No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01130 AT3G01130 AT3G01130 AT3G01130 AT3G01130 AT3G01130 AT3G01130 AT3G01130 AT5G15320 AT5G15320 |
| fragaria_vesca | FvH4_2g40200 FvH4_2g40204 FvH4_6g42921 |
| malus_domestica | MD00G1066700.v1.1 MD10G1061700.v1.1 |
| prunus_persica | Prupe.1G368600_v2.0.a1 Prupe.8G082400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0268521 RchiOBHm_Chr6g0302511 |
| rosa_laevigata | RLG00000033803 |
| rosa_roxburghii | Rroxscaffold_7G00165700 Rroxscaffold_7G00199760 |
| rosa_rugosa | Rorug06G0314700 |
| rosa_samantha | Rh6AG427900 Rh6BG474800 Rh6CG440000 Rh6DG427000 |
| rosa_wichuraiana | Rw6G014000 Rw6G037010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 72 |
| AccI | GTMKAC | 2 cut(s) | 33, 234 |
| AccIII | TCCGGA | 1 cut(s) | 190 |
| AciI | CCGC | 1 cut(s) | 140 |
| AcyI | GRCGYC | 1 cut(s) | 69 |
| AgsI | TTSAA | 1 cut(s) | 364 |
| AluBI | AGCT | 2 cut(s) | 306, 350 |
| AluI | AGCT | 2 cut(s) | 306, 350 |
| Alw21I | GWGCWC | 1 cut(s) | 200 |
| Aor13HI | TCCGGA | 1 cut(s) | 190 |
| ApeKI | GCWGC | 1 cut(s) | 306 |
| Bbv12I | GWGCWC | 1 cut(s) | 200 |
| BbvI | GCAGC | 1 cut(s) | 293 |
| BceAI | ACGGC | 2 cut(s) | 212, 322 |
| BisI | GCNGC | 2 cut(s) | 141, 307 |
| BlsI | GCNGC | 2 cut(s) | 142, 308 |
| BmrI | ACTGGG | 1 cut(s) | 282 |
| BmuI | ACTGGG | 1 cut(s) | 282 |
| BsaHI | GRCGYC | 1 cut(s) | 69 |
| BsaJI | CCNNGG | 2 cut(s) | 107, 338 |
| BsaWI | WCCGGW | 1 cut(s) | 190 |
| Bse1I | ACTGG | 1 cut(s) | 277 |
| Bse3DI | GCAATG | 1 cut(s) | 256 |
| BseAI | TCCGGA | 1 cut(s) | 190 |
| BseDI | CCNNGG | 2 cut(s) | 107, 338 |
| BseMI | GCAATG | 1 cut(s) | 256 |
| BseNI | ACTGG | 1 cut(s) | 277 |
| BseRI | GAGGAG | 1 cut(s) | 275 |
| BseXI | GCAGC | 1 cut(s) | 293 |
| BsiHKAI | GWGCWC | 1 cut(s) | 200 |
| BsiSI | CCGG | 1 cut(s) | 191 |
| Bsp1286I | GDGCHC | 1 cut(s) | 200 |
| Bsp13I | TCCGGA | 1 cut(s) | 190 |
| Bsp143I | GATC | 1 cut(s) | 286 |
| BspACI | CCGC | 1 cut(s) | 140 |
| BspEI | TCCGGA | 1 cut(s) | 190 |
| BsrDI | GCAATG | 1 cut(s) | 256 |
| BsrI | ACTGG | 1 cut(s) | 277 |
| BssECI | CCNNGG | 2 cut(s) | 107, 338 |
| BssMI | GATC | 1 cut(s) | 286 |
| BssNI | GRCGYC | 1 cut(s) | 69 |
| Bst6I | CTCTTC | 2 cut(s) | 137, 252 |
| BstACI | GRCGYC | 1 cut(s) | 69 |
| BstC8I | GCNNGC | 1 cut(s) | 348 |
| BstDSI | CCRYGG | 1 cut(s) | 338 |
| BstKTI | GATC | 1 cut(s) | 289 |
| BstMBI | GATC | 1 cut(s) | 286 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 343, 352 |
| BstV1I | GCAGC | 1 cut(s) | 293 |
| BtgI | CCRYGG | 1 cut(s) | 338 |
| BtsIMutI | CAGTG | 1 cut(s) | 50 |
| Cac8I | GCNNGC | 1 cut(s) | 348 |
| CseI | GACGC | 1 cut(s) | 304 |
| CviAII | CATG | 1 cut(s) | 290 |
| CviJI | RGCY | 5 cut(s) | 112, 143, 306, 337, 350 |
| CviKI_1 | RGCY | 5 cut(s) | 112, 143, 306, 337, 350 |
| DpnI | GATC | 1 cut(s) | 288 |
| DpnII | GATC | 1 cut(s) | 286 |
| Eam1104I | CTCTTC | 2 cut(s) | 137, 252 |
| EarI | CTCTTC | 2 cut(s) | 137, 252 |
| FaeI | CATG | 1 cut(s) | 293 |
| FaiI | YATR | 4 cut(s) | 138, 213, 242, 291 |
| FatI | CATG | 1 cut(s) | 289 |
| FblI | GTMKAC | 2 cut(s) | 33, 234 |
| Fnu4HI | GCNGC | 2 cut(s) | 141, 307 |
| Fsp4HI | GCNGC | 2 cut(s) | 141, 307 |
| GluI | GCNGC | 2 cut(s) | 141, 307 |
| HapII | CCGG | 1 cut(s) | 191 |
| HgaI | GACGC | 1 cut(s) | 304 |
| Hin1I | GRCGYC | 1 cut(s) | 69 |
| Hin1II | CATG | 1 cut(s) | 293 |
| HincII | GTYRAC | 1 cut(s) | 34 |
| HindII | GTYRAC | 1 cut(s) | 34 |
| HinfI | GANTC | 2 cut(s) | 30, 367 |
| HpaII | CCGG | 1 cut(s) | 191 |
| Hpy166II | GTNNAC | 2 cut(s) | 34, 235 |
| Hpy188I | TCNGA | 1 cut(s) | 202 |
| Hpy188III | TCNNGA | 2 cut(s) | 191, 364 |
| Hpy8I | GTNNAC | 2 cut(s) | 34, 235 |
| Hpy99I | CGWCG | 7 cut(s) | 16, 38, 71, 74, 104, 127, 233 |
| HpyCH4IV | ACGT | 2 cut(s) | 69, 99 |
| HpyCH4V | TGCA | 1 cut(s) | 244 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 343, 352 |
| HpySE526I | ACGT | 2 cut(s) | 69, 99 |
| Hsp92I | GRCGYC | 1 cut(s) | 69 |
| Hsp92II | CATG | 1 cut(s) | 293 |
| Kpn2I | TCCGGA | 1 cut(s) | 190 |
| Kzo9I | GATC | 1 cut(s) | 286 |
| LmnI | GCTCC | 2 cut(s) | 203, 303 |
| LpnPI | CCDG | 5 cut(s) | 42, 204, 258, 347, 360 |
| Lsp1109I | GCAGC | 1 cut(s) | 293 |
| MaeII | ACGT | 2 cut(s) | 69, 99 |
| MaeIII | GTNAC | 2 cut(s) | 82, 292 |
| MalI | GATC | 1 cut(s) | 288 |
| MboI | GATC | 1 cut(s) | 286 |
| MboII | GAAGA | 3 cut(s) | 124, 269, 352 |
| MhlI | GDGCHC | 1 cut(s) | 200 |
| MlyI | GAGTC | 1 cut(s) | 39 |
| MmeI | TCCRAC | 1 cut(s) | 225 |
| MnlI | CCTC | 5 cut(s) | 32, 117, 140, 253, 337 |
| MroI | TCCGGA | 1 cut(s) | 190 |
| MseI | TTAA | 1 cut(s) | 149 |
| MspI | CCGG | 1 cut(s) | 191 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 343, 352 |
| NdeII | GATC | 1 cut(s) | 286 |
| NlaIII | CATG | 1 cut(s) | 293 |
| NmeAIII | GCCGAG | 1 cut(s) | 88 |
| NmuCI | GTSAC | 2 cut(s) | 82, 292 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 75 |
| PfeI | GAWTC | 1 cut(s) | 367 |
| PkrI | GCNGC | 2 cut(s) | 142, 308 |
| PleI | GAGTC | 1 cut(s) | 38 |
| PpsI | GAGTC | 1 cut(s) | 38 |
| SalI | GTCGAC | 1 cut(s) | 32 |
| SaqAI | TTAA | 1 cut(s) | 149 |
| SatI | GCNGC | 2 cut(s) | 141, 307 |
| Sau3AI | GATC | 1 cut(s) | 286 |
| SchI | GAGTC | 1 cut(s) | 39 |
| SduI | GDGCHC | 1 cut(s) | 200 |
| SetI | ASST | 5 cut(s) | 72, 102, 308, 329, 352 |
| SsiI | CCGC | 1 cut(s) | 140 |
| TaiI | ACGT | 2 cut(s) | 72, 102 |
| TaqI | TCGA | 1 cut(s) | 33 |
| TauI | GCSGC | 1 cut(s) | 143 |
| TfiI | GAWTC | 1 cut(s) | 367 |
| Tru1I | TTAA | 1 cut(s) | 149 |
| Tru9I | TTAA | 1 cut(s) | 149 |
| TscAI | CASTG | 1 cut(s) | 57 |
| TseFI | GTSAC | 2 cut(s) | 82, 292 |
| TseI | GCWGC | 1 cut(s) | 306 |
| Tsp45I | GTSAC | 2 cut(s) | 82, 292 |
| TspDTI | ATGAA | 1 cut(s) | 359 |
| TspGWI | ACGGA | 2 cut(s) | 51, 198 |
| TspRI | CASTG | 1 cut(s) | 57 |
| XmiI | GTMKAC | 2 cut(s) | 33, 234 |
| ZraI | GACGTC | 1 cut(s) | 70 |