No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05575 AT2G31945 |
| fragaria_vesca | FvH4_3g44500 FvH4_7g00010 |
| malus_domestica | MD00G1055400.v1.1 MD02G1319500.v1.1 MD03G1011900.v1.1 MD11G1015000.v1.1 |
| prunus_persica | Prupe.2G002500_v2.0.a1 Prupe.6G012500_v2.0.a1 |
| pyrus_communis | pycom11g01030 |
| rosa_chinensis | RchiOBHm_Chr1g0313231 RchiOBHm_Chr5g0081201 |
| rosa_laevigata | RLG00000036918 |
| rosa_multiflora | Rmu_sc0003219.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00002270 Rroxscaffold_4G00332320 |
| rosa_rugosa | Rorug05G0474400 RorugPtG0001900.1 |
| rosa_samantha | Rh1AG001900 Rh1CG006400 Rh1DG001800 Rh1DG050200 Rh5DG560600 |
| rosa_wichuraiana | Rw1G000100 Rw5G048930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 215 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 181 |
| AgsI | TTSAA | 3 cut(s) | 71, 96, 139 |
| AluBI | AGCT | 2 cut(s) | 74, 144 |
| AluI | AGCT | 2 cut(s) | 74, 144 |
| Alw26I | GTCTC | 1 cut(s) | 5 |
| AlwI | GGATC | 1 cut(s) | 215 |
| AoxI | GGCC | 1 cut(s) | 149 |
| ApeKI | GCWGC | 2 cut(s) | 212, 240 |
| AsuHPI | GGTGA | 1 cut(s) | 222 |
| AsuNHI | GCTAGC | 1 cut(s) | 164 |
| BbsI | GAAGAC | 1 cut(s) | 170 |
| BbvI | GCAGC | 2 cut(s) | 199, 252 |
| BccI | CCATC | 2 cut(s) | 197, 241 |
| BcoDI | GTCTC | 1 cut(s) | 5 |
| BfaI | CTAG | 1 cut(s) | 165 |
| BfmI | CTRYAG | 1 cut(s) | 238 |
| BisI | GCNGC | 2 cut(s) | 213, 241 |
| BlsI | GCNGC | 2 cut(s) | 214, 242 |
| BmsI | GCATC | 2 cut(s) | 175, 236 |
| BmtI | GCTAGC | 1 cut(s) | 168 |
| BpiI | GAAGAC | 1 cut(s) | 170 |
| BsaJI | CCNNGG | 1 cut(s) | 18 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 181 |
| Bse118I | RCCGGY | 1 cut(s) | 151 |
| Bse1I | ACTGG | 1 cut(s) | 211 |
| BseDI | CCNNGG | 1 cut(s) | 18 |
| BseGI | GGATG | 4 cut(s) | 87, 101, 190, 233 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 181 |
| BseNI | ACTGG | 1 cut(s) | 211 |
| BseRI | GAGGAG | 1 cut(s) | 23 |
| BseXI | GCAGC | 2 cut(s) | 199, 252 |
| BshFI | GGCC | 1 cut(s) | 151 |
| BsiSI | CCGG | 2 cut(s) | 152, 224 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 181 |
| BsmAI | GTCTC | 1 cut(s) | 5 |
| BsnI | GGCC | 1 cut(s) | 151 |
| Bsp143I | GATC | 1 cut(s) | 220 |
| BspANI | GGCC | 1 cut(s) | 151 |
| BspMAI | CTGCAG | 1 cut(s) | 242 |
| BspOI | GCTAGC | 1 cut(s) | 168 |
| BspPI | GGATC | 1 cut(s) | 215 |
| BsrFI | RCCGGY | 1 cut(s) | 151 |
| BsrI | ACTGG | 1 cut(s) | 211 |
| BssAI | RCCGGY | 1 cut(s) | 151 |
| BssECI | CCNNGG | 1 cut(s) | 18 |
| BssMI | GATC | 1 cut(s) | 220 |
| BssT1I | CCWWGG | 1 cut(s) | 18 |
| Bst4CI | ACNGT | 1 cut(s) | 176 |
| Bst6I | CTCTTC | 1 cut(s) | 116 |
| BstC8I | GCNNGC | 1 cut(s) | 166 |
| BstF5I | GGATG | 4 cut(s) | 87, 101, 190, 233 |
| BstKTI | GATC | 1 cut(s) | 223 |
| BstMAI | GTCTC | 1 cut(s) | 5 |
| BstMBI | GATC | 1 cut(s) | 220 |
| BstSFI | CTRYAG | 1 cut(s) | 238 |
| BstV1I | GCAGC | 2 cut(s) | 199, 252 |
| BstV2I | GAAGAC | 1 cut(s) | 170 |
| BsuRI | GGCC | 1 cut(s) | 151 |
| BtsCI | GGATG | 4 cut(s) | 87, 101, 190, 233 |
| Cac8I | GCNNGC | 1 cut(s) | 166 |
| Cfr10I | RCCGGY | 1 cut(s) | 151 |
| CviJI | RGCY | 5 cut(s) | 53, 74, 144, 151, 243 |
| CviKI_1 | RGCY | 5 cut(s) | 53, 74, 144, 151, 243 |
| DpnI | GATC | 1 cut(s) | 222 |
| DpnII | GATC | 1 cut(s) | 220 |
| Eam1104I | CTCTTC | 1 cut(s) | 116 |
| EarI | CTCTTC | 1 cut(s) | 116 |
| Eco130I | CCWWGG | 1 cut(s) | 18 |
| EcoT14I | CCWWGG | 1 cut(s) | 18 |
| ErhI | CCWWGG | 1 cut(s) | 18 |
| FaiI | YATR | 2 cut(s) | 56, 261 |
| Fnu4HI | GCNGC | 2 cut(s) | 213, 241 |
| FokI | GGATG | 4 cut(s) | 74, 88, 197, 220 |
| Fsp4HI | GCNGC | 2 cut(s) | 213, 241 |
| FspBI | CTAG | 1 cut(s) | 165 |
| GluI | GCNGC | 2 cut(s) | 213, 241 |
| HaeIII | GGCC | 1 cut(s) | 151 |
| HapII | CCGG | 2 cut(s) | 152, 224 |
| HindIII | AAGCTT | 1 cut(s) | 72 |
| HpaII | CCGG | 2 cut(s) | 152, 224 |
| HphI | GGTGA | 1 cut(s) | 222 |
| Hpy188I | TCNGA | 1 cut(s) | 196 |
| Hpy188III | TCNNGA | 1 cut(s) | 182 |
| HpyAV | CCTTC | 1 cut(s) | 40 |
| HpyCH4III | ACNGT | 1 cut(s) | 176 |
| HpyCH4V | TGCA | 1 cut(s) | 240 |
| Kzo9I | GATC | 1 cut(s) | 220 |
| LpnPI | CCDG | 5 cut(s) | 165, 167, 192, 237, 250 |
| Lsp1109I | GCAGC | 2 cut(s) | 199, 252 |
| LweI | GCATC | 2 cut(s) | 175, 236 |
| MaeI | CTAG | 1 cut(s) | 165 |
| MalI | GATC | 1 cut(s) | 222 |
| MboI | GATC | 1 cut(s) | 220 |
| MboII | GAAGA | 2 cut(s) | 103, 170 |
| MluCI | AATT | 1 cut(s) | 125 |
| MnlI | CCTC | 1 cut(s) | 123 |
| MseI | TTAA | 1 cut(s) | 171 |
| MslI | CAYNNNNRTG | 1 cut(s) | 41 |
| MspI | CCGG | 2 cut(s) | 152, 224 |
| NdeII | GATC | 1 cut(s) | 220 |
| NheI | GCTAGC | 1 cut(s) | 164 |
| PkrI | GCNGC | 2 cut(s) | 214, 242 |
| PstI | CTGCAG | 1 cut(s) | 242 |
| RseI | CAYNNNNRTG | 1 cut(s) | 41 |
| SaqAI | TTAA | 1 cut(s) | 171 |
| SatI | GCNGC | 2 cut(s) | 213, 241 |
| Sau3AI | GATC | 1 cut(s) | 220 |
| SetI | ASST | 4 cut(s) | 51, 76, 134, 146 |
| SfaNI | GCATC | 2 cut(s) | 175, 236 |
| SfcI | CTRYAG | 1 cut(s) | 238 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 41 |
| Sse9I | AATT | 1 cut(s) | 125 |
| SspMI | CTAG | 1 cut(s) | 165 |
| StyI | CCWWGG | 1 cut(s) | 18 |
| TaaI | ACNGT | 1 cut(s) | 176 |
| TasI | AATT | 1 cut(s) | 125 |
| Tru1I | TTAA | 1 cut(s) | 171 |
| Tru9I | TTAA | 1 cut(s) | 171 |
| TseI | GCWGC | 2 cut(s) | 212, 240 |
| TspDTI | ATGAA | 2 cut(s) | 59, 90 |
| XspI | CTAG | 1 cut(s) | 165 |