Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0015677

Physical Location & Seq

Genomic Coordinates Forward (+)

84350651 .. 84354609

Gene Structure 3959 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG620700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGACAAGTAGTTATAGCCCGTACAGTCGCATCATTTTTACGTGTCGCCTTTCCCCTTCCAAAACTGGTTTCTATTCTACTGTTGTGAGCGACATCATAGTTTGGTATCTGATATTTGCAATGGCGGAGCCATCACCACCGGCACCGCCGACGATGAGTGAGAACCAGAACCAGAATCAGAATCAGAATCCAAGCTCGGCGTGGCCGGCGACGCACATGACTGACGTGGATGTGGACGCCTTGGCTCACTGCACCAGCTACCTTAGCCTCCAGGACGTCTCCAACATGGCCATGACCTGCAAGTACCTCCAAAAAGTCGCCTACTCCGACTCTATCTGGCGCCGCTTCTTCAGGGAGAGTTGGCCGCAGCAAACACCTGCATTTGCTTCGCCAACTTCAGGAGTTAGGGAAGCGTATTTACGGCGGCGCACGGATTTGCTGCAATTCAAGTTTTCGGACCCGGTGGTTGCCGATTTCATCACAGATACAAAGCCTGTTGACCACATTTTATTGAATGAAAAGCATCTAATCTTCTCTAAGGGTTCAGTGATACAAGTGATAAAGATTGATGACTGGTTAAGTGGGAGGGATTCGGTTGTCACACTCAGTGATCACAGCGCAAGAATTACTTGTATGAGACTGTTTTCGCTTAATGAAACATCTTTATATCGAAGTGAAGCACAAAGGAAAGAGAATGTTTTGGTAACTTCAAGCTCCGATCATGGTATCCGGCTATGGTGGAAGGGTGCTTGCCGACGATGTTTTACAGGTCACAAAGGCTCAGTTACGGCCCTGTCTGATAAATTGTTAGGCAATGGCACTGGAAAAGTATTGGCAAGTGGAGGGGAAGATGGCACAGTTCGCCTTTGGTCTCTTACTTCCAGTGGAAGACGTGGTCAGCATGCTTTAAAGGCTACTTTCTATGGTCATGAGAAACCCATCAAATTGATGTCAGTTACTGGGCATAAAACTTCTATTTTGGTAACTGTTACAGGAGATTCTAAGGTAAGGTTGTGGGATGCAGCTGCACAGTCTGCTGTTCCTTCTTCATCTTGTGTGGGAATGACTTCAATTCCTGGTCCCCTTATAAACATGAAGTGCCATGAACAATTGCTCTATCTTGCTGCCGGTTCCTCTGTTGCTGTAATCGATCTGAGGACAATGAGAAAAGTTCTCCCATATTCGATAGATGAAAAGCTATGTTCTTTTGATGCCATTCCTTCAAAATCCTTGTGCTGTGTTGGCAGCAGTAATGGCAGAGCGATGCTTTACGATATCAGGAGGGTCAAGCTCCCCAACTCGAAAGCAGAACCAGTAACCGAGTTGGATGGTGGACACATTGGGCCATTGACTCACTTGAACATGGATTCATACAAAATAGTTACAGGAGGCCGAGGCAGGGGAGATTCTCATGTTAATATTTGGGAGTCCAACACTGGTGCACTCGTCAGTTCCCTGACTTGTGATCTGGAGGAAGCAAGTATGGATGCCCTAGCTGTAAATGGGTGTCAAATTGTTACTGCCAACACCAGCCATATGGAAGATTCGGGAGTTCTACGCTATAGGGACTTCAGCAATGCTTCATGTCCTGCTGTTAATAGTGAAGGTGACCGTGTTTCAAAGTTTTGGAATCCACAATCTTATAGTGATAGTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000428 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005737 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010604 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0016604 GO:0016607 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0030914 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0033276 GO:0035770 GO:0036211 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070461 GO:0071704 GO:0071840 GO:0080090 GO:0090575 GO:0140110 GO:1901564 GO:1902493 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:1990904 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

F-box F-box-like WD40

Protein Analysis

552

Amino Acids

60.69

Weight (kDa)

8.3

Isoelectric Point (pI)

43.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	83 - 118	2.7e-06	F-box-like
WD40_CDC20-Fz	PF24807	197 - 347	1e-09	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	213 - 428	1.7e-12	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	228 - 347	1.9e-12	WDR3 first beta-propeller domain
WD40_Gbeta	PF25391	230 - 345	4.9e-06	G protein beta WD-40 repeat protein
Beta-prop_TEP1_2nd	PF25047	230 - 343	5.7e-06	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	231 - 341	8.4e-07	WDR3 second beta-propeller domain
Beta-prop_SCAP	PF24017	234 - 343	4.4e-06	SCAP Beta-propeller
WD40	PF00400	250 - 291	1.5e-07	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	272 - 487	2.9e-19	THOC3 beta-propeller domain
WD40_Prp19	PF24814	275 - 488	1e-09	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015677)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g49170
malus_domestica	MD09G1047900.v1.1 MD17G1048000.v1.1 MD17G1048100.v1.1
prunus_persica	Prupe.3G271100_v2.0.a1
pyrus_communis	pycom17g04280
rosa_chinensis	RchiOBHm_Chr2g0169041
rosa_laevigata	RLG00000021826
rosa_multiflora	Rmu_ssc0000393.1_g000025
rosa_roxburghii	Rroxscaffold_2G00082510
rosa_rugosa	Rorug02G0536500
rosa_samantha	Rh2AG608000 Rh2BG620700 Rh2CG589600 Rh2DG631300
rosa_wichuraiana	Rw2G050420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1088
AarI	CACCTGC	1 cut(s)	385
AatII	GACGTC	1 cut(s)	279
Acc36I	ACCTGC	2 cut(s)	305, 385
AccB1I	GGYRCC	2 cut(s)	142, 339
AciI	CCGC	5 cut(s)	125, 146, 343, 365, 424
AcoI	YGGCCR	3 cut(s)	203, 288, 362
AcuI	CTGAAG	3 cut(s)	334, 381, 1555
AcyI	GRCGYC	3 cut(s)	237, 276, 340
AdeI	CACNNNGTG	1 cut(s)	608
AfaI	GTAC	2 cut(s)	23, 305
AfiI	CCNNNNNNNGG	2 cut(s)	398, 1399
AflIII	ACRYGT	1 cut(s)	41
AgsI	TTSAA	7 cut(s)	448, 514, 711, 1071, 1224, 1360, 1620
AjiI	CACGTC	2 cut(s)	226, 893
AjnI	CCWGG	2 cut(s)	270, 1075
AjuI	GAANNNNNNNTTGG	2 cut(s)	53, 85
AluBI	AGCT	7 cut(s)	195, 258, 714, 1025, 1198, 1291, 1496
AluI	AGCT	7 cut(s)	195, 258, 714, 1025, 1198, 1291, 1496
Alw21I	GWGCWC	1 cut(s)	1444
Alw26I	GTCTC	3 cut(s)	283, 631, 876
Alw44I	GTGCAC	1 cut(s)	1440
AlwNI	CAGNNNCTG	1 cut(s)	959
AoxI	GGCC	6 cut(s)	203, 288, 362, 789, 1343, 1390
ApaLI	GTGCAC	1 cut(s)	1440
ApeKI	GCWGC	6 cut(s)	367, 439, 1022, 1025, 1124, 1245
Asp700I	GAANNNNTTC	1 cut(s)	1066
AspLEI	GCGC	3 cut(s)	342, 429, 620
AspS9I	GGNCC	4 cut(s)	457, 790, 1079, 1343
AsuC2I	CCSGG	1 cut(s)	461
AsuHPI	GGTGA	2 cut(s)	126, 1619
AvaII	GGWCC	2 cut(s)	457, 1079
BaeGI	GKGCMC	1 cut(s)	1444
BalI	TGGCCA	1 cut(s)	290
BanI	GGYRCC	2 cut(s)	142, 339
BarI	GAAGNNNNNNTAC	2 cut(s)	402, 434
BbsI	GAAGAC	1 cut(s)	895
Bbv12I	GWGCWC	1 cut(s)	1444
BbvI	GCAGC	6 cut(s)	379, 426, 1012, 1034, 1111, 1257
BccI	CCATC	4 cut(s)	139, 845, 947, 1322
BceAI	ACGGC	2 cut(s)	437, 804
BcgI	CGANNNNNNTGC	2 cut(s)	369, 403
BciT130I	CCWGG	2 cut(s)	272, 1077
BciVI	GTATCC	1 cut(s)	737
BclI	TGATCA	1 cut(s)	610
BcnI	CCSGG	1 cut(s)	461
BcoDI	GTCTC	3 cut(s)	283, 631, 876
BfaI	CTAG	1 cut(s)	1493
BfmI	CTRYAG	1 cut(s)	1561
BfoI	RGCGCY	1 cut(s)	343
BfuAI	ACCTGC	2 cut(s)	305, 385
BfuI	GTATCC	1 cut(s)	737
BisI	GCNGC	9 cut(s)	343, 365, 368, 425, 440, 1023, 1026, 1125, 1246
BlsI	GCNGC	9 cut(s)	344, 366, 369, 426, 441, 1024, 1027, 1126, 1247
Bme1390I	CCNGG	3 cut(s)	272, 461, 1077
Bme18I	GGWCC	2 cut(s)	457, 1079
BmgBI	CACGTC	2 cut(s)	226, 893
BmgT120I	GGNCC	4 cut(s)	457, 790, 1079, 1343
BmiI	GGNNCC	6 cut(s)	129, 144, 341, 459, 1081, 1132
BmrFI	CCNGG	3 cut(s)	272, 461, 1077
BmrI	ACTGGG	1 cut(s)	969
BmsI	GCATC	6 cut(s)	39, 532, 1009, 1201, 1254, 1477
BmuI	ACTGGG	1 cut(s)	969
BpiI	GAAGAC	1 cut(s)	895
BpmI	CTGGAG	2 cut(s)	254, 1490
Bpu10I	CCTNAGC	1 cut(s)	263
BpuMI	CCSGG	1 cut(s)	461
Bsa29I	ATCGAT	1 cut(s)	1149
BsaAI	YACGTR	1 cut(s)	42
BsaHI	GRCGYC	3 cut(s)	237, 276, 340
BsaI	GGTCTC	1 cut(s)	876
BsaJI	CCNNGG	2 cut(s)	240, 1393
Bsc4I	CCNNNNNNNGG	2 cut(s)	398, 1399
Bse118I	RCCGGY	3 cut(s)	139, 205, 1127
Bse1I	ACTGG	7 cut(s)	70, 578, 826, 882, 964, 1313, 1441
Bse3DI	GCAATG	3 cut(s)	126, 820, 1582
BseBI	CCWGG	2 cut(s)	272, 1077
BseCI	ATCGAT	1 cut(s)	1149
BseDI	CCNNGG	2 cut(s)	240, 1393
BseGI	GGATG	4 cut(s)	235, 1024, 1333, 1492
BseLI	CCNNNNNNNGG	2 cut(s)	398, 1399
BseMI	GCAATG	3 cut(s)	126, 820, 1582
BseMII	CTCAG	3 cut(s)	619, 795, 1145
BseNI	ACTGG	7 cut(s)	70, 578, 826, 882, 964, 1313, 1441
BseSI	GKGCMC	1 cut(s)	1444
BseXI	GCAGC	6 cut(s)	379, 426, 1012, 1034, 1111, 1257
BsgI	GTGCAG	2 cut(s)	235, 1011
BshFI	GGCC	6 cut(s)	205, 290, 364, 791, 1345, 1392
BshNI	GGYRCC	2 cut(s)	142, 339
BshVI	ATCGAT	1 cut(s)	1149
BsiHKAI	GWGCWC	1 cut(s)	1444
BsiSI	CCGG	5 cut(s)	140, 206, 461, 730, 1128
BslFI	GGGAC	2 cut(s)	1065, 1580
BslI	CCNNNNNNNGG	2 cut(s)	398, 1399
BsmAI	GTCTC	3 cut(s)	283, 631, 876
BsmBI	CGTCTC	1 cut(s)	283
BsmFI	GGGAC	2 cut(s)	1065, 1580
BsnI	GGCC	6 cut(s)	205, 290, 364, 791, 1345, 1392
Bso31I	GGTCTC	1 cut(s)	876
Bsp1286I	GDGCHC	1 cut(s)	1444
Bsp143I	GATC	4 cut(s)	610, 718, 1150, 1465
BspACI	CCGC	5 cut(s)	125, 146, 343, 365, 424
BspANI	GGCC	6 cut(s)	205, 290, 364, 791, 1345, 1392
BspCNI	CTCAG	3 cut(s)	618, 794, 1146
BspDI	ATCGAT	1 cut(s)	1149
BspHI	TCATGA	1 cut(s)	928
BspLI	GGNNCC	6 cut(s)	129, 144, 341, 459, 1081, 1132
BspMI	ACCTGC	2 cut(s)	305, 385
BspT107I	GGYRCC	2 cut(s)	142, 339
BspTNI	GGTCTC	1 cut(s)	876
BsrDI	GCAATG	3 cut(s)	126, 820, 1582
BsrFI	RCCGGY	3 cut(s)	139, 205, 1127
BsrI	ACTGG	7 cut(s)	70, 578, 826, 882, 964, 1313, 1441
BssAI	RCCGGY	3 cut(s)	139, 205, 1127
BssECI	CCNNGG	2 cut(s)	240, 1393
BssMI	GATC	4 cut(s)	610, 718, 1150, 1465
BssNI	GRCGYC	3 cut(s)	237, 276, 340
BssT1I	CCWWGG	1 cut(s)	240
Bst2UI	CCWGG	2 cut(s)	272, 1077
Bst4CI	ACNGT	7 cut(s)	26, 82, 642, 859, 988, 1032, 1613
BstACI	GRCGYC	3 cut(s)	237, 276, 340
BstAPI	GCANNNNNTGC	1 cut(s)	1034
BstBAI	YACGTR	1 cut(s)	42
BstC8I	GCNNGC	3 cut(s)	207, 751, 903
BstDEI	CTNAG	6 cut(s)	263, 537, 605, 781, 1002, 1154
BstEII	GGTNACC	1 cut(s)	1607
BstF5I	GGATG	4 cut(s)	235, 1024, 1333, 1492
BstH2I	RGCGCY	1 cut(s)	343
BstHHI	GCGC	3 cut(s)	342, 429, 620
BstKTI	GATC	4 cut(s)	613, 721, 1153, 1468
BstMAI	GTCTC	3 cut(s)	283, 631, 876
BstMBI	GATC	4 cut(s)	610, 718, 1150, 1465
BstMWI	GCNNNNNNNGC	8 cut(s)	206, 211, 264, 861, 911, 1034, 1242, 1254
BstNI	CCWGG	2 cut(s)	272, 1077
BstNSI	RCATGY	1 cut(s)	905
BstPI	GGTNACC	1 cut(s)	1607
BstSCI	CCNGG	3 cut(s)	270, 459, 1075
BstSFI	CTRYAG	1 cut(s)	1561
BstSLI	GKGCMC	1 cut(s)	1444
BstV1I	GCAGC	6 cut(s)	379, 426, 1012, 1034, 1111, 1257
BstV2I	GAAGAC	1 cut(s)	895
BstXI	CCANNNNNNTGG	1 cut(s)	1537
Bsu15I	ATCGAT	1 cut(s)	1149
BsuI	GTATCC	1 cut(s)	737
BsuRI	GGCC	6 cut(s)	205, 290, 364, 791, 1345, 1392
BsuTUI	ATCGAT	1 cut(s)	1149
BtgZI	GCGATG	1 cut(s)	1277
BtrI	CACGTC	2 cut(s)	226, 893
BtsCI	GGATG	4 cut(s)	235, 1024, 1333, 1492
BtsI	GCAGTG	1 cut(s)	247
BtsIMutI	CAGTG	6 cut(s)	247, 552, 613, 819, 889, 1434
BveI	ACCTGC	2 cut(s)	305, 385
Cac8I	GCNNGC	3 cut(s)	207, 751, 903
CaiI	CAGNNNCTG	1 cut(s)	959
CciI	TCATGA	1 cut(s)	928
CfoI	GCGC	3 cut(s)	342, 429, 620
Cfr10I	RCCGGY	3 cut(s)	139, 205, 1127
Cfr13I	GGNCC	4 cut(s)	457, 790, 1079, 1343
ClaI	ATCGAT	1 cut(s)	1149
CseI	GACGC	2 cut(s)	220, 245
Csp6I	GTAC	2 cut(s)	22, 304
CviQI	GTAC	2 cut(s)	22, 304
DdeI	CTNAG	6 cut(s)	263, 537, 605, 781, 1002, 1154
DinI	GGCGCC	1 cut(s)	341
DpnI	GATC	4 cut(s)	612, 720, 1152, 1467
DpnII	GATC	4 cut(s)	610, 718, 1150, 1465
DraI	TTTAAA	1 cut(s)	909
DraIII	CACNNNGTG	1 cut(s)	608
EaeI	YGGCCR	3 cut(s)	203, 288, 362
EciI	GGCGGA	1 cut(s)	140
Eco130I	CCWWGG	1 cut(s)	240
Eco31I	GGTCTC	1 cut(s)	876
Eco32I	GATATC	1 cut(s)	1276
Eco47I	GGWCC	2 cut(s)	457, 1079
Eco57I	CTGAAG	3 cut(s)	334, 381, 1555
Eco91I	GGTNACC	1 cut(s)	1607
EcoO65I	GGTNACC	1 cut(s)	1607
EcoRII	CCWGG	2 cut(s)	270, 1075
EcoRV	GATATC	1 cut(s)	1276
EcoT14I	CCWWGG	1 cut(s)	240
EgeI	GGCGCC	1 cut(s)	341
EheI	GGCGCC	1 cut(s)	341
ErhI	CCWWGG	1 cut(s)	240
Esp3I	CGTCTC	1 cut(s)	283
FalI	AAGNNNNNCTT	2 cut(s)	613, 645
FaqI	GGGAC	2 cut(s)	1065, 1580
FauNDI	CATATG	1 cut(s)	1536
FbaI	TGATCA	1 cut(s)	610
Fnu4HI	GCNGC	9 cut(s)	343, 365, 368, 425, 440, 1023, 1026, 1125, 1246
FokI	GGATG	4 cut(s)	242, 1031, 1340, 1499
Fsp4HI	GCNGC	9 cut(s)	343, 365, 368, 425, 440, 1023, 1026, 1125, 1246
FspBI	CTAG	1 cut(s)	1493
GlaI	GCGC	3 cut(s)	341, 428, 619
GluI	GCNGC	9 cut(s)	343, 365, 368, 425, 440, 1023, 1026, 1125, 1246
GsuI	CTGGAG	2 cut(s)	254, 1490
HaeII	RGCGCY	1 cut(s)	343
HaeIII	GGCC	6 cut(s)	205, 290, 364, 791, 1345, 1392
HapII	CCGG	5 cut(s)	140, 206, 461, 730, 1128
HgaI	GACGC	2 cut(s)	220, 245
HhaI	GCGC	3 cut(s)	342, 429, 620
Hin1I	GRCGYC	3 cut(s)	237, 276, 340
Hin6I	GCGC	3 cut(s)	340, 427, 618
HinP1I	GCGC	3 cut(s)	340, 427, 618
HincII	GTYRAC	1 cut(s)	499
HindII	GTYRAC	1 cut(s)	499
HpaII	CCGG	5 cut(s)	140, 206, 461, 730, 1128
HphI	GGTGA	2 cut(s)	126, 1619
Hpy166II	GTNNAC	4 cut(s)	235, 499, 1334, 1442
Hpy188I	TCNGA	8 cut(s)	111, 180, 186, 328, 457, 718, 799, 1155
Hpy188III	TCNNGA	5 cut(s)	399, 929, 1279, 1469, 1548
Hpy8I	GTNNAC	4 cut(s)	235, 499, 1334, 1442
Hpy99I	CGWCG	3 cut(s)	154, 214, 759
HpyAV	CCTTC	5 cut(s)	66, 736, 1053, 1230, 1598
HpyCH4III	ACNGT	7 cut(s)	26, 82, 642, 859, 988, 1032, 1613
HpyCH4IV	ACGT	4 cut(s)	41, 225, 276, 892
HpyCH4V	TGCA	8 cut(s)	119, 252, 300, 380, 442, 1022, 1028, 1442
HpyF10VI	GCNNNNNNNGC	8 cut(s)	206, 211, 264, 861, 911, 1034, 1242, 1254
HpyF3I	CTNAG	6 cut(s)	263, 537, 605, 781, 1002, 1154
HpySE526I	ACGT	4 cut(s)	41, 225, 276, 892
Hsp92I	GRCGYC	3 cut(s)	237, 276, 340
HspAI	GCGC	3 cut(s)	340, 427, 618
KasI	GGCGCC	1 cut(s)	339
KroI	GCCGGC	1 cut(s)	205
KroNI	GCCGGC	1 cut(s)	207
Ksp22I	TGATCA	1 cut(s)	610
Kzo9I	GATC	4 cut(s)	610, 718, 1150, 1465
LmnI	GCTCC	3 cut(s)	127, 719, 1296
Lsp1109I	GCAGC	6 cut(s)	379, 426, 1012, 1034, 1111, 1257
LweI	GCATC	6 cut(s)	39, 532, 1009, 1201, 1254, 1477
MaeI	CTAG	1 cut(s)	1493
MaeII	ACGT	4 cut(s)	41, 225, 276, 892
MalI	GATC	4 cut(s)	612, 720, 1152, 1467
MboI	GATC	4 cut(s)	610, 718, 1150, 1465
MboII	GAAGA	6 cut(s)	340, 523, 860, 900, 1038, 1553
MfeI	CAATTG	1 cut(s)	1109
MhlI	GDGCHC	1 cut(s)	1444
MlsI	TGGCCA	1 cut(s)	290
MluCI	AATT	7 cut(s)	443, 624, 803, 944, 1071, 1109, 1512
MluNI	TGGCCA	1 cut(s)	290
Mly113I	GGCGCC	1 cut(s)	340
MlyI	GAGTC	3 cut(s)	323, 1345, 1436
MmeI	TCCRAC	4 cut(s)	306, 351, 1305, 1455
Mox20I	TGGCCA	1 cut(s)	290
MroNI	GCCGGC	1 cut(s)	205
MroXI	GAANNNNTTC	1 cut(s)	1066
MscI	TGGCCA	1 cut(s)	290
MseI	TTAA	5 cut(s)	578, 651, 908, 1416, 1596
MslI	CAYNNNNRTG	1 cut(s)	290
Msp20I	TGGCCA	1 cut(s)	290
MspA1I	CMGCKG	1 cut(s)	1025
MspI	CCGG	5 cut(s)	140, 206, 461, 730, 1128
MspR9I	CCNGG	3 cut(s)	272, 461, 1077
MunI	CAATTG	1 cut(s)	1109
MvaI	CCWGG	2 cut(s)	272, 1077
MwoI	GCNNNNNNNGC	8 cut(s)	206, 211, 264, 861, 911, 1034, 1242, 1254
NaeI	GCCGGC	1 cut(s)	207
NarI	GGCGCC	1 cut(s)	340
NciI	CCSGG	1 cut(s)	461
NdeI	CATATG	1 cut(s)	1536
NdeII	GATC	4 cut(s)	610, 718, 1150, 1465
NgoMIV	GCCGGC	1 cut(s)	205
NlaIV	GGNNCC	6 cut(s)	129, 144, 341, 459, 1081, 1132
NmeAIII	GCCGAG	2 cut(s)	176, 1418
NmuCI	GTSAC	3 cut(s)	598, 770, 1607
NspI	RCATGY	1 cut(s)	905
PaeI	GCATGC	1 cut(s)	905
PagI	TCATGA	1 cut(s)	928
PaqCI	CACCTGC	1 cut(s)	385
PcsI	WCGNNNNNNNCGW	1 cut(s)	324
PdiI	GCCGGC	1 cut(s)	207
PdmI	GAANNNNTTC	1 cut(s)	1066
PfeI	GAWTC	9 cut(s)	175, 181, 187, 590, 998, 1367, 1406, 1544, 1630
PflFI	GACNNNGTC	1 cut(s)	894
PfoI	TCCNGGA	1 cut(s)	270
PkrI	GCNGC	9 cut(s)	344, 366, 369, 426, 441, 1024, 1027, 1126, 1247
PleI	GAGTC	3 cut(s)	323, 1345, 1435
PluTI	GGCGCC	1 cut(s)	343
PpsI	GAGTC	3 cut(s)	323, 1345, 1435
Ppu21I	YACGTR	1 cut(s)	42
PsiI	TTATAA	1 cut(s)	1088
Psp6I	CCWGG	2 cut(s)	270, 1075
PspEI	GGTNACC	1 cut(s)	1607
PspGI	CCWGG	2 cut(s)	270, 1075
PspN4I	GGNNCC	6 cut(s)	129, 144, 341, 459, 1081, 1132
PspPI	GGNCC	4 cut(s)	457, 790, 1079, 1343
PstNI	CAGNNNCTG	1 cut(s)	959
PsyI	GACNNNGTC	1 cut(s)	894
PvuII	CAGCTG	1 cut(s)	1025
RsaI	GTAC	2 cut(s)	23, 305
RsaNI	GTAC	2 cut(s)	22, 304
RseI	CAYNNNNRTG	1 cut(s)	290
SaqAI	TTAA	5 cut(s)	578, 651, 908, 1416, 1596
SatI	GCNGC	9 cut(s)	343, 365, 368, 425, 440, 1023, 1026, 1125, 1246
Sau3AI	GATC	4 cut(s)	610, 718, 1150, 1465
Sau96I	GGNCC	4 cut(s)	457, 790, 1079, 1343
SchI	GAGTC	3 cut(s)	323, 1345, 1436
ScrFI	CCNGG	3 cut(s)	272, 461, 1077
SduI	GDGCHC	1 cut(s)	1444
SfaNI	GCATC	6 cut(s)	39, 532, 1009, 1201, 1254, 1477
SfcI	CTRYAG	1 cut(s)	1561
SfoI	GGCGCC	1 cut(s)	341
SinI	GGWCC	2 cut(s)	457, 1079
SmiMI	CAYNNNNRTG	1 cut(s)	290
SphI	GCATGC	1 cut(s)	905
Sse9I	AATT	7 cut(s)	443, 624, 803, 944, 1071, 1109, 1512
SsiI	CCGC	5 cut(s)	125, 146, 343, 365, 424
SspDI	GGCGCC	1 cut(s)	339
SspI	AATATT	1 cut(s)	1420
SspMI	CTAG	1 cut(s)	1493
StyD4I	CCNGG	3 cut(s)	270, 459, 1075
StyI	CCWWGG	1 cut(s)	240
TaaI	ACNGT	7 cut(s)	26, 82, 642, 859, 988, 1032, 1613
TaiI	ACGT	4 cut(s)	44, 228, 279, 895
TaqI	TCGA	4 cut(s)	670, 1149, 1184, 1301
TasI	AATT	7 cut(s)	443, 624, 803, 944, 1071, 1109, 1512
TauI	GCSGC	3 cut(s)	345, 367, 427
TfiI	GAWTC	9 cut(s)	175, 181, 187, 590, 998, 1367, 1406, 1544, 1630
Tru1I	TTAA	5 cut(s)	578, 651, 908, 1416, 1596
Tru9I	TTAA	5 cut(s)	578, 651, 908, 1416, 1596
TscAI	CASTG	6 cut(s)	254, 552, 613, 826, 889, 1441
TseFI	GTSAC	3 cut(s)	598, 770, 1607
TseI	GCWGC	6 cut(s)	367, 439, 1022, 1025, 1124, 1245
Tsp45I	GTSAC	3 cut(s)	598, 770, 1607
TspDTI	ATGAA	9 cut(s)	466, 531, 669, 1038, 1109, 1119, 1206, 1359, 1572
TspGWI	ACGGA	1 cut(s)	446
TspRI	CASTG	6 cut(s)	254, 552, 613, 826, 889, 1441
Tth111I	GACNNNGTC	1 cut(s)	894
VneI	GTGCAC	1 cut(s)	1440
VpaK11BI	GGWCC	2 cut(s)	457, 1079
XceI	RCATGY	1 cut(s)	905
XcmI	CCANNNNNNNNNTGG	1 cut(s)	198
XmnI	GAANNNNTTC	1 cut(s)	1066
XspI	CTAG	1 cut(s)	1493
ZraI	GACGTC	1 cut(s)	277

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.