chromatin binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72390 AT1G72390 |
| fragaria_vesca | FvH4_6g35180 FvH4_6g35180 FvH4_6g35180 FvH4_6g35180 |
| malus_domestica | MD09G1178000.v1.1 MD17G1148700.v1.1 |
| prunus_persica | Prupe.3G037300_v2.0.a1 |
| pyrus_communis | pycom09g09640 pycom17g14200 pycom17g14240 |
| rosa_chinensis | RchiOBHm_Chr2g0146441 |
| rosa_laevigata | RLG00000020201 |
| rosa_multiflora | Rmu_sc0001986.1_g000006 Rmu_sc0014617.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00100090 |
| rosa_rugosa | Rorug02G0394400 Rorug02G0394400 Rorug02G0394500 |
| rosa_samantha | Rh2AG451200 Rh2BG463700 Rh2CG438000 Rh2DG472700 |
| rosa_wichuraiana | Rw2G036830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 3038 |
| Acc65I | GGTACC | 2 cut(s) | 32, 1085 |
| AccB1I | GGYRCC | 4 cut(s) | 32, 1085, 1400, 1570 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2336 |
| AccI | GTMKAC | 1 cut(s) | 709 |
| AccII | CGCG | 2 cut(s) | 899, 2764 |
| AclI | AACGTT | 1 cut(s) | 75 |
| AclWI | GGATC | 8 cut(s) | 480, 493, 632, 1021, 1240, 1548, 1939, 3493 |
| AcoI | YGGCCR | 1 cut(s) | 1938 |
| AcuI | CTGAAG | 3 cut(s) | 159, 207, 2780 |
| AcyI | GRCGYC | 2 cut(s) | 854, 3035 |
| AfaI | GTAC | 8 cut(s) | 34, 401, 1087, 2341, 2354, 2466, 3045, 3092 |
| AfeI | AGCGCT | 1 cut(s) | 192 |
| AflII | CTTAAG | 1 cut(s) | 913 |
| AflIII | ACRYGT | 1 cut(s) | 93 |
| AgeI | ACCGGT | 1 cut(s) | 29 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1025 |
| AjiI | CACGTC | 1 cut(s) | 94 |
| AleI | CACNNNNGTG | 1 cut(s) | 418 |
| Alw21I | GWGCWC | 5 cut(s) | 1449, 1799, 3761, 3863, 3929 |
| AlwI | GGATC | 8 cut(s) | 480, 493, 632, 1021, 1240, 1548, 1939, 3493 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 212, 1022, 1178, 1805, 3517 |
| Aor51HI | AGCGCT | 1 cut(s) | 192 |
| ApaI | GGGCCC | 1 cut(s) | 3558 |
| AseI | ATTAAT | 1 cut(s) | 2637 |
| AsiGI | ACCGGT | 1 cut(s) | 29 |
| Asp718I | GGTACC | 2 cut(s) | 32, 1085 |
| AspLEI | GCGC | 2 cut(s) | 193, 899 |
| AsuC2I | CCSGG | 1 cut(s) | 1657 |
| AsuHPI | GGTGA | 4 cut(s) | 590, 1131, 3714, 3766 |
| AsuII | TTCGAA | 1 cut(s) | 2156 |
| AsuNHI | GCTAGC | 1 cut(s) | 3812 |
| AvaII | GGWCC | 9 cut(s) | 505, 1006, 1019, 1167, 1730, 3198, 3433, 3563, 3973 |
| AxyI | CCTNAGG | 1 cut(s) | 2295 |
| BaeGI | GKGCMC | 2 cut(s) | 1342, 3558 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1069, 1102 |
| BamHI | GGATCC | 1 cut(s) | 485 |
| BanI | GGYRCC | 4 cut(s) | 32, 1085, 1400, 1570 |
| BanII | GRGCYC | 8 cut(s) | 1449, 1799, 2195, 2739, 3558, 3761, 3863, 3929 |
| Bbv12I | GWGCWC | 5 cut(s) | 1449, 1799, 3761, 3863, 3929 |
| BbvCI | CCTCAGC | 4 cut(s) | 1171, 1912, 2928, 3702 |
| BceAI | ACGGC | 2 cut(s) | 1351, 3719 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 89, 123, 289, 323 |
| BciVI | GTATCC | 1 cut(s) | 1295 |
| BclI | TGATCA | 2 cut(s) | 879, 2313 |
| BcnI | CCSGG | 1 cut(s) | 1657 |
| BfaI | CTAG | 4 cut(s) | 635, 2100, 2384, 3813 |
| BfmI | CTRYAG | 8 cut(s) | 204, 1215, 1374, 1725, 2343, 2568, 3728, 3996 |
| BfoI | RGCGCY | 1 cut(s) | 194 |
| BfrI | CTTAAG | 1 cut(s) | 913 |
| BfuI | GTATCC | 1 cut(s) | 1295 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1766 |
| BglII | AGATCT | 1 cut(s) | 917 |
| BlpI | GCTNAGC | 2 cut(s) | 3857, 3923 |
| Bme18I | GGWCC | 9 cut(s) | 505, 1006, 1019, 1167, 1730, 3198, 3433, 3563, 3973 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1025 |
| BmgBI | CACGTC | 1 cut(s) | 94 |
| BmtI | GCTAGC | 1 cut(s) | 3816 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1165 |
| BpmI | CTGGAG | 3 cut(s) | 116, 390, 2957 |
| Bpu10I | CCTNAGC | 5 cut(s) | 1171, 1912, 2928, 3702, 3862 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 3857, 3923 |
| Bpu14I | TTCGAA | 1 cut(s) | 2156 |
| BpuEI | CTTGAG | 1 cut(s) | 2715 |
| BpuMI | CCSGG | 1 cut(s) | 1657 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1064 |
| BsaHI | GRCGYC | 2 cut(s) | 854, 3035 |
| BsaI | GGTCTC | 3 cut(s) | 25, 62, 1153 |
| BsaWI | WCCGGW | 1 cut(s) | 29 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 562, 592, 1613, 1643 |
| Bse118I | RCCGGY | 2 cut(s) | 29, 3887 |
| Bse21I | CCTNAGG | 1 cut(s) | 2295 |
| Bse3DI | GCAATG | 7 cut(s) | 1197, 1797, 1923, 2355, 3074, 3366, 3555 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1064 |
| BseGI | GGATG | 9 cut(s) | 1102, 1267, 1414, 1624, 2316, 2651, 2697, 2962, 3411 |
| BseJI | GATNNNNATC | 1 cut(s) | 1064 |
| BseMI | GCAATG | 7 cut(s) | 1197, 1797, 1923, 2355, 3074, 3366, 3555 |
| BseRI | GAGGAG | 3 cut(s) | 45, 103, 3288 |
| BseSI | GKGCMC | 2 cut(s) | 1342, 3558 |
| BseYI | CCCAGC | 3 cut(s) | 1667, 2967, 3505 |
| BsgI | GTGCAG | 2 cut(s) | 293, 3713 |
| Bsh1236I | CGCG | 2 cut(s) | 899, 2764 |
| BshNI | GGYRCC | 4 cut(s) | 32, 1085, 1400, 1570 |
| BshTI | ACCGGT | 1 cut(s) | 29 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1449, 1799, 3761, 3863, 3929 |
| BsiSI | CCGG | 4 cut(s) | 30, 1657, 1937, 3888 |
| BslFI | GGGAC | 7 cut(s) | 30, 1000, 1372, 1638, 1965, 3211, 3419 |
| BsmFI | GGGAC | 7 cut(s) | 30, 1000, 1372, 1638, 1965, 3211, 3419 |
| BsmI | GAATGC | 5 cut(s) | 286, 1540, 3025, 3346, 3361 |
| Bso31I | GGTCTC | 3 cut(s) | 25, 62, 1153 |
| Bsp119I | TTCGAA | 1 cut(s) | 2156 |
| Bsp120I | GGGCCC | 1 cut(s) | 3554 |
| Bsp1286I | GDGCHC | 9 cut(s) | 1342, 1449, 1799, 2195, 2739, 3558, 3761, 3863, 3929 |
| Bsp1407I | TGTACA | 1 cut(s) | 3043 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 3857, 3923 |
| Bsp19I | CCATGG | 4 cut(s) | 1009, 2356, 3243, 3558 |
| BspFNI | CGCG | 2 cut(s) | 899, 2764 |
| BspHI | TCATGA | 1 cut(s) | 1548 |
| BspMAI | CTGCAG | 2 cut(s) | 208, 2572 |
| BspOI | GCTAGC | 1 cut(s) | 3816 |
| BspPI | GGATC | 8 cut(s) | 480, 493, 632, 1021, 1240, 1548, 1939, 3493 |
| BspT104I | TTCGAA | 1 cut(s) | 2156 |
| BspT107I | GGYRCC | 4 cut(s) | 32, 1085, 1400, 1570 |
| BspTI | CTTAAG | 1 cut(s) | 913 |
| BspTNI | GGTCTC | 3 cut(s) | 25, 62, 1153 |
| BsrDI | GCAATG | 7 cut(s) | 1197, 1797, 1923, 2355, 3074, 3366, 3555 |
| BsrFI | RCCGGY | 2 cut(s) | 29, 3887 |
| BsrGI | TGTACA | 1 cut(s) | 3043 |
| BssAI | RCCGGY | 2 cut(s) | 29, 3887 |
| BssNAI | GTATAC | 1 cut(s) | 710 |
| BssNI | GRCGYC | 2 cut(s) | 854, 3035 |
| BssT1I | CCWWGG | 7 cut(s) | 862, 1009, 1404, 1585, 2356, 3243, 3558 |
| Bst1107I | GTATAC | 1 cut(s) | 710 |
| Bst4CI | ACNGT | 8 cut(s) | 748, 1383, 1678, 2053, 2344, 2448, 2613, 3048 |
| Bst6I | CTCTTC | 2 cut(s) | 242, 344 |
| BstACI | GRCGYC | 2 cut(s) | 854, 3035 |
| BstAFI | CTTAAG | 1 cut(s) | 913 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 2911, 3634, 3661, 3691 |
| BstAUI | TGTACA | 1 cut(s) | 3043 |
| BstBI | TTCGAA | 1 cut(s) | 2156 |
| BstC8I | GCNNGC | 8 cut(s) | 844, 1180, 2018, 2439, 3394, 3810, 3814, 3913 |
| BstDSI | CCRYGG | 4 cut(s) | 1009, 2356, 3243, 3558 |
| BstF5I | GGATG | 9 cut(s) | 1102, 1267, 1414, 1624, 2316, 2651, 2697, 2962, 3411 |
| BstFNI | CGCG | 2 cut(s) | 899, 2764 |
| BstH2I | RGCGCY | 1 cut(s) | 194 |
| BstHHI | GCGC | 2 cut(s) | 193, 899 |
| BstNSI | RCATGY | 3 cut(s) | 2020, 2521, 3427 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1165 |
| BstSFI | CTRYAG | 8 cut(s) | 204, 1215, 1374, 1725, 2343, 2568, 3728, 3996 |
| BstSLI | GKGCMC | 2 cut(s) | 1342, 3558 |
| BstUI | CGCG | 2 cut(s) | 899, 2764 |
| BstX2I | RGATCY | 6 cut(s) | 485, 637, 917, 1553, 1931, 3485 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3250 |
| BstYI | RGATCY | 6 cut(s) | 485, 637, 917, 1553, 1931, 3485 |
| BstZ17I | GTATAC | 1 cut(s) | 710 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2295 |
| BsuI | GTATCC | 1 cut(s) | 1295 |
| BtgI | CCRYGG | 4 cut(s) | 1009, 2356, 3243, 3558 |
| BtgZI | GCGATG | 2 cut(s) | 892, 3940 |
| BtrI | CACGTC | 1 cut(s) | 94 |
| BtsCI | GGATG | 9 cut(s) | 1102, 1267, 1414, 1624, 2316, 2651, 2697, 2962, 3411 |
| BtsIMutI | CAGTG | 7 cut(s) | 521, 1340, 1456, 1650, 1840, 1948, 2456 |
| Cac8I | GCNNGC | 8 cut(s) | 844, 1180, 2018, 2439, 3394, 3810, 3814, 3913 |
| CaiI | CAGNNNCTG | 5 cut(s) | 212, 1022, 1178, 1805, 3517 |
| CciI | TCATGA | 1 cut(s) | 1548 |
| CfoI | GCGC | 2 cut(s) | 193, 899 |
| Cfr10I | RCCGGY | 2 cut(s) | 29, 3887 |
| CseI | GACGC | 2 cut(s) | 862, 2753 |
| CsiI | ACCWGGT | 1 cut(s) | 35 |
| Csp6I | GTAC | 8 cut(s) | 33, 400, 1086, 2340, 2353, 2465, 3044, 3091 |
| CspAI | ACCGGT | 1 cut(s) | 29 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 670, 705 |
| CviQI | GTAC | 8 cut(s) | 33, 400, 1086, 2340, 2353, 2465, 3044, 3091 |
| DraI | TTTAAA | 2 cut(s) | 2173, 2250 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1025 |
| EaeI | YGGCCR | 1 cut(s) | 1938 |
| Eam1104I | CTCTTC | 2 cut(s) | 242, 344 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1025 |
| EarI | CTCTTC | 2 cut(s) | 242, 344 |
| EciI | GGCGGA | 2 cut(s) | 462, 497 |
| Ecl136II | GAGCTC | 5 cut(s) | 1447, 1797, 3759, 3861, 3927 |
| Eco130I | CCWWGG | 7 cut(s) | 862, 1009, 1404, 1585, 2356, 3243, 3558 |
| Eco147I | AGGCCT | 1 cut(s) | 2717 |
| Eco24I | GRGCYC | 8 cut(s) | 1449, 1799, 2195, 2739, 3558, 3761, 3863, 3929 |
| Eco31I | GGTCTC | 3 cut(s) | 25, 62, 1153 |
| Eco32I | GATATC | 1 cut(s) | 544 |
| Eco47I | GGWCC | 9 cut(s) | 505, 1006, 1019, 1167, 1730, 3198, 3433, 3563, 3973 |
| Eco47III | AGCGCT | 1 cut(s) | 192 |
| Eco53kI | GAGCTC | 5 cut(s) | 1447, 1797, 3759, 3861, 3927 |
| Eco57I | CTGAAG | 3 cut(s) | 159, 207, 2780 |
| Eco81I | CCTNAGG | 1 cut(s) | 2295 |
| EcoICRI | GAGCTC | 5 cut(s) | 1447, 1797, 3759, 3861, 3927 |
| EcoO109I | RGGNCCY | 7 cut(s) | 1019, 1167, 1211, 1730, 3198, 3433, 3554 |
| EcoRI | GAATTC | 1 cut(s) | 3718 |
| EcoRV | GATATC | 1 cut(s) | 544 |
| EcoT14I | CCWWGG | 7 cut(s) | 862, 1009, 1404, 1585, 2356, 3243, 3558 |
| EcoT22I | ATGCAT | 2 cut(s) | 2653, 4009 |
| EcoT38I | GRGCYC | 8 cut(s) | 1449, 1799, 2195, 2739, 3558, 3761, 3863, 3929 |
| ErhI | CCWWGG | 7 cut(s) | 862, 1009, 1404, 1585, 2356, 3243, 3558 |
| FaqI | GGGAC | 7 cut(s) | 30, 1000, 1372, 1638, 1965, 3211, 3419 |
| FauI | CCCGC | 2 cut(s) | 1512, 2522 |
| FauNDI | CATATG | 1 cut(s) | 316 |
| FbaI | TGATCA | 2 cut(s) | 879, 2313 |
| FblI | GTMKAC | 1 cut(s) | 709 |
| FokI | GGATG | 9 cut(s) | 1089, 1254, 1421, 1631, 2323, 2638, 2704, 2949, 3418 |
| FriOI | GRGCYC | 8 cut(s) | 1449, 1799, 2195, 2739, 3558, 3761, 3863, 3929 |
| FspBI | CTAG | 4 cut(s) | 635, 2100, 2384, 3813 |
| GlaI | GCGC | 2 cut(s) | 192, 898 |
| GsaI | CCCAGC | 3 cut(s) | 1671, 2971, 3509 |
| GsuI | CTGGAG | 3 cut(s) | 116, 390, 2957 |
| HaeII | RGCGCY | 1 cut(s) | 194 |
| HapII | CCGG | 4 cut(s) | 30, 1657, 1937, 3888 |
| HgaI | GACGC | 2 cut(s) | 862, 2753 |
| HhaI | GCGC | 2 cut(s) | 193, 899 |
| Hin1I | GRCGYC | 2 cut(s) | 854, 3035 |
| Hin6I | GCGC | 2 cut(s) | 191, 897 |
| HinP1I | GCGC | 2 cut(s) | 191, 897 |
| HindIII | AAGCTT | 2 cut(s) | 612, 686 |
| HpaII | CCGG | 4 cut(s) | 30, 1657, 1937, 3888 |
| HphI | GGTGA | 4 cut(s) | 590, 1131, 3714, 3766 |
| Hpy166II | GTNNAC | 7 cut(s) | 710, 1052, 2456, 2768, 3091, 3566, 3851 |
| Hpy8I | GTNNAC | 7 cut(s) | 710, 1052, 2456, 2768, 3091, 3566, 3851 |
| Hpy99I | CGWCG | 1 cut(s) | 3040 |
| HpyAV | CCTTC | 7 cut(s) | 232, 532, 1328, 1430, 1475, 1771, 3986 |
| HpyCH4III | ACNGT | 8 cut(s) | 748, 1383, 1678, 2053, 2344, 2448, 2613, 3048 |
| HpyCH4IV | ACGT | 4 cut(s) | 75, 93, 227, 3035 |
| HpySE526I | ACGT | 4 cut(s) | 75, 93, 227, 3035 |
| Hsp92I | GRCGYC | 2 cut(s) | 854, 3035 |
| HspAI | GCGC | 2 cut(s) | 191, 897 |
| KflI | GGGWCCC | 2 cut(s) | 3198, 3433 |
| KpnI | GGTACC | 2 cut(s) | 36, 1089 |
| Ksp22I | TGATCA | 2 cut(s) | 879, 2313 |
| LmnI | GCTCC | 9 cut(s) | 135, 1748, 2260, 2976, 3179, 3254, 3275, 3464, 3764 |
| MabI | ACCWGGT | 1 cut(s) | 35 |
| MaeI | CTAG | 4 cut(s) | 635, 2100, 2384, 3813 |
| MaeII | ACGT | 4 cut(s) | 75, 93, 227, 3035 |
| MaeIII | GTNAC | 6 cut(s) | 519, 742, 748, 1137, 1801, 2047 |
| MfeI | CAATTG | 5 cut(s) | 255, 348, 3014, 3024, 3665 |
| MflI | RGATCY | 6 cut(s) | 485, 637, 917, 1553, 1931, 3485 |
| MhlI | GDGCHC | 9 cut(s) | 1342, 1449, 1799, 2195, 2739, 3558, 3761, 3863, 3929 |
| MlyI | GAGTC | 6 cut(s) | 188, 605, 982, 1752, 3508, 3856 |
| MmeI | TCCRAC | 6 cut(s) | 633, 698, 1726, 1909, 1969, 2524 |
| Mph1103I | ATGCAT | 2 cut(s) | 2653, 4009 |
| MseI | TTAA | 9 cut(s) | 15, 230, 914, 1458, 1967, 2172, 2249, 2637, 2658 |
| MslI | CAYNNNNRTG | 6 cut(s) | 291, 315, 418, 1125, 2690, 3248 |
| MspA1I | CMGCKG | 6 cut(s) | 1178, 1706, 2776, 2996, 3856, 3922 |
| MspCI | CTTAAG | 1 cut(s) | 913 |
| MspI | CCGG | 4 cut(s) | 30, 1657, 1937, 3888 |
| MunI | CAATTG | 5 cut(s) | 255, 348, 3014, 3024, 3665 |
| Mva1269I | GAATGC | 5 cut(s) | 286, 1540, 3025, 3346, 3361 |
| MvnI | CGCG | 2 cut(s) | 899, 2764 |
| NciI | CCSGG | 1 cut(s) | 1657 |
| NcoI | CCATGG | 4 cut(s) | 1009, 2356, 3243, 3558 |
| NdeI | CATATG | 1 cut(s) | 316 |
| NheI | GCTAGC | 1 cut(s) | 3812 |
| NmeAIII | GCCGAG | 1 cut(s) | 323 |
| NmuCI | GTSAC | 3 cut(s) | 519, 1137, 2047 |
| NsiI | ATGCAT | 2 cut(s) | 2653, 4009 |
| NspI | RCATGY | 3 cut(s) | 2020, 2521, 3427 |
| NspV | TTCGAA | 1 cut(s) | 2156 |
| OliI | CACNNNNGTG | 1 cut(s) | 418 |
| PaeI | GCATGC | 1 cut(s) | 2020 |
| PagI | TCATGA | 1 cut(s) | 1548 |
| PasI | CCCWGGG | 1 cut(s) | 3202 |
| PceI | AGGCCT | 1 cut(s) | 2717 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 436 |
| PctI | GAATGC | 5 cut(s) | 286, 1540, 3025, 3346, 3361 |
| PfeI | GAWTC | 9 cut(s) | 353, 670, 827, 834, 1252, 1345, 1844, 2180, 2780 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2336 |
| PfoI | TCCNGGA | 2 cut(s) | 1105, 3481 |
| PinAI | ACCGGT | 1 cut(s) | 29 |
| PleI | GAGTC | 6 cut(s) | 187, 604, 982, 1751, 3508, 3855 |
| PpsI | GAGTC | 6 cut(s) | 187, 604, 982, 1751, 3508, 3855 |
| PpuMI | RGGWCCY | 5 cut(s) | 1019, 1167, 1730, 3198, 3433 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1165 |
| PshBI | ATTAAT | 1 cut(s) | 2637 |
| Psp124BI | GAGCTC | 5 cut(s) | 1449, 1799, 3761, 3863, 3929 |
| Psp1406I | AACGTT | 1 cut(s) | 75 |
| Psp5II | RGGWCCY | 5 cut(s) | 1019, 1167, 1730, 3198, 3433 |
| PspFI | CCCAGC | 3 cut(s) | 1667, 2967, 3505 |
| PspOMI | GGGCCC | 1 cut(s) | 3554 |
| PspPPI | RGGWCCY | 5 cut(s) | 1019, 1167, 1730, 3198, 3433 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 154, 186 |
| PstI | CTGCAG | 2 cut(s) | 208, 2572 |
| PstNI | CAGNNNCTG | 5 cut(s) | 212, 1022, 1178, 1805, 3517 |
| PsuI | RGATCY | 6 cut(s) | 485, 637, 917, 1553, 1931, 3485 |
| PvuII | CAGCTG | 5 cut(s) | 1178, 2776, 2996, 3856, 3922 |
| RsaI | GTAC | 8 cut(s) | 34, 401, 1087, 2341, 2354, 2466, 3045, 3092 |
| RsaNI | GTAC | 8 cut(s) | 33, 400, 1086, 2340, 2353, 2465, 3044, 3091 |
| RseI | CAYNNNNRTG | 6 cut(s) | 291, 315, 418, 1125, 2690, 3248 |
| SacI | GAGCTC | 5 cut(s) | 1449, 1799, 3761, 3863, 3929 |
| SaqAI | TTAA | 9 cut(s) | 15, 230, 914, 1458, 1967, 2172, 2249, 2637, 2658 |
| SchI | GAGTC | 6 cut(s) | 188, 605, 982, 1752, 3508, 3856 |
| SduI | GDGCHC | 9 cut(s) | 1342, 1449, 1799, 2195, 2739, 3558, 3761, 3863, 3929 |
| SexAI | ACCWGGT | 1 cut(s) | 35 |
| SfcI | CTRYAG | 8 cut(s) | 204, 1215, 1374, 1725, 2343, 2568, 3728, 3996 |
| SfuI | TTCGAA | 1 cut(s) | 2156 |
| SinI | GGWCC | 9 cut(s) | 505, 1006, 1019, 1167, 1730, 3198, 3433, 3563, 3973 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 291, 315, 418, 1125, 2690, 3248 |
| SmlI | CTYRAG | 2 cut(s) | 913, 2730 |
| SmoI | CTYRAG | 2 cut(s) | 913, 2730 |
| SphI | GCATGC | 1 cut(s) | 2020 |
| SseBI | AGGCCT | 1 cut(s) | 2717 |
| SspI | AATATT | 2 cut(s) | 1597, 3589 |
| SspMI | CTAG | 4 cut(s) | 635, 2100, 2384, 3813 |
| SstI | GAGCTC | 5 cut(s) | 1449, 1799, 3761, 3863, 3929 |
| StuI | AGGCCT | 1 cut(s) | 2717 |
| StyI | CCWWGG | 7 cut(s) | 862, 1009, 1404, 1585, 2356, 3243, 3558 |
| TaaI | ACNGT | 8 cut(s) | 748, 1383, 1678, 2053, 2344, 2448, 2613, 3048 |
| TaiI | ACGT | 4 cut(s) | 78, 96, 230, 3038 |
| TaqI | TCGA | 5 cut(s) | 430, 1892, 2156, 2201, 3038 |
| TaqII | GACCGA | 1 cut(s) | 1177 |
| TatI | WGTACW | 2 cut(s) | 399, 3043 |
| TauI | GCSGC | 1 cut(s) | 467 |
| TfiI | GAWTC | 9 cut(s) | 353, 670, 827, 834, 1252, 1345, 1844, 2180, 2780 |
| Tru1I | TTAA | 9 cut(s) | 15, 230, 914, 1458, 1967, 2172, 2249, 2637, 2658 |
| Tru9I | TTAA | 9 cut(s) | 15, 230, 914, 1458, 1967, 2172, 2249, 2637, 2658 |
| TscAI | CASTG | 7 cut(s) | 528, 1347, 1456, 1650, 1840, 1948, 2463 |
| TseFI | GTSAC | 3 cut(s) | 519, 1137, 2047 |
| Tsp45I | GTSAC | 3 cut(s) | 519, 1137, 2047 |
| TspGWI | ACGGA | 5 cut(s) | 32, 498, 727, 1900, 2085 |
| TspRI | CASTG | 7 cut(s) | 528, 1347, 1456, 1650, 1840, 1948, 2463 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2336 |
| Vha464I | CTTAAG | 1 cut(s) | 913 |
| VpaK11BI | GGWCC | 9 cut(s) | 505, 1006, 1019, 1167, 1730, 3198, 3433, 3563, 3973 |
| VspI | ATTAAT | 1 cut(s) | 2637 |
| XbaI | TCTAGA | 1 cut(s) | 634 |
| XceI | RCATGY | 3 cut(s) | 2020, 2521, 3427 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 649, 2422 |
| XmiI | GTMKAC | 1 cut(s) | 709 |
| XspI | CTAG | 4 cut(s) | 635, 2100, 2384, 3813 |
| ZraI | GACGTC | 1 cut(s) | 3036 |
| Zsp2I | ATGCAT | 2 cut(s) | 2653, 4009 |