Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0015677

Physical Location & Seq

Genomic Coordinates Forward (+)

83320690 .. 83324271

Gene Structure 3582 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53667

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGACAAGTAGTTATAGCCCGTACAGTCGCATCATTTTTACGTGTCGCCTTTACCTTCCAAAACTGGTTTCTATTCTCTCACTGTTTACTGTTGTGAGCGAAATCATAGTTTCGTATCTGATATTTCCAATGGCGGAGCCATCACCACCGGCACCGGCACCGCCGACGATGAGTGAGAACCAGAATCCAAGCTCGGCGTGGCCGGCGACGCACATGACTGACGTGGATGTGGACGCCTTGGCTCACTGCACCAGCTACCTTAGCCTCCAGGACGTCTCCAACATGGCCATGACCTGCAAGTACCTCCAAAAAGTCGCCTACTCCGACTCTATCTGGCGCCGCTTCTTCAGGGAGAGTTGGCCGCAGCAAACACCTGCATTTGCTTCGCCAACTTCACGAGTTAGGGAAGCGTATTTACGGCGGCGCACGGATTTGCTGCAATTCAAGTTTTCGGACCCGGTGGTTGCCGATTTCATCACAGATAGAAAGCCTGTTGACCACATTTTATTGAATGAAAAGCATATAATCTTCTCTAAGGGTTCAGTGATACAAGTGATAAAGATTGATGACTGGTTAAGTGGGAGGGATTCGGTTGTCACACTCAGTGATCACAGCGCAAGAATTACTTGTATGAGACTGTTTTCGCTTAATGAAACATCTTTATATCGAAGTGAAGCACAAAGGAAAGAGAATGTTTTGGTAACTTCAAGCTCCGATCATGGTATCCGGCTATGGTGGAAGGGTGCTTGCCGACGATGTTTTACAGGTCACAAAGGCTCAGTTACGGCCCTGTCTGATAAATTGTTAGGCAATGGCACTGGAAAAGTATTGGCAAGTGGAGGGGAAGATGGCACAGTTCGCCTTTGGTCTCTTACTTCCAGTGGAAGACGTGGTCAGCATGCTTTAAAGGCTACTTTCTATGGTCATGAGAAACCCATCAAATTGATGTCAGTTGCTGGGCATAAAACTTCTATTTTGGTAACTGTTACAGGAGATTCTAAGGTAAGGTTGTGGGATGCAGCTGCACAGTCTGCTGTTCCTTCTTCATCTTGTGTGGGAATGACTTCAATTCCTGGTCCCCTTATAAACATGAAGTGCCATGAACAATTGCTCTATCTTGCTGCCGGTTCCTCTGTTGCTGTAATCGATCTGAGGACAATGAGAAAAGTTCTCCCATATTCGATAGATGAAAAGCTATGTTCTTTTGATGCCATTCCTTCAAAATCCTTGTGCTGTGTTGGCAGCAGTAATGGCAGAGCGATGCTTTACGATATCAGGAGGGTCAAGCTCCCCAACTCAAAAGCAGAACCAGTAACCGAGTTGGATGGTGGACACATTGGGCCATTGACTCACTTGAACATGGATTCATACAAAATAGTTACAGGAGGCCGAGGCAGGGGAGATTCTCATGTTAATATTTGGGAGTCCAACACTGGTGCACTCGTCAGTTCCCTGACTTGTGATCTGGAGGAAGCAAGTATGGATGCCCTAGCTGTAAATGGGTGTCAAATTGTTACTGCCAACACCAGCCATATGGAAGATTCGGGAGTTCTACGCTATAGGGACTTCAGCAATGCTTCATGTCCTGCTGTTAATAGTGAAGGTGATGACCGTGTTTCAAAGTTTTGGAATCCACAATCTTATAGTGATAGTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000428 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005737 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010604 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0016604 GO:0016607 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0030914 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0033276 GO:0035770 GO:0036211 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070461 GO:0071704 GO:0071840 GO:0080090 GO:0090575 GO:0140110 GO:1901564 GO:1902493 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:1990904 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

F-box F-box-like WD40

Protein Analysis

552

Amino Acids

60.73

Weight (kDa)

8.43

Isoelectric Point (pI)

46.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	82 - 117	2.7e-06	F-box-like
WD40_CDC20-Fz	PF24807	196 - 346	1e-09	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	210 - 427	1.9e-12	WDR5 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	229 - 343	4.4e-06	TEP-1 second beta-propeller
Beta-prop_WDR3_1st	PF25173	230 - 346	4.9e-12	WDR3 first beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	230 - 340	5.4e-07	WDR3 second beta-propeller domain
Beta-prop_SCAP	PF24017	233 - 341	8.7e-06	SCAP Beta-propeller
WD40	PF00400	249 - 290	1.5e-07	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	271 - 486	2.9e-19	THOC3 beta-propeller domain
WD40_Prp19	PF24814	274 - 475	1.3e-09	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015677)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g49170
malus_domestica	MD09G1047900.v1.1 MD17G1048000.v1.1 MD17G1048100.v1.1
prunus_persica	Prupe.3G271100_v2.0.a1
pyrus_communis	pycom17g04280
rosa_chinensis	RchiOBHm_Chr2g0169041
rosa_laevigata	RLG00000021826
rosa_multiflora	Rmu_ssc0000393.1_g000025
rosa_roxburghii	Rroxscaffold_2G00082510
rosa_rugosa	Rorug02G0536500
rosa_samantha	Rh2AG608000 Rh2BG620700 Rh2CG589600 Rh2DG631300
rosa_wichuraiana	Rw2G050420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1085
AarI	CACCTGC	1 cut(s)	382
AatII	GACGTC	1 cut(s)	276
Acc36I	ACCTGC	2 cut(s)	302, 382
AccB1I	GGYRCC	3 cut(s)	151, 157, 336
AciI	CCGC	5 cut(s)	134, 161, 340, 362, 421
AcoI	YGGCCR	3 cut(s)	200, 285, 359
AcuI	CTGAAG	2 cut(s)	331, 1552
AcyI	GRCGYC	3 cut(s)	234, 273, 337
AdeI	CACNNNGTG	1 cut(s)	605
AfaI	GTAC	2 cut(s)	23, 302
AfiI	CCNNNNNNNGG	1 cut(s)	1396
AflIII	ACRYGT	1 cut(s)	41
AgsI	TTSAA	7 cut(s)	445, 511, 708, 1068, 1221, 1357, 1620
AjiI	CACGTC	2 cut(s)	223, 890
AjnI	CCWGG	2 cut(s)	267, 1072
AjuI	GAANNNNNNNTTGG	2 cut(s)	52, 84
AluBI	AGCT	7 cut(s)	192, 255, 711, 1022, 1195, 1288, 1493
AluI	AGCT	7 cut(s)	192, 255, 711, 1022, 1195, 1288, 1493
Alw21I	GWGCWC	1 cut(s)	1441
Alw26I	GTCTC	3 cut(s)	280, 628, 873
Alw44I	GTGCAC	1 cut(s)	1437
AlwNI	CAGNNNCTG	1 cut(s)	956
AoxI	GGCC	6 cut(s)	200, 285, 359, 786, 1340, 1387
ApaLI	GTGCAC	1 cut(s)	1437
ApeKI	GCWGC	6 cut(s)	364, 436, 1019, 1022, 1121, 1242
Asp700I	GAANNNNTTC	1 cut(s)	1063
AspLEI	GCGC	3 cut(s)	339, 426, 617
AspS9I	GGNCC	4 cut(s)	454, 787, 1076, 1340
AsuC2I	CCSGG	1 cut(s)	458
AsuHPI	GGTGA	2 cut(s)	135, 1616
AvaII	GGWCC	2 cut(s)	454, 1076
BaeGI	GKGCMC	1 cut(s)	1441
BalI	TGGCCA	1 cut(s)	287
BanI	GGYRCC	3 cut(s)	151, 157, 336
BarI	GAAGNNNNNNTAC	2 cut(s)	399, 431
BauI	CACGAG	1 cut(s)	396
BbsI	GAAGAC	1 cut(s)	892
Bbv12I	GWGCWC	1 cut(s)	1441
BbvI	GCAGC	6 cut(s)	376, 423, 1009, 1031, 1108, 1254
BccI	CCATC	4 cut(s)	148, 842, 944, 1319
BceAI	ACGGC	2 cut(s)	434, 801
BcgI	CGANNNNNNTGC	2 cut(s)	366, 400
BciT130I	CCWGG	2 cut(s)	269, 1074
BciVI	GTATCC	1 cut(s)	734
BclI	TGATCA	1 cut(s)	607
BcnI	CCSGG	1 cut(s)	458
BcoDI	GTCTC	3 cut(s)	280, 628, 873
BfaI	CTAG	1 cut(s)	1490
BfmI	CTRYAG	1 cut(s)	1558
BfoI	RGCGCY	1 cut(s)	340
BfuAI	ACCTGC	2 cut(s)	302, 382
BfuI	GTATCC	1 cut(s)	734
BisI	GCNGC	9 cut(s)	340, 362, 365, 422, 437, 1020, 1023, 1122, 1243
BlsI	GCNGC	9 cut(s)	341, 363, 366, 423, 438, 1021, 1024, 1123, 1244
Bme1390I	CCNGG	3 cut(s)	269, 458, 1074
Bme18I	GGWCC	2 cut(s)	454, 1076
BmgBI	CACGTC	2 cut(s)	223, 890
BmgT120I	GGNCC	4 cut(s)	454, 787, 1076, 1340
BmiI	GGNNCC	7 cut(s)	138, 153, 159, 338, 456, 1078, 1129
BmrFI	CCNGG	3 cut(s)	269, 458, 1074
BmsI	GCATC	5 cut(s)	39, 1006, 1198, 1251, 1474
BpiI	GAAGAC	1 cut(s)	892
BpmI	CTGGAG	2 cut(s)	251, 1487
Bpu10I	CCTNAGC	1 cut(s)	260
BpuMI	CCSGG	1 cut(s)	458
Bsa29I	ATCGAT	1 cut(s)	1146
BsaAI	YACGTR	1 cut(s)	42
BsaHI	GRCGYC	3 cut(s)	234, 273, 337
BsaI	GGTCTC	1 cut(s)	873
BsaJI	CCNNGG	2 cut(s)	237, 1390
Bsc4I	CCNNNNNNNGG	1 cut(s)	1396
Bse118I	RCCGGY	4 cut(s)	148, 154, 202, 1124
Bse1I	ACTGG	6 cut(s)	69, 575, 823, 879, 1310, 1438
Bse3DI	GCAATG	2 cut(s)	817, 1579
BseBI	CCWGG	2 cut(s)	269, 1074
BseCI	ATCGAT	1 cut(s)	1146
BseDI	CCNNGG	2 cut(s)	237, 1390
BseGI	GGATG	4 cut(s)	232, 1021, 1330, 1489
BseLI	CCNNNNNNNGG	1 cut(s)	1396
BseMI	GCAATG	2 cut(s)	817, 1579
BseMII	CTCAG	3 cut(s)	616, 792, 1142
BseNI	ACTGG	6 cut(s)	69, 575, 823, 879, 1310, 1438
BseSI	GKGCMC	1 cut(s)	1441
BseXI	GCAGC	6 cut(s)	376, 423, 1009, 1031, 1108, 1254
BseYI	CCCAGC	1 cut(s)	956
BsgI	GTGCAG	2 cut(s)	232, 1008
BshFI	GGCC	6 cut(s)	202, 287, 361, 788, 1342, 1389
BshNI	GGYRCC	3 cut(s)	151, 157, 336
BshVI	ATCGAT	1 cut(s)	1146
BsiHKAI	GWGCWC	1 cut(s)	1441
BsiSI	CCGG	6 cut(s)	149, 155, 203, 458, 727, 1125
BslFI	GGGAC	2 cut(s)	1062, 1577
BslI	CCNNNNNNNGG	1 cut(s)	1396
BsmAI	GTCTC	3 cut(s)	280, 628, 873
BsmBI	CGTCTC	1 cut(s)	280
BsmFI	GGGAC	2 cut(s)	1062, 1577
BsnI	GGCC	6 cut(s)	202, 287, 361, 788, 1342, 1389
Bso31I	GGTCTC	1 cut(s)	873
Bsp1286I	GDGCHC	1 cut(s)	1441
Bsp143I	GATC	4 cut(s)	607, 715, 1147, 1462
BspACI	CCGC	5 cut(s)	134, 161, 340, 362, 421
BspANI	GGCC	6 cut(s)	202, 287, 361, 788, 1342, 1389
BspCNI	CTCAG	3 cut(s)	615, 791, 1143
BspDI	ATCGAT	1 cut(s)	1146
BspHI	TCATGA	1 cut(s)	925
BspLI	GGNNCC	7 cut(s)	138, 153, 159, 338, 456, 1078, 1129
BspMI	ACCTGC	2 cut(s)	302, 382
BspT107I	GGYRCC	3 cut(s)	151, 157, 336
BspTNI	GGTCTC	1 cut(s)	873
BsrDI	GCAATG	2 cut(s)	817, 1579
BsrFI	RCCGGY	4 cut(s)	148, 154, 202, 1124
BsrI	ACTGG	6 cut(s)	69, 575, 823, 879, 1310, 1438
BssAI	RCCGGY	4 cut(s)	148, 154, 202, 1124
BssECI	CCNNGG	2 cut(s)	237, 1390
BssMI	GATC	4 cut(s)	607, 715, 1147, 1462
BssNI	GRCGYC	3 cut(s)	234, 273, 337
BssSI	CACGAG	1 cut(s)	396
BssT1I	CCWWGG	1 cut(s)	237
Bst2BI	CACGAG	1 cut(s)	396
Bst2UI	CCWGG	2 cut(s)	269, 1074
Bst4CI	ACNGT	8 cut(s)	26, 84, 91, 639, 856, 985, 1029, 1613
BstACI	GRCGYC	3 cut(s)	234, 273, 337
BstAPI	GCANNNNNTGC	1 cut(s)	1031
BstBAI	YACGTR	1 cut(s)	42
BstC8I	GCNNGC	3 cut(s)	204, 748, 900
BstDEI	CTNAG	6 cut(s)	260, 534, 602, 778, 999, 1151
BstF5I	GGATG	4 cut(s)	232, 1021, 1330, 1489
BstH2I	RGCGCY	1 cut(s)	340
BstHHI	GCGC	3 cut(s)	339, 426, 617
BstKTI	GATC	4 cut(s)	610, 718, 1150, 1465
BstMAI	GTCTC	3 cut(s)	280, 628, 873
BstMBI	GATC	4 cut(s)	607, 715, 1147, 1462
BstMWI	GCNNNNNNNGC	8 cut(s)	203, 208, 261, 858, 908, 1031, 1239, 1251
BstNI	CCWGG	2 cut(s)	269, 1074
BstNSI	RCATGY	1 cut(s)	902
BstSCI	CCNGG	3 cut(s)	267, 456, 1072
BstSFI	CTRYAG	1 cut(s)	1558
BstSLI	GKGCMC	1 cut(s)	1441
BstV1I	GCAGC	6 cut(s)	376, 423, 1009, 1031, 1108, 1254
BstV2I	GAAGAC	1 cut(s)	892
BstXI	CCANNNNNNTGG	1 cut(s)	1534
Bsu15I	ATCGAT	1 cut(s)	1146
BsuI	GTATCC	1 cut(s)	734
BsuRI	GGCC	6 cut(s)	202, 287, 361, 788, 1342, 1389
BsuTUI	ATCGAT	1 cut(s)	1146
BtgZI	GCGATG	1 cut(s)	1274
BtrI	CACGTC	2 cut(s)	223, 890
BtsCI	GGATG	4 cut(s)	232, 1021, 1330, 1489
BtsI	GCAGTG	1 cut(s)	244
BtsIMutI	CAGTG	7 cut(s)	80, 244, 549, 610, 816, 886, 1431
BveI	ACCTGC	2 cut(s)	302, 382
Cac8I	GCNNGC	3 cut(s)	204, 748, 900
CaiI	CAGNNNCTG	1 cut(s)	956
CciI	TCATGA	1 cut(s)	925
CfoI	GCGC	3 cut(s)	339, 426, 617
Cfr10I	RCCGGY	4 cut(s)	148, 154, 202, 1124
Cfr13I	GGNCC	4 cut(s)	454, 787, 1076, 1340
ClaI	ATCGAT	1 cut(s)	1146
CseI	GACGC	2 cut(s)	217, 242
Csp6I	GTAC	2 cut(s)	22, 301
CviQI	GTAC	2 cut(s)	22, 301
DdeI	CTNAG	6 cut(s)	260, 534, 602, 778, 999, 1151
DinI	GGCGCC	1 cut(s)	338
DpnI	GATC	4 cut(s)	609, 717, 1149, 1464
DpnII	GATC	4 cut(s)	607, 715, 1147, 1462
DraI	TTTAAA	1 cut(s)	906
DraIII	CACNNNGTG	1 cut(s)	605
EaeI	YGGCCR	3 cut(s)	200, 285, 359
EciI	GGCGGA	1 cut(s)	149
Eco130I	CCWWGG	1 cut(s)	237
Eco31I	GGTCTC	1 cut(s)	873
Eco32I	GATATC	1 cut(s)	1273
Eco47I	GGWCC	2 cut(s)	454, 1076
Eco57I	CTGAAG	2 cut(s)	331, 1552
EcoRII	CCWGG	2 cut(s)	267, 1072
EcoRV	GATATC	1 cut(s)	1273
EcoT14I	CCWWGG	1 cut(s)	237
EgeI	GGCGCC	1 cut(s)	338
EheI	GGCGCC	1 cut(s)	338
ErhI	CCWWGG	1 cut(s)	237
Esp3I	CGTCTC	1 cut(s)	280
FalI	AAGNNNNNCTT	2 cut(s)	610, 642
FaqI	GGGAC	2 cut(s)	1062, 1577
FauNDI	CATATG	1 cut(s)	1533
FbaI	TGATCA	1 cut(s)	607
Fnu4HI	GCNGC	9 cut(s)	340, 362, 365, 422, 437, 1020, 1023, 1122, 1243
FokI	GGATG	4 cut(s)	239, 1028, 1337, 1496
Fsp4HI	GCNGC	9 cut(s)	340, 362, 365, 422, 437, 1020, 1023, 1122, 1243
FspBI	CTAG	1 cut(s)	1490
GlaI	GCGC	3 cut(s)	338, 425, 616
GluI	GCNGC	9 cut(s)	340, 362, 365, 422, 437, 1020, 1023, 1122, 1243
GsaI	CCCAGC	1 cut(s)	960
GsuI	CTGGAG	2 cut(s)	251, 1487
HaeII	RGCGCY	1 cut(s)	340
HaeIII	GGCC	6 cut(s)	202, 287, 361, 788, 1342, 1389
HapII	CCGG	6 cut(s)	149, 155, 203, 458, 727, 1125
HgaI	GACGC	2 cut(s)	217, 242
HhaI	GCGC	3 cut(s)	339, 426, 617
Hin1I	GRCGYC	3 cut(s)	234, 273, 337
Hin6I	GCGC	3 cut(s)	337, 424, 615
HinP1I	GCGC	3 cut(s)	337, 424, 615
HincII	GTYRAC	1 cut(s)	496
HindII	GTYRAC	1 cut(s)	496
HpaII	CCGG	6 cut(s)	149, 155, 203, 458, 727, 1125
HphI	GGTGA	2 cut(s)	135, 1616
Hpy166II	GTNNAC	5 cut(s)	87, 232, 496, 1331, 1439
Hpy188I	TCNGA	6 cut(s)	120, 325, 454, 715, 796, 1152
Hpy188III	TCNNGA	5 cut(s)	396, 926, 1276, 1466, 1545
Hpy8I	GTNNAC	5 cut(s)	87, 232, 496, 1331, 1439
Hpy99I	CGWCG	3 cut(s)	169, 211, 756
HpyAV	CCTTC	5 cut(s)	65, 733, 1050, 1227, 1595
HpyCH4III	ACNGT	8 cut(s)	26, 84, 91, 639, 856, 985, 1029, 1613
HpyCH4IV	ACGT	4 cut(s)	41, 222, 273, 889
HpyCH4V	TGCA	7 cut(s)	249, 297, 377, 439, 1019, 1025, 1439
HpyF10VI	GCNNNNNNNGC	8 cut(s)	203, 208, 261, 858, 908, 1031, 1239, 1251
HpyF3I	CTNAG	6 cut(s)	260, 534, 602, 778, 999, 1151
HpySE526I	ACGT	4 cut(s)	41, 222, 273, 889
Hsp92I	GRCGYC	3 cut(s)	234, 273, 337
HspAI	GCGC	3 cut(s)	337, 424, 615
KasI	GGCGCC	1 cut(s)	336
KroI	GCCGGC	1 cut(s)	202
KroNI	GCCGGC	1 cut(s)	204
Ksp22I	TGATCA	1 cut(s)	607
Kzo9I	GATC	4 cut(s)	607, 715, 1147, 1462
LmnI	GCTCC	3 cut(s)	136, 716, 1293
Lsp1109I	GCAGC	6 cut(s)	376, 423, 1009, 1031, 1108, 1254
LweI	GCATC	5 cut(s)	39, 1006, 1198, 1251, 1474
MaeI	CTAG	1 cut(s)	1490
MaeII	ACGT	4 cut(s)	41, 222, 273, 889
MaeIII	GTNAC	9 cut(s)	595, 700, 767, 781, 979, 985, 1312, 1378, 1513
MalI	GATC	4 cut(s)	609, 717, 1149, 1464
MboI	GATC	4 cut(s)	607, 715, 1147, 1462
MboII	GAAGA	6 cut(s)	337, 520, 857, 897, 1035, 1550
MfeI	CAATTG	1 cut(s)	1106
MhlI	GDGCHC	1 cut(s)	1441
MlsI	TGGCCA	1 cut(s)	287
MluCI	AATT	7 cut(s)	440, 621, 800, 941, 1068, 1106, 1509
MluNI	TGGCCA	1 cut(s)	287
Mly113I	GGCGCC	1 cut(s)	337
MlyI	GAGTC	3 cut(s)	320, 1342, 1433
MmeI	TCCRAC	4 cut(s)	303, 348, 1302, 1452
Mox20I	TGGCCA	1 cut(s)	287
MroNI	GCCGGC	1 cut(s)	202
MroXI	GAANNNNTTC	1 cut(s)	1063
MscI	TGGCCA	1 cut(s)	287
MseI	TTAA	5 cut(s)	575, 648, 905, 1413, 1593
MslI	CAYNNNNRTG	1 cut(s)	287
Msp20I	TGGCCA	1 cut(s)	287
MspA1I	CMGCKG	1 cut(s)	1022
MspI	CCGG	6 cut(s)	149, 155, 203, 458, 727, 1125
MspR9I	CCNGG	3 cut(s)	269, 458, 1074
MunI	CAATTG	1 cut(s)	1106
MvaI	CCWGG	2 cut(s)	269, 1074
MwoI	GCNNNNNNNGC	8 cut(s)	203, 208, 261, 858, 908, 1031, 1239, 1251
NaeI	GCCGGC	1 cut(s)	204
NarI	GGCGCC	1 cut(s)	337
NciI	CCSGG	1 cut(s)	458
NdeI	CATATG	1 cut(s)	1533
NdeII	GATC	4 cut(s)	607, 715, 1147, 1462
NgoMIV	GCCGGC	1 cut(s)	202
NlaIV	GGNNCC	7 cut(s)	138, 153, 159, 338, 456, 1078, 1129
NmeAIII	GCCGAG	2 cut(s)	173, 1415
NmuCI	GTSAC	2 cut(s)	595, 767
NspI	RCATGY	1 cut(s)	902
PaeI	GCATGC	1 cut(s)	902
PagI	TCATGA	1 cut(s)	925
PaqCI	CACCTGC	1 cut(s)	382
PcsI	WCGNNNNNNNCGW	1 cut(s)	321
PdiI	GCCGGC	1 cut(s)	204
PdmI	GAANNNNTTC	1 cut(s)	1063
PfeI	GAWTC	7 cut(s)	184, 587, 995, 1364, 1403, 1541, 1630
PflFI	GACNNNGTC	1 cut(s)	891
PfoI	TCCNGGA	1 cut(s)	267
PkrI	GCNGC	9 cut(s)	341, 363, 366, 423, 438, 1021, 1024, 1123, 1244
PleI	GAGTC	3 cut(s)	320, 1342, 1432
PluTI	GGCGCC	1 cut(s)	340
PpsI	GAGTC	3 cut(s)	320, 1342, 1432
Ppu21I	YACGTR	1 cut(s)	42
PsiI	TTATAA	1 cut(s)	1085
Psp6I	CCWGG	2 cut(s)	267, 1072
PspFI	CCCAGC	1 cut(s)	956
PspGI	CCWGG	2 cut(s)	267, 1072
PspN4I	GGNNCC	7 cut(s)	138, 153, 159, 338, 456, 1078, 1129
PspPI	GGNCC	4 cut(s)	454, 787, 1076, 1340
PstNI	CAGNNNCTG	1 cut(s)	956
PsyI	GACNNNGTC	1 cut(s)	891
PvuII	CAGCTG	1 cut(s)	1022
RsaI	GTAC	2 cut(s)	23, 302
RsaNI	GTAC	2 cut(s)	22, 301
RseI	CAYNNNNRTG	1 cut(s)	287
SaqAI	TTAA	5 cut(s)	575, 648, 905, 1413, 1593
SatI	GCNGC	9 cut(s)	340, 362, 365, 422, 437, 1020, 1023, 1122, 1243
Sau3AI	GATC	4 cut(s)	607, 715, 1147, 1462
Sau96I	GGNCC	4 cut(s)	454, 787, 1076, 1340
SchI	GAGTC	3 cut(s)	320, 1342, 1433
ScrFI	CCNGG	3 cut(s)	269, 458, 1074
SduI	GDGCHC	1 cut(s)	1441
SfaNI	GCATC	5 cut(s)	39, 1006, 1198, 1251, 1474
SfcI	CTRYAG	1 cut(s)	1558
SfoI	GGCGCC	1 cut(s)	338
SinI	GGWCC	2 cut(s)	454, 1076
SmiMI	CAYNNNNRTG	1 cut(s)	287
SphI	GCATGC	1 cut(s)	902
Sse9I	AATT	7 cut(s)	440, 621, 800, 941, 1068, 1106, 1509
SsiI	CCGC	5 cut(s)	134, 161, 340, 362, 421
SspDI	GGCGCC	1 cut(s)	336
SspI	AATATT	1 cut(s)	1417
SspMI	CTAG	1 cut(s)	1490
StyD4I	CCNGG	3 cut(s)	267, 456, 1072
StyI	CCWWGG	1 cut(s)	237
TaaI	ACNGT	8 cut(s)	26, 84, 91, 639, 856, 985, 1029, 1613
TaiI	ACGT	4 cut(s)	44, 225, 276, 892
TaqI	TCGA	3 cut(s)	667, 1146, 1181
TasI	AATT	7 cut(s)	440, 621, 800, 941, 1068, 1106, 1509
TauI	GCSGC	3 cut(s)	342, 364, 424
TfiI	GAWTC	7 cut(s)	184, 587, 995, 1364, 1403, 1541, 1630
Tru1I	TTAA	5 cut(s)	575, 648, 905, 1413, 1593
Tru9I	TTAA	5 cut(s)	575, 648, 905, 1413, 1593
TscAI	CASTG	7 cut(s)	87, 251, 549, 610, 823, 886, 1438
TseFI	GTSAC	2 cut(s)	595, 767
TseI	GCWGC	6 cut(s)	364, 436, 1019, 1022, 1121, 1242
Tsp45I	GTSAC	2 cut(s)	595, 767
TspDTI	ATGAA	9 cut(s)	463, 528, 666, 1035, 1106, 1116, 1203, 1356, 1569
TspGWI	ACGGA	1 cut(s)	443
TspRI	CASTG	7 cut(s)	87, 251, 549, 610, 823, 886, 1438
Tth111I	GACNNNGTC	1 cut(s)	891
VneI	GTGCAC	1 cut(s)	1437
VpaK11BI	GGWCC	2 cut(s)	454, 1076
XceI	RCATGY	1 cut(s)	902
XcmI	CCANNNNNNNNNTGG	1 cut(s)	195
XmnI	GAANNNNTTC	1 cut(s)	1063
XspI	CTAG	1 cut(s)	1490
ZraI	GACGTC	1 cut(s)	274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.