Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0015677

Physical Location & Seq

Genomic Coordinates Forward (+)

76659111 .. 76662658

Gene Structure 3548 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG589600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGACAAGTAGTTATAGCCCGTACAGTCGCATCATTTTTACGTGTCGCCTTTACCTTCCAAAACTGGTTTCTATTCTCTCACTGTTTACTGTTGTGAGCGAAATCATAGTTTCGTATCTGATATTTCCAATGGCGGAGCCATCACCACCGGCACCGCCACCGCCACCGCCGACGATGAGTGAGAACCAGAACCAGAATCAGAATCAGAATCCAAGCTCGGCGTGGCCGACGACGCACATGACTGACGTGGATGTGGACGCCTTGGCTCACTGCACCAGCTACCTTAGCCTCCAGGACGTCTCCAACATGGCCATGACCTGCAAGTACCTCCAAAAAGTCGCCTACTCCGACTCTATCTGGCGCCGCTTCTTCAGGGAGAGTTGGCCGCAGCAAATACCTGCATTTGCTTCGCCAACTTCACGAGTTAGGGAAGCGTATTTACGGCGGCGCACGGATTTGCTGCAATTCAAGTTTTCGGACCCGGTGGTTGCCGATTTCATCACAGATACAAAGCCTGTTGACCACATTTTATTGAATGAAAAGCATATAATCTTCTCTAAGGGTTCAGTGATACAAATGATAAAGATTGATGACTGGTTAAGTGGGAGGGATTCGGTTGTCACACTCAGTGATCACAGCGCAAGAATTACTTGTATGAGACTGTTTTCGCTTAATGAAACATCTTTATATCGAAGTGAAGCACAGAGGAAAGAGAATGTTTTGGTAACTTCAAGCTCCGATCATGGTATCCGGCTATGGTGGAAGGGTGCTTGCCGACGATGTTTTACAGGTCACAAAGGCTCAGTTACGGCCCTGTCTGATAAATTGTTAGGCAATGGCACTGGAAAAGTATTGGCAAGTGGAGGGGAAGATGGCACAGTTCGCCTTTGGTCTCTTACTTCCAGTGGAAGACGTGGTCAGCATGCTTTAAAGGCTACTTTCTATGGTCATGAGAAACCCATCAAATTGATGTCAGTTGCTGGGCATAAAACTTCTATTTTGGTGACTGTTACAGGAGATTCTAAGGTAAGGTTGTGGGATGCAGCTGCACAGTCTGCTGTTCCTTCTTCATCTTGTGTGGGAATGACTTCAATTCCTGGTCCCCTTATAAACATGAAGTGCCATGAACAATTGCTCTATCTTGCTGCCGGTTCCTCTGTTGCTGTAATCGATCTGAGGACAATGAGAAAAGTTCTCCCATATTCGATAGATGAAAAGCTATGTTCTTTTGATGCCATTCCTTCAAAATCCTTGTGCTGTGTTGGCAGCAGTAATGGCAGAGCGATGCTTTACGATATCAGGAGGGTCAAGCTCCCCAACTCAAAAGCAGAACCGGTAACCGAGTTGGATGGTGGACACATTGGGCCATTGACTCACTTGAACATGGATTCATACAAAATAGTTACAGGAGGCCGAGGCAGGGGAGATTCTCATGTTAATATTTGGGAGTCCAACACTGGTGCACTCGTCAGTTCCCTGACTTGTGATCTGGAGGAAGCAAGTATGGATGCCCTAGCTGTAAATGGGTGTCAAATTGTTACTGCCAACACCAGCCATATGGAAGATTCGGGAGTTCTACGCTATAGGGACTTCAGCAACGCTTCATGTCCTGCTGTTAATAGTGAAGGTGATGACCGTGTTTCAAAGTTTTGGAATCCACAATCTTATAGTGATAGTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000428 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005737 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010604 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0016604 GO:0016607 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0030914 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0033276 GO:0035770 GO:0036211 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070461 GO:0071704 GO:0071840 GO:0080090 GO:0090575 GO:0140110 GO:1901564 GO:1902493 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:1990904 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

F-box F-box-like WD40

Protein Analysis

560

Amino Acids

61.7

Weight (kDa)

8.3

Isoelectric Point (pI)

45.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	90 - 125	2.7e-06	F-box-like
WD40_CDC20-Fz	PF24807	192 - 354	1.1e-09	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	219 - 435	2e-12	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	235 - 354	2e-12	WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	237 - 351	4.5e-06	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	238 - 348	5.6e-07	WDR3 second beta-propeller domain
Beta-prop_SCAP	PF24017	241 - 349	8.9e-06	SCAP Beta-propeller
WD40	PF00400	257 - 298	1.6e-07	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	279 - 494	3e-19	THOC3 beta-propeller domain
WD40_Prp19	PF24814	282 - 482	2.6e-09	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015677)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g49170
malus_domestica	MD09G1047900.v1.1 MD17G1048000.v1.1 MD17G1048100.v1.1
prunus_persica	Prupe.3G271100_v2.0.a1
pyrus_communis	pycom17g04280
rosa_chinensis	RchiOBHm_Chr2g0169041
rosa_laevigata	RLG00000021826
rosa_multiflora	Rmu_ssc0000393.1_g000025
rosa_roxburghii	Rroxscaffold_2G00082510
rosa_rugosa	Rorug02G0536500
rosa_samantha	Rh2AG608000 Rh2BG620700 Rh2CG589600 Rh2DG631300
rosa_wichuraiana	Rw2G050420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1109
AatII	GACGTC	1 cut(s)	300
Acc36I	ACCTGC	2 cut(s)	326, 406
AccB1I	GGYRCC	2 cut(s)	151, 360
AciI	CCGC	7 cut(s)	134, 155, 161, 167, 364, 386, 445
AcoI	YGGCCR	3 cut(s)	224, 309, 383
AcuI	CTGAAG	2 cut(s)	355, 1576
AcyI	GRCGYC	3 cut(s)	258, 297, 361
AdeI	CACNNNGTG	1 cut(s)	629
AfaI	GTAC	2 cut(s)	23, 326
AfiI	CCNNNNNNNGG	1 cut(s)	1420
AflIII	ACRYGT	1 cut(s)	41
AgeI	ACCGGT	1 cut(s)	1333
AgsI	TTSAA	7 cut(s)	469, 535, 732, 1092, 1245, 1381, 1644
AjiI	CACGTC	2 cut(s)	247, 914
AjnI	CCWGG	2 cut(s)	291, 1096
AjuI	GAANNNNNNNTTGG	2 cut(s)	52, 84
AluBI	AGCT	7 cut(s)	216, 279, 735, 1046, 1219, 1312, 1517
AluI	AGCT	7 cut(s)	216, 279, 735, 1046, 1219, 1312, 1517
Alw21I	GWGCWC	1 cut(s)	1465
Alw26I	GTCTC	3 cut(s)	304, 652, 897
Alw44I	GTGCAC	1 cut(s)	1461
AlwNI	CAGNNNCTG	1 cut(s)	980
AoxI	GGCC	6 cut(s)	224, 309, 383, 810, 1364, 1411
ApaLI	GTGCAC	1 cut(s)	1461
ApeKI	GCWGC	6 cut(s)	388, 460, 1043, 1046, 1145, 1266
AsiGI	ACCGGT	1 cut(s)	1333
Asp700I	GAANNNNTTC	1 cut(s)	1087
AspLEI	GCGC	3 cut(s)	363, 450, 641
AspS9I	GGNCC	4 cut(s)	478, 811, 1100, 1364
AsuC2I	CCSGG	1 cut(s)	482
AsuHPI	GGTGA	3 cut(s)	135, 1015, 1640
AvaII	GGWCC	2 cut(s)	478, 1100
BaeGI	GKGCMC	1 cut(s)	1465
BalI	TGGCCA	1 cut(s)	311
BanI	GGYRCC	2 cut(s)	151, 360
BarI	GAAGNNNNNNTAC	2 cut(s)	423, 455
BauI	CACGAG	1 cut(s)	420
BbsI	GAAGAC	1 cut(s)	916
Bbv12I	GWGCWC	1 cut(s)	1465
BbvI	GCAGC	6 cut(s)	400, 447, 1033, 1055, 1132, 1278
BccI	CCATC	4 cut(s)	148, 866, 968, 1343
BceAI	ACGGC	2 cut(s)	458, 825
BcgI	CGANNNNNNTGC	2 cut(s)	390, 424
BciT130I	CCWGG	2 cut(s)	293, 1098
BciVI	GTATCC	1 cut(s)	758
BclI	TGATCA	1 cut(s)	631
BcnI	CCSGG	1 cut(s)	482
BcoDI	GTCTC	3 cut(s)	304, 652, 897
BfaI	CTAG	1 cut(s)	1514
BfmI	CTRYAG	1 cut(s)	1582
BfoI	RGCGCY	1 cut(s)	364
BfuAI	ACCTGC	2 cut(s)	326, 406
BfuI	GTATCC	1 cut(s)	758
BisI	GCNGC	9 cut(s)	364, 386, 389, 446, 461, 1044, 1047, 1146, 1267
BlsI	GCNGC	9 cut(s)	365, 387, 390, 447, 462, 1045, 1048, 1147, 1268
Bme1390I	CCNGG	3 cut(s)	293, 482, 1098
Bme18I	GGWCC	2 cut(s)	478, 1100
BmgBI	CACGTC	2 cut(s)	247, 914
BmgT120I	GGNCC	4 cut(s)	478, 811, 1100, 1364
BmiI	GGNNCC	6 cut(s)	138, 153, 362, 480, 1102, 1153
BmrFI	CCNGG	3 cut(s)	293, 482, 1098
BmsI	GCATC	5 cut(s)	39, 1030, 1222, 1275, 1498
BpiI	GAAGAC	1 cut(s)	916
BpmI	CTGGAG	2 cut(s)	275, 1511
Bpu10I	CCTNAGC	1 cut(s)	284
BpuMI	CCSGG	1 cut(s)	482
Bsa29I	ATCGAT	1 cut(s)	1170
BsaAI	YACGTR	1 cut(s)	42
BsaHI	GRCGYC	3 cut(s)	258, 297, 361
BsaI	GGTCTC	1 cut(s)	897
BsaJI	CCNNGG	2 cut(s)	261, 1414
BsaWI	WCCGGW	1 cut(s)	1333
Bsc4I	CCNNNNNNNGG	1 cut(s)	1420
Bse118I	RCCGGY	3 cut(s)	148, 1148, 1333
Bse1I	ACTGG	5 cut(s)	69, 599, 847, 903, 1462
Bse3DI	GCAATG	1 cut(s)	841
BseBI	CCWGG	2 cut(s)	293, 1098
BseCI	ATCGAT	1 cut(s)	1170
BseDI	CCNNGG	2 cut(s)	261, 1414
BseGI	GGATG	4 cut(s)	256, 1045, 1354, 1513
BseLI	CCNNNNNNNGG	1 cut(s)	1420
BseMI	GCAATG	1 cut(s)	841
BseMII	CTCAG	3 cut(s)	640, 816, 1166
BseNI	ACTGG	5 cut(s)	69, 599, 847, 903, 1462
BseSI	GKGCMC	1 cut(s)	1465
BseXI	GCAGC	6 cut(s)	400, 447, 1033, 1055, 1132, 1278
BseYI	CCCAGC	1 cut(s)	980
BsgI	GTGCAG	2 cut(s)	256, 1032
BshFI	GGCC	6 cut(s)	226, 311, 385, 812, 1366, 1413
BshNI	GGYRCC	2 cut(s)	151, 360
BshTI	ACCGGT	1 cut(s)	1333
BshVI	ATCGAT	1 cut(s)	1170
BsiHKAI	GWGCWC	1 cut(s)	1465
BsiSI	CCGG	5 cut(s)	149, 482, 751, 1149, 1334
BslFI	GGGAC	2 cut(s)	1086, 1601
BslI	CCNNNNNNNGG	1 cut(s)	1420
BsmAI	GTCTC	3 cut(s)	304, 652, 897
BsmBI	CGTCTC	1 cut(s)	304
BsmFI	GGGAC	2 cut(s)	1086, 1601
BsnI	GGCC	6 cut(s)	226, 311, 385, 812, 1366, 1413
Bso31I	GGTCTC	1 cut(s)	897
Bsp1286I	GDGCHC	1 cut(s)	1465
Bsp143I	GATC	4 cut(s)	631, 739, 1171, 1486
BspACI	CCGC	7 cut(s)	134, 155, 161, 167, 364, 386, 445
BspANI	GGCC	6 cut(s)	226, 311, 385, 812, 1366, 1413
BspCNI	CTCAG	3 cut(s)	639, 815, 1167
BspDI	ATCGAT	1 cut(s)	1170
BspHI	TCATGA	1 cut(s)	949
BspLI	GGNNCC	6 cut(s)	138, 153, 362, 480, 1102, 1153
BspMI	ACCTGC	2 cut(s)	326, 406
BspT107I	GGYRCC	2 cut(s)	151, 360
BspTNI	GGTCTC	1 cut(s)	897
BsrDI	GCAATG	1 cut(s)	841
BsrFI	RCCGGY	3 cut(s)	148, 1148, 1333
BsrI	ACTGG	5 cut(s)	69, 599, 847, 903, 1462
BssAI	RCCGGY	3 cut(s)	148, 1148, 1333
BssECI	CCNNGG	2 cut(s)	261, 1414
BssMI	GATC	4 cut(s)	631, 739, 1171, 1486
BssNI	GRCGYC	3 cut(s)	258, 297, 361
BssSI	CACGAG	1 cut(s)	420
BssT1I	CCWWGG	1 cut(s)	261
Bst2BI	CACGAG	1 cut(s)	420
Bst2UI	CCWGG	2 cut(s)	293, 1098
Bst4CI	ACNGT	8 cut(s)	26, 84, 91, 663, 880, 1009, 1053, 1637
BstACI	GRCGYC	3 cut(s)	258, 297, 361
BstAPI	GCANNNNNTGC	1 cut(s)	1055
BstBAI	YACGTR	1 cut(s)	42
BstC8I	GCNNGC	2 cut(s)	772, 924
BstDEI	CTNAG	6 cut(s)	284, 558, 626, 802, 1023, 1175
BstEII	GGTNACC	1 cut(s)	1336
BstF5I	GGATG	4 cut(s)	256, 1045, 1354, 1513
BstH2I	RGCGCY	1 cut(s)	364
BstHHI	GCGC	3 cut(s)	363, 450, 641
BstKTI	GATC	4 cut(s)	634, 742, 1174, 1489
BstMAI	GTCTC	3 cut(s)	304, 652, 897
BstMBI	GATC	4 cut(s)	631, 739, 1171, 1486
BstMWI	GCNNNNNNNGC	7 cut(s)	232, 285, 882, 932, 1055, 1263, 1275
BstNI	CCWGG	2 cut(s)	293, 1098
BstNSI	RCATGY	1 cut(s)	926
BstPI	GGTNACC	1 cut(s)	1336
BstSCI	CCNGG	3 cut(s)	291, 480, 1096
BstSFI	CTRYAG	1 cut(s)	1582
BstSLI	GKGCMC	1 cut(s)	1465
BstV1I	GCAGC	6 cut(s)	400, 447, 1033, 1055, 1132, 1278
BstV2I	GAAGAC	1 cut(s)	916
BstXI	CCANNNNNNTGG	1 cut(s)	1558
Bsu15I	ATCGAT	1 cut(s)	1170
BsuI	GTATCC	1 cut(s)	758
BsuRI	GGCC	6 cut(s)	226, 311, 385, 812, 1366, 1413
BsuTUI	ATCGAT	1 cut(s)	1170
BtgZI	GCGATG	1 cut(s)	1298
BtrI	CACGTC	2 cut(s)	247, 914
BtsCI	GGATG	4 cut(s)	256, 1045, 1354, 1513
BtsI	GCAGTG	1 cut(s)	268
BtsIMutI	CAGTG	7 cut(s)	80, 268, 573, 634, 840, 910, 1455
BveI	ACCTGC	2 cut(s)	326, 406
Cac8I	GCNNGC	2 cut(s)	772, 924
CaiI	CAGNNNCTG	1 cut(s)	980
CciI	TCATGA	1 cut(s)	949
CfoI	GCGC	3 cut(s)	363, 450, 641
Cfr10I	RCCGGY	3 cut(s)	148, 1148, 1333
Cfr13I	GGNCC	4 cut(s)	478, 811, 1100, 1364
ClaI	ATCGAT	1 cut(s)	1170
CseI	GACGC	2 cut(s)	241, 266
Csp6I	GTAC	2 cut(s)	22, 325
CspAI	ACCGGT	1 cut(s)	1333
CviQI	GTAC	2 cut(s)	22, 325
DdeI	CTNAG	6 cut(s)	284, 558, 626, 802, 1023, 1175
DinI	GGCGCC	1 cut(s)	362
DpnI	GATC	4 cut(s)	633, 741, 1173, 1488
DpnII	GATC	4 cut(s)	631, 739, 1171, 1486
DraI	TTTAAA	1 cut(s)	930
DraIII	CACNNNGTG	1 cut(s)	629
EaeI	YGGCCR	3 cut(s)	224, 309, 383
EciI	GGCGGA	1 cut(s)	149
Eco130I	CCWWGG	1 cut(s)	261
Eco31I	GGTCTC	1 cut(s)	897
Eco32I	GATATC	1 cut(s)	1297
Eco47I	GGWCC	2 cut(s)	478, 1100
Eco57I	CTGAAG	2 cut(s)	355, 1576
Eco91I	GGTNACC	1 cut(s)	1336
EcoO65I	GGTNACC	1 cut(s)	1336
EcoRII	CCWGG	2 cut(s)	291, 1096
EcoRV	GATATC	1 cut(s)	1297
EcoT14I	CCWWGG	1 cut(s)	261
EgeI	GGCGCC	1 cut(s)	362
EheI	GGCGCC	1 cut(s)	362
ErhI	CCWWGG	1 cut(s)	261
Esp3I	CGTCTC	1 cut(s)	304
FalI	AAGNNNNNCTT	2 cut(s)	634, 666
FaqI	GGGAC	2 cut(s)	1086, 1601
FauNDI	CATATG	1 cut(s)	1557
FbaI	TGATCA	1 cut(s)	631
Fnu4HI	GCNGC	9 cut(s)	364, 386, 389, 446, 461, 1044, 1047, 1146, 1267
FokI	GGATG	4 cut(s)	263, 1052, 1361, 1520
Fsp4HI	GCNGC	9 cut(s)	364, 386, 389, 446, 461, 1044, 1047, 1146, 1267
FspBI	CTAG	1 cut(s)	1514
GlaI	GCGC	3 cut(s)	362, 449, 640
GluI	GCNGC	9 cut(s)	364, 386, 389, 446, 461, 1044, 1047, 1146, 1267
GsaI	CCCAGC	1 cut(s)	984
GsuI	CTGGAG	2 cut(s)	275, 1511
HaeII	RGCGCY	1 cut(s)	364
HaeIII	GGCC	6 cut(s)	226, 311, 385, 812, 1366, 1413
HapII	CCGG	5 cut(s)	149, 482, 751, 1149, 1334
HgaI	GACGC	2 cut(s)	241, 266
HhaI	GCGC	3 cut(s)	363, 450, 641
Hin1I	GRCGYC	3 cut(s)	258, 297, 361
Hin6I	GCGC	3 cut(s)	361, 448, 639
HinP1I	GCGC	3 cut(s)	361, 448, 639
HincII	GTYRAC	1 cut(s)	520
HindII	GTYRAC	1 cut(s)	520
HpaII	CCGG	5 cut(s)	149, 482, 751, 1149, 1334
HphI	GGTGA	3 cut(s)	135, 1015, 1640
Hpy166II	GTNNAC	5 cut(s)	87, 256, 520, 1355, 1463
Hpy188I	TCNGA	8 cut(s)	120, 201, 207, 349, 478, 739, 820, 1176
Hpy188III	TCNNGA	5 cut(s)	420, 950, 1300, 1490, 1569
Hpy8I	GTNNAC	5 cut(s)	87, 256, 520, 1355, 1463
Hpy99I	CGWCG	4 cut(s)	175, 232, 235, 780
HpyAV	CCTTC	5 cut(s)	65, 757, 1074, 1251, 1619
HpyCH4III	ACNGT	8 cut(s)	26, 84, 91, 663, 880, 1009, 1053, 1637
HpyCH4IV	ACGT	4 cut(s)	41, 246, 297, 913
HpyCH4V	TGCA	7 cut(s)	273, 321, 401, 463, 1043, 1049, 1463
HpyF10VI	GCNNNNNNNGC	7 cut(s)	232, 285, 882, 932, 1055, 1263, 1275
HpyF3I	CTNAG	6 cut(s)	284, 558, 626, 802, 1023, 1175
HpySE526I	ACGT	4 cut(s)	41, 246, 297, 913
Hsp92I	GRCGYC	3 cut(s)	258, 297, 361
HspAI	GCGC	3 cut(s)	361, 448, 639
KasI	GGCGCC	1 cut(s)	360
Ksp22I	TGATCA	1 cut(s)	631
Kzo9I	GATC	4 cut(s)	631, 739, 1171, 1486
LmnI	GCTCC	3 cut(s)	136, 740, 1317
Lsp1109I	GCAGC	6 cut(s)	400, 447, 1033, 1055, 1132, 1278
LweI	GCATC	5 cut(s)	39, 1030, 1222, 1275, 1498
MaeI	CTAG	1 cut(s)	1514
MaeII	ACGT	4 cut(s)	41, 246, 297, 913
MaeIII	GTNAC	9 cut(s)	619, 724, 791, 805, 1003, 1009, 1336, 1402, 1537
MalI	GATC	4 cut(s)	633, 741, 1173, 1488
MboI	GATC	4 cut(s)	631, 739, 1171, 1486
MboII	GAAGA	6 cut(s)	361, 544, 881, 921, 1059, 1574
MfeI	CAATTG	1 cut(s)	1130
MhlI	GDGCHC	1 cut(s)	1465
MlsI	TGGCCA	1 cut(s)	311
MluCI	AATT	7 cut(s)	464, 645, 824, 965, 1092, 1130, 1533
MluNI	TGGCCA	1 cut(s)	311
Mly113I	GGCGCC	1 cut(s)	361
MlyI	GAGTC	3 cut(s)	344, 1366, 1457
MmeI	TCCRAC	4 cut(s)	327, 372, 1326, 1476
Mox20I	TGGCCA	1 cut(s)	311
MroXI	GAANNNNTTC	1 cut(s)	1087
MscI	TGGCCA	1 cut(s)	311
MseI	TTAA	5 cut(s)	599, 672, 929, 1437, 1617
MslI	CAYNNNNRTG	1 cut(s)	311
Msp20I	TGGCCA	1 cut(s)	311
MspA1I	CMGCKG	1 cut(s)	1046
MspI	CCGG	5 cut(s)	149, 482, 751, 1149, 1334
MspR9I	CCNGG	3 cut(s)	293, 482, 1098
MunI	CAATTG	1 cut(s)	1130
MvaI	CCWGG	2 cut(s)	293, 1098
MwoI	GCNNNNNNNGC	7 cut(s)	232, 285, 882, 932, 1055, 1263, 1275
NarI	GGCGCC	1 cut(s)	361
NciI	CCSGG	1 cut(s)	482
NdeI	CATATG	1 cut(s)	1557
NdeII	GATC	4 cut(s)	631, 739, 1171, 1486
NlaIV	GGNNCC	6 cut(s)	138, 153, 362, 480, 1102, 1153
NmeAIII	GCCGAG	2 cut(s)	197, 1439
NmuCI	GTSAC	3 cut(s)	619, 791, 1003
NspI	RCATGY	1 cut(s)	926
PaeI	GCATGC	1 cut(s)	926
PagI	TCATGA	1 cut(s)	949
PcsI	WCGNNNNNNNCGW	2 cut(s)	224, 345
PdmI	GAANNNNTTC	1 cut(s)	1087
PfeI	GAWTC	9 cut(s)	196, 202, 208, 611, 1019, 1388, 1427, 1565, 1654
PflFI	GACNNNGTC	1 cut(s)	915
PfoI	TCCNGGA	1 cut(s)	291
PinAI	ACCGGT	1 cut(s)	1333
PkrI	GCNGC	9 cut(s)	365, 387, 390, 447, 462, 1045, 1048, 1147, 1268
PleI	GAGTC	3 cut(s)	344, 1366, 1456
PluTI	GGCGCC	1 cut(s)	364
PpsI	GAGTC	3 cut(s)	344, 1366, 1456
Ppu21I	YACGTR	1 cut(s)	42
PsiI	TTATAA	1 cut(s)	1109
Psp6I	CCWGG	2 cut(s)	291, 1096
PspEI	GGTNACC	1 cut(s)	1336
PspFI	CCCAGC	1 cut(s)	980
PspGI	CCWGG	2 cut(s)	291, 1096
PspN4I	GGNNCC	6 cut(s)	138, 153, 362, 480, 1102, 1153
PspPI	GGNCC	4 cut(s)	478, 811, 1100, 1364
PstNI	CAGNNNCTG	1 cut(s)	980
PsyI	GACNNNGTC	1 cut(s)	915
PvuII	CAGCTG	1 cut(s)	1046
RsaI	GTAC	2 cut(s)	23, 326
RsaNI	GTAC	2 cut(s)	22, 325
RseI	CAYNNNNRTG	1 cut(s)	311
SaqAI	TTAA	5 cut(s)	599, 672, 929, 1437, 1617
SatI	GCNGC	9 cut(s)	364, 386, 389, 446, 461, 1044, 1047, 1146, 1267
Sau3AI	GATC	4 cut(s)	631, 739, 1171, 1486
Sau96I	GGNCC	4 cut(s)	478, 811, 1100, 1364
SchI	GAGTC	3 cut(s)	344, 1366, 1457
ScrFI	CCNGG	3 cut(s)	293, 482, 1098
SduI	GDGCHC	1 cut(s)	1465
SfaNI	GCATC	5 cut(s)	39, 1030, 1222, 1275, 1498
SfcI	CTRYAG	1 cut(s)	1582
SfoI	GGCGCC	1 cut(s)	362
SinI	GGWCC	2 cut(s)	478, 1100
SmiMI	CAYNNNNRTG	1 cut(s)	311
SphI	GCATGC	1 cut(s)	926
Sse9I	AATT	7 cut(s)	464, 645, 824, 965, 1092, 1130, 1533
SsiI	CCGC	7 cut(s)	134, 155, 161, 167, 364, 386, 445
SspDI	GGCGCC	1 cut(s)	360
SspI	AATATT	1 cut(s)	1441
SspMI	CTAG	1 cut(s)	1514
StyD4I	CCNGG	3 cut(s)	291, 480, 1096
StyI	CCWWGG	1 cut(s)	261
TaaI	ACNGT	8 cut(s)	26, 84, 91, 663, 880, 1009, 1053, 1637
TaiI	ACGT	4 cut(s)	44, 249, 300, 916
TaqI	TCGA	3 cut(s)	691, 1170, 1205
TasI	AATT	7 cut(s)	464, 645, 824, 965, 1092, 1130, 1533
TauI	GCSGC	3 cut(s)	366, 388, 448
TfiI	GAWTC	9 cut(s)	196, 202, 208, 611, 1019, 1388, 1427, 1565, 1654
Tru1I	TTAA	5 cut(s)	599, 672, 929, 1437, 1617
Tru9I	TTAA	5 cut(s)	599, 672, 929, 1437, 1617
TscAI	CASTG	7 cut(s)	87, 275, 573, 634, 847, 910, 1462
TseFI	GTSAC	3 cut(s)	619, 791, 1003
TseI	GCWGC	6 cut(s)	388, 460, 1043, 1046, 1145, 1266
Tsp45I	GTSAC	3 cut(s)	619, 791, 1003
TspDTI	ATGAA	9 cut(s)	487, 552, 690, 1059, 1130, 1140, 1227, 1380, 1593
TspGWI	ACGGA	1 cut(s)	467
TspRI	CASTG	7 cut(s)	87, 275, 573, 634, 847, 910, 1462
Tth111I	GACNNNGTC	1 cut(s)	915
VneI	GTGCAC	1 cut(s)	1461
VpaK11BI	GGWCC	2 cut(s)	478, 1100
XceI	RCATGY	1 cut(s)	926
XcmI	CCANNNNNNNNNTGG	1 cut(s)	219
XmnI	GAANNNNTTC	1 cut(s)	1087
XspI	CTAG	1 cut(s)	1514
ZraI	GACGTC	1 cut(s)	298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.