chromatin binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72390 AT1G72390 |
| fragaria_vesca | FvH4_6g35180 FvH4_6g35180 FvH4_6g35180 FvH4_6g35180 |
| malus_domestica | MD09G1178000.v1.1 MD17G1148700.v1.1 |
| prunus_persica | Prupe.3G037300_v2.0.a1 |
| pyrus_communis | pycom09g09640 pycom17g14200 pycom17g14240 |
| rosa_chinensis | RchiOBHm_Chr2g0146441 |
| rosa_laevigata | RLG00000020201 |
| rosa_multiflora | Rmu_sc0001986.1_g000006 Rmu_sc0014617.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00100090 |
| rosa_rugosa | Rorug02G0394400 Rorug02G0394400 Rorug02G0394500 |
| rosa_samantha | Rh2AG451200 Rh2BG463700 Rh2CG438000 Rh2DG472700 |
| rosa_wichuraiana | Rw2G036830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 3035 |
| Acc65I | GGTACC | 2 cut(s) | 32, 1082 |
| AccB1I | GGYRCC | 4 cut(s) | 32, 1082, 1397, 1567 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2333 |
| AccI | GTMKAC | 1 cut(s) | 706 |
| AccII | CGCG | 2 cut(s) | 896, 2761 |
| AclI | AACGTT | 1 cut(s) | 75 |
| AclWI | GGATC | 8 cut(s) | 477, 490, 629, 1018, 1237, 1545, 1936, 3481 |
| AcoI | YGGCCR | 1 cut(s) | 1935 |
| AcuI | CTGAAG | 3 cut(s) | 156, 204, 2777 |
| AcyI | GRCGYC | 2 cut(s) | 851, 3032 |
| AfaI | GTAC | 8 cut(s) | 34, 398, 1084, 2338, 2351, 2463, 3042, 3089 |
| AflII | CTTAAG | 1 cut(s) | 910 |
| AflIII | ACRYGT | 1 cut(s) | 90 |
| AgeI | ACCGGT | 1 cut(s) | 4010 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1022 |
| AjiI | CACGTC | 1 cut(s) | 91 |
| AleI | CACNNNNGTG | 1 cut(s) | 415 |
| Alw21I | GWGCWC | 5 cut(s) | 1446, 1796, 3773, 3875, 3941 |
| Alw26I | GTCTC | 9 cut(s) | 25, 62, 200, 600, 1150, 1412, 1686, 2144, 2730 |
| AlwI | GGATC | 8 cut(s) | 477, 490, 629, 1018, 1237, 1545, 1936, 3481 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 209, 1019, 1175, 1802, 3508 |
| AseI | ATTAAT | 1 cut(s) | 2634 |
| AsiGI | ACCGGT | 1 cut(s) | 4010 |
| Asp718I | GGTACC | 2 cut(s) | 32, 1082 |
| AspLEI | GCGC | 1 cut(s) | 896 |
| AsuC2I | CCSGG | 1 cut(s) | 1654 |
| AsuHPI | GGTGA | 4 cut(s) | 587, 1128, 3726, 3778 |
| AsuII | TTCGAA | 1 cut(s) | 2153 |
| AsuNHI | GCTAGC | 1 cut(s) | 3824 |
| AvaII | GGWCC | 9 cut(s) | 502, 1003, 1016, 1164, 1727, 3186, 3421, 3554, 3985 |
| AxyI | CCTNAGG | 1 cut(s) | 2292 |
| BaeGI | GKGCMC | 1 cut(s) | 1339 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1066, 1099 |
| BamHI | GGATCC | 1 cut(s) | 482 |
| BanI | GGYRCC | 4 cut(s) | 32, 1082, 1397, 1567 |
| BanII | GRGCYC | 7 cut(s) | 1446, 1796, 2192, 2736, 3773, 3875, 3941 |
| Bbv12I | GWGCWC | 5 cut(s) | 1446, 1796, 3773, 3875, 3941 |
| BbvCI | CCTCAGC | 4 cut(s) | 1168, 1909, 2925, 3714 |
| BceAI | ACGGC | 2 cut(s) | 1348, 3731 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 86, 120, 286, 320 |
| BciVI | GTATCC | 1 cut(s) | 1292 |
| BclI | TGATCA | 2 cut(s) | 876, 2310 |
| BcnI | CCSGG | 1 cut(s) | 1654 |
| BcoDI | GTCTC | 9 cut(s) | 25, 62, 200, 600, 1150, 1412, 1686, 2144, 2730 |
| BfaI | CTAG | 4 cut(s) | 632, 2097, 2381, 3825 |
| BfmI | CTRYAG | 7 cut(s) | 201, 1212, 1371, 1722, 2340, 2565, 3740 |
| BfrI | CTTAAG | 1 cut(s) | 910 |
| BfuI | GTATCC | 1 cut(s) | 1292 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1763 |
| BglII | AGATCT | 1 cut(s) | 914 |
| BlpI | GCTNAGC | 2 cut(s) | 3869, 3935 |
| Bme18I | GGWCC | 9 cut(s) | 502, 1003, 1016, 1164, 1727, 3186, 3421, 3554, 3985 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1022 |
| BmgBI | CACGTC | 1 cut(s) | 91 |
| BmtI | GCTAGC | 1 cut(s) | 3828 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1162 |
| BpmI | CTGGAG | 3 cut(s) | 113, 387, 2954 |
| Bpu10I | CCTNAGC | 5 cut(s) | 1168, 1909, 2925, 3714, 3874 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 3869, 3935 |
| Bpu14I | TTCGAA | 1 cut(s) | 2153 |
| BpuEI | CTTGAG | 1 cut(s) | 2712 |
| BpuMI | CCSGG | 1 cut(s) | 1654 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1061 |
| BsaHI | GRCGYC | 2 cut(s) | 851, 3032 |
| BsaI | GGTCTC | 3 cut(s) | 25, 62, 1150 |
| BsaWI | WCCGGW | 1 cut(s) | 4010 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 559, 589, 1610, 1640 |
| Bse118I | RCCGGY | 2 cut(s) | 3899, 4010 |
| Bse21I | CCTNAGG | 1 cut(s) | 2292 |
| Bse3DI | GCAATG | 7 cut(s) | 1194, 1794, 1920, 2352, 2405, 3071, 3546 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1061 |
| BseJI | GATNNNNATC | 1 cut(s) | 1061 |
| BseMI | GCAATG | 7 cut(s) | 1194, 1794, 1920, 2352, 2405, 3071, 3546 |
| BseRI | GAGGAG | 3 cut(s) | 45, 100, 3276 |
| BseSI | GKGCMC | 1 cut(s) | 1339 |
| BseYI | CCCAGC | 3 cut(s) | 1664, 2964, 3496 |
| BsgI | GTGCAG | 2 cut(s) | 290, 3725 |
| Bsh1236I | CGCG | 2 cut(s) | 896, 2761 |
| BshNI | GGYRCC | 4 cut(s) | 32, 1082, 1397, 1567 |
| BshTI | ACCGGT | 1 cut(s) | 4010 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1446, 1796, 3773, 3875, 3941 |
| BsiSI | CCGG | 4 cut(s) | 1654, 1934, 3900, 4011 |
| BslFI | GGGAC | 8 cut(s) | 30, 660, 997, 1369, 1635, 1962, 3199, 3407 |
| BsmAI | GTCTC | 9 cut(s) | 25, 62, 200, 600, 1150, 1412, 1686, 2144, 2730 |
| BsmFI | GGGAC | 8 cut(s) | 30, 660, 997, 1369, 1635, 1962, 3199, 3407 |
| BsmI | GAATGC | 5 cut(s) | 283, 1537, 3022, 3334, 3349 |
| Bso31I | GGTCTC | 3 cut(s) | 25, 62, 1150 |
| Bsp119I | TTCGAA | 1 cut(s) | 2153 |
| Bsp1286I | GDGCHC | 8 cut(s) | 1339, 1446, 1796, 2192, 2736, 3773, 3875, 3941 |
| Bsp1407I | TGTACA | 1 cut(s) | 3040 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 3869, 3935 |
| Bsp19I | CCATGG | 3 cut(s) | 1006, 2353, 3231 |
| BspFNI | CGCG | 2 cut(s) | 896, 2761 |
| BspHI | TCATGA | 1 cut(s) | 1545 |
| BspMAI | CTGCAG | 2 cut(s) | 205, 2569 |
| BspOI | GCTAGC | 1 cut(s) | 3828 |
| BspPI | GGATC | 8 cut(s) | 477, 490, 629, 1018, 1237, 1545, 1936, 3481 |
| BspT104I | TTCGAA | 1 cut(s) | 2153 |
| BspT107I | GGYRCC | 4 cut(s) | 32, 1082, 1397, 1567 |
| BspTI | CTTAAG | 1 cut(s) | 910 |
| BspTNI | GGTCTC | 3 cut(s) | 25, 62, 1150 |
| BsrDI | GCAATG | 7 cut(s) | 1194, 1794, 1920, 2352, 2405, 3071, 3546 |
| BsrFI | RCCGGY | 2 cut(s) | 3899, 4010 |
| BsrGI | TGTACA | 1 cut(s) | 3040 |
| BssAI | RCCGGY | 2 cut(s) | 3899, 4010 |
| BssNAI | GTATAC | 1 cut(s) | 707 |
| BssNI | GRCGYC | 2 cut(s) | 851, 3032 |
| BssT1I | CCWWGG | 6 cut(s) | 859, 1006, 1401, 1582, 2353, 3231 |
| Bst1107I | GTATAC | 1 cut(s) | 707 |
| Bst4CI | ACNGT | 9 cut(s) | 32, 264, 745, 1380, 1675, 2341, 2445, 2610, 3045 |
| Bst6I | CTCTTC | 2 cut(s) | 239, 341 |
| BstACI | GRCGYC | 2 cut(s) | 851, 3032 |
| BstAFI | CTTAAG | 1 cut(s) | 910 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 2908, 3646, 3673, 3703 |
| BstAUI | TGTACA | 1 cut(s) | 3040 |
| BstBI | TTCGAA | 1 cut(s) | 2153 |
| BstC8I | GCNNGC | 8 cut(s) | 841, 1177, 2015, 2436, 2988, 3822, 3826, 3925 |
| BstDSI | CCRYGG | 3 cut(s) | 1006, 2353, 3231 |
| BstFNI | CGCG | 2 cut(s) | 896, 2761 |
| BstHHI | GCGC | 1 cut(s) | 896 |
| BstMAI | GTCTC | 9 cut(s) | 25, 62, 200, 600, 1150, 1412, 1686, 2144, 2730 |
| BstNSI | RCATGY | 3 cut(s) | 2017, 2518, 3415 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1162 |
| BstSFI | CTRYAG | 7 cut(s) | 201, 1212, 1371, 1722, 2340, 2565, 3740 |
| BstSLI | GKGCMC | 1 cut(s) | 1339 |
| BstUI | CGCG | 2 cut(s) | 896, 2761 |
| BstX2I | RGATCY | 6 cut(s) | 482, 634, 914, 1550, 1928, 3473 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3238 |
| BstYI | RGATCY | 6 cut(s) | 482, 634, 914, 1550, 1928, 3473 |
| BstZ17I | GTATAC | 1 cut(s) | 707 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2292 |
| BsuI | GTATCC | 1 cut(s) | 1292 |
| BtgI | CCRYGG | 3 cut(s) | 1006, 2353, 3231 |
| BtgZI | GCGATG | 2 cut(s) | 889, 3952 |
| BtrI | CACGTC | 1 cut(s) | 91 |
| BtsIMutI | CAGTG | 7 cut(s) | 518, 1337, 1453, 1647, 1837, 1945, 2453 |
| Cac8I | GCNNGC | 8 cut(s) | 841, 1177, 2015, 2436, 2988, 3822, 3826, 3925 |
| CaiI | CAGNNNCTG | 5 cut(s) | 209, 1019, 1175, 1802, 3508 |
| CciI | TCATGA | 1 cut(s) | 1545 |
| CfoI | GCGC | 1 cut(s) | 896 |
| Cfr10I | RCCGGY | 2 cut(s) | 3899, 4010 |
| CseI | GACGC | 3 cut(s) | 859, 2600, 2750 |
| CsiI | ACCWGGT | 1 cut(s) | 35 |
| Csp6I | GTAC | 8 cut(s) | 33, 397, 1083, 2337, 2350, 2462, 3041, 3088 |
| CspAI | ACCGGT | 1 cut(s) | 4010 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 667, 702 |
| CviQI | GTAC | 8 cut(s) | 33, 397, 1083, 2337, 2350, 2462, 3041, 3088 |
| DraI | TTTAAA | 2 cut(s) | 2170, 2247 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1022 |
| EaeI | YGGCCR | 1 cut(s) | 1935 |
| Eam1104I | CTCTTC | 2 cut(s) | 239, 341 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1022 |
| EarI | CTCTTC | 2 cut(s) | 239, 341 |
| EciI | GGCGGA | 2 cut(s) | 459, 494 |
| Ecl136II | GAGCTC | 5 cut(s) | 1444, 1794, 3771, 3873, 3939 |
| Eco130I | CCWWGG | 6 cut(s) | 859, 1006, 1401, 1582, 2353, 3231 |
| Eco147I | AGGCCT | 1 cut(s) | 2714 |
| Eco24I | GRGCYC | 7 cut(s) | 1446, 1796, 2192, 2736, 3773, 3875, 3941 |
| Eco31I | GGTCTC | 3 cut(s) | 25, 62, 1150 |
| Eco32I | GATATC | 1 cut(s) | 541 |
| Eco47I | GGWCC | 9 cut(s) | 502, 1003, 1016, 1164, 1727, 3186, 3421, 3554, 3985 |
| Eco53kI | GAGCTC | 5 cut(s) | 1444, 1794, 3771, 3873, 3939 |
| Eco57I | CTGAAG | 3 cut(s) | 156, 204, 2777 |
| Eco81I | CCTNAGG | 1 cut(s) | 2292 |
| EcoICRI | GAGCTC | 5 cut(s) | 1444, 1794, 3771, 3873, 3939 |
| EcoO109I | RGGNCCY | 7 cut(s) | 1016, 1164, 1208, 1727, 3186, 3421, 3545 |
| EcoRI | GAATTC | 1 cut(s) | 3730 |
| EcoRV | GATATC | 1 cut(s) | 541 |
| EcoT14I | CCWWGG | 6 cut(s) | 859, 1006, 1401, 1582, 2353, 3231 |
| EcoT22I | ATGCAT | 2 cut(s) | 2650, 3468 |
| EcoT38I | GRGCYC | 7 cut(s) | 1446, 1796, 2192, 2736, 3773, 3875, 3941 |
| ErhI | CCWWGG | 6 cut(s) | 859, 1006, 1401, 1582, 2353, 3231 |
| FaqI | GGGAC | 8 cut(s) | 30, 660, 997, 1369, 1635, 1962, 3199, 3407 |
| FauI | CCCGC | 2 cut(s) | 1509, 2519 |
| FauNDI | CATATG | 1 cut(s) | 313 |
| FbaI | TGATCA | 2 cut(s) | 876, 2310 |
| FblI | GTMKAC | 1 cut(s) | 706 |
| FriOI | GRGCYC | 7 cut(s) | 1446, 1796, 2192, 2736, 3773, 3875, 3941 |
| FspBI | CTAG | 4 cut(s) | 632, 2097, 2381, 3825 |
| GlaI | GCGC | 1 cut(s) | 895 |
| GsaI | CCCAGC | 3 cut(s) | 1668, 2968, 3500 |
| GsuI | CTGGAG | 3 cut(s) | 113, 387, 2954 |
| HapII | CCGG | 4 cut(s) | 1654, 1934, 3900, 4011 |
| HgaI | GACGC | 3 cut(s) | 859, 2600, 2750 |
| HhaI | GCGC | 1 cut(s) | 896 |
| Hin1I | GRCGYC | 2 cut(s) | 851, 3032 |
| Hin6I | GCGC | 1 cut(s) | 894 |
| HinP1I | GCGC | 1 cut(s) | 894 |
| HindIII | AAGCTT | 2 cut(s) | 609, 683 |
| HpaII | CCGG | 4 cut(s) | 1654, 1934, 3900, 4011 |
| HphI | GGTGA | 4 cut(s) | 587, 1128, 3726, 3778 |
| Hpy166II | GTNNAC | 7 cut(s) | 707, 1049, 2453, 2765, 3088, 3557, 3863 |
| Hpy8I | GTNNAC | 7 cut(s) | 707, 1049, 2453, 2765, 3088, 3557, 3863 |
| Hpy99I | CGWCG | 1 cut(s) | 3037 |
| HpyAV | CCTTC | 7 cut(s) | 229, 529, 1325, 1427, 1472, 1768, 3998 |
| HpyCH4III | ACNGT | 9 cut(s) | 32, 264, 745, 1380, 1675, 2341, 2445, 2610, 3045 |
| HpyCH4IV | ACGT | 4 cut(s) | 75, 90, 224, 3032 |
| HpySE526I | ACGT | 4 cut(s) | 75, 90, 224, 3032 |
| Hsp92I | GRCGYC | 2 cut(s) | 851, 3032 |
| HspAI | GCGC | 1 cut(s) | 894 |
| KflI | GGGWCCC | 2 cut(s) | 3186, 3421 |
| KpnI | GGTACC | 2 cut(s) | 36, 1086 |
| Ksp22I | TGATCA | 2 cut(s) | 876, 2310 |
| LmnI | GCTCC | 9 cut(s) | 132, 1745, 2257, 2973, 3167, 3242, 3263, 3452, 3776 |
| MabI | ACCWGGT | 1 cut(s) | 35 |
| MaeI | CTAG | 4 cut(s) | 632, 2097, 2381, 3825 |
| MaeII | ACGT | 4 cut(s) | 75, 90, 224, 3032 |
| MaeIII | GTNAC | 6 cut(s) | 516, 739, 745, 1134, 1798, 2044 |
| MfeI | CAATTG | 5 cut(s) | 252, 345, 3011, 3021, 3677 |
| MflI | RGATCY | 6 cut(s) | 482, 634, 914, 1550, 1928, 3473 |
| MhlI | GDGCHC | 8 cut(s) | 1339, 1446, 1796, 2192, 2736, 3773, 3875, 3941 |
| MlyI | GAGTC | 6 cut(s) | 185, 602, 979, 1749, 3499, 3868 |
| MmeI | TCCRAC | 5 cut(s) | 630, 1723, 1906, 1966, 2521 |
| Mph1103I | ATGCAT | 2 cut(s) | 2650, 3468 |
| MseI | TTAA | 9 cut(s) | 15, 227, 911, 1455, 1964, 2169, 2246, 2634, 2655 |
| MslI | CAYNNNNRTG | 6 cut(s) | 288, 312, 415, 1122, 2687, 3236 |
| MspA1I | CMGCKG | 6 cut(s) | 1175, 1703, 2773, 2993, 3868, 3934 |
| MspCI | CTTAAG | 1 cut(s) | 910 |
| MspI | CCGG | 4 cut(s) | 1654, 1934, 3900, 4011 |
| MunI | CAATTG | 5 cut(s) | 252, 345, 3011, 3021, 3677 |
| Mva1269I | GAATGC | 5 cut(s) | 283, 1537, 3022, 3334, 3349 |
| MvnI | CGCG | 2 cut(s) | 896, 2761 |
| NciI | CCSGG | 1 cut(s) | 1654 |
| NcoI | CCATGG | 3 cut(s) | 1006, 2353, 3231 |
| NdeI | CATATG | 1 cut(s) | 313 |
| NheI | GCTAGC | 1 cut(s) | 3824 |
| NmeAIII | GCCGAG | 1 cut(s) | 320 |
| NmuCI | GTSAC | 3 cut(s) | 516, 1134, 2044 |
| NsiI | ATGCAT | 2 cut(s) | 2650, 3468 |
| NspI | RCATGY | 3 cut(s) | 2017, 2518, 3415 |
| NspV | TTCGAA | 1 cut(s) | 2153 |
| OliI | CACNNNNGTG | 1 cut(s) | 415 |
| PaeI | GCATGC | 1 cut(s) | 2017 |
| PagI | TCATGA | 1 cut(s) | 1545 |
| PasI | CCCWGGG | 1 cut(s) | 3190 |
| PceI | AGGCCT | 1 cut(s) | 2714 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 81, 433 |
| PctI | GAATGC | 5 cut(s) | 283, 1537, 3022, 3334, 3349 |
| PfeI | GAWTC | 9 cut(s) | 350, 667, 824, 831, 1249, 1342, 1841, 2177, 2777 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2333 |
| PfoI | TCCNGGA | 2 cut(s) | 1102, 3469 |
| PinAI | ACCGGT | 1 cut(s) | 4010 |
| PleI | GAGTC | 6 cut(s) | 184, 601, 979, 1748, 3499, 3867 |
| PpsI | GAGTC | 6 cut(s) | 184, 601, 979, 1748, 3499, 3867 |
| PpuMI | RGGWCCY | 5 cut(s) | 1016, 1164, 1727, 3186, 3421 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1162 |
| PshBI | ATTAAT | 1 cut(s) | 2634 |
| Psp124BI | GAGCTC | 5 cut(s) | 1446, 1796, 3773, 3875, 3941 |
| Psp1406I | AACGTT | 1 cut(s) | 75 |
| Psp5II | RGGWCCY | 5 cut(s) | 1016, 1164, 1727, 3186, 3421 |
| PspFI | CCCAGC | 3 cut(s) | 1664, 2964, 3496 |
| PspPPI | RGGWCCY | 5 cut(s) | 1016, 1164, 1727, 3186, 3421 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 151, 183 |
| PstI | CTGCAG | 2 cut(s) | 205, 2569 |
| PstNI | CAGNNNCTG | 5 cut(s) | 209, 1019, 1175, 1802, 3508 |
| PsuI | RGATCY | 6 cut(s) | 482, 634, 914, 1550, 1928, 3473 |
| PvuII | CAGCTG | 5 cut(s) | 1175, 2773, 2993, 3868, 3934 |
| RsaI | GTAC | 8 cut(s) | 34, 398, 1084, 2338, 2351, 2463, 3042, 3089 |
| RsaNI | GTAC | 8 cut(s) | 33, 397, 1083, 2337, 2350, 2462, 3041, 3088 |
| RseI | CAYNNNNRTG | 6 cut(s) | 288, 312, 415, 1122, 2687, 3236 |
| SacI | GAGCTC | 5 cut(s) | 1446, 1796, 3773, 3875, 3941 |
| SaqAI | TTAA | 9 cut(s) | 15, 227, 911, 1455, 1964, 2169, 2246, 2634, 2655 |
| SchI | GAGTC | 6 cut(s) | 185, 602, 979, 1749, 3499, 3868 |
| SduI | GDGCHC | 8 cut(s) | 1339, 1446, 1796, 2192, 2736, 3773, 3875, 3941 |
| SexAI | ACCWGGT | 1 cut(s) | 35 |
| SfcI | CTRYAG | 7 cut(s) | 201, 1212, 1371, 1722, 2340, 2565, 3740 |
| SfuI | TTCGAA | 1 cut(s) | 2153 |
| SinI | GGWCC | 9 cut(s) | 502, 1003, 1016, 1164, 1727, 3186, 3421, 3554, 3985 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 288, 312, 415, 1122, 2687, 3236 |
| SmlI | CTYRAG | 2 cut(s) | 910, 2727 |
| SmoI | CTYRAG | 2 cut(s) | 910, 2727 |
| SphI | GCATGC | 1 cut(s) | 2017 |
| SseBI | AGGCCT | 1 cut(s) | 2714 |
| SspI | AATATT | 2 cut(s) | 1594, 3589 |
| SspMI | CTAG | 4 cut(s) | 632, 2097, 2381, 3825 |
| SstI | GAGCTC | 5 cut(s) | 1446, 1796, 3773, 3875, 3941 |
| StuI | AGGCCT | 1 cut(s) | 2714 |
| StyI | CCWWGG | 6 cut(s) | 859, 1006, 1401, 1582, 2353, 3231 |
| TaaI | ACNGT | 9 cut(s) | 32, 264, 745, 1380, 1675, 2341, 2445, 2610, 3045 |
| TaiI | ACGT | 4 cut(s) | 78, 93, 227, 3035 |
| TaqI | TCGA | 5 cut(s) | 427, 1889, 2153, 2198, 3035 |
| TaqII | GACCGA | 1 cut(s) | 1174 |
| TatI | WGTACW | 2 cut(s) | 396, 3040 |
| TauI | GCSGC | 1 cut(s) | 464 |
| TfiI | GAWTC | 9 cut(s) | 350, 667, 824, 831, 1249, 1342, 1841, 2177, 2777 |
| Tru1I | TTAA | 9 cut(s) | 15, 227, 911, 1455, 1964, 2169, 2246, 2634, 2655 |
| Tru9I | TTAA | 9 cut(s) | 15, 227, 911, 1455, 1964, 2169, 2246, 2634, 2655 |
| TscAI | CASTG | 7 cut(s) | 525, 1344, 1453, 1647, 1837, 1945, 2460 |
| TseFI | GTSAC | 3 cut(s) | 516, 1134, 2044 |
| Tsp45I | GTSAC | 3 cut(s) | 516, 1134, 2044 |
| TspGWI | ACGGA | 5 cut(s) | 32, 495, 724, 1897, 2082 |
| TspRI | CASTG | 7 cut(s) | 525, 1344, 1453, 1647, 1837, 1945, 2460 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2333 |
| Vha464I | CTTAAG | 1 cut(s) | 910 |
| VpaK11BI | GGWCC | 9 cut(s) | 502, 1003, 1016, 1164, 1727, 3186, 3421, 3554, 3985 |
| VspI | ATTAAT | 1 cut(s) | 2634 |
| XbaI | TCTAGA | 1 cut(s) | 631 |
| XceI | RCATGY | 3 cut(s) | 2017, 2518, 3415 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 646, 2419 |
| XmiI | GTMKAC | 1 cut(s) | 706 |
| XspI | CTAG | 4 cut(s) | 632, 2097, 2381, 3825 |
| ZraI | GACGTC | 1 cut(s) | 3033 |
| Zsp2I | ATGCAT | 2 cut(s) | 2650, 3468 |