Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0015677

Physical Location & Seq

Genomic Coordinates Forward (+)

78050439 .. 78054089

Gene Structure 3651 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G050420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGCGGAGCCATCACCACCGGCACCGCCACCGCCGACGATGAGTGAGAACCAGAATCCAAGCTCGGCGTGGCCGGCGACGCACATGACTGACGTGGATGTGGACGCCTTGGCTCACTGCACCAGCTACCTTAGCCTCCAGGATGTCTCCAACATGGCCATGACCTGCAAGTACCTCCAAAAAGTCGCCTACTCCGACTCTATCTGGCGCCGCTTCTTCAGGGAGAGTTGGCCGCAGCAAACACCTGCATTTGCTTCGCCAACTTCAGGAGTCAGGGAAGCGTATTTACGGCGGCGCAAGGATTTGCTGCAATTCAAGTTTTCGGACCCGGTTGTTGCCGATTTCATCTCAGATACAAAGCCTGTTGACCACATTTTATTGAATGAAAAGCATATAATCTTCTCTAAGGGTTCAGTGATACAAGTGATAAAGATTGATGACTGGTTAAGTGGGAGGGATTCGGTTGTCACACTCAGTGATCACAGCGCAAGAATTACTTGTATGAGACTGTTTTCGCTTAATGAAACATCTTTATATCGAAGTGAAGCACAAAGGAAAGAGAATGTTTTGGTAACTTCAAGCTCCGATCATGGTATCCGGCTATGGTGGAAGGGTGCTTGCCGACGATGTTTTACAGGTCACAAAGGCTCAGTTACGGCCCTGTCTGATAAATTGTTAGGCAATGGCACTGGAAAAGTATTGGCAAGTGGAGGGGAAGATGGCACAGTTCGCCTTTGGTCTCTTACTTCCAGTGGAAGACGTGGTCAGCATGCTTTAAAGGCTACTTTCTATGGTCATGAGAAACCCATCAAATTGATGTCAGTTGCTGGGCATAAAACTTCTATTTTGGTGACTGTTACAGGAGATTCTAAGGTAAGGTTGTGGGATGCAGCTGCACAGTCTGCTGTTCCTTCTTCATCTTGTGTGGGAATGACTTCAATTCCTGGTCCCCTTATAAACATGAAGTGCCATGAACAATTGCTCTATCTTGCTGCCGGTTCCTCTGTTGCTGTAATCGATCTGAGGACAATGAGAAAAGTTCTCCCATATTCGATAGATGAAAAGCTATGTTCTTTTGATGCCATTCCTTCAAAATCCTTGTGCTGTGTTGGCAGCAGTAATGGCAGAGCGATGCTTTACGATATCAGGAGGGTCAAGCTCCCCAACTCAAAAGCAGAACCGGTAACCGAGTTGGATGGTGGACACATTGGGCCATTGACTCACTTGAACATGGATTCATACAAAATAGTTACAGGAGGCCGAGGCAGGGGAGATTCTCATGTTAATATTTGGGAGTCCAACACTGGTGCACTCGTCAGTTCCCTGACTTGTGATCTGGAGGAAGCAAGTATGGATGCCCTAGCTGTAAATGGGTGTCAAATTGTTACTGCCAACACCAGCCATATGGAAGATTCGGGAGTTCTACGCTATAGGGACTTCAGCAACGCTTCATGTCCTGCTGTTAATAGTGAAGGTGATGACCGTGTTTCAAAGTTTTGGAATCCAGAATCTTATAGTGATAGTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000428 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005737 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010604 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0016604 GO:0016607 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0030880 GO:0030914 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0033276 GO:0035770 GO:0036211 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070461 GO:0071704 GO:0071840 GO:0080090 GO:0090575 GO:0140110 GO:1901564 GO:1902493 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:1990904 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

F-box F-box-like WD40

Protein Analysis

509

Amino Acids

55.67

Weight (kDa)

7.57

Isoelectric Point (pI)

45.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	39 - 74	2.4e-06	F-box-like
WD40_CDC20-Fz	PF24807	153 - 303	1.1e-09	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	167 - 384	1.6e-12	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	184 - 303	1.8e-12	WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	186 - 300	4e-06	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	187 - 297	5e-07	WDR3 second beta-propeller domain
Beta-prop_SCAP	PF24017	190 - 298	7.6e-06	SCAP Beta-propeller
WD40	PF00400	206 - 247	1.4e-07	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	228 - 443	2.4e-19	THOC3 beta-propeller domain
WD40_Prp19	PF24814	231 - 445	6.1e-10	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015677)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g49170
malus_domestica	MD09G1047900.v1.1 MD17G1048000.v1.1 MD17G1048100.v1.1
prunus_persica	Prupe.3G271100_v2.0.a1
pyrus_communis	pycom17g04280
rosa_chinensis	RchiOBHm_Chr2g0169041
rosa_laevigata	RLG00000021826
rosa_multiflora	Rmu_ssc0000393.1_g000025
rosa_roxburghii	Rroxscaffold_2G00082510
rosa_rugosa	Rorug02G0536500
rosa_samantha	Rh2AG608000 Rh2BG620700 Rh2CG589600 Rh2DG631300
rosa_wichuraiana	Rw2G050420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	956
AarI	CACCTGC	1 cut(s)	253
Acc36I	ACCTGC	2 cut(s)	173, 253
AccB1I	GGYRCC	2 cut(s)	22, 207
AciI	CCGC	6 cut(s)	5, 26, 32, 211, 233, 292
AcoI	YGGCCR	3 cut(s)	71, 156, 230
AcuI	CTGAAG	3 cut(s)	202, 249, 1423
AcyI	GRCGYC	2 cut(s)	105, 208
AdeI	CACNNNGTG	1 cut(s)	476
AfaI	GTAC	1 cut(s)	173
AfiI	CCNNNNNNNGG	2 cut(s)	266, 1267
AgeI	ACCGGT	1 cut(s)	1180
AgsI	TTSAA	7 cut(s)	316, 382, 579, 939, 1092, 1228, 1491
AjiI	CACGTC	2 cut(s)	94, 761
AjnI	CCWGG	2 cut(s)	138, 943
AluBI	AGCT	7 cut(s)	63, 126, 582, 893, 1066, 1159, 1364
AluI	AGCT	7 cut(s)	63, 126, 582, 893, 1066, 1159, 1364
Alw21I	GWGCWC	1 cut(s)	1312
Alw26I	GTCTC	3 cut(s)	151, 499, 744
Alw44I	GTGCAC	1 cut(s)	1308
AlwNI	CAGNNNCTG	1 cut(s)	827
AoxI	GGCC	6 cut(s)	71, 156, 230, 657, 1211, 1258
ApaLI	GTGCAC	1 cut(s)	1308
ApeKI	GCWGC	6 cut(s)	235, 307, 890, 893, 992, 1113
AsiGI	ACCGGT	1 cut(s)	1180
Asp700I	GAANNNNTTC	1 cut(s)	934
AspLEI	GCGC	3 cut(s)	210, 297, 488
AspS9I	GGNCC	4 cut(s)	325, 658, 947, 1211
AsuC2I	CCSGG	1 cut(s)	329
AsuHPI	GGTGA	3 cut(s)	6, 862, 1487
AvaII	GGWCC	2 cut(s)	325, 947
BaeGI	GKGCMC	1 cut(s)	1312
BalI	TGGCCA	1 cut(s)	158
BanI	GGYRCC	2 cut(s)	22, 207
BarI	GAAGNNNNNNTAC	2 cut(s)	270, 302
BbsI	GAAGAC	1 cut(s)	763
Bbv12I	GWGCWC	1 cut(s)	1312
BbvI	GCAGC	6 cut(s)	247, 294, 880, 902, 979, 1125
BccI	CCATC	4 cut(s)	19, 713, 815, 1190
BceAI	ACGGC	2 cut(s)	305, 672
BcgI	CGANNNNNNTGC	2 cut(s)	237, 271
BciT130I	CCWGG	2 cut(s)	140, 945
BciVI	GTATCC	1 cut(s)	605
BclI	TGATCA	1 cut(s)	478
BcnI	CCSGG	1 cut(s)	329
BcoDI	GTCTC	3 cut(s)	151, 499, 744
BfaI	CTAG	1 cut(s)	1361
BfmI	CTRYAG	1 cut(s)	1429
BfoI	RGCGCY	1 cut(s)	211
BfuAI	ACCTGC	2 cut(s)	173, 253
BfuI	GTATCC	1 cut(s)	605
BisI	GCNGC	9 cut(s)	211, 233, 236, 293, 308, 891, 894, 993, 1114
BlsI	GCNGC	9 cut(s)	212, 234, 237, 294, 309, 892, 895, 994, 1115
Bme1390I	CCNGG	3 cut(s)	140, 329, 945
Bme18I	GGWCC	2 cut(s)	325, 947
BmgBI	CACGTC	2 cut(s)	94, 761
BmgT120I	GGNCC	4 cut(s)	325, 658, 947, 1211
BmiI	GGNNCC	6 cut(s)	9, 24, 209, 327, 949, 1000
BmrFI	CCNGG	3 cut(s)	140, 329, 945
BmsI	GCATC	4 cut(s)	877, 1069, 1122, 1345
BpiI	GAAGAC	1 cut(s)	763
BpmI	CTGGAG	2 cut(s)	122, 1358
Bpu10I	CCTNAGC	1 cut(s)	131
BpuMI	CCSGG	1 cut(s)	329
Bsa29I	ATCGAT	1 cut(s)	1017
BsaHI	GRCGYC	2 cut(s)	105, 208
BsaI	GGTCTC	1 cut(s)	744
BsaJI	CCNNGG	2 cut(s)	108, 1261
BsaWI	WCCGGW	1 cut(s)	1180
Bsc4I	CCNNNNNNNGG	2 cut(s)	266, 1267
Bse118I	RCCGGY	4 cut(s)	19, 73, 995, 1180
Bse1I	ACTGG	4 cut(s)	446, 694, 750, 1309
Bse3DI	GCAATG	1 cut(s)	688
BseBI	CCWGG	2 cut(s)	140, 945
BseCI	ATCGAT	1 cut(s)	1017
BseDI	CCNNGG	2 cut(s)	108, 1261
BseGI	GGATG	5 cut(s)	103, 148, 892, 1201, 1360
BseLI	CCNNNNNNNGG	2 cut(s)	266, 1267
BseMI	GCAATG	1 cut(s)	688
BseMII	CTCAG	4 cut(s)	363, 487, 663, 1013
BseNI	ACTGG	4 cut(s)	446, 694, 750, 1309
BseSI	GKGCMC	1 cut(s)	1312
BseXI	GCAGC	6 cut(s)	247, 294, 880, 902, 979, 1125
BseYI	CCCAGC	1 cut(s)	827
BsgI	GTGCAG	2 cut(s)	103, 879
BshFI	GGCC	6 cut(s)	73, 158, 232, 659, 1213, 1260
BshNI	GGYRCC	2 cut(s)	22, 207
BshTI	ACCGGT	1 cut(s)	1180
BshVI	ATCGAT	1 cut(s)	1017
BsiHKAI	GWGCWC	1 cut(s)	1312
BsiSI	CCGG	6 cut(s)	20, 74, 329, 598, 996, 1181
BslFI	GGGAC	2 cut(s)	933, 1448
BslI	CCNNNNNNNGG	2 cut(s)	266, 1267
BsmAI	GTCTC	3 cut(s)	151, 499, 744
BsmFI	GGGAC	2 cut(s)	933, 1448
BsnI	GGCC	6 cut(s)	73, 158, 232, 659, 1213, 1260
Bso31I	GGTCTC	1 cut(s)	744
Bsp1286I	GDGCHC	1 cut(s)	1312
Bsp143I	GATC	4 cut(s)	478, 586, 1018, 1333
BspACI	CCGC	6 cut(s)	5, 26, 32, 211, 233, 292
BspANI	GGCC	6 cut(s)	73, 158, 232, 659, 1213, 1260
BspCNI	CTCAG	4 cut(s)	362, 486, 662, 1014
BspDI	ATCGAT	1 cut(s)	1017
BspHI	TCATGA	1 cut(s)	796
BspLI	GGNNCC	6 cut(s)	9, 24, 209, 327, 949, 1000
BspMI	ACCTGC	2 cut(s)	173, 253
BspT107I	GGYRCC	2 cut(s)	22, 207
BspTNI	GGTCTC	1 cut(s)	744
BsrDI	GCAATG	1 cut(s)	688
BsrFI	RCCGGY	4 cut(s)	19, 73, 995, 1180
BsrI	ACTGG	4 cut(s)	446, 694, 750, 1309
BssAI	RCCGGY	4 cut(s)	19, 73, 995, 1180
BssECI	CCNNGG	2 cut(s)	108, 1261
BssMI	GATC	4 cut(s)	478, 586, 1018, 1333
BssNI	GRCGYC	2 cut(s)	105, 208
BssT1I	CCWWGG	1 cut(s)	108
Bst2UI	CCWGG	2 cut(s)	140, 945
Bst4CI	ACNGT	5 cut(s)	510, 727, 856, 900, 1484
BstACI	GRCGYC	2 cut(s)	105, 208
BstAPI	GCANNNNNTGC	1 cut(s)	902
BstC8I	GCNNGC	3 cut(s)	75, 619, 771
BstDEI	CTNAG	7 cut(s)	131, 349, 405, 473, 649, 870, 1022
BstEII	GGTNACC	1 cut(s)	1183
BstF5I	GGATG	5 cut(s)	103, 148, 892, 1201, 1360
BstH2I	RGCGCY	1 cut(s)	211
BstHHI	GCGC	3 cut(s)	210, 297, 488
BstKTI	GATC	4 cut(s)	481, 589, 1021, 1336
BstMAI	GTCTC	3 cut(s)	151, 499, 744
BstMBI	GATC	4 cut(s)	478, 586, 1018, 1333
BstMWI	GCNNNNNNNGC	8 cut(s)	74, 79, 132, 729, 779, 902, 1110, 1122
BstNI	CCWGG	2 cut(s)	140, 945
BstNSI	RCATGY	1 cut(s)	773
BstPI	GGTNACC	1 cut(s)	1183
BstSCI	CCNGG	3 cut(s)	138, 327, 943
BstSFI	CTRYAG	1 cut(s)	1429
BstSLI	GKGCMC	1 cut(s)	1312
BstV1I	GCAGC	6 cut(s)	247, 294, 880, 902, 979, 1125
BstV2I	GAAGAC	1 cut(s)	763
BstXI	CCANNNNNNTGG	1 cut(s)	1405
Bsu15I	ATCGAT	1 cut(s)	1017
BsuI	GTATCC	1 cut(s)	605
BsuRI	GGCC	6 cut(s)	73, 158, 232, 659, 1213, 1260
BsuTUI	ATCGAT	1 cut(s)	1017
BtgZI	GCGATG	1 cut(s)	1145
BtrI	CACGTC	2 cut(s)	94, 761
BtsCI	GGATG	5 cut(s)	103, 148, 892, 1201, 1360
BtsI	GCAGTG	1 cut(s)	115
BtsIMutI	CAGTG	6 cut(s)	115, 420, 481, 687, 757, 1302
BveI	ACCTGC	2 cut(s)	173, 253
Cac8I	GCNNGC	3 cut(s)	75, 619, 771
CaiI	CAGNNNCTG	1 cut(s)	827
CciI	TCATGA	1 cut(s)	796
CfoI	GCGC	3 cut(s)	210, 297, 488
Cfr10I	RCCGGY	4 cut(s)	19, 73, 995, 1180
Cfr13I	GGNCC	4 cut(s)	325, 658, 947, 1211
ClaI	ATCGAT	1 cut(s)	1017
CseI	GACGC	2 cut(s)	88, 113
Csp6I	GTAC	1 cut(s)	172
CspAI	ACCGGT	1 cut(s)	1180
CviQI	GTAC	1 cut(s)	172
DdeI	CTNAG	7 cut(s)	131, 349, 405, 473, 649, 870, 1022
DinI	GGCGCC	1 cut(s)	209
DpnI	GATC	4 cut(s)	480, 588, 1020, 1335
DpnII	GATC	4 cut(s)	478, 586, 1018, 1333
DraI	TTTAAA	1 cut(s)	777
DraIII	CACNNNGTG	1 cut(s)	476
EaeI	YGGCCR	3 cut(s)	71, 156, 230
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	1 cut(s)	108
Eco31I	GGTCTC	1 cut(s)	744
Eco32I	GATATC	1 cut(s)	1144
Eco47I	GGWCC	2 cut(s)	325, 947
Eco57I	CTGAAG	3 cut(s)	202, 249, 1423
Eco91I	GGTNACC	1 cut(s)	1183
EcoO65I	GGTNACC	1 cut(s)	1183
EcoRII	CCWGG	2 cut(s)	138, 943
EcoRV	GATATC	1 cut(s)	1144
EcoT14I	CCWWGG	1 cut(s)	108
EgeI	GGCGCC	1 cut(s)	209
EheI	GGCGCC	1 cut(s)	209
ErhI	CCWWGG	1 cut(s)	108
FalI	AAGNNNNNCTT	2 cut(s)	481, 513
FaqI	GGGAC	2 cut(s)	933, 1448
FauNDI	CATATG	1 cut(s)	1404
FbaI	TGATCA	1 cut(s)	478
Fnu4HI	GCNGC	9 cut(s)	211, 233, 236, 293, 308, 891, 894, 993, 1114
FokI	GGATG	5 cut(s)	110, 155, 899, 1208, 1367
Fsp4HI	GCNGC	9 cut(s)	211, 233, 236, 293, 308, 891, 894, 993, 1114
FspBI	CTAG	1 cut(s)	1361
GlaI	GCGC	3 cut(s)	209, 296, 487
GluI	GCNGC	9 cut(s)	211, 233, 236, 293, 308, 891, 894, 993, 1114
GsaI	CCCAGC	1 cut(s)	831
GsuI	CTGGAG	2 cut(s)	122, 1358
HaeII	RGCGCY	1 cut(s)	211
HaeIII	GGCC	6 cut(s)	73, 158, 232, 659, 1213, 1260
HapII	CCGG	6 cut(s)	20, 74, 329, 598, 996, 1181
HgaI	GACGC	2 cut(s)	88, 113
HhaI	GCGC	3 cut(s)	210, 297, 488
Hin1I	GRCGYC	2 cut(s)	105, 208
Hin6I	GCGC	3 cut(s)	208, 295, 486
HinP1I	GCGC	3 cut(s)	208, 295, 486
HincII	GTYRAC	1 cut(s)	367
HindII	GTYRAC	1 cut(s)	367
HpaII	CCGG	6 cut(s)	20, 74, 329, 598, 996, 1181
HphI	GGTGA	3 cut(s)	6, 862, 1487
Hpy166II	GTNNAC	4 cut(s)	103, 367, 1202, 1310
Hpy188I	TCNGA	6 cut(s)	196, 325, 352, 586, 667, 1023
Hpy188III	TCNNGA	6 cut(s)	267, 797, 1147, 1337, 1416, 1505
Hpy8I	GTNNAC	4 cut(s)	103, 367, 1202, 1310
Hpy99I	CGWCG	3 cut(s)	40, 82, 627
HpyAV	CCTTC	4 cut(s)	604, 921, 1098, 1466
HpyCH4III	ACNGT	5 cut(s)	510, 727, 856, 900, 1484
HpyCH4IV	ACGT	2 cut(s)	93, 760
HpyCH4V	TGCA	7 cut(s)	120, 168, 248, 310, 890, 896, 1310
HpyF10VI	GCNNNNNNNGC	8 cut(s)	74, 79, 132, 729, 779, 902, 1110, 1122
HpyF3I	CTNAG	7 cut(s)	131, 349, 405, 473, 649, 870, 1022
HpySE526I	ACGT	2 cut(s)	93, 760
Hsp92I	GRCGYC	2 cut(s)	105, 208
HspAI	GCGC	3 cut(s)	208, 295, 486
KasI	GGCGCC	1 cut(s)	207
KroI	GCCGGC	1 cut(s)	73
KroNI	GCCGGC	1 cut(s)	75
Ksp22I	TGATCA	1 cut(s)	478
Kzo9I	GATC	4 cut(s)	478, 586, 1018, 1333
LmnI	GCTCC	3 cut(s)	7, 587, 1164
Lsp1109I	GCAGC	6 cut(s)	247, 294, 880, 902, 979, 1125
LweI	GCATC	4 cut(s)	877, 1069, 1122, 1345
MaeI	CTAG	1 cut(s)	1361
MaeII	ACGT	2 cut(s)	93, 760
MaeIII	GTNAC	9 cut(s)	466, 571, 638, 652, 850, 856, 1183, 1249, 1384
MalI	GATC	4 cut(s)	480, 588, 1020, 1335
MboI	GATC	4 cut(s)	478, 586, 1018, 1333
MboII	GAAGA	6 cut(s)	208, 391, 728, 768, 906, 1421
MfeI	CAATTG	1 cut(s)	977
MhlI	GDGCHC	1 cut(s)	1312
MlsI	TGGCCA	1 cut(s)	158
MluCI	AATT	7 cut(s)	311, 492, 671, 812, 939, 977, 1380
MluNI	TGGCCA	1 cut(s)	158
Mly113I	GGCGCC	1 cut(s)	208
MlyI	GAGTC	4 cut(s)	191, 279, 1213, 1304
MmeI	TCCRAC	4 cut(s)	174, 219, 1173, 1323
Mox20I	TGGCCA	1 cut(s)	158
MroNI	GCCGGC	1 cut(s)	73
MroXI	GAANNNNTTC	1 cut(s)	934
MscI	TGGCCA	1 cut(s)	158
MseI	TTAA	5 cut(s)	446, 519, 776, 1284, 1464
MslI	CAYNNNNRTG	1 cut(s)	158
Msp20I	TGGCCA	1 cut(s)	158
MspA1I	CMGCKG	1 cut(s)	893
MspI	CCGG	6 cut(s)	20, 74, 329, 598, 996, 1181
MspR9I	CCNGG	3 cut(s)	140, 329, 945
MunI	CAATTG	1 cut(s)	977
MvaI	CCWGG	2 cut(s)	140, 945
MwoI	GCNNNNNNNGC	8 cut(s)	74, 79, 132, 729, 779, 902, 1110, 1122
NaeI	GCCGGC	1 cut(s)	75
NarI	GGCGCC	1 cut(s)	208
NciI	CCSGG	1 cut(s)	329
NdeI	CATATG	1 cut(s)	1404
NdeII	GATC	4 cut(s)	478, 586, 1018, 1333
NgoMIV	GCCGGC	1 cut(s)	73
NlaIV	GGNNCC	6 cut(s)	9, 24, 209, 327, 949, 1000
NmeAIII	GCCGAG	2 cut(s)	44, 1286
NmuCI	GTSAC	3 cut(s)	466, 638, 850
NspI	RCATGY	1 cut(s)	773
PaeI	GCATGC	1 cut(s)	773
PagI	TCATGA	1 cut(s)	796
PaqCI	CACCTGC	1 cut(s)	253
PcsI	WCGNNNNNNNCGW	1 cut(s)	192
PdiI	GCCGGC	1 cut(s)	75
PdmI	GAANNNNTTC	1 cut(s)	934
PfeI	GAWTC	8 cut(s)	55, 458, 866, 1235, 1274, 1412, 1501, 1508
PflFI	GACNNNGTC	1 cut(s)	762
PfoI	TCCNGGA	1 cut(s)	138
PinAI	ACCGGT	1 cut(s)	1180
PkrI	GCNGC	9 cut(s)	212, 234, 237, 294, 309, 892, 895, 994, 1115
PleI	GAGTC	4 cut(s)	191, 278, 1213, 1303
PluTI	GGCGCC	1 cut(s)	211
PpsI	GAGTC	4 cut(s)	191, 278, 1213, 1303
PsiI	TTATAA	1 cut(s)	956
Psp6I	CCWGG	2 cut(s)	138, 943
PspEI	GGTNACC	1 cut(s)	1183
PspFI	CCCAGC	1 cut(s)	827
PspGI	CCWGG	2 cut(s)	138, 943
PspN4I	GGNNCC	6 cut(s)	9, 24, 209, 327, 949, 1000
PspPI	GGNCC	4 cut(s)	325, 658, 947, 1211
PstNI	CAGNNNCTG	1 cut(s)	827
PsyI	GACNNNGTC	1 cut(s)	762
PvuII	CAGCTG	1 cut(s)	893
RsaI	GTAC	1 cut(s)	173
RsaNI	GTAC	1 cut(s)	172
RseI	CAYNNNNRTG	1 cut(s)	158
SaqAI	TTAA	5 cut(s)	446, 519, 776, 1284, 1464
SatI	GCNGC	9 cut(s)	211, 233, 236, 293, 308, 891, 894, 993, 1114
Sau3AI	GATC	4 cut(s)	478, 586, 1018, 1333
Sau96I	GGNCC	4 cut(s)	325, 658, 947, 1211
SchI	GAGTC	4 cut(s)	191, 279, 1213, 1304
ScrFI	CCNGG	3 cut(s)	140, 329, 945
SduI	GDGCHC	1 cut(s)	1312
SfaNI	GCATC	4 cut(s)	877, 1069, 1122, 1345
SfcI	CTRYAG	1 cut(s)	1429
SfoI	GGCGCC	1 cut(s)	209
SinI	GGWCC	2 cut(s)	325, 947
SmiMI	CAYNNNNRTG	1 cut(s)	158
SphI	GCATGC	1 cut(s)	773
Sse9I	AATT	7 cut(s)	311, 492, 671, 812, 939, 977, 1380
SsiI	CCGC	6 cut(s)	5, 26, 32, 211, 233, 292
SspDI	GGCGCC	1 cut(s)	207
SspI	AATATT	1 cut(s)	1288
SspMI	CTAG	1 cut(s)	1361
StyD4I	CCNGG	3 cut(s)	138, 327, 943
StyI	CCWWGG	1 cut(s)	108
TaaI	ACNGT	5 cut(s)	510, 727, 856, 900, 1484
TaiI	ACGT	2 cut(s)	96, 763
TaqI	TCGA	3 cut(s)	538, 1017, 1052
TasI	AATT	7 cut(s)	311, 492, 671, 812, 939, 977, 1380
TauI	GCSGC	3 cut(s)	213, 235, 295
TfiI	GAWTC	8 cut(s)	55, 458, 866, 1235, 1274, 1412, 1501, 1508
Tru1I	TTAA	5 cut(s)	446, 519, 776, 1284, 1464
Tru9I	TTAA	5 cut(s)	446, 519, 776, 1284, 1464
TscAI	CASTG	6 cut(s)	122, 420, 481, 694, 757, 1309
TseFI	GTSAC	3 cut(s)	466, 638, 850
TseI	GCWGC	6 cut(s)	235, 307, 890, 893, 992, 1113
Tsp45I	GTSAC	3 cut(s)	466, 638, 850
TspDTI	ATGAA	9 cut(s)	334, 399, 537, 906, 977, 987, 1074, 1227, 1440
TspRI	CASTG	6 cut(s)	122, 420, 481, 694, 757, 1309
Tth111I	GACNNNGTC	1 cut(s)	762
VneI	GTGCAC	1 cut(s)	1308
VpaK11BI	GGWCC	2 cut(s)	325, 947
XceI	RCATGY	1 cut(s)	773
XcmI	CCANNNNNNNNNTGG	1 cut(s)	66
XmnI	GAANNNNTTC	1 cut(s)	934
XspI	CTAG	1 cut(s)	1361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.