chromatin binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72390 AT1G72390 |
| fragaria_vesca | FvH4_6g35180 FvH4_6g35180 FvH4_6g35180 FvH4_6g35180 |
| malus_domestica | MD09G1178000.v1.1 MD17G1148700.v1.1 |
| prunus_persica | Prupe.3G037300_v2.0.a1 |
| pyrus_communis | pycom09g09640 pycom17g14200 pycom17g14240 |
| rosa_chinensis | RchiOBHm_Chr2g0146441 |
| rosa_laevigata | RLG00000020201 |
| rosa_multiflora | Rmu_sc0001986.1_g000006 Rmu_sc0014617.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00100090 |
| rosa_rugosa | Rorug02G0394400 Rorug02G0394400 Rorug02G0394500 |
| rosa_samantha | Rh2AG451200 Rh2BG463700 Rh2CG438000 Rh2DG472700 |
| rosa_wichuraiana | Rw2G036830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1888 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 308 |
| Acc36I | ACCTGC | 1 cut(s) | 1888 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 554 |
| AciI | CCGC | 8 cut(s) | 213, 254, 647, 730, 1163, 1274, 1557, 1727 |
| AclWI | GGATC | 4 cut(s) | 148, 714, 1402, 1630 |
| AcyI | GRCGYC | 1 cut(s) | 1409 |
| AfaI | GTAC | 2 cut(s) | 559, 1751 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 20, 197, 554, 1418, 1553, 1580, 1697 |
| AjnI | CCWGG | 5 cut(s) | 922, 1458, 1597, 1618, 1690 |
| Alw26I | GTCTC | 5 cut(s) | 397, 538, 954, 962, 1141 |
| AlwI | GGATC | 4 cut(s) | 148, 714, 1402, 1630 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 794, 1654 |
| Ama87I | CYCGRG | 1 cut(s) | 1912 |
| AoxI | GGCC | 4 cut(s) | 826, 936, 1688, 1700 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 618 |
| AspLEI | GCGC | 1 cut(s) | 1402 |
| AspS9I | GGNCC | 4 cut(s) | 1271, 1700, 1709, 2128 |
| AsuHPI | GGTGA | 4 cut(s) | 268, 605, 1860, 1881 |
| AsuNHI | GCTAGC | 2 cut(s) | 1159, 1967 |
| AvaI | CYCGRG | 1 cut(s) | 1912 |
| AvaII | GGWCC | 3 cut(s) | 1271, 1709, 2128 |
| AxyI | CCTNAGG | 1 cut(s) | 933 |
| BanII | GRGCYC | 2 cut(s) | 774, 1907 |
| BbvCI | CCTCAGC | 2 cut(s) | 121, 609 |
| BccI | CCATC | 8 cut(s) | 214, 548, 584, 673, 683, 841, 1018, 1726 |
| BceAI | ACGGC | 2 cut(s) | 1740, 2110 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 954, 988 |
| BciT130I | CCWGG | 5 cut(s) | 924, 1460, 1599, 1620, 1692 |
| BclI | TGATCA | 3 cut(s) | 217, 531, 1293 |
| BcoDI | GTCTC | 5 cut(s) | 397, 538, 954, 962, 1141 |
| BfaI | CTAG | 3 cut(s) | 525, 1160, 1968 |
| BfmI | CTRYAG | 3 cut(s) | 561, 1055, 1874 |
| BfuAI | ACCTGC | 1 cut(s) | 1888 |
| BlpI | GCTNAGC | 2 cut(s) | 2012, 2078 |
| Bme1390I | CCNGG | 5 cut(s) | 924, 1460, 1599, 1620, 1692 |
| Bme18I | GGWCC | 3 cut(s) | 1271, 1709, 2128 |
| BmeT110I | CYCGRG | 1 cut(s) | 1912 |
| BmgT120I | GGNCC | 4 cut(s) | 1271, 1700, 1709, 2128 |
| BmiI | GGNNCC | 6 cut(s) | 25, 367, 773, 1272, 1701, 1710 |
| BmrFI | CCNGG | 5 cut(s) | 924, 1460, 1599, 1620, 1692 |
| BmsI | GCATC | 9 cut(s) | 789, 903, 966, 1146, 1269, 1530, 1535, 1602, 1624 |
| BmtI | GCTAGC | 2 cut(s) | 1163, 1971 |
| BoxI | GACNNNNGTC | 1 cut(s) | 409 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 339, 371 |
| BpmI | CTGGAG | 2 cut(s) | 1001, 1127 |
| Bpu10I | CCTNAGC | 4 cut(s) | 121, 609, 1324, 2017 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2012, 2078 |
| BpuEI | CTTGAG | 1 cut(s) | 936 |
| BsaBI | GATNNNNATC | 1 cut(s) | 339 |
| BsaHI | GRCGYC | 1 cut(s) | 1409 |
| BsaI | GGTCTC | 4 cut(s) | 397, 538, 962, 1141 |
| BsaJI | CCNNGG | 6 cut(s) | 922, 1458, 1459, 1552, 1911, 2124 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 999, 1029 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 20, 197, 554, 1418, 1553, 1580, 1697 |
| Bse1I | ACTGG | 3 cut(s) | 42, 136, 1504 |
| Bse21I | CCTNAGG | 1 cut(s) | 933 |
| Bse3DI | GCAATG | 7 cut(s) | 132, 573, 626, 1435, 1644, 1683, 2031 |
| Bse8I | GATNNNNATC | 1 cut(s) | 339 |
| BseBI | CCWGG | 5 cut(s) | 924, 1460, 1599, 1620, 1692 |
| BseDI | CCNNGG | 6 cut(s) | 922, 1458, 1459, 1552, 1911, 2124 |
| BseJI | GATNNNNATC | 1 cut(s) | 339 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 20, 197, 554, 1418, 1553, 1580, 1697 |
| BseMI | GCAATG | 7 cut(s) | 132, 573, 626, 1435, 1644, 1683, 2031 |
| BseMII | CTCAG | 9 cut(s) | 21, 135, 600, 786, 801, 947, 1589, 2031, 2112 |
| BseNI | ACTGG | 3 cut(s) | 42, 136, 1504 |
| BseYI | CCCAGC | 3 cut(s) | 1137, 1485, 1589 |
| BshFI | GGCC | 4 cut(s) | 828, 938, 1690, 1702 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1912 |
| BslFI | GGGAC | 2 cut(s) | 1314, 1753 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 20, 197, 554, 1418, 1553, 1580, 1697 |
| BsmAI | GTCTC | 5 cut(s) | 397, 538, 954, 962, 1141 |
| BsmFI | GGGAC | 2 cut(s) | 1314, 1753 |
| BsmI | GAATGC | 2 cut(s) | 326, 750 |
| BsnI | GGCC | 4 cut(s) | 828, 938, 1690, 1702 |
| Bso31I | GGTCTC | 4 cut(s) | 397, 538, 962, 1141 |
| BsoBI | CYCGRG | 1 cut(s) | 1912 |
| Bsp1286I | GDGCHC | 2 cut(s) | 774, 1907 |
| Bsp1407I | TGTACA | 1 cut(s) | 1749 |
| Bsp143I | GATC | 9 cut(s) | 140, 217, 334, 531, 706, 996, 1293, 1394, 1622 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2012, 2078 |
| Bsp19I | CCATGG | 1 cut(s) | 2124 |
| BspACI | CCGC | 8 cut(s) | 213, 254, 647, 730, 1163, 1274, 1557, 1727 |
| BspANI | GGCC | 4 cut(s) | 828, 938, 1690, 1702 |
| BspCNI | CTCAG | 9 cut(s) | 20, 134, 601, 787, 800, 946, 1588, 2030, 2111 |
| BspLI | GGNNCC | 6 cut(s) | 25, 367, 773, 1272, 1701, 1710 |
| BspMI | ACCTGC | 1 cut(s) | 1888 |
| BspOI | GCTAGC | 2 cut(s) | 1163, 1971 |
| BspPI | GGATC | 4 cut(s) | 148, 714, 1402, 1630 |
| BspQI | GCTCTTC | 1 cut(s) | 471 |
| BspTNI | GGTCTC | 4 cut(s) | 397, 538, 962, 1141 |
| BsrDI | GCAATG | 7 cut(s) | 132, 573, 626, 1435, 1644, 1683, 2031 |
| BsrGI | TGTACA | 1 cut(s) | 1749 |
| BsrI | ACTGG | 3 cut(s) | 42, 136, 1504 |
| BssECI | CCNNGG | 6 cut(s) | 922, 1458, 1459, 1552, 1911, 2124 |
| BssMI | GATC | 9 cut(s) | 140, 217, 334, 531, 706, 996, 1293, 1394, 1622 |
| BssNI | GRCGYC | 1 cut(s) | 1409 |
| BssT1I | CCWWGG | 1 cut(s) | 2124 |
| Bst2UI | CCWGG | 5 cut(s) | 924, 1460, 1599, 1620, 1692 |
| Bst4CI | ACNGT | 3 cut(s) | 562, 666, 1366 |
| Bst6I | CTCTTC | 1 cut(s) | 471 |
| BstACI | GRCGYC | 1 cut(s) | 1409 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1804, 1840, 2030 |
| BstAUI | TGTACA | 1 cut(s) | 1749 |
| BstDSI | CCRYGG | 1 cut(s) | 2124 |
| BstEII | GGTNACC | 2 cut(s) | 256, 2162 |
| BstHHI | GCGC | 1 cut(s) | 1402 |
| BstKTI | GATC | 9 cut(s) | 143, 220, 337, 534, 709, 999, 1296, 1397, 1625 |
| BstMAI | GTCTC | 5 cut(s) | 397, 538, 954, 962, 1141 |
| BstMBI | GATC | 9 cut(s) | 140, 217, 334, 531, 706, 996, 1293, 1394, 1622 |
| BstNI | CCWGG | 5 cut(s) | 924, 1460, 1599, 1620, 1692 |
| BstNSI | RCATGY | 3 cut(s) | 1186, 1564, 2033 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 409 |
| BstPI | GGTNACC | 2 cut(s) | 256, 2162 |
| BstSCI | CCNGG | 5 cut(s) | 922, 1458, 1597, 1618, 1690 |
| BstSFI | CTRYAG | 3 cut(s) | 561, 1055, 1874 |
| BstX2I | RGATCY | 3 cut(s) | 140, 1394, 1622 |
| BstYI | RGATCY | 3 cut(s) | 140, 1394, 1622 |
| Bsu36I | CCTNAGG | 1 cut(s) | 933 |
| BsuRI | GGCC | 4 cut(s) | 828, 938, 1690, 1702 |
| BtgI | CCRYGG | 1 cut(s) | 2124 |
| BtsI | GCAGTG | 1 cut(s) | 972 |
| BtsIMutI | CAGTG | 4 cut(s) | 49, 674, 972, 1371 |
| BveI | ACCTGC | 1 cut(s) | 1888 |
| CaiI | CAGNNNCTG | 2 cut(s) | 794, 1654 |
| CfoI | GCGC | 1 cut(s) | 1402 |
| Cfr13I | GGNCC | 4 cut(s) | 1271, 1700, 1709, 2128 |
| CseI | GACGC | 1 cut(s) | 1417 |
| Csp6I | GTAC | 2 cut(s) | 558, 1750 |
| CviQI | GTAC | 2 cut(s) | 558, 1750 |
| DpnI | GATC | 9 cut(s) | 142, 219, 336, 533, 708, 998, 1295, 1396, 1624 |
| DpnII | GATC | 9 cut(s) | 140, 217, 334, 531, 706, 996, 1293, 1394, 1622 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 308 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 308 |
| Eam1104I | CTCTTC | 1 cut(s) | 471 |
| EarI | CTCTTC | 1 cut(s) | 471 |
| Eco130I | CCWWGG | 1 cut(s) | 2124 |
| Eco147I | AGGCCT | 1 cut(s) | 938 |
| Eco24I | GRGCYC | 2 cut(s) | 774, 1907 |
| Eco31I | GGTCTC | 4 cut(s) | 397, 538, 962, 1141 |
| Eco47I | GGWCC | 3 cut(s) | 1271, 1709, 2128 |
| Eco81I | CCTNAGG | 1 cut(s) | 933 |
| Eco88I | CYCGRG | 1 cut(s) | 1912 |
| Eco91I | GGTNACC | 2 cut(s) | 256, 2162 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1700 |
| EcoO65I | GGTNACC | 2 cut(s) | 256, 2162 |
| EcoRI | GAATTC | 1 cut(s) | 970 |
| EcoRII | CCWGG | 5 cut(s) | 922, 1458, 1597, 1618, 1690 |
| EcoT14I | CCWWGG | 1 cut(s) | 2124 |
| EcoT22I | ATGCAT | 3 cut(s) | 328, 1617, 2031 |
| EcoT38I | GRGCYC | 2 cut(s) | 774, 1907 |
| ErhI | CCWWGG | 1 cut(s) | 2124 |
| FaqI | GGGAC | 2 cut(s) | 1314, 1753 |
| FauI | CCCGC | 2 cut(s) | 737, 1720 |
| FbaI | TGATCA | 3 cut(s) | 217, 531, 1293 |
| FriOI | GRGCYC | 2 cut(s) | 774, 1907 |
| FspBI | CTAG | 3 cut(s) | 525, 1160, 1968 |
| GlaI | GCGC | 1 cut(s) | 1401 |
| GsaI | CCCAGC | 3 cut(s) | 1141, 1489, 1593 |
| GsuI | CTGGAG | 2 cut(s) | 1001, 1127 |
| HaeIII | GGCC | 4 cut(s) | 828, 938, 1690, 1702 |
| HgaI | GACGC | 1 cut(s) | 1417 |
| HhaI | GCGC | 1 cut(s) | 1402 |
| Hin1I | GRCGYC | 1 cut(s) | 1409 |
| Hin6I | GCGC | 1 cut(s) | 1400 |
| HinP1I | GCGC | 1 cut(s) | 1400 |
| HindIII | AAGCTT | 2 cut(s) | 1208, 1321 |
| HphI | GGTGA | 4 cut(s) | 268, 605, 1860, 1881 |
| Hpy166II | GTNNAC | 3 cut(s) | 674, 1712, 2006 |
| Hpy188I | TCNGA | 6 cut(s) | 541, 703, 1440, 1650, 1656, 1998 |
| Hpy188III | TCNNGA | 6 cut(s) | 313, 1144, 1419, 1581, 1914, 2051 |
| Hpy8I | GTNNAC | 3 cut(s) | 674, 1712, 2006 |
| HpyAV | CCTTC | 3 cut(s) | 201, 466, 2141 |
| HpyCH4III | ACNGT | 3 cut(s) | 562, 666, 1366 |
| Hsp92I | GRCGYC | 1 cut(s) | 1409 |
| HspAI | GCGC | 1 cut(s) | 1400 |
| Ksp22I | TGATCA | 3 cut(s) | 217, 531, 1293 |
| Kzo9I | GATC | 9 cut(s) | 140, 217, 334, 531, 706, 996, 1293, 1394, 1622 |
| LguI | GCTCTTC | 1 cut(s) | 471 |
| LmnI | GCTCC | 5 cut(s) | 23, 114, 777, 1146, 1376 |
| LweI | GCATC | 9 cut(s) | 789, 903, 966, 1146, 1269, 1530, 1535, 1602, 1624 |
| MaeI | CTAG | 3 cut(s) | 525, 1160, 1968 |
| MaeIII | GTNAC | 5 cut(s) | 256, 1002, 1188, 2150, 2162 |
| MalI | GATC | 9 cut(s) | 142, 219, 336, 533, 708, 998, 1295, 1396, 1624 |
| MboI | GATC | 9 cut(s) | 140, 217, 334, 531, 706, 996, 1293, 1394, 1622 |
| MboII | GAAGA | 6 cut(s) | 201, 488, 500, 611, 887, 1515 |
| MfeI | CAATTG | 2 cut(s) | 1817, 1838 |
| MflI | RGATCY | 3 cut(s) | 140, 1394, 1622 |
| MhlI | GDGCHC | 2 cut(s) | 774, 1907 |
| MlyI | GAGTC | 4 cut(s) | 62, 1010, 1645, 2011 |
| MmeI | TCCRAC | 5 cut(s) | 118, 178, 739, 1203, 1336 |
| Mph1103I | ATGCAT | 3 cut(s) | 328, 1617, 2031 |
| MroXI | GAANNNNTTC | 1 cut(s) | 618 |
| MseI | TTAA | 4 cut(s) | 878, 1454, 1481, 1508 |
| MslI | CAYNNNNRTG | 3 cut(s) | 911, 965, 1295 |
| MspA1I | CMGCKG | 4 cut(s) | 215, 647, 794, 1589 |
| MspR9I | CCNGG | 5 cut(s) | 924, 1460, 1599, 1620, 1692 |
| MunI | CAATTG | 2 cut(s) | 1817, 1838 |
| Mva1269I | GAATGC | 2 cut(s) | 326, 750 |
| MvaI | CCWGG | 5 cut(s) | 924, 1460, 1599, 1620, 1692 |
| NcoI | CCATGG | 1 cut(s) | 2124 |
| NdeII | GATC | 9 cut(s) | 140, 217, 334, 531, 706, 996, 1293, 1394, 1622 |
| NheI | GCTAGC | 2 cut(s) | 1159, 1967 |
| NlaIV | GGNNCC | 6 cut(s) | 25, 367, 773, 1272, 1701, 1710 |
| NmuCI | GTSAC | 2 cut(s) | 256, 1002 |
| NsiI | ATGCAT | 3 cut(s) | 328, 1617, 2031 |
| NspI | RCATGY | 3 cut(s) | 1186, 1564, 2033 |
| PaeI | GCATGC | 1 cut(s) | 2033 |
| PaqCI | CACCTGC | 1 cut(s) | 1888 |
| PasI | CCCWGGG | 1 cut(s) | 1459 |
| PceI | AGGCCT | 1 cut(s) | 938 |
| PciSI | GCTCTTC | 1 cut(s) | 471 |
| PctI | GAATGC | 2 cut(s) | 326, 750 |
| PdmI | GAANNNNTTC | 1 cut(s) | 618 |
| PfeI | GAWTC | 8 cut(s) | 392, 698, 815, 892, 1120, 1132, 1441, 1657 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 554 |
| PfoI | TCCNGGA | 1 cut(s) | 1618 |
| PleI | GAGTC | 4 cut(s) | 61, 1009, 1645, 2010 |
| PpsI | GAGTC | 4 cut(s) | 61, 1009, 1645, 2010 |
| PshAI | GACNNNNGTC | 1 cut(s) | 409 |
| Psp6I | CCWGG | 5 cut(s) | 922, 1458, 1597, 1618, 1690 |
| PspEI | GGTNACC | 2 cut(s) | 256, 2162 |
| PspFI | CCCAGC | 3 cut(s) | 1137, 1485, 1589 |
| PspGI | CCWGG | 5 cut(s) | 922, 1458, 1597, 1618, 1690 |
| PspN4I | GGNNCC | 6 cut(s) | 25, 367, 773, 1272, 1701, 1710 |
| PspPI | GGNCC | 4 cut(s) | 1271, 1700, 1709, 2128 |
| PstNI | CAGNNNCTG | 2 cut(s) | 794, 1654 |
| PsuI | RGATCY | 3 cut(s) | 140, 1394, 1622 |
| PvuII | CAGCTG | 2 cut(s) | 794, 1589 |
| RsaI | GTAC | 2 cut(s) | 559, 1751 |
| RsaNI | GTAC | 2 cut(s) | 558, 1750 |
| RseI | CAYNNNNRTG | 3 cut(s) | 911, 965, 1295 |
| SapI | GCTCTTC | 1 cut(s) | 471 |
| SaqAI | TTAA | 4 cut(s) | 878, 1454, 1481, 1508 |
| Sau3AI | GATC | 9 cut(s) | 140, 217, 334, 531, 706, 996, 1293, 1394, 1622 |
| Sau96I | GGNCC | 4 cut(s) | 1271, 1700, 1709, 2128 |
| SchI | GAGTC | 4 cut(s) | 62, 1010, 1645, 2011 |
| ScrFI | CCNGG | 5 cut(s) | 924, 1460, 1599, 1620, 1692 |
| SduI | GDGCHC | 2 cut(s) | 774, 1907 |
| SfaNI | GCATC | 9 cut(s) | 789, 903, 966, 1146, 1269, 1530, 1535, 1602, 1624 |
| SfcI | CTRYAG | 3 cut(s) | 561, 1055, 1874 |
| SinI | GGWCC | 3 cut(s) | 1271, 1709, 2128 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 911, 965, 1295 |
| SmlI | CTYRAG | 1 cut(s) | 951 |
| SmoI | CTYRAG | 1 cut(s) | 951 |
| SphI | GCATGC | 1 cut(s) | 2033 |
| SseBI | AGGCCT | 1 cut(s) | 938 |
| SsiI | CCGC | 8 cut(s) | 213, 254, 647, 730, 1163, 1274, 1557, 1727 |
| SspI | AATATT | 1 cut(s) | 1471 |
| SspMI | CTAG | 3 cut(s) | 525, 1160, 1968 |
| StuI | AGGCCT | 1 cut(s) | 938 |
| StyD4I | CCNGG | 5 cut(s) | 922, 1458, 1597, 1618, 1690 |
| StyI | CCWWGG | 1 cut(s) | 2124 |
| TaaI | ACNGT | 3 cut(s) | 562, 666, 1366 |
| TaqI | TCGA | 3 cut(s) | 413, 974, 999 |
| TatI | WGTACW | 1 cut(s) | 1749 |
| TauI | GCSGC | 2 cut(s) | 1166, 1560 |
| TfiI | GAWTC | 8 cut(s) | 392, 698, 815, 892, 1120, 1132, 1441, 1657 |
| Tru1I | TTAA | 4 cut(s) | 878, 1454, 1481, 1508 |
| Tru9I | TTAA | 4 cut(s) | 878, 1454, 1481, 1508 |
| TscAI | CASTG | 4 cut(s) | 49, 681, 972, 1371 |
| TseFI | GTSAC | 2 cut(s) | 256, 1002 |
| Tsp45I | GTSAC | 2 cut(s) | 256, 1002 |
| TspDTI | ATGAA | 6 cut(s) | 384, 452, 861, 1463, 1769, 2156 |
| TspGWI | ACGGA | 2 cut(s) | 109, 2146 |
| TspRI | CASTG | 4 cut(s) | 49, 681, 972, 1371 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 554 |
| VpaK11BI | GGWCC | 3 cut(s) | 1271, 1709, 2128 |
| XceI | RCATGY | 3 cut(s) | 1186, 1564, 2033 |
| XmnI | GAANNNNTTC | 1 cut(s) | 618 |
| XspI | CTAG | 3 cut(s) | 525, 1160, 1968 |
| Zsp2I | ATGCAT | 3 cut(s) | 328, 1617, 2031 |