chromatin binding
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72390 AT1G72390 |
| fragaria_vesca | FvH4_6g35180 FvH4_6g35180 FvH4_6g35180 FvH4_6g35180 |
| malus_domestica | MD09G1178000.v1.1 MD17G1148700.v1.1 |
| prunus_persica | Prupe.3G037300_v2.0.a1 |
| pyrus_communis | pycom09g09640 pycom17g14200 pycom17g14240 |
| rosa_chinensis | RchiOBHm_Chr2g0146441 |
| rosa_laevigata | RLG00000020201 |
| rosa_multiflora | Rmu_sc0001986.1_g000006 Rmu_sc0014617.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00100090 |
| rosa_rugosa | Rorug02G0394400 Rorug02G0394400 Rorug02G0394500 |
| rosa_samantha | Rh2AG451200 Rh2BG463700 Rh2CG438000 Rh2DG472700 |
| rosa_wichuraiana | Rw2G036830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 3212 |
| Acc65I | GGTACC | 2 cut(s) | 209, 1259 |
| AccB1I | GGYRCC | 4 cut(s) | 209, 1259, 1574, 1744 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2510 |
| AccI | GTMKAC | 1 cut(s) | 883 |
| AccII | CGCG | 2 cut(s) | 1073, 2938 |
| AclI | AACGTT | 1 cut(s) | 252 |
| AclWI | GGATC | 9 cut(s) | 183, 654, 667, 806, 1195, 1414, 1722, 2113, 3664 |
| AcoI | YGGCCR | 5 cut(s) | 123, 136, 156, 179, 2112 |
| AcuI | CTGAAG | 3 cut(s) | 333, 381, 2954 |
| AcyI | GRCGYC | 2 cut(s) | 1028, 3209 |
| AfaI | GTAC | 8 cut(s) | 211, 575, 1261, 2515, 2528, 2640, 3219, 3266 |
| AflII | CTTAAG | 1 cut(s) | 1087 |
| AflIII | ACRYGT | 1 cut(s) | 267 |
| AgeI | ACCGGT | 1 cut(s) | 4190 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1199 |
| AjiI | CACGTC | 1 cut(s) | 268 |
| AleI | CACNNNNGTG | 1 cut(s) | 592 |
| Alw21I | GWGCWC | 5 cut(s) | 1623, 1973, 3953, 4055, 4121 |
| AlwI | GGATC | 9 cut(s) | 183, 654, 667, 806, 1195, 1414, 1722, 2113, 3664 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 386, 1196, 1352, 1979, 3691 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1574, 1606 |
| AseI | ATTAAT | 1 cut(s) | 2811 |
| AsiGI | ACCGGT | 1 cut(s) | 4190 |
| Asp718I | GGTACC | 2 cut(s) | 209, 1259 |
| AspLEI | GCGC | 1 cut(s) | 1073 |
| AsuC2I | CCSGG | 2 cut(s) | 183, 1831 |
| AsuHPI | GGTGA | 4 cut(s) | 764, 1305, 3906, 3958 |
| AsuII | TTCGAA | 1 cut(s) | 2330 |
| AsuNHI | GCTAGC | 1 cut(s) | 4004 |
| AxyI | CCTNAGG | 1 cut(s) | 2469 |
| BaeGI | GKGCMC | 1 cut(s) | 1516 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1243, 1276 |
| BalI | TGGCCA | 1 cut(s) | 125 |
| BamHI | GGATCC | 1 cut(s) | 659 |
| BanI | GGYRCC | 4 cut(s) | 209, 1259, 1574, 1744 |
| BanII | GRGCYC | 7 cut(s) | 1623, 1973, 2369, 2913, 3953, 4055, 4121 |
| Bbv12I | GWGCWC | 5 cut(s) | 1623, 1973, 3953, 4055, 4121 |
| BbvCI | CCTCAGC | 4 cut(s) | 1345, 2086, 3102, 3894 |
| BceAI | ACGGC | 4 cut(s) | 59, 151, 1525, 3911 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 263, 297, 463, 497 |
| BciVI | GTATCC | 1 cut(s) | 1469 |
| BclI | TGATCA | 2 cut(s) | 1053, 2487 |
| BcnI | CCSGG | 2 cut(s) | 183, 1831 |
| BfaI | CTAG | 4 cut(s) | 809, 2274, 2558, 4005 |
| BfmI | CTRYAG | 7 cut(s) | 378, 1389, 1548, 1899, 2517, 2742, 3920 |
| BfrI | CTTAAG | 1 cut(s) | 1087 |
| BfuI | GTATCC | 1 cut(s) | 1469 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1940 |
| BglII | AGATCT | 1 cut(s) | 1091 |
| BlpI | GCTNAGC | 2 cut(s) | 4049, 4115 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1199 |
| BmgBI | CACGTC | 1 cut(s) | 268 |
| BmtI | GCTAGC | 1 cut(s) | 4008 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1339 |
| BpmI | CTGGAG | 3 cut(s) | 290, 564, 3131 |
| Bpu10I | CCTNAGC | 5 cut(s) | 1345, 2086, 3102, 3894, 4054 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 4049, 4115 |
| Bpu14I | TTCGAA | 1 cut(s) | 2330 |
| BpuEI | CTTGAG | 1 cut(s) | 2889 |
| BpuMI | CCSGG | 2 cut(s) | 183, 1831 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1238 |
| BsaHI | GRCGYC | 2 cut(s) | 1028, 3209 |
| BsaI | GGTCTC | 4 cut(s) | 136, 202, 239, 1327 |
| BsaWI | WCCGGW | 2 cut(s) | 13, 4190 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 736, 766, 1787, 1817 |
| Bse118I | RCCGGY | 2 cut(s) | 4079, 4190 |
| Bse21I | CCTNAGG | 1 cut(s) | 2469 |
| Bse3DI | GCAATG | 6 cut(s) | 1371, 1971, 2097, 2529, 3248, 3729 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1238 |
| BseJI | GATNNNNATC | 1 cut(s) | 1238 |
| BseMI | GCAATG | 6 cut(s) | 1371, 1971, 2097, 2529, 3248, 3729 |
| BseRI | GAGGAG | 4 cut(s) | 122, 222, 277, 3459 |
| BseSI | GKGCMC | 1 cut(s) | 1516 |
| BseX3I | CGGCCG | 3 cut(s) | 136, 156, 179 |
| BseYI | CCCAGC | 3 cut(s) | 1841, 3141, 3679 |
| BsgI | GTGCAG | 3 cut(s) | 23, 467, 3905 |
| Bsh1236I | CGCG | 2 cut(s) | 1073, 2938 |
| Bsh1285I | CGRYCG | 4 cut(s) | 18, 139, 159, 182 |
| BshNI | GGYRCC | 4 cut(s) | 209, 1259, 1574, 1744 |
| BshTI | ACCGGT | 1 cut(s) | 4190 |
| BsiEI | CGRYCG | 4 cut(s) | 18, 139, 159, 182 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1623, 1973, 3953, 4055, 4121 |
| BsiSI | CCGG | 8 cut(s) | 14, 139, 159, 182, 1831, 2111, 4080, 4191 |
| BslFI | GGGAC | 8 cut(s) | 107, 207, 1174, 1546, 1812, 2139, 3382, 3590 |
| BsmBI | CGTCTC | 1 cut(s) | 55 |
| BsmFI | GGGAC | 8 cut(s) | 107, 207, 1174, 1546, 1812, 2139, 3382, 3590 |
| BsmI | GAATGC | 5 cut(s) | 460, 1714, 3199, 3517, 3532 |
| Bso31I | GGTCTC | 4 cut(s) | 136, 202, 239, 1327 |
| Bsp119I | TTCGAA | 1 cut(s) | 2330 |
| Bsp1286I | GDGCHC | 8 cut(s) | 1516, 1623, 1973, 2369, 2913, 3953, 4055, 4121 |
| Bsp1407I | TGTACA | 1 cut(s) | 3217 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 4049, 4115 |
| Bsp19I | CCATGG | 3 cut(s) | 1183, 2530, 3414 |
| BspFNI | CGCG | 2 cut(s) | 1073, 2938 |
| BspHI | TCATGA | 1 cut(s) | 1722 |
| BspMAI | CTGCAG | 1 cut(s) | 382 |
| BspOI | GCTAGC | 1 cut(s) | 4008 |
| BspPI | GGATC | 9 cut(s) | 183, 654, 667, 806, 1195, 1414, 1722, 2113, 3664 |
| BspT104I | TTCGAA | 1 cut(s) | 2330 |
| BspT107I | GGYRCC | 4 cut(s) | 209, 1259, 1574, 1744 |
| BspTI | CTTAAG | 1 cut(s) | 1087 |
| BspTNI | GGTCTC | 4 cut(s) | 136, 202, 239, 1327 |
| BsrDI | GCAATG | 6 cut(s) | 1371, 1971, 2097, 2529, 3248, 3729 |
| BsrFI | RCCGGY | 2 cut(s) | 4079, 4190 |
| BsrGI | TGTACA | 1 cut(s) | 3217 |
| BssAI | RCCGGY | 2 cut(s) | 4079, 4190 |
| BssNAI | GTATAC | 1 cut(s) | 884 |
| BssNI | GRCGYC | 2 cut(s) | 1028, 3209 |
| BssT1I | CCWWGG | 6 cut(s) | 1036, 1183, 1578, 1759, 2530, 3414 |
| Bst1107I | GTATAC | 1 cut(s) | 884 |
| Bst6I | CTCTTC | 2 cut(s) | 416, 518 |
| BstACI | GRCGYC | 2 cut(s) | 1028, 3209 |
| BstAFI | CTTAAG | 1 cut(s) | 1087 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 3085, 3826, 3853, 3883 |
| BstAUI | TGTACA | 1 cut(s) | 3217 |
| BstBI | TTCGAA | 1 cut(s) | 2330 |
| BstDSI | CCRYGG | 3 cut(s) | 1183, 2530, 3414 |
| BstFNI | CGCG | 2 cut(s) | 1073, 2938 |
| BstHHI | GCGC | 1 cut(s) | 1073 |
| BstMCI | CGRYCG | 4 cut(s) | 18, 139, 159, 182 |
| BstNSI | RCATGY | 3 cut(s) | 2194, 2695, 3598 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1339 |
| BstSFI | CTRYAG | 7 cut(s) | 378, 1389, 1548, 1899, 2517, 2742, 3920 |
| BstSLI | GKGCMC | 1 cut(s) | 1516 |
| BstUI | CGCG | 2 cut(s) | 1073, 2938 |
| BstX2I | RGATCY | 6 cut(s) | 659, 811, 1091, 1727, 2105, 3656 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3421 |
| BstYI | RGATCY | 6 cut(s) | 659, 811, 1091, 1727, 2105, 3656 |
| BstZ17I | GTATAC | 1 cut(s) | 884 |
| BstZI | CGGCCG | 3 cut(s) | 136, 156, 179 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2469 |
| BsuI | GTATCC | 1 cut(s) | 1469 |
| BtgI | CCRYGG | 3 cut(s) | 1183, 2530, 3414 |
| BtgZI | GCGATG | 2 cut(s) | 1066, 4132 |
| BtrI | CACGTC | 1 cut(s) | 268 |
| BtsIMutI | CAGTG | 7 cut(s) | 695, 1514, 1630, 1824, 2014, 2122, 2630 |
| CaiI | CAGNNNCTG | 5 cut(s) | 386, 1196, 1352, 1979, 3691 |
| CciI | TCATGA | 1 cut(s) | 1722 |
| CfoI | GCGC | 1 cut(s) | 1073 |
| Cfr10I | RCCGGY | 2 cut(s) | 4079, 4190 |
| CseI | GACGC | 3 cut(s) | 1036, 2777, 2927 |
| CsiI | ACCWGGT | 1 cut(s) | 212 |
| Csp6I | GTAC | 8 cut(s) | 210, 574, 1260, 2514, 2527, 2639, 3218, 3265 |
| CspAI | ACCGGT | 1 cut(s) | 4190 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 844, 879 |
| CviQI | GTAC | 8 cut(s) | 210, 574, 1260, 2514, 2527, 2639, 3218, 3265 |
| DraI | TTTAAA | 2 cut(s) | 2347, 2424 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1199 |
| EaeI | YGGCCR | 5 cut(s) | 123, 136, 156, 179, 2112 |
| EagI | CGGCCG | 3 cut(s) | 136, 156, 179 |
| Eam1104I | CTCTTC | 2 cut(s) | 416, 518 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1199 |
| EarI | CTCTTC | 2 cut(s) | 416, 518 |
| EciI | GGCGGA | 2 cut(s) | 636, 671 |
| Ecl136II | GAGCTC | 5 cut(s) | 1621, 1971, 3951, 4053, 4119 |
| EclXI | CGGCCG | 3 cut(s) | 136, 156, 179 |
| Eco130I | CCWWGG | 6 cut(s) | 1036, 1183, 1578, 1759, 2530, 3414 |
| Eco147I | AGGCCT | 1 cut(s) | 2891 |
| Eco24I | GRGCYC | 7 cut(s) | 1623, 1973, 2369, 2913, 3953, 4055, 4121 |
| Eco31I | GGTCTC | 4 cut(s) | 136, 202, 239, 1327 |
| Eco32I | GATATC | 1 cut(s) | 718 |
| Eco52I | CGGCCG | 3 cut(s) | 136, 156, 179 |
| Eco53kI | GAGCTC | 5 cut(s) | 1621, 1971, 3951, 4053, 4119 |
| Eco57I | CTGAAG | 3 cut(s) | 333, 381, 2954 |
| Eco81I | CCTNAGG | 1 cut(s) | 2469 |
| EcoICRI | GAGCTC | 5 cut(s) | 1621, 1971, 3951, 4053, 4119 |
| EcoO109I | RGGNCCY | 7 cut(s) | 1193, 1341, 1385, 1904, 3369, 3604, 3728 |
| EcoRI | GAATTC | 1 cut(s) | 3910 |
| EcoRV | GATATC | 1 cut(s) | 718 |
| EcoT14I | CCWWGG | 6 cut(s) | 1036, 1183, 1578, 1759, 2530, 3414 |
| EcoT22I | ATGCAT | 2 cut(s) | 2827, 3651 |
| EcoT38I | GRGCYC | 7 cut(s) | 1623, 1973, 2369, 2913, 3953, 4055, 4121 |
| ErhI | CCWWGG | 6 cut(s) | 1036, 1183, 1578, 1759, 2530, 3414 |
| Esp3I | CGTCTC | 1 cut(s) | 55 |
| FaqI | GGGAC | 8 cut(s) | 107, 207, 1174, 1546, 1812, 2139, 3382, 3590 |
| FauI | CCCGC | 2 cut(s) | 1686, 2696 |
| FauNDI | CATATG | 1 cut(s) | 490 |
| FbaI | TGATCA | 2 cut(s) | 1053, 2487 |
| FblI | GTMKAC | 1 cut(s) | 883 |
| FriOI | GRGCYC | 7 cut(s) | 1623, 1973, 2369, 2913, 3953, 4055, 4121 |
| FspBI | CTAG | 4 cut(s) | 809, 2274, 2558, 4005 |
| GlaI | GCGC | 1 cut(s) | 1072 |
| GsaI | CCCAGC | 3 cut(s) | 1845, 3145, 3683 |
| GsuI | CTGGAG | 3 cut(s) | 290, 564, 3131 |
| HapII | CCGG | 8 cut(s) | 14, 139, 159, 182, 1831, 2111, 4080, 4191 |
| HgaI | GACGC | 3 cut(s) | 1036, 2777, 2927 |
| HhaI | GCGC | 1 cut(s) | 1073 |
| Hin1I | GRCGYC | 2 cut(s) | 1028, 3209 |
| Hin6I | GCGC | 1 cut(s) | 1071 |
| HinP1I | GCGC | 1 cut(s) | 1071 |
| HindIII | AAGCTT | 3 cut(s) | 786, 860, 1487 |
| HpaII | CCGG | 8 cut(s) | 14, 139, 159, 182, 1831, 2111, 4080, 4191 |
| HphI | GGTGA | 4 cut(s) | 764, 1305, 3906, 3958 |
| Hpy166II | GTNNAC | 7 cut(s) | 884, 1226, 2630, 2942, 3265, 3740, 4043 |
| Hpy8I | GTNNAC | 7 cut(s) | 884, 1226, 2630, 2942, 3265, 3740, 4043 |
| Hpy99I | CGWCG | 1 cut(s) | 3214 |
| HpyAV | CCTTC | 7 cut(s) | 406, 706, 1502, 1604, 1649, 1945, 4178 |
| HpyCH4IV | ACGT | 5 cut(s) | 252, 267, 401, 2582, 3209 |
| HpySE526I | ACGT | 5 cut(s) | 252, 267, 401, 2582, 3209 |
| Hsp92I | GRCGYC | 2 cut(s) | 1028, 3209 |
| HspAI | GCGC | 1 cut(s) | 1071 |
| KflI | GGGWCCC | 2 cut(s) | 3369, 3604 |
| KpnI | GGTACC | 2 cut(s) | 213, 1263 |
| Ksp22I | TGATCA | 2 cut(s) | 1053, 2487 |
| LmnI | GCTCC | 9 cut(s) | 309, 1922, 2434, 3150, 3350, 3425, 3446, 3635, 3956 |
| MabI | ACCWGGT | 1 cut(s) | 212 |
| MaeI | CTAG | 4 cut(s) | 809, 2274, 2558, 4005 |
| MaeII | ACGT | 5 cut(s) | 252, 267, 401, 2582, 3209 |
| MaeIII | GTNAC | 6 cut(s) | 693, 916, 922, 1311, 1975, 2221 |
| MfeI | CAATTG | 5 cut(s) | 429, 522, 3188, 3198, 3857 |
| MflI | RGATCY | 6 cut(s) | 659, 811, 1091, 1727, 2105, 3656 |
| MhlI | GDGCHC | 8 cut(s) | 1516, 1623, 1973, 2369, 2913, 3953, 4055, 4121 |
| MlsI | TGGCCA | 1 cut(s) | 125 |
| MluNI | TGGCCA | 1 cut(s) | 125 |
| MlyI | GAGTC | 6 cut(s) | 362, 779, 1156, 1926, 3682, 4048 |
| MmeI | TCCRAC | 7 cut(s) | 153, 807, 872, 1900, 2083, 2143, 2698 |
| Mox20I | TGGCCA | 1 cut(s) | 125 |
| Mph1103I | ATGCAT | 2 cut(s) | 2827, 3651 |
| MscI | TGGCCA | 1 cut(s) | 125 |
| MseI | TTAA | 8 cut(s) | 404, 1088, 1632, 2141, 2346, 2423, 2811, 2832 |
| MslI | CAYNNNNRTG | 6 cut(s) | 465, 489, 592, 1299, 2864, 3419 |
| Msp20I | TGGCCA | 1 cut(s) | 125 |
| MspA1I | CMGCKG | 6 cut(s) | 1352, 1880, 2950, 3170, 4048, 4114 |
| MspCI | CTTAAG | 1 cut(s) | 1087 |
| MspI | CCGG | 8 cut(s) | 14, 139, 159, 182, 1831, 2111, 4080, 4191 |
| MunI | CAATTG | 5 cut(s) | 429, 522, 3188, 3198, 3857 |
| Mva1269I | GAATGC | 5 cut(s) | 460, 1714, 3199, 3517, 3532 |
| MvnI | CGCG | 2 cut(s) | 1073, 2938 |
| NciI | CCSGG | 2 cut(s) | 183, 1831 |
| NcoI | CCATGG | 3 cut(s) | 1183, 2530, 3414 |
| NdeI | CATATG | 1 cut(s) | 490 |
| NheI | GCTAGC | 1 cut(s) | 4004 |
| NmeAIII | GCCGAG | 1 cut(s) | 497 |
| NmuCI | GTSAC | 3 cut(s) | 693, 1311, 2221 |
| NsiI | ATGCAT | 2 cut(s) | 2827, 3651 |
| NspI | RCATGY | 3 cut(s) | 2194, 2695, 3598 |
| NspV | TTCGAA | 1 cut(s) | 2330 |
| OliI | CACNNNNGTG | 1 cut(s) | 592 |
| PaeI | GCATGC | 1 cut(s) | 2194 |
| PagI | TCATGA | 1 cut(s) | 1722 |
| PasI | CCCWGGG | 1 cut(s) | 3373 |
| PceI | AGGCCT | 1 cut(s) | 2891 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 110, 258, 610 |
| PctI | GAATGC | 5 cut(s) | 460, 1714, 3199, 3517, 3532 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2510 |
| PfoI | TCCNGGA | 2 cut(s) | 1279, 3652 |
| PinAI | ACCGGT | 1 cut(s) | 4190 |
| PleI | GAGTC | 6 cut(s) | 361, 778, 1156, 1925, 3682, 4047 |
| PpsI | GAGTC | 6 cut(s) | 361, 778, 1156, 1925, 3682, 4047 |
| PpuMI | RGGWCCY | 5 cut(s) | 1193, 1341, 1904, 3369, 3604 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1339 |
| PshBI | ATTAAT | 1 cut(s) | 2811 |
| Psp124BI | GAGCTC | 5 cut(s) | 1623, 1973, 3953, 4055, 4121 |
| Psp1406I | AACGTT | 1 cut(s) | 252 |
| Psp5II | RGGWCCY | 5 cut(s) | 1193, 1341, 1904, 3369, 3604 |
| PspFI | CCCAGC | 3 cut(s) | 1841, 3141, 3679 |
| PspPPI | RGGWCCY | 5 cut(s) | 1193, 1341, 1904, 3369, 3604 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 328, 360 |
| PstI | CTGCAG | 1 cut(s) | 382 |
| PstNI | CAGNNNCTG | 5 cut(s) | 386, 1196, 1352, 1979, 3691 |
| PsuI | RGATCY | 6 cut(s) | 659, 811, 1091, 1727, 2105, 3656 |
| PvuII | CAGCTG | 5 cut(s) | 1352, 2950, 3170, 4048, 4114 |
| RsaI | GTAC | 8 cut(s) | 211, 575, 1261, 2515, 2528, 2640, 3219, 3266 |
| RsaNI | GTAC | 8 cut(s) | 210, 574, 1260, 2514, 2527, 2639, 3218, 3265 |
| RseI | CAYNNNNRTG | 6 cut(s) | 465, 489, 592, 1299, 2864, 3419 |
| SacI | GAGCTC | 5 cut(s) | 1623, 1973, 3953, 4055, 4121 |
| SaqAI | TTAA | 8 cut(s) | 404, 1088, 1632, 2141, 2346, 2423, 2811, 2832 |
| SchI | GAGTC | 6 cut(s) | 362, 779, 1156, 1926, 3682, 4048 |
| SduI | GDGCHC | 8 cut(s) | 1516, 1623, 1973, 2369, 2913, 3953, 4055, 4121 |
| SexAI | ACCWGGT | 1 cut(s) | 212 |
| SfcI | CTRYAG | 7 cut(s) | 378, 1389, 1548, 1899, 2517, 2742, 3920 |
| SfuI | TTCGAA | 1 cut(s) | 2330 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 465, 489, 592, 1299, 2864, 3419 |
| SmlI | CTYRAG | 2 cut(s) | 1087, 2904 |
| SmoI | CTYRAG | 2 cut(s) | 1087, 2904 |
| SphI | GCATGC | 1 cut(s) | 2194 |
| SseBI | AGGCCT | 1 cut(s) | 2891 |
| SspI | AATATT | 2 cut(s) | 1771, 3772 |
| SspMI | CTAG | 4 cut(s) | 809, 2274, 2558, 4005 |
| SstI | GAGCTC | 5 cut(s) | 1623, 1973, 3953, 4055, 4121 |
| StuI | AGGCCT | 1 cut(s) | 2891 |
| StyI | CCWWGG | 6 cut(s) | 1036, 1183, 1578, 1759, 2530, 3414 |
| TaiI | ACGT | 5 cut(s) | 255, 270, 404, 2585, 3212 |
| TaqI | TCGA | 5 cut(s) | 604, 2066, 2330, 2375, 3212 |
| TaqII | GACCGA | 1 cut(s) | 1351 |
| TatI | WGTACW | 2 cut(s) | 573, 3217 |
| TauI | GCSGC | 2 cut(s) | 151, 641 |
| Tru1I | TTAA | 8 cut(s) | 404, 1088, 1632, 2141, 2346, 2423, 2811, 2832 |
| Tru9I | TTAA | 8 cut(s) | 404, 1088, 1632, 2141, 2346, 2423, 2811, 2832 |
| TscAI | CASTG | 7 cut(s) | 702, 1521, 1630, 1824, 2014, 2122, 2637 |
| TseFI | GTSAC | 3 cut(s) | 693, 1311, 2221 |
| Tsp45I | GTSAC | 3 cut(s) | 693, 1311, 2221 |
| TspGWI | ACGGA | 7 cut(s) | 79, 119, 209, 672, 901, 2074, 2259 |
| TspRI | CASTG | 7 cut(s) | 702, 1521, 1630, 1824, 2014, 2122, 2637 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2510 |
| Vha464I | CTTAAG | 1 cut(s) | 1087 |
| VspI | ATTAAT | 1 cut(s) | 2811 |
| XbaI | TCTAGA | 1 cut(s) | 808 |
| XceI | RCATGY | 3 cut(s) | 2194, 2695, 3598 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 823, 2596 |
| XmiI | GTMKAC | 1 cut(s) | 883 |
| XspI | CTAG | 4 cut(s) | 809, 2274, 2558, 4005 |
| ZraI | GACGTC | 1 cut(s) | 3210 |
| Zsp2I | ATGCAT | 2 cut(s) | 2827, 3651 |