639, 3152 |
| SacI | GAGCTC | 4 cut(s) | 1413, 3695, 3797, 3863 |
| Sau96I | GGNCC | 9 cut(s) | 464, 465, 508, 1131, 1175, 1694, 3334, 3470, 3907 |
| SchI | GAGTC | 7 cut(s) | 608, 831, 985, 1264, 1793, 3409, 3790 |
| SduI | GDGCHC | 8 cut(s) | 198, 468, 1306, 1413, 2150, 3695, 3797, 3863 |
| SexAI | ACCWGGT | 1 cut(s) | 35 |
| SfcI | CTRYAG | 8 cut(s) | 207, 1179, 1338, 1668, 1689, 2520, 2864, 3662 |
| SfoI | GGCGCC | 1 cut(s) | 1366 |
| SfuI | TTCGAA | 1 cut(s) | 2111 |
| SinI | GGWCC | 6 cut(s) | 508, 1131, 1694, 3334, 3470, 3907 |
| SmaI | CCCGGG | 1 cut(s) | 2484 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 294, 870, 1089, 2639, 3152 |
| SmlI | CTYRAG | 3 cut(s) | 895, 916, 2679 |
| SmoI | CTYRAG | 3 cut(s) | 895, 916, 2679 |
| SphI | GCATGC | 1 cut(s) | 1975 |
| SseBI | AGGCCT | 1 cut(s) | 2666 |
| SsiI | CCGC | 7 cut(s) | 468, 511, 604, 1166, 2711, 2992, 3047 |
| SspDI | GGCGCC | 1 cut(s) | 1364 |
| SspI | AATATT | 2 cut(s) | 1561, 1909 |
| SspMI | CTAG | 2 cut(s) | 3264, 3747 |
| SstI | GAGCTC | 4 cut(s) | 1413, 3695, 3797, 3863 |
| StuI | AGGCCT | 1 cut(s) | 2666 |
| StyI | CCWWGG | 5 cut(s) | 865, 1368, 2311, 3147, 3903 |
| TaaI | ACNGT | 8 cut(s) | 751, 1332, 1380, 1473, 2299, 2673, 2940, 3454 |
| TaiI | ACGT | 6 cut(s) | 78, 96, 332, 945, 2512, 2937 |
| TaqI | TCGA | 3 cut(s) | 433, 2111, 2156 |
| TaqII | GACCGA | 1 cut(s) | 1141 |
| TatI | WGTACW | 3 cut(s) | 402, 3501, 3670 |
| TauI | GCSGC | 2 cut(s) | 2995, 3049 |
| TfiI | GAWTC | 8 cut(s) | 356, 673, 830, 1309, 2135, 2729, 2842, 3436 |
| TscAI | CASTG | 6 cut(s) | 531, 1420, 1795, 1903, 2007, 3459 |
| TseFI | GTSAC | 2 cut(s) | 522, 2002 |
| Tsp45I | GTSAC | 2 cut(s) | 522, 2002 |
| TspGWI | ACGGA | 4 cut(s) | 32, 1209, 1855, 2692 |
| TspMI | CCCGGG | 1 cut(s) | 2482 |
| TspRI | CASTG | 6 cut(s) | 531, 1420, 1795, 1903, 2007, 3459 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 866, 1703, 2291 |
| Vha464I | CTTAAG | 1 cut(s) | 916 |
| VpaK11BI | GGWCC | 6 cut(s) | 508, 1131, 1694, 3334, 3470, 3907 |
| XceI | RCATGY | 4 cut(s) | 1975, 2473, 3328, 3812 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2377 |
| XmaI | CCCGGG | 1 cut(s) | 2482 |
| XspI | CTAG | 2 cut(s) | 3264, 3747 |
| ZraI | GACGTC | 1 cut(s) | 330 |
| Zsp2I | ATGCAT | 5 cut(s) | 2602, 3250, 3381, 3810, 3943 |