Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0007852

Physical Location & Seq

Genomic Coordinates Reverse (-)

2450271 .. 2454431

Gene Structure 4161 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g02120.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGCCACCTCCCAAGTTCACCTTGTTCTACGGCCACCGCAAGCCCTCCCGCAACCGCCCCACAGTCCGCGGCAACCGCCTCTCTCTCTCCCAACCCAATCCCAAACCCATCCCCATCCCCACTCAATCCCAGCCCTTCGATCTCTCTAAATGGCACCCCCACACCAACCAATCCCCGCCGTCCACCTCATCCCCCTCCGCCGCCCCCGTCGTCTCTCTCTCCCACCTCTCCCCCATCGCCCGCTTCATCCTCGACGCCTTCCGCAAAAACCGCAACCACTGGGGCCCGCCGGTCGTGGCCGAGCTCCACAAGCTCCGCCGCGTCACCCCCGACCTCGTCGCCGAGGTCCTCAAGGTCCAAAACGACCCCGTTTCGGCCTCCAAGCTGTTCCACTGGGCCGGTAAGCAGAAGGGCTTCAAGCACACCTTCGCATCCTACAACGCCTTGACTTATTGCCTGAACCGGGCCCACCGGTTCAGGTCGGCCGATCAAGTCCCCGACTTGATGGACTCTCAGGGGAAGCCCCCGACCGAGAAGCAGTTTGAGATTCTGATCAGAATGCACTCTGATGCCAATAGAGGTCTCAGGGTTTATCATGTCTTTCGGAAAATGAAGACATTTGGGGTTAAACCCCGGGTGTTCTTGTACAATAGGGTGATGGATGCATTGGTCAGGACCGGGCATTTTGATTTGGCATTGTCGGTTTACCACGATTTTCGGGGTGATGGGTTGGTGGAGGAGAGTGTTACTTATATGATCTTGATAAAGGGGATGTGCAAATGTGGAAGAGTGGATGAAATGTTGCAGCTTTTGGAGAGAATGAGGGTGAATTTGTGTAAGCCGGACGTGTTTGCGTACACGGCGATGATCAGGGTGTTGGTTTCGGAGGGTCATTTGGATGGTTGTTTGAAGGTTTGGGAGGAAATGAGGAGGGATAGAGTTGAGGCGGATGCGATGGCGTATGTGACTCTGGTTACGGGGTTGTGTAAAGGAGGCAGGGTGGAGAAGGGGTATGAGTTGTTTAGGGAGATGAAGGAGAAGGGCTTCTTGATTGATAGAGCGATTTACGGGGTGCTGGTTGAGGGGTTTGTGGAAGACAGGAAGGTTGGGGCAGCGTGTGATTTGTTGAAGGATTTGGTGGCGTCGGGGTATAGAGCAGATTTGGGGATATATAATTCTCTGATCAAGGGTTTATGTGATGTTAAACGGGTTGATAAGGCATATAAGCTTTTCCGAGTTGCAGTTCAAGAGGGTCTTGGGCCAGATTTTGCAACGGTGAATCCAATTATGGTGTCTTATGCTGATATGAGAAGAATGGATAACTTTTGCGACTTGCTTGCACAGATGGAGAAATGTGGTCGTCCTGTTATTGATGATCTTTCAAAATTTTTCTCCATGTTGACTGAGAAGGAGGATGGAGTAATGATGGCTTTGGAAGTGTTTGAAGAGTTGAAAGTTAAAAGTTATTATAGTGTTGCGATATACAATATCCTTATTGCTGGCCTCCACAAATTTGGGAAAGTGAAGAAAGCATTATCCCTCTTTGATGAAATGAAATCCTTTAATTTCCAGCCTGACTCGTCCACTTATAGCTCCGCGATTATATGTTATATGGAAGAAGGGGATCTCCATGAAGCTTGTGCCTGTCATAATAAGATAATTGAGATGTCTTGTGTTCCTTCTGTAGCTGCCTATCGCTCTCTTGCTAAAGGGCTTTTCAATGTTGGAGAGATTGATGCAGTTATGCTGTTAGTCCGGGACTGCTTAGCCAGTGTGACAAGTGGGCCCATGGCTTTCAAGTACTCTCTTACCGTTCTCAATGCATGTAGATCCAAGAATGCTGAGAAGGTGATTGATGTAATGAATGAGATGATGCAGCAGGGTTGTCCACCAGATCATGTTGTATACTCTGCTATAATCTCTGGCATGTGTAAGCATGGCACAATAGAGGAGGCAAGGAAGGTATTTTCAAATTTGAAAGAGCGCAAACTCATAACAGAAGCCAACATGATTTTGTATGATGATATGTTAATTGAACACATGAAGAAGAAGACAGCAGATCTGATAGTGTCAGGTTTGAAGTTTTTTGGTTTAGAATCCAAGTTGAAAGCAAAGGGTTGTAATCTGCTGTCAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3 PPR_long

Protein Analysis

713

Amino Acids

80.31

Weight (kDa)

9.04

Isoelectric Point (pI)

37.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	137 - 279	2.9e-09	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	248 - 293	2.4e-12	PPR repeat family
PPR_1	PF12854	248 - 275	1.5e-07	PPR repeat
PPR	PF01535	249 - 275	3.5e-06	PPR repeat
PPR_2	PF13041	281 - 330	4.7e-11	PPR repeat family
PPR_1	PF12854	314 - 345	6.7e-07	PPR repeat
PPR_2	PF13041	317 - 364	1.7e-07	PPR repeat family
PPR	PF01535	320 - 349	4.1e-07	PPR repeat
PPR_1	PF12854	383 - 412	1.1e-06	PPR repeat
PPR_2	PF13041	389 - 426	5.4e-06	PPR repeat family
PPR_2	PF13041	492 - 534	2.2e-12	PPR repeat family
PPR_1	PF12854	492 - 519	1e-05	PPR repeat
PPR	PF01535	494 - 523	6.5e-07	PPR repeat
PPR_2	PF13041	609 - 645	7.7e-08	PPR repeat family
PPR_1	PF12854	628 - 657	6.2e-09	PPR repeat
PPR_2	PF13041	631 - 663	5.1e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007852)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20740
fragaria_vesca	FvH4_7g02120 FvH4_7g02120 FvH4_7g02120 FvH4_7g02120 FvH4_7g02120 FvH4_7g02120
malus_domestica	MD02G1297100.v1.1 MD07G1026900.v1.1
prunus_persica	Prupe.2G027000_v2.0.a1 Prupe.2G027000_v2.0.a1
pyrus_communis	pycom02g25030 pycom07g02030 pycom07g02070
rosa_chinensis	RchiOBHm_Chr1g0319391
rosa_laevigata	RLG00000030490
rosa_multiflora	Rmu_sc0005870.1_g000005
rosa_roxburghii	Rroxscaffold_4G00328510
rosa_rugosa	Rorug01G0027200
rosa_samantha	Rh1AG039500 Rh1BG036300 Rh1CG038400 Rh1DG031400
rosa_wichuraiana	Rw1G003160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	153
AccI	GTMKAC	1 cut(s)	1905
AccII	CGCG	3 cut(s)	69, 321, 1598
AclWI	GGATC	2 cut(s)	1632, 1824
AcoI	YGGCCR	3 cut(s)	31, 297, 483
AcsI	RAATTY	4 cut(s)	829, 1385, 1511, 1972
AcyI	GRCGYC	2 cut(s)	255, 1142
AfaI	GTAC	3 cut(s)	647, 857, 1802
AfiI	CCNNNNNNNGG	2 cut(s)	373, 463
AflIII	ACRYGT	1 cut(s)	846
AgeI	ACCGGT	1 cut(s)	471
AjiI	CACGTC	1 cut(s)	847
AluBI	AGCT	8 cut(s)	304, 313, 385, 808, 1228, 1593, 1637, 1688
AluI	AGCT	8 cut(s)	304, 313, 385, 808, 1228, 1593, 1637, 1688
Alw21I	GWGCWC	1 cut(s)	306
Alw26I	GTCTC	2 cut(s)	217, 587
AlwI	GGATC	2 cut(s)	1632, 1824
Ama87I	CYCGRG	1 cut(s)	633
ApaI	GGGCCC	3 cut(s)	287, 469, 1788
ApeKI	GCWGC	4 cut(s)	805, 1112, 1688, 1876
ApoI	RAATTY	4 cut(s)	829, 1385, 1511, 1972
AsiGI	ACCGGT	1 cut(s)	471
Asp700I	GAANNNNTTC	2 cut(s)	413, 1043
AspLEI	GCGC	1 cut(s)	1986
AsuC2I	CCSGG	5 cut(s)	464, 634, 635, 679, 1757
AsuHPI	GGTGA	7 cut(s)	10, 316, 667, 734, 838, 1288, 1861
AvaI	CYCGRG	1 cut(s)	633
AvaII	GGWCC	3 cut(s)	346, 355, 675
BaeGI	GKGCMC	3 cut(s)	287, 469, 1788
BanI	GGYRCC	1 cut(s)	153
BanII	GRGCYC	4 cut(s)	287, 306, 469, 1788
BbsI	GAAGAC	3 cut(s)	620, 1101, 2057
Bbv12I	GWGCWC	1 cut(s)	306
BbvI	GCAGC	4 cut(s)	817, 1124, 1675, 1888
BceAI	ACGGC	3 cut(s)	46, 163, 876
BcgI	CGANNNNNNTGC	2 cut(s)	1319, 1353
BclI	TGATCA	3 cut(s)	552, 867, 1182
BcnI	CCSGG	5 cut(s)	464, 634, 635, 679, 1757
BcoDI	GTCTC	2 cut(s)	217, 587
BfmI	CTRYAG	1 cut(s)	1683
BglII	AGATCT	1 cut(s)	2059
BisI	GCNGC	7 cut(s)	70, 201, 319, 806, 1113, 1689, 1877
BlpI	GCTNAGC	1 cut(s)	1765
BlsI	GCNGC	7 cut(s)	71, 202, 320, 807, 1114, 1690, 1878
BmcAI	AGTACT	1 cut(s)	1802
Bme1390I	CCNGG	5 cut(s)	464, 634, 635, 679, 1757
Bme18I	GGWCC	3 cut(s)	346, 355, 675
BmeT110I	CYCGRG	1 cut(s)	633
BmgBI	CACGTC	1 cut(s)	847
BmiI	GGNNCC	5 cut(s)	155, 284, 285, 467, 1786
BmrFI	CCNGG	5 cut(s)	464, 634, 635, 679, 1757
BmrI	ACTGGG	2 cut(s)	289, 403
BmsI	GCATC	6 cut(s)	440, 559, 652, 940, 1726, 1863
BmuI	ACTGGG	2 cut(s)	289, 403
BpiI	GAAGAC	3 cut(s)	620, 1101, 2057
Bpu1102I	GCTNAGC	1 cut(s)	1765
BpuEI	CTTGAG	1 cut(s)	335
BpuMI	CCSGG	5 cut(s)	464, 634, 635, 679, 1757
BsaBI	GATNNNNATC	1 cut(s)	551
BsaHI	GRCGYC	2 cut(s)	255, 1142
BsaI	GGTCTC	1 cut(s)	587
BsaJI	CCNNGG	5 cut(s)	67, 342, 632, 633, 1788
BsaWI	WCCGGW	1 cut(s)	471
BsaXI	ACNNNNNCTCC	4 cut(s)	984, 995, 1014, 1025
Bsc4I	CCNNNNNNNGG	2 cut(s)	373, 463
Bse118I	RCCGGY	3 cut(s)	289, 398, 471
Bse1I	ACTGG	3 cut(s)	284, 398, 1770
Bse8I	GATNNNNATC	1 cut(s)	551
BseDI	CCNNGG	5 cut(s)	67, 342, 632, 633, 1788
BseJI	GATNNNNATC	1 cut(s)	551
BseLI	CCNNNNNNNGG	2 cut(s)	373, 463
BseMII	CTCAG	4 cut(s)	527, 598, 1395, 1833
BseNI	ACTGG	3 cut(s)	284, 398, 1770
BseRI	GAGGAG	3 cut(s)	752, 943, 1964
BseSI	GKGCMC	3 cut(s)	287, 469, 1788
BseX3I	CGGCCG	1 cut(s)	483
BseXI	GCAGC	4 cut(s)	817, 1124, 1675, 1888
BseYI	CCCAGC	1 cut(s)	129
Bsh1236I	CGCG	3 cut(s)	69, 321, 1598
Bsh1285I	CGRYCG	3 cut(s)	294, 486, 531
BshNI	GGYRCC	1 cut(s)	153
BshTI	ACCGGT	1 cut(s)	471
BsiEI	CGRYCG	3 cut(s)	294, 486, 531
BsiHKAI	GWGCWC	1 cut(s)	306
BsiHKCI	CYCGRG	1 cut(s)	633
BsiSI	CCGG	8 cut(s)	290, 399, 463, 472, 634, 678, 842, 1756
BslFI	GGGAC	2 cut(s)	479, 1772
BslI	CCNNNNNNNGG	2 cut(s)	373, 463
BsmAI	GTCTC	2 cut(s)	217, 587
BsmBI	CGTCTC	1 cut(s)	217
BsmFI	GGGAC	2 cut(s)	479, 1772
BsmI	GAATGC	2 cut(s)	564, 1843
Bso31I	GGTCTC	1 cut(s)	587
BsoBI	CYCGRG	1 cut(s)	633
Bsp120I	GGGCCC	3 cut(s)	283, 465, 1784
Bsp1286I	GDGCHC	4 cut(s)	287, 306, 469, 1788
Bsp1407I	TGTACA	1 cut(s)	645
Bsp1720I	GCTNAGC	1 cut(s)	1765
Bsp19I	CCATGG	1 cut(s)	1788
BspCNI	CTCAG	4 cut(s)	526, 597, 1396, 1834
BspFNI	CGCG	3 cut(s)	69, 321, 1598
BspLI	GGNNCC	5 cut(s)	155, 284, 285, 467, 1786
BspPI	GGATC	2 cut(s)	1632, 1824
BspT107I	GGYRCC	1 cut(s)	153
BspTNI	GGTCTC	1 cut(s)	587
BsrFI	RCCGGY	3 cut(s)	289, 398, 471
BsrGI	TGTACA	1 cut(s)	645
BsrI	ACTGG	3 cut(s)	284, 398, 1770
BssAI	RCCGGY	3 cut(s)	289, 398, 471
BssECI	CCNNGG	5 cut(s)	67, 342, 632, 633, 1788
BssNAI	GTATAC	1 cut(s)	1906
BssNI	GRCGYC	2 cut(s)	255, 1142
BssT1I	CCWWGG	1 cut(s)	1788
Bst1107I	GTATAC	1 cut(s)	1906
Bst4CI	ACNGT	3 cut(s)	64, 1276, 1813
Bst6I	CTCTTC	2 cut(s)	781, 1440
BstACI	GRCGYC	2 cut(s)	255, 1142
BstAUI	TGTACA	1 cut(s)	645
BstC8I	GCNNGC	5 cut(s)	41, 241, 287, 1338, 1501
BstDEI	CTNAG	5 cut(s)	513, 584, 1404, 1765, 1842
BstDSI	CCRYGG	2 cut(s)	67, 1788
BstFNI	CGCG	3 cut(s)	69, 321, 1598
BstHHI	GCGC	1 cut(s)	1986
BstMAI	GTCTC	2 cut(s)	217, 587
BstMCI	CGRYCG	3 cut(s)	294, 486, 531
BstMWI	GCNNNNNNNGC	4 cut(s)	75, 270, 310, 860
BstNSI	RCATGY	2 cut(s)	1827, 1930
BstSCI	CCNGG	5 cut(s)	462, 632, 633, 677, 1755
BstSFI	CTRYAG	1 cut(s)	1683
BstSLI	GKGCMC	3 cut(s)	287, 469, 1788
BstUI	CGCG	3 cut(s)	69, 321, 1598
BstV1I	GCAGC	4 cut(s)	817, 1124, 1675, 1888
BstV2I	GAAGAC	3 cut(s)	620, 1101, 2057
BstX2I	RGATCY	3 cut(s)	1624, 1829, 2059
BstXI	CCANNNNNNTGG	1 cut(s)	1514
BstYI	RGATCY	3 cut(s)	1624, 1829, 2059
BstZ17I	GTATAC	1 cut(s)	1906
BstZI	CGGCCG	1 cut(s)	483
BtgI	CCRYGG	2 cut(s)	67, 1788
BtgZI	GCGATG	3 cut(s)	220, 878, 968
BtrI	CACGTC	1 cut(s)	847
BtsIMutI	CAGTG	3 cut(s)	277, 391, 1777
Cac8I	GCNNGC	5 cut(s)	41, 241, 287, 1338, 1501
CfoI	GCGC	1 cut(s)	1986
Cfr10I	RCCGGY	3 cut(s)	289, 398, 471
Cfr42I	CCGCGG	1 cut(s)	70
Cfr9I	CCCGGG	1 cut(s)	633
CseI	GACGC	3 cut(s)	263, 310, 1131
Csp6I	GTAC	3 cut(s)	646, 856, 1801
CspAI	ACCGGT	1 cut(s)	471
CviQI	GTAC	3 cut(s)	646, 856, 1801
DdeI	CTNAG	5 cut(s)	513, 584, 1404, 1765, 1842
EaeI	YGGCCR	3 cut(s)	31, 297, 483
EagI	CGGCCG	1 cut(s)	483
Eam1104I	CTCTTC	2 cut(s)	781, 1440
EarI	CTCTTC	2 cut(s)	781, 1440
EciI	GGCGGA	3 cut(s)	187, 305, 962
Ecl136II	GAGCTC	1 cut(s)	304
EclXI	CGGCCG	1 cut(s)	483
Eco130I	CCWWGG	1 cut(s)	1788
Eco24I	GRGCYC	4 cut(s)	287, 306, 469, 1788
Eco31I	GGTCTC	1 cut(s)	587
Eco47I	GGWCC	3 cut(s)	346, 355, 675
Eco52I	CGGCCG	1 cut(s)	483
Eco53kI	GAGCTC	1 cut(s)	304
Eco88I	CYCGRG	1 cut(s)	633
EcoICRI	GAGCTC	1 cut(s)	304
EcoO109I	RGGNCCY	2 cut(s)	283, 346
EcoT14I	CCWWGG	1 cut(s)	1788
EcoT22I	ATGCAT	2 cut(s)	667, 1825
EcoT38I	GRGCYC	4 cut(s)	287, 306, 469, 1788
ErhI	CCWWGG	1 cut(s)	1788
Esp3I	CGTCTC	1 cut(s)	217
FalI	AAGNNNNNCTT	7 cut(s)	37, 410, 442, 1031, 1063, 1239, 1271
FaqI	GGGAC	2 cut(s)	479, 1772
FauI	CCCGC	4 cut(s)	56, 183, 248, 294
FbaI	TGATCA	3 cut(s)	552, 867, 1182
FblI	GTMKAC	1 cut(s)	1905
Fnu4HI	GCNGC	7 cut(s)	70, 201, 319, 806, 1113, 1689, 1877
FriOI	GRGCYC	4 cut(s)	287, 306, 469, 1788
Fsp4HI	GCNGC	7 cut(s)	70, 201, 319, 806, 1113, 1689, 1877
GlaI	GCGC	1 cut(s)	1985
GluI	GCNGC	7 cut(s)	70, 201, 319, 806, 1113, 1689, 1877
GsaI	CCCAGC	1 cut(s)	133
HapII	CCGG	8 cut(s)	290, 399, 463, 472, 634, 678, 842, 1756
HgaI	GACGC	3 cut(s)	263, 310, 1131
HhaI	GCGC	1 cut(s)	1986
Hin1I	GRCGYC	2 cut(s)	255, 1142
Hin6I	GCGC	1 cut(s)	1984
HinP1I	GCGC	1 cut(s)	1984
HincII	GTYRAC	1 cut(s)	1401
HindII	GTYRAC	1 cut(s)	1401
HindIII	AAGCTT	2 cut(s)	1226, 1635
HinfI	GANTC	6 cut(s)	509, 547, 967, 1279, 1577, 2096
HpaII	CCGG	8 cut(s)	290, 399, 463, 472, 634, 678, 842, 1756
HphI	GGTGA	7 cut(s)	10, 316, 667, 734, 838, 1288, 1861
Hpy166II	GTNNAC	8 cut(s)	18, 183, 706, 858, 1401, 1584, 1889, 1906
Hpy188I	TCNGA	8 cut(s)	552, 557, 568, 606, 886, 1182, 1235, 2064
Hpy188III	TCNNGA	4 cut(s)	673, 760, 1048, 1247
Hpy8I	GTNNAC	8 cut(s)	18, 183, 706, 858, 1401, 1584, 1889, 1906
Hpy99I	CGWCG	4 cut(s)	212, 257, 341, 1147
HpyCH4III	ACNGT	3 cut(s)	64, 1276, 1813
HpyCH4IV	ACGT	1 cut(s)	846
HpyF10VI	GCNNNNNNNGC	4 cut(s)	75, 270, 310, 860
HpyF3I	CTNAG	5 cut(s)	513, 584, 1404, 1765, 1842
HpySE526I	ACGT	1 cut(s)	846
Hsp92I	GRCGYC	2 cut(s)	255, 1142
HspAI	GCGC	1 cut(s)	1984
Ksp22I	TGATCA	3 cut(s)	552, 867, 1182
KspI	CCGCGG	1 cut(s)	70
LmnI	GCTCC	3 cut(s)	309, 318, 1598
Lsp1109I	GCAGC	4 cut(s)	817, 1124, 1675, 1888
LweI	GCATC	6 cut(s)	440, 559, 652, 940, 1726, 1863
MaeII	ACGT	1 cut(s)	846
MaeIII	GTNAC	5 cut(s)	322, 745, 964, 973, 1774
MflI	RGATCY	3 cut(s)	1624, 1829, 2059
MhlI	GDGCHC	4 cut(s)	287, 306, 469, 1788
MluCI	AATT	9 cut(s)	829, 1174, 1284, 1385, 1511, 1564, 1659, 1972, 2031
MlyI	GAGTC	3 cut(s)	503, 961, 1571
MmeI	TCCRAC	1 cut(s)	1705
Mph1103I	ATGCAT	2 cut(s)	667, 1825
MroXI	GAANNNNTTC	2 cut(s)	413, 1043
MseI	TTAA	5 cut(s)	627, 1203, 1458, 1563, 2030
MslI	CAYNNNNRTG	3 cut(s)	567, 863, 897
MspA1I	CMGCKG	1 cut(s)	69
MspI	CCGG	8 cut(s)	290, 399, 463, 472, 634, 678, 842, 1756
MspR9I	CCNGG	5 cut(s)	464, 634, 635, 679, 1757
Mva1269I	GAATGC	2 cut(s)	564, 1843
MvnI	CGCG	3 cut(s)	69, 321, 1598
MwoI	GCNNNNNNNGC	4 cut(s)	75, 270, 310, 860
NciI	CCSGG	5 cut(s)	464, 634, 635, 679, 1757
NcoI	CCATGG	1 cut(s)	1788
NlaIV	GGNNCC	5 cut(s)	155, 284, 285, 467, 1786
NmeAIII	GCCGAG	2 cut(s)	325, 367
NmuCI	GTSAC	3 cut(s)	322, 964, 1774
NsiI	ATGCAT	2 cut(s)	667, 1825
NspI	RCATGY	2 cut(s)	1827, 1930
PctI	GAATGC	2 cut(s)	564, 1843
PdmI	GAANNNNTTC	2 cut(s)	413, 1043
PfeI	GAWTC	3 cut(s)	547, 1279, 2096
PflFI	GACNNNGTC	1 cut(s)	335
PfoI	TCCNGGA	1 cut(s)	1755
PinAI	ACCGGT	1 cut(s)	471
PkrI	GCNGC	7 cut(s)	71, 202, 320, 807, 1114, 1690, 1878
PleI	GAGTC	3 cut(s)	503, 961, 1571
PpsI	GAGTC	3 cut(s)	503, 961, 1571
PpuMI	RGGWCCY	1 cut(s)	346
Psp124BI	GAGCTC	1 cut(s)	306
Psp5II	RGGWCCY	1 cut(s)	346
PspFI	CCCAGC	1 cut(s)	129
PspN4I	GGNNCC	5 cut(s)	155, 284, 285, 467, 1786
PspOMI	GGGCCC	3 cut(s)	283, 465, 1784
PspPPI	RGGWCCY	1 cut(s)	346
PsuI	RGATCY	3 cut(s)	1624, 1829, 2059
PsyI	GACNNNGTC	1 cut(s)	335
RsaI	GTAC	3 cut(s)	647, 857, 1802
RsaNI	GTAC	3 cut(s)	646, 856, 1801
RseI	CAYNNNNRTG	3 cut(s)	567, 863, 897
SacI	GAGCTC	1 cut(s)	306
SacII	CCGCGG	1 cut(s)	70
SaqAI	TTAA	5 cut(s)	627, 1203, 1458, 1563, 2030
SatI	GCNGC	7 cut(s)	70, 201, 319, 806, 1113, 1689, 1877
ScaI	AGTACT	1 cut(s)	1802
SchI	GAGTC	3 cut(s)	503, 961, 1571
ScrFI	CCNGG	5 cut(s)	464, 634, 635, 679, 1757
SduI	GDGCHC	4 cut(s)	287, 306, 469, 1788
SfaNI	GCATC	6 cut(s)	440, 559, 652, 940, 1726, 1863
SfcI	CTRYAG	1 cut(s)	1683
Sfr303I	CCGCGG	1 cut(s)	70
SgrBI	CCGCGG	1 cut(s)	70
SinI	GGWCC	3 cut(s)	346, 355, 675
SmaI	CCCGGG	1 cut(s)	635
SmiMI	CAYNNNNRTG	3 cut(s)	567, 863, 897
SmlI	CTYRAG	1 cut(s)	350
SmoI	CTYRAG	1 cut(s)	350
Sse9I	AATT	9 cut(s)	829, 1174, 1284, 1385, 1511, 1564, 1659, 1972, 2031
SstI	GAGCTC	1 cut(s)	306
StyD4I	CCNGG	5 cut(s)	462, 632, 633, 677, 1755
StyI	CCWWGG	1 cut(s)	1788
TaaI	ACNGT	3 cut(s)	64, 1276, 1813
TaiI	ACGT	1 cut(s)	849
TaqI	TCGA	2 cut(s)	138, 252
TaqII	GACCGA	1 cut(s)	545
TasI	AATT	9 cut(s)	829, 1174, 1284, 1385, 1511, 1564, 1659, 1972, 2031
TatI	WGTACW	2 cut(s)	645, 1800
TauI	GCSGC	3 cut(s)	72, 203, 321
TfiI	GAWTC	3 cut(s)	547, 1279, 2096
Tru1I	TTAA	5 cut(s)	627, 1203, 1458, 1563, 2030
Tru9I	TTAA	5 cut(s)	627, 1203, 1458, 1563, 2030
TscAI	CASTG	3 cut(s)	284, 398, 1777
TseFI	GTSAC	3 cut(s)	322, 964, 1774
TseI	GCWGC	4 cut(s)	805, 1112, 1688, 1876
Tsp45I	GTSAC	3 cut(s)	322, 964, 1774
TspDTI	ATGAA	9 cut(s)	235, 626, 810, 1046, 1563, 1568, 1647, 1877, 2057
TspMI	CCCGGG	1 cut(s)	633
TspRI	CASTG	3 cut(s)	284, 398, 1777
Tth111I	GACNNNGTC	1 cut(s)	335
VpaK11BI	GGWCC	3 cut(s)	346, 355, 675
XapI	RAATTY	4 cut(s)	829, 1385, 1511, 1972
XceI	RCATGY	2 cut(s)	1827, 1930
XmaI	CCCGGG	1 cut(s)	633
XmiI	GTMKAC	1 cut(s)	1905
XmnI	GAANNNNTTC	2 cut(s)	413, 1043
ZrmI	AGTACT	1 cut(s)	1802
Zsp2I	ATGCAT	2 cut(s)	667, 1825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.