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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05575 AT2G31945 |
| fragaria_vesca | FvH4_3g44500 FvH4_7g00010 |
| malus_domestica | MD00G1055400.v1.1 MD02G1319500.v1.1 MD03G1011900.v1.1 MD11G1015000.v1.1 |
| prunus_persica | Prupe.2G002500_v2.0.a1 Prupe.6G012500_v2.0.a1 |
| pyrus_communis | pycom11g01030 |
| rosa_chinensis | RchiOBHm_Chr1g0313231 RchiOBHm_Chr5g0081201 |
| rosa_laevigata | RLG00000036918 |
| rosa_multiflora | Rmu_sc0003219.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00002270 Rroxscaffold_4G00332320 |
| rosa_rugosa | Rorug05G0474400 RorugPtG0001900.1 |
| rosa_samantha | Rh1AG001900 Rh1CG006400 Rh1DG001800 Rh1DG050200 Rh5DG560600 |
| rosa_wichuraiana | Rw1G000100 Rw5G048930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 117 |
| AcuI | CTGAAG | 1 cut(s) | 315 |
| AfaI | GTAC | 1 cut(s) | 266 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 55 |
| AflII | CTTAAG | 1 cut(s) | 278 |
| AgsI | TTSAA | 3 cut(s) | 136, 158, 401 |
| AjnI | CCWGG | 1 cut(s) | 48 |
| AluBI | AGCT | 7 cut(s) | 12, 132, 143, 257, 283, 290, 374 |
| AluI | AGCT | 7 cut(s) | 12, 132, 143, 257, 283, 290, 374 |
| AlwI | GGATC | 1 cut(s) | 117 |
| AoxI | GGCC | 1 cut(s) | 360 |
| ApeKI | GCWGC | 3 cut(s) | 283, 371, 374 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 396, 425 |
| AsuHPI | GGTGA | 1 cut(s) | 40 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 12, 45 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 257, 289 |
| BbvI | GCAGC | 3 cut(s) | 270, 361, 383 |
| BciT130I | CCWGG | 1 cut(s) | 50 |
| BfrI | CTTAAG | 1 cut(s) | 278 |
| BisI | GCNGC | 3 cut(s) | 284, 372, 375 |
| BlpI | GCTNAGC | 1 cut(s) | 13 |
| BlsI | GCNGC | 3 cut(s) | 285, 373, 376 |
| Bme1390I | CCNGG | 1 cut(s) | 50 |
| BmrFI | CCNGG | 1 cut(s) | 50 |
| BmsI | GCATC | 1 cut(s) | 194 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 13 |
| BpuEI | CTTGAG | 1 cut(s) | 377 |
| BsaWI | WCCGGW | 1 cut(s) | 365 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 83, 113 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 55 |
| BseBI | CCWGG | 1 cut(s) | 50 |
| BseGI | GGATG | 1 cut(s) | 72 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 55 |
| BseRI | GAGGAG | 1 cut(s) | 91 |
| BseXI | GCAGC | 3 cut(s) | 270, 361, 383 |
| BsgI | GTGCAG | 1 cut(s) | 390 |
| BshFI | GGCC | 1 cut(s) | 362 |
| BsiSI | CCGG | 1 cut(s) | 366 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 55 |
| BsnI | GGCC | 1 cut(s) | 362 |
| Bsp143I | GATC | 2 cut(s) | 122, 146 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 13 |
| BspANI | GGCC | 1 cut(s) | 362 |
| BspPI | GGATC | 1 cut(s) | 117 |
| BspTI | CTTAAG | 1 cut(s) | 278 |
| BssMI | GATC | 2 cut(s) | 122, 146 |
| Bst2UI | CCWGG | 1 cut(s) | 50 |
| Bst4CI | ACNGT | 2 cut(s) | 162, 247 |
| BstAFI | CTTAAG | 1 cut(s) | 278 |
| BstC8I | GCNNGC | 1 cut(s) | 288 |
| BstDEI | CTNAG | 2 cut(s) | 13, 211 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 53 |
| BstF5I | GGATG | 1 cut(s) | 72 |
| BstKTI | GATC | 2 cut(s) | 125, 149 |
| BstMBI | GATC | 2 cut(s) | 122, 146 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 335, 368, 383 |
| BstNI | CCWGG | 1 cut(s) | 50 |
| BstSCI | CCNGG | 1 cut(s) | 48 |
| BstV1I | GCAGC | 3 cut(s) | 270, 361, 383 |
| BstX2I | RGATCY | 1 cut(s) | 122 |
| BstYI | RGATCY | 1 cut(s) | 122 |
| BsuRI | GGCC | 1 cut(s) | 362 |
| BtsCI | GGATG | 1 cut(s) | 72 |
| Cac8I | GCNNGC | 1 cut(s) | 288 |
| Csp6I | GTAC | 1 cut(s) | 265 |
| CviAII | CATG | 1 cut(s) | 115 |
| CviQI | GTAC | 1 cut(s) | 265 |
| DdeI | CTNAG | 2 cut(s) | 13, 211 |
| DpnI | GATC | 2 cut(s) | 124, 148 |
| DpnII | GATC | 2 cut(s) | 122, 146 |
| Eco147I | AGGCCT | 1 cut(s) | 362 |
| Eco57I | CTGAAG | 1 cut(s) | 315 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 53 |
| EcoRII | CCWGG | 1 cut(s) | 48 |
| FaeI | CATG | 1 cut(s) | 118 |
| FaiI | YATR | 2 cut(s) | 116, 129 |
| FatI | CATG | 1 cut(s) | 114 |
| Fnu4HI | GCNGC | 3 cut(s) | 284, 372, 375 |
| FokI | GGATG | 1 cut(s) | 59 |
| Fsp4HI | GCNGC | 3 cut(s) | 284, 372, 375 |
| GluI | GCNGC | 3 cut(s) | 284, 372, 375 |
| HaeIII | GGCC | 1 cut(s) | 362 |
| HapII | CCGG | 1 cut(s) | 366 |
| Hin1II | CATG | 1 cut(s) | 118 |
| HindIII | AAGCTT | 1 cut(s) | 255 |
| HpaII | CCGG | 1 cut(s) | 366 |
| HphI | GGTGA | 1 cut(s) | 40 |
| Hpy188I | TCNGA | 1 cut(s) | 190 |
| HpyAV | CCTTC | 1 cut(s) | 415 |
| HpyCH4III | ACNGT | 2 cut(s) | 162, 247 |
| HpyCH4IV | ACGT | 1 cut(s) | 23 |
| HpyCH4V | TGCA | 6 cut(s) | 185, 199, 229, 286, 371, 377 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 335, 368, 383 |
| HpyF3I | CTNAG | 2 cut(s) | 13, 211 |
| HpySE526I | ACGT | 1 cut(s) | 23 |
| Hsp92II | CATG | 1 cut(s) | 118 |
| Kzo9I | GATC | 2 cut(s) | 122, 146 |
| LpnPI | CCDG | 9 cut(s) | 35, 41, 53, 62, 135, 153, 360, 379, 425 |
| Lsp1109I | GCAGC | 3 cut(s) | 270, 361, 383 |
| LweI | GCATC | 1 cut(s) | 194 |
| MaeII | ACGT | 1 cut(s) | 23 |
| MaeIII | GTNAC | 1 cut(s) | 162 |
| MalI | GATC | 2 cut(s) | 124, 148 |
| MboI | GATC | 2 cut(s) | 122, 146 |
| MboII | GAAGA | 6 cut(s) | 43, 88, 262, 265, 308, 329 |
| MflI | RGATCY | 1 cut(s) | 122 |
| MluCI | AATT | 3 cut(s) | 5, 320, 442 |
| MmeI | TCCRAC | 2 cut(s) | 135, 396 |
| MnlI | CCTC | 4 cut(s) | 112, 295, 352, 373 |
| MroXI | GAANNNNTTC | 2 cut(s) | 396, 425 |
| MseI | TTAA | 1 cut(s) | 279 |
| MspA1I | CMGCKG | 1 cut(s) | 374 |
| MspCI | CTTAAG | 1 cut(s) | 278 |
| MspI | CCGG | 1 cut(s) | 366 |
| MspR9I | CCNGG | 1 cut(s) | 50 |
| MvaI | CCWGG | 1 cut(s) | 50 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 335, 368, 383 |
| NdeII | GATC | 2 cut(s) | 122, 146 |
| NlaIII | CATG | 1 cut(s) | 118 |
| PceI | AGGCCT | 1 cut(s) | 362 |
| PdmI | GAANNNNTTC | 2 cut(s) | 396, 425 |
| PkrI | GCNGC | 3 cut(s) | 285, 373, 376 |
| Psp6I | CCWGG | 1 cut(s) | 48 |
| PspGI | CCWGG | 1 cut(s) | 48 |
| PsuI | RGATCY | 1 cut(s) | 122 |
| PvuII | CAGCTG | 1 cut(s) | 374 |
| RsaI | GTAC | 1 cut(s) | 266 |
| RsaNI | GTAC | 1 cut(s) | 265 |
| SaqAI | TTAA | 1 cut(s) | 279 |
| SatI | GCNGC | 3 cut(s) | 284, 372, 375 |
| Sau3AI | GATC | 2 cut(s) | 122, 146 |
| ScrFI | CCNGG | 1 cut(s) | 50 |
| SetI | ASST | 9 cut(s) | 14, 26, 134, 145, 259, 285, 292, 306, 376 |
| SfaNI | GCATC | 1 cut(s) | 194 |
| SmlI | CTYRAG | 2 cut(s) | 278, 356 |
| SmoI | CTYRAG | 2 cut(s) | 278, 356 |
| Sse9I | AATT | 3 cut(s) | 5, 320, 442 |
| SseBI | AGGCCT | 1 cut(s) | 362 |
| StuI | AGGCCT | 1 cut(s) | 362 |
| StyD4I | CCNGG | 1 cut(s) | 48 |
| TaaI | ACNGT | 2 cut(s) | 162, 247 |
| TaiI | ACGT | 1 cut(s) | 26 |
| TaqI | TCGA | 1 cut(s) | 145 |
| TasI | AATT | 3 cut(s) | 5, 320, 442 |
| TatI | WGTACW | 1 cut(s) | 264 |
| Tru1I | TTAA | 1 cut(s) | 279 |
| Tru9I | TTAA | 1 cut(s) | 279 |
| TseI | GCWGC | 3 cut(s) | 283, 371, 374 |
| TspDTI | ATGAA | 1 cut(s) | 405 |
| Vha464I | CTTAAG | 1 cut(s) | 278 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 53 |
| XmnI | GAANNNNTTC | 2 cut(s) | 396, 425 |