Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0015677

Physical Location & Seq

Genomic Coordinates Forward (+)

36914006 .. 36917388

Gene Structure 3383 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g49170.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGGCGGAGATACCGCCACCGCCGACGGTGAATCAGATTCCAAGCTCGCCGTGGCCGGCGACGCACATGACCGACGTGGATGAAGACGCCTTGGCTCACTGCACCAGCTTCCTAAGCCTCCAGGACGTCTCCAACATGGCCATGACCTGCAAGTACCTCCAAAAAGTCGCCTACTCCGACTCTATCTGGCGCAGAAACTTCAGTGAGAGTTGGCCGCAGCAAACACCTGCATTTGCTTCGCCGGCGTCAGGAGTTAGGGAAGCGTACTTACGGCGGCGCACGGATTTGCTGCAGTTCAAGTTTTCGGATCCGGTTGTCGCCGATTTCGTCACAGATACAAAGCCTGTTGACCACATTTTATTGAATGAGAAACAGATAATCTTCTCTAAGGGTCCGGTGATACAAGTGATAAAGATTGATGACTGGTTAAGTGGGAGGGATTCGGTTGTCACACTAAGTGATCACAGTGCAAGGATTACTTGTATGAGACTGTTTTCACTTAATGAAACATCTTTATATCGAAGTGAAGAACAAAGGAAAGAGAATGTTTTGGTCACTTCAAGCTCTGATCATTGTATCCGGCTATGGTGGAAGGGTTCTTGCCGACGATGTTTAACAGGTCACAGAGGCTCAGTTACAGCCCTGTCTGATAAATTGCTAGGCAATGGTACTGGAAAAGTATTGGCAAGTGGAGGGGAAGATGGCACAGTTCGCCTTTGGTCTCTTAGTTCCAGTGGAAGACGTGGCAAGTATGCTTTAAAGGCTACTTTCTATGGACATCAGAAACCCATCAAATTGATGTCAGTTGCTGGGCATAAAACTTCTATTTTGGTAACTGTTACAGGAGATTCTAAGGTGAGGTTATGGGATGCAGCTTCACAGTCTGCTGTTCCTTCTTCATCTTGTGTGGGAATGACTTCAGTTCCTGGTCCCCTTGTAAACATGAAGTGCCATGAACAGTTGCTCTATCTTGCCGCCGGTTCCTCTGTTGTTGTAATCGATCTGAGGACAATGCGACAAGTTATCTCATATTCTATAGATGAAAAATTATATTCTTTTGAGGCCATTCCTTCAAAATCCTTATTCTGCGTAGGCAGTAACAATGGCAGAGCGATGCTTTACGATATCAGGAGGGTCAAGCTTTACAACTCGAAAGCAGAACTAGTAACTGAGTTGGATGGTGGACACACTGGGCCCTTAACTCACTTGCACATGGATCCGTACAAAATTGTTACAGGAGGCCGTGGCAGGGAAGACTCTCATGTTAATGTTTGGGAATCCAACACTGGTGCGCTCATCAGTTCCTTAACTTGTGATATGGAGGAAGCCAGTATGGATGCCCTAGCTGTAAATGGGTGTCGAATTGTTACTGCCAACACTAGCCATTTGGAAAATTCGGGAGTTCTACGCTATAGGGACTTCAACAATGCTTCATGTCCTGCAGTTAATAGAGAAGGTGGCCATCTTTCAAAGTTTTGGAATCCACAATCTTATAGTGATAGTGAGACTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000428 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005737 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010604 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0016604 GO:0016607 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0030914 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0033276 GO:0035770 GO:0036211 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070461 GO:0071704 GO:0071840 GO:0080090 GO:0090575 GO:0140110 GO:1901564 GO:1902493 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:1990904 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

F-box F-box-like WD40

Protein Analysis

505

Amino Acids

55.61

Weight (kDa)

7.94

Isoelectric Point (pI)

43.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	148 - 298	3.9e-10	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	178 - 426	1.5e-15	WDR5 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	181 - 294	3.6e-06	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	182 - 292	2.9e-08	WDR3 second beta-propeller domain
Beta-prop_SCAP	PF24017	184 - 293	5.4e-06	SCAP Beta-propeller
WD40	PF00400	199 - 241	1.7e-07	WD domain, G-beta repeat
Beta-prop_WDR3_1st	PF25173	199 - 297	5.9e-10	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	222 - 437	3.9e-22	THOC3 beta-propeller domain
WD40_Prp19	PF24814	225 - 440	1.4e-11	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015677)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g49170
malus_domestica	MD09G1047900.v1.1 MD17G1048000.v1.1 MD17G1048100.v1.1
prunus_persica	Prupe.3G271100_v2.0.a1
pyrus_communis	pycom17g04280
rosa_chinensis	RchiOBHm_Chr2g0169041
rosa_laevigata	RLG00000021826
rosa_multiflora	Rmu_ssc0000393.1_g000025
rosa_roxburghii	Rroxscaffold_2G00082510
rosa_rugosa	Rorug02G0536500
rosa_samantha	Rh2AG608000 Rh2BG620700 Rh2CG589600 Rh2DG631300
rosa_wichuraiana	Rw2G050420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	235
AatII	GACGTC	1 cut(s)	129
Acc36I	ACCTGC	2 cut(s)	155, 235
AciI	CCGC	6 cut(s)	5, 14, 20, 215, 274, 975
AclWI	GGATC	4 cut(s)	302, 315, 1211, 1224
AcoI	YGGCCR	4 cut(s)	53, 138, 212, 1459
AcsI	RAATTY	1 cut(s)	1393
AcuI	CTGAAG	2 cut(s)	184, 903
AcyI	GRCGYC	3 cut(s)	87, 126, 245
AdeI	CACNNNGTG	1 cut(s)	458
AfaI	GTAC	4 cut(s)	155, 266, 670, 1223
AfiI	CCNNNNNNNGG	2 cut(s)	248, 1249
AgsI	TTSAA	6 cut(s)	298, 364, 561, 1074, 1423, 1470
AhlI	ACTAGT	1 cut(s)	1162
AjiI	CACGTC	2 cut(s)	76, 743
AjnI	CCWGG	2 cut(s)	120, 925
AluBI	AGCT	6 cut(s)	45, 108, 564, 875, 1141, 1346
AluI	AGCT	6 cut(s)	45, 108, 564, 875, 1141, 1346
Alw26I	GTCTC	4 cut(s)	133, 481, 726, 1499
AlwI	GGATC	4 cut(s)	302, 315, 1211, 1224
AlwNI	CAGNNNCTG	2 cut(s)	809, 926
AoxI	GGCC	7 cut(s)	53, 138, 212, 1062, 1193, 1240, 1459
ApaI	GGGCCC	1 cut(s)	1197
ApeKI	GCWGC	3 cut(s)	217, 289, 872
ApoI	RAATTY	1 cut(s)	1393
Asp700I	GAANNNNTTC	1 cut(s)	916
AspLEI	GCGC	3 cut(s)	192, 279, 1294
AspS9I	GGNCC	4 cut(s)	392, 929, 1193, 1194
AsuHPI	GGTGA	3 cut(s)	40, 409, 868
AvaII	GGWCC	2 cut(s)	392, 929
BaeGI	GKGCMC	1 cut(s)	1197
BalI	TGGCCA	2 cut(s)	140, 1461
BamHI	GGATCC	2 cut(s)	307, 1216
BanII	GRGCYC	1 cut(s)	1197
BarI	GAAGNNNNNNTAC	2 cut(s)	252, 284
BbsI	GAAGAC	3 cut(s)	90, 745, 1260
BbvI	GCAGC	3 cut(s)	229, 276, 884
BccI	CCATC	4 cut(s)	695, 797, 1172, 1470
BceAI	ACGGC	3 cut(s)	34, 287, 1227
BcgI	CGANNNNNNTGC	2 cut(s)	219, 253
BciT130I	CCWGG	2 cut(s)	122, 927
BciVI	GTATCC	1 cut(s)	587
BclI	TGATCA	2 cut(s)	460, 568
BcoDI	GTCTC	4 cut(s)	133, 481, 726, 1499
BcuI	ACTAGT	1 cut(s)	1162
BfaI	CTAG	4 cut(s)	659, 1163, 1343, 1380
BfmI	CTRYAG	4 cut(s)	290, 1035, 1411, 1440
BfuAI	ACCTGC	2 cut(s)	155, 235
BfuI	GTATCC	1 cut(s)	587
BisI	GCNGC	6 cut(s)	215, 218, 275, 290, 873, 975
BlsI	GCNGC	6 cut(s)	216, 219, 276, 291, 874, 976
Bme1390I	CCNGG	2 cut(s)	122, 927
Bme18I	GGWCC	2 cut(s)	392, 929
BmgBI	CACGTC	2 cut(s)	76, 743
BmgT120I	GGNCC	4 cut(s)	392, 929, 1193, 1194
BmiI	GGNNCC	6 cut(s)	309, 393, 931, 982, 1195, 1218
BmrFI	CCNGG	2 cut(s)	122, 927
BmrI	ACTGGG	1 cut(s)	1200
BmsI	GCATC	3 cut(s)	859, 1104, 1327
BmuI	ACTGGG	1 cut(s)	1200
BpiI	GAAGAC	3 cut(s)	90, 745, 1260
BpmI	CTGGAG	1 cut(s)	104
Bpu10I	CCTNAGC	1 cut(s)	113
Bsa29I	ATCGAT	1 cut(s)	999
BsaHI	GRCGYC	3 cut(s)	87, 126, 245
BsaI	GGTCTC	1 cut(s)	726
BsaJI	CCNNGG	3 cut(s)	50, 90, 1243
BsaWI	WCCGGW	2 cut(s)	310, 394
Bsc4I	CCNNNNNNNGG	2 cut(s)	248, 1249
Bse118I	RCCGGY	3 cut(s)	55, 241, 977
Bse1I	ACTGG	6 cut(s)	428, 676, 732, 1195, 1291, 1329
Bse3DI	GCAATG	1 cut(s)	670
BseBI	CCWGG	2 cut(s)	122, 927
BseCI	ATCGAT	1 cut(s)	999
BseDI	CCNNGG	3 cut(s)	50, 90, 1243
BseGI	GGATG	4 cut(s)	85, 874, 1183, 1342
BseLI	CCNNNNNNNGG	2 cut(s)	248, 1249
BseMI	GCAATG	1 cut(s)	670
BseMII	CTCAG	3 cut(s)	645, 995, 1161
BseNI	ACTGG	6 cut(s)	428, 676, 732, 1195, 1291, 1329
BseSI	GKGCMC	1 cut(s)	1197
BseXI	GCAGC	3 cut(s)	229, 276, 884
BseYI	CCCAGC	1 cut(s)	809
BsgI	GTGCAG	1 cut(s)	85
BshFI	GGCC	7 cut(s)	55, 140, 214, 1064, 1195, 1242, 1461
BshVI	ATCGAT	1 cut(s)	999
BsiSI	CCGG	6 cut(s)	56, 242, 311, 395, 580, 978
BslFI	GGGAC	2 cut(s)	915, 1430
BslI	CCNNNNNNNGG	2 cut(s)	248, 1249
BsmAI	GTCTC	4 cut(s)	133, 481, 726, 1499
BsmBI	CGTCTC	1 cut(s)	133
BsmFI	GGGAC	2 cut(s)	915, 1430
BsnI	GGCC	7 cut(s)	55, 140, 214, 1064, 1195, 1242, 1461
Bso31I	GGTCTC	1 cut(s)	726
Bsp120I	GGGCCC	1 cut(s)	1193
Bsp1286I	GDGCHC	1 cut(s)	1197
Bsp143I	GATC	5 cut(s)	307, 460, 568, 1000, 1216
BspACI	CCGC	6 cut(s)	5, 14, 20, 215, 274, 975
BspANI	GGCC	7 cut(s)	55, 140, 214, 1064, 1195, 1242, 1461
BspCNI	CTCAG	3 cut(s)	644, 996, 1162
BspDI	ATCGAT	1 cut(s)	999
BspLI	GGNNCC	6 cut(s)	309, 393, 931, 982, 1195, 1218
BspMAI	CTGCAG	2 cut(s)	294, 1444
BspMI	ACCTGC	2 cut(s)	155, 235
BspPI	GGATC	4 cut(s)	302, 315, 1211, 1224
BspTNI	GGTCTC	1 cut(s)	726
BsrDI	GCAATG	1 cut(s)	670
BsrFI	RCCGGY	3 cut(s)	55, 241, 977
BsrI	ACTGG	6 cut(s)	428, 676, 732, 1195, 1291, 1329
BssAI	RCCGGY	3 cut(s)	55, 241, 977
BssECI	CCNNGG	3 cut(s)	50, 90, 1243
BssMI	GATC	5 cut(s)	307, 460, 568, 1000, 1216
BssNI	GRCGYC	3 cut(s)	87, 126, 245
BssT1I	CCWWGG	1 cut(s)	90
Bst2UI	CCWGG	2 cut(s)	122, 927
Bst4CI	ACNGT	7 cut(s)	28, 467, 492, 709, 838, 882, 960
BstACI	GRCGYC	3 cut(s)	87, 126, 245
BstC8I	GCNNGC	3 cut(s)	47, 57, 243
BstDEI	CTNAG	8 cut(s)	113, 387, 455, 631, 725, 852, 1004, 1170
BstDSI	CCRYGG	2 cut(s)	50, 1243
BstF5I	GGATG	4 cut(s)	85, 874, 1183, 1342
BstHHI	GCGC	3 cut(s)	192, 279, 1294
BstKTI	GATC	5 cut(s)	310, 463, 571, 1003, 1219
BstMAI	GTCTC	4 cut(s)	133, 481, 726, 1499
BstMBI	GATC	5 cut(s)	307, 460, 568, 1000, 1216
BstMWI	GCNNNNNNNGC	5 cut(s)	61, 114, 242, 711, 761
BstNI	CCWGG	2 cut(s)	122, 927
BstSCI	CCNGG	2 cut(s)	120, 925
BstSFI	CTRYAG	4 cut(s)	290, 1035, 1411, 1440
BstSLI	GKGCMC	1 cut(s)	1197
BstV1I	GCAGC	3 cut(s)	229, 276, 884
BstV2I	GAAGAC	3 cut(s)	90, 745, 1260
BstX2I	RGATCY	2 cut(s)	307, 1216
BstYI	RGATCY	2 cut(s)	307, 1216
Bsu15I	ATCGAT	1 cut(s)	999
BsuI	GTATCC	1 cut(s)	587
BsuRI	GGCC	7 cut(s)	55, 140, 214, 1064, 1195, 1242, 1461
BsuTUI	ATCGAT	1 cut(s)	999
BtgI	CCRYGG	2 cut(s)	50, 1243
BtgZI	GCGATG	1 cut(s)	1127
BtrI	CACGTC	2 cut(s)	76, 743
BtsCI	GGATG	4 cut(s)	85, 874, 1183, 1342
BtsI	GCAGTG	1 cut(s)	97
BtsIMutI	CAGTG	6 cut(s)	97, 208, 472, 739, 1188, 1284
BveI	ACCTGC	2 cut(s)	155, 235
Cac8I	GCNNGC	3 cut(s)	47, 57, 243
CaiI	CAGNNNCTG	2 cut(s)	809, 926
CfoI	GCGC	3 cut(s)	192, 279, 1294
Cfr10I	RCCGGY	3 cut(s)	55, 241, 977
Cfr13I	GGNCC	4 cut(s)	392, 929, 1193, 1194
ClaI	ATCGAT	1 cut(s)	999
CseI	GACGC	3 cut(s)	70, 95, 234
Csp6I	GTAC	4 cut(s)	154, 265, 669, 1222
CviAII	CATG	8 cut(s)	67, 136, 142, 943, 953, 1213, 1262, 1434
CviQI	GTAC	4 cut(s)	154, 265, 669, 1222
DdeI	CTNAG	8 cut(s)	113, 387, 455, 631, 725, 852, 1004, 1170
DpnI	GATC	5 cut(s)	309, 462, 570, 1002, 1218
DpnII	GATC	5 cut(s)	307, 460, 568, 1000, 1216
DraI	TTTAAA	1 cut(s)	759
DraIII	CACNNNGTG	1 cut(s)	458
EaeI	YGGCCR	4 cut(s)	53, 138, 212, 1459
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	1 cut(s)	90
Eco24I	GRGCYC	1 cut(s)	1197
Eco31I	GGTCTC	1 cut(s)	726
Eco32I	GATATC	1 cut(s)	1126
Eco47I	GGWCC	2 cut(s)	392, 929
Eco57I	CTGAAG	2 cut(s)	184, 903
EcoO109I	RGGNCCY	1 cut(s)	1194
EcoRII	CCWGG	2 cut(s)	120, 925
EcoRV	GATATC	1 cut(s)	1126
EcoT14I	CCWWGG	1 cut(s)	90
EcoT38I	GRGCYC	1 cut(s)	1197
ErhI	CCWWGG	1 cut(s)	90
Esp3I	CGTCTC	1 cut(s)	133
FaeI	CATG	8 cut(s)	70, 139, 145, 946, 956, 1216, 1265, 1437
FalI	AAGNNNNNCTT	2 cut(s)	463, 495
FaqI	GGGAC	2 cut(s)	915, 1430
FatI	CATG	8 cut(s)	66, 135, 141, 942, 952, 1212, 1261, 1433
FbaI	TGATCA	2 cut(s)	460, 568
Fnu4HI	GCNGC	6 cut(s)	215, 218, 275, 290, 873, 975
FokI	GGATG	4 cut(s)	92, 881, 1190, 1349
FriOI	GRGCYC	1 cut(s)	1197
Fsp4HI	GCNGC	6 cut(s)	215, 218, 275, 290, 873, 975
FspBI	CTAG	4 cut(s)	659, 1163, 1343, 1380
GlaI	GCGC	3 cut(s)	191, 278, 1293
GluI	GCNGC	6 cut(s)	215, 218, 275, 290, 873, 975
GsaI	CCCAGC	1 cut(s)	813
GsuI	CTGGAG	1 cut(s)	104
HaeIII	GGCC	7 cut(s)	55, 140, 214, 1064, 1195, 1242, 1461
HapII	CCGG	6 cut(s)	56, 242, 311, 395, 580, 978
HgaI	GACGC	3 cut(s)	70, 95, 234
HhaI	GCGC	3 cut(s)	192, 279, 1294
Hin1I	GRCGYC	3 cut(s)	87, 126, 245
Hin1II	CATG	8 cut(s)	70, 139, 145, 946, 956, 1216, 1265, 1437
Hin6I	GCGC	3 cut(s)	190, 277, 1292
HinP1I	GCGC	3 cut(s)	190, 277, 1292
HincII	GTYRAC	1 cut(s)	349
HindII	GTYRAC	1 cut(s)	349
HindIII	AAGCTT	1 cut(s)	1139
HinfI	GANTC	8 cut(s)	31, 37, 179, 440, 848, 1256, 1277, 1480
HpaII	CCGG	6 cut(s)	56, 242, 311, 395, 580, 978
HphI	GGTGA	3 cut(s)	40, 409, 868
Hpy166II	GTNNAC	3 cut(s)	349, 940, 1184
Hpy188I	TCNGA	7 cut(s)	36, 178, 307, 568, 649, 783, 1005
Hpy188III	TCNNGA	3 cut(s)	249, 1129, 1398
Hpy8I	GTNNAC	3 cut(s)	349, 940, 1184
Hpy99I	CGWCG	4 cut(s)	28, 64, 77, 609
HpyAV	CCTTC	4 cut(s)	586, 903, 1080, 1448
HpyCH4III	ACNGT	7 cut(s)	28, 467, 492, 709, 838, 882, 960
HpyCH4IV	ACGT	3 cut(s)	75, 126, 742
HpyCH4V	TGCA	8 cut(s)	102, 150, 230, 292, 470, 872, 1210, 1442
HpyF10VI	GCNNNNNNNGC	5 cut(s)	61, 114, 242, 711, 761
HpyF3I	CTNAG	8 cut(s)	113, 387, 455, 631, 725, 852, 1004, 1170
HpySE526I	ACGT	3 cut(s)	75, 126, 742
Hsp92I	GRCGYC	3 cut(s)	87, 126, 245
Hsp92II	CATG	8 cut(s)	70, 139, 145, 946, 956, 1216, 1265, 1437
HspAI	GCGC	3 cut(s)	190, 277, 1292
KroI	GCCGGC	2 cut(s)	55, 241
KroNI	GCCGGC	2 cut(s)	57, 243
Ksp22I	TGATCA	2 cut(s)	460, 568
Kzo9I	GATC	5 cut(s)	307, 460, 568, 1000, 1216
Lsp1109I	GCAGC	3 cut(s)	229, 276, 884
LweI	GCATC	3 cut(s)	859, 1104, 1327
MaeI	CTAG	4 cut(s)	659, 1163, 1343, 1380
MaeII	ACGT	3 cut(s)	75, 126, 742
MalI	GATC	5 cut(s)	309, 462, 570, 1002, 1218
MboI	GATC	5 cut(s)	307, 460, 568, 1000, 1216
MboII	GAAGA	7 cut(s)	95, 373, 539, 710, 750, 888, 1265
MflI	RGATCY	2 cut(s)	307, 1216
MhlI	GDGCHC	1 cut(s)	1197
MlsI	TGGCCA	2 cut(s)	140, 1461
MluCI	AATT	6 cut(s)	653, 794, 1046, 1227, 1362, 1393
MluNI	TGGCCA	2 cut(s)	140, 1461
MlyI	GAGTC	2 cut(s)	173, 1250
MmeI	TCCRAC	4 cut(s)	156, 201, 1155, 1305
Mox20I	TGGCCA	2 cut(s)	140, 1461
MreI	CGCCGGCG	1 cut(s)	241
MroNI	GCCGGC	2 cut(s)	55, 241
MroXI	GAANNNNTTC	1 cut(s)	916
MscI	TGGCCA	2 cut(s)	140, 1461
MseI	TTAA	8 cut(s)	428, 501, 614, 758, 1199, 1266, 1307, 1446
MslI	CAYNNNNRTG	2 cut(s)	140, 1266
Msp20I	TGGCCA	2 cut(s)	140, 1461
MspI	CCGG	6 cut(s)	56, 242, 311, 395, 580, 978
MspR9I	CCNGG	2 cut(s)	122, 927
MvaI	CCWGG	2 cut(s)	122, 927
MwoI	GCNNNNNNNGC	5 cut(s)	61, 114, 242, 711, 761
NaeI	GCCGGC	2 cut(s)	57, 243
NdeII	GATC	5 cut(s)	307, 460, 568, 1000, 1216
NgoMIV	GCCGGC	2 cut(s)	55, 241
NlaIII	CATG	8 cut(s)	70, 139, 145, 946, 956, 1216, 1265, 1437
NlaIV	GGNNCC	6 cut(s)	309, 393, 931, 982, 1195, 1218
NmuCI	GTSAC	4 cut(s)	328, 448, 553, 620
PaqCI	CACCTGC	1 cut(s)	235
PcsI	WCGNNNNNNNCGW	2 cut(s)	174, 324
PdiI	GCCGGC	2 cut(s)	57, 243
PdmI	GAANNNNTTC	1 cut(s)	916
PfeI	GAWTC	6 cut(s)	31, 37, 440, 848, 1277, 1480
PfoI	TCCNGGA	1 cut(s)	120
PkrI	GCNGC	6 cut(s)	216, 219, 276, 291, 874, 976
PleI	GAGTC	2 cut(s)	173, 1250
PpsI	GAGTC	2 cut(s)	173, 1250
Psp6I	CCWGG	2 cut(s)	120, 925
PspFI	CCCAGC	1 cut(s)	809
PspGI	CCWGG	2 cut(s)	120, 925
PspN4I	GGNNCC	6 cut(s)	309, 393, 931, 982, 1195, 1218
PspOMI	GGGCCC	1 cut(s)	1193
PspPI	GGNCC	4 cut(s)	392, 929, 1193, 1194
PstI	CTGCAG	2 cut(s)	294, 1444
PstNI	CAGNNNCTG	2 cut(s)	809, 926
PsuI	RGATCY	2 cut(s)	307, 1216
RsaI	GTAC	4 cut(s)	155, 266, 670, 1223
RsaNI	GTAC	4 cut(s)	154, 265, 669, 1222
RseI	CAYNNNNRTG	2 cut(s)	140, 1266
SaqAI	TTAA	8 cut(s)	428, 501, 614, 758, 1199, 1266, 1307, 1446
SatI	GCNGC	6 cut(s)	215, 218, 275, 290, 873, 975
Sau3AI	GATC	5 cut(s)	307, 460, 568, 1000, 1216
Sau96I	GGNCC	4 cut(s)	392, 929, 1193, 1194
SchI	GAGTC	2 cut(s)	173, 1250
ScrFI	CCNGG	2 cut(s)	122, 927
SduI	GDGCHC	1 cut(s)	1197
SfaNI	GCATC	3 cut(s)	859, 1104, 1327
SfcI	CTRYAG	4 cut(s)	290, 1035, 1411, 1440
SgrAI	CRCCGGYG	1 cut(s)	241
SinI	GGWCC	2 cut(s)	392, 929
SmiMI	CAYNNNNRTG	2 cut(s)	140, 1266
SpeI	ACTAGT	1 cut(s)	1162
Sse9I	AATT	6 cut(s)	653, 794, 1046, 1227, 1362, 1393
SsiI	CCGC	6 cut(s)	5, 14, 20, 215, 274, 975
SspMI	CTAG	4 cut(s)	659, 1163, 1343, 1380
StyD4I	CCNGG	2 cut(s)	120, 925
StyI	CCWWGG	1 cut(s)	90
TaaI	ACNGT	7 cut(s)	28, 467, 492, 709, 838, 882, 960
TaiI	ACGT	3 cut(s)	78, 129, 745
TaqI	TCGA	4 cut(s)	520, 999, 1151, 1360
TaqII	GACCGA	1 cut(s)	86
TasI	AATT	6 cut(s)	653, 794, 1046, 1227, 1362, 1393
TauI	GCSGC	3 cut(s)	217, 277, 977
TfiI	GAWTC	6 cut(s)	31, 37, 440, 848, 1277, 1480
Tru1I	TTAA	8 cut(s)	428, 501, 614, 758, 1199, 1266, 1307, 1446
Tru9I	TTAA	8 cut(s)	428, 501, 614, 758, 1199, 1266, 1307, 1446
TscAI	CASTG	6 cut(s)	104, 208, 472, 739, 1195, 1291
TseFI	GTSAC	4 cut(s)	328, 448, 553, 620
TseI	GCWGC	3 cut(s)	217, 289, 872
Tsp45I	GTSAC	4 cut(s)	328, 448, 553, 620
TspDTI	ATGAA	7 cut(s)	96, 519, 888, 959, 969, 1056, 1422
TspGWI	ACGGA	2 cut(s)	296, 1209
TspRI	CASTG	6 cut(s)	104, 208, 472, 739, 1195, 1291
VpaK11BI	GGWCC	2 cut(s)	392, 929
XapI	RAATTY	1 cut(s)	1393
XcmI	CCANNNNNNNNNTGG	1 cut(s)	48
XmnI	GAANNNNTTC	1 cut(s)	916
XspI	CTAG	4 cut(s)	659, 1163, 1343, 1380
ZraI	GACGTC	1 cut(s)	127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.