Rh1CG038400

PPR repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0007852
Physical Location & Seq
Forward (+)
7462618 .. 7466826
4209 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG038400.1

Sequence Viewer

Length: 2127 bp
ATGCCCCCTCCTCCCAAGTTCTCCTTGTTCTACGGCCACCGCAACCCCTCCCGGAACCGCCCCACCGTCCGCGGCAGCCGCCTCTCCCCCCCAAAACCCAACCCCACCCCAACTCAATCCCAGCCCTTCGATCTCTCCAAGTGGGACCCCCACCAATCTCCGCCGTCCACCTCCTCCACCTCCACCCCCAACCCCGCCGTCCCCCTCTCCTTCCTCTCCCCCATCGCCCGCTTCATCCTCGACGCCTTCCGCAAGAACCGCAACCGCTGGGGCCCGCCGGTCGTCTCGGAGCTCCAGAAGCTCCGCCGCGTCACCCCCGACCTGGTCGCCGAGGTCCTCAAGGTCCAAAACGACCCCGTTTCGGCCGCCAAGCTCTTCCACTGGGCAGGTAAGCAAAAGGGTTTCAAGCACACCTTCGCTTCCTACAATGCCTTGACCTATTGCCTGAACCGGGCCCACCGGTTCAGGTCGGCCGACCAAGTCCCCGATTTGATGGAGTCTCAGGGGAAACCCCCCACCGAGAAACAGTTTGAGATTCTGATCAGAATGCACTCTGATGCCAATAGAGGTCTTAGGGTTTACCATGTCTATGAGAAGATGAAGAAGTTTGGGGTTAAACCCAGGGTTTATTTGTACAATAGGGTAATGGATGCATTGGTCAAAACGGGTCATTTGGATTTGGCATTGTCGGTTTACGGAGATTTTCGGGGTGATGGACTGGTGGAGGAGAGTGTGACTTTTATGATTTTGATAAAGGGGATGTGTAAATGTGGGAGAGTTGATGAAATGTTGGGACTTTTGGATAGAATGAGGGTGAGTTTGTGTAAGCCGGACGTGTTTGCTTACACCGCAATGATAAAGGTGATGGTTTCGGAGGGTGATTTGGATGGTTGTTTGAAGGTTTGGGAGGAAATGAGGAGGGATAGAGTTGAGGCGGATGCTATGGCGTATGTGACTCTGGTTACAGGGTTGTGTAAAGGAGGGAGGGTGGAGAAGGGGTATGAGTTGTTTAGGGAGATGAAGGAGAAGGGTTTTTTGATTGATAGAGCGATTTATGGGGTGCTGGTTGAGGGGTTTGTGGAAGACAGGAAGGTTGGGGCAGCGTGTGATTTGTTGAAGGATTTGGTGGGATCAGGGTATAGAGCAGATTTGGGGATATATAATTCTCTGATCAAGGGTTTATGTGATGTTAAACGGGTTGATAAGGCTTATAAGCTTTTCCGAGTTGCAGTTCAAGAGGGTCTTGGGCCGGATTTTGCGACGGTGAATCCCATTCTGGTGTCTTATGCTGAGATGAGAAAAATGGATAACTTTTGCGAGTTGCTTGCACAGATGGAGAAATGCGGTTGTCCTGTTATTGATGATCTTTTGAAATTCTTTTCCTTTGTTGCTGAAAAGGAGGATGGAGTCATGATGGCTTTGGAAGTGTTTGAAGACTTGAAAGTTAAAAAGTATTCTAGTGTTGCGATCTACAATATCCTTATTGCCAGCCTCCACAAATTTGGGAAAGTGAAGAAAGCATTATCCCTCTTTGATGAGATGAAGAGTTTTGATTTCCAGCCGGACTCGTCCACTTATAGCTCTGCGATTATGTGTTATATTGAAGAAGGGGATCTCCATGAAGCTTGTGCCTGTCATAATAAGATAATTGAAATGTCTTGTGTTCCTTCTATTGCTGCCTATCGCTCTCTTGCTAAAGGGCTTTTCAATGTTGGAGAGATTGATGCAGTTATGCTGCTAGTCCGGGACTGCTTAGCCAGTGTGACAAGTGGGCCCATGACATTCAAGTATTCTCTTACCATTCTCCATGCATGTAGATCCAATAATGCTGAGAAGGTGATTGATGTACTGAATGAGATGATGCAGCAGGGTTGTCCACCAGATCATGTTATATACTCTGCTATAATCTCTGGCATGTGTAAGCATGGCACAATAGAGGAGGCAAGGAAGGTATTTTCAAATTTGAAAGAGCGCAAACTTATAACAGAAGCCAACATGATTGTGTATGATGATATATTAATTGAACACATGAAGAAGAAGACAGCAGATCTGGTAGTGTCAGGGTTGAAGTTTTTTGGTTTAGAATCCAAGCTGAAAGCAAAGGGTTGTAAACTGCTGTCAGGTTGA

Protein Analysis

708

Amino Acids

79.51

Weight (kDa)

8.86

Isoelectric Point (pI)

36.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 118 - 276 7.7e-09 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 244 - 288 1e-10 PPR repeat family
PPR_1 PF12854 244 - 271 2.6e-06 PPR repeat
PPR_2 PF13041 277 - 326 5e-11 PPR repeat family
PPR_1 PF12854 310 - 341 6.7e-07 PPR repeat
PPR_2 PF13041 313 - 360 1.7e-07 PPR repeat family
PPR PF01535 316 - 345 4.1e-07 PPR repeat
PPR_1 PF12854 379 - 408 1.1e-06 PPR repeat
PPR_2 PF13041 385 - 423 3.7e-06 PPR repeat family
PPR_2 PF13041 487 - 530 3e-11 PPR repeat family
PPR PF01535 490 - 518 3.1e-06 PPR repeat
PPR_1 PF12854 624 - 653 5.6e-09 PPR repeat
PPR_2 PF13041 627 - 659 4.2e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1212, 1982
Acc36I ACCTGC 1 cut(s) 377
AccII CGCG 2 cut(s) 72, 309
AclWI GGATC 3 cut(s) 1138, 1620, 1812
AcoI YGGCCR 3 cut(s) 34, 363, 471
AcsI RAATTY 3 cut(s) 1373, 1499, 1960
AcyI GRCGYC 1 cut(s) 243
AfaI GTAC 2 cut(s) 635, 1848
AfiI CCNNNNNNNGG 3 cut(s) 322, 361, 451
AflIII ACRYGT 1 cut(s) 834
AgeI ACCGGT 1 cut(s) 459
AjiI CACGTC 1 cut(s) 835
AjnI CCWGG 2 cut(s) 321, 620
AluBI AGCT 7 cut(s) 292, 301, 373, 1216, 1581, 1625, 2092
AluI AGCT 7 cut(s) 292, 301, 373, 1216, 1581, 1625, 2092
Alw21I GWGCWC 1 cut(s) 294
Alw26I GTCTC 2 cut(s) 289, 504
AlwI GGATC 3 cut(s) 1138, 1620, 1812
AoxI GGCC 7 cut(s) 34, 271, 363, 453, 471, 1247, 1772
ApaI GGGCCC 3 cut(s) 275, 457, 1776
ApeKI GCWGC 5 cut(s) 75, 1100, 1676, 1735, 1864
ApoI RAATTY 3 cut(s) 1373, 1499, 1960
AseI ATTAAT 1 cut(s) 2018
AsiGI ACCGGT 1 cut(s) 459
AspLEI GCGC 1 cut(s) 1974
AsuC2I CCSGG 3 cut(s) 52, 452, 1745
AsuHPI GGTGA 7 cut(s) 304, 722, 826, 874, 890, 1276, 1849
AvaII GGWCC 3 cut(s) 145, 334, 343
BaeGI GKGCMC 3 cut(s) 275, 457, 1776
BanII GRGCYC 4 cut(s) 275, 294, 457, 1776
BbsI GAAGAC 3 cut(s) 1089, 1440, 2045
Bbv12I GWGCWC 1 cut(s) 294
BbvI GCAGC 5 cut(s) 87, 1112, 1663, 1722, 1876
BccI CCATC 8 cut(s) 230, 487, 707, 859, 881, 1327, 1397, 1408
BceAI ACGGC 3 cut(s) 49, 148, 182
BcgI CGANNNNNNTGC 2 cut(s) 1307, 1341
BciT130I CCWGG 2 cut(s) 323, 622
BclI TGATCA 2 cut(s) 540, 1170
BcnI CCSGG 3 cut(s) 52, 452, 1745
BcoDI GTCTC 2 cut(s) 289, 504
BfaI CTAG 2 cut(s) 1458, 1739
BfuAI ACCTGC 1 cut(s) 377
BglII AGATCT 1 cut(s) 2047
BisI GCNGC 9 cut(s) 73, 76, 79, 307, 366, 1101, 1677, 1736, 1865
BlpI GCTNAGC 1 cut(s) 1753
BlsI GCNGC 9 cut(s) 74, 77, 80, 308, 367, 1102, 1678, 1737, 1866
Bme1390I CCNGG 5 cut(s) 52, 323, 452, 622, 1745
Bme18I GGWCC 3 cut(s) 145, 334, 343
BmgBI CACGTC 1 cut(s) 835
BmiI GGNNCC 7 cut(s) 56, 146, 147, 272, 273, 455, 1774
BmrFI CCNGG 5 cut(s) 52, 323, 452, 622, 1745
BmrI ACTGGG 1 cut(s) 391
BmsI GCATC 5 cut(s) 547, 640, 928, 1714, 1851
BmuI ACTGGG 1 cut(s) 391
BpiI GAAGAC 3 cut(s) 1089, 1440, 2045
BpmI CTGGAG 1 cut(s) 278
Bpu1102I GCTNAGC 1 cut(s) 1753
BpuEI CTTGAG 1 cut(s) 323
BpuMI CCSGG 3 cut(s) 52, 452, 1745
BsaBI GATNNNNATC 1 cut(s) 539
BsaHI GRCGYC 1 cut(s) 243
BsaJI CCNNGG 4 cut(s) 70, 330, 620, 621
BsaWI WCCGGW 1 cut(s) 459
BsaXI ACNNNNNCTCC 4 cut(s) 972, 983, 1002, 1013
Bsc4I CCNNNNNNNGG 3 cut(s) 322, 361, 451
Bse118I RCCGGY 2 cut(s) 277, 459
Bse1I ACTGG 3 cut(s) 386, 723, 1758
Bse3DI GCAATG 1 cut(s) 858
Bse8I GATNNNNATC 1 cut(s) 539
BseBI CCWGG 2 cut(s) 323, 622
BseDI CCNNGG 4 cut(s) 70, 330, 620, 621
BseGI GGATG 6 cut(s) 234, 655, 765, 892, 943, 1408
BseJI GATNNNNATC 1 cut(s) 539
BseLI CCNNNNNNNGG 3 cut(s) 322, 361, 451
BseMI GCAATG 1 cut(s) 858
BseMII CTCAG 3 cut(s) 515, 1281, 1821
BseNI ACTGG 3 cut(s) 386, 723, 1758
BseRI GAGGAG 4 cut(s) 163, 740, 931, 1952
BseSI GKGCMC 3 cut(s) 275, 457, 1776
BseX3I CGGCCG 2 cut(s) 363, 471
BseXI GCAGC 5 cut(s) 87, 1112, 1663, 1722, 1876
BseYI CCCAGC 2 cut(s) 120, 267
Bsh1236I CGCG 2 cut(s) 72, 309
Bsh1285I CGRYCG 3 cut(s) 282, 366, 474
BshFI GGCC 7 cut(s) 36, 273, 365, 455, 473, 1249, 1774
BshTI ACCGGT 1 cut(s) 459
BsiEI CGRYCG 3 cut(s) 282, 366, 474
BsiHKAI GWGCWC 1 cut(s) 294
BsiSI CCGG 8 cut(s) 52, 278, 451, 460, 830, 1250, 1562, 1744
BslFI GGGAC 5 cut(s) 158, 185, 467, 807, 1760
BslI CCNNNNNNNGG 3 cut(s) 322, 361, 451
BsmAI GTCTC 2 cut(s) 289, 504
BsmBI CGTCTC 1 cut(s) 289
BsmFI GGGAC 5 cut(s) 158, 185, 467, 807, 1760
BsmI GAATGC 1 cut(s) 552
BsnI GGCC 7 cut(s) 36, 273, 365, 455, 473, 1249, 1774
Bsp120I GGGCCC 3 cut(s) 271, 453, 1772
Bsp1286I GDGCHC 4 cut(s) 275, 294, 457, 1776
Bsp1407I TGTACA 1 cut(s) 633
Bsp1720I GCTNAGC 1 cut(s) 1753
BspANI GGCC 7 cut(s) 36, 273, 365, 455, 473, 1249, 1774
BspCNI CTCAG 3 cut(s) 514, 1282, 1822
BspFNI CGCG 2 cut(s) 72, 309
BspHI TCATGA 1 cut(s) 1410
BspLI GGNNCC 7 cut(s) 56, 146, 147, 272, 273, 455, 1774
BspMI ACCTGC 1 cut(s) 377
BspPI GGATC 3 cut(s) 1138, 1620, 1812
BspQI GCTCTTC 1 cut(s) 380
BsrDI GCAATG 1 cut(s) 858
BsrFI RCCGGY 2 cut(s) 277, 459
BsrGI TGTACA 1 cut(s) 633
BsrI ACTGG 3 cut(s) 386, 723, 1758
BssAI RCCGGY 2 cut(s) 277, 459
BssECI CCNNGG 4 cut(s) 70, 330, 620, 621
BssNI GRCGYC 1 cut(s) 243
Bst2UI CCWGG 2 cut(s) 323, 622
Bst4CI ACNGT 3 cut(s) 67, 528, 1264
Bst6I CTCTTC 2 cut(s) 380, 1538
BstACI GRCGYC 1 cut(s) 243
BstAUI TGTACA 1 cut(s) 633
BstC8I GCNNGC 4 cut(s) 229, 275, 1326, 1489
BstDEI CTNAG 5 cut(s) 501, 572, 1290, 1753, 1830
BstDSI CCRYGG 1 cut(s) 70
BstF5I GGATG 6 cut(s) 234, 655, 765, 892, 943, 1408
BstFNI CGCG 2 cut(s) 72, 309
BstHHI GCGC 1 cut(s) 1974
BstMAI GTCTC 2 cut(s) 289, 504
BstMCI CGRYCG 3 cut(s) 282, 366, 474
BstMWI GCNNNNNNNGC 4 cut(s) 78, 258, 298, 848
BstNI CCWGG 2 cut(s) 323, 622
BstNSI RCATGY 2 cut(s) 1815, 1918
BstSCI CCNGG 5 cut(s) 50, 321, 450, 620, 1743
BstSLI GKGCMC 3 cut(s) 275, 457, 1776
BstUI CGCG 2 cut(s) 72, 309
BstV1I GCAGC 5 cut(s) 87, 1112, 1663, 1722, 1876
BstV2I GAAGAC 3 cut(s) 1089, 1440, 2045
BstX2I RGATCY 3 cut(s) 1612, 1817, 2047
BstXI CCANNNNNNTGG 1 cut(s) 1502
BstYI RGATCY 3 cut(s) 1612, 1817, 2047
BstZI CGGCCG 2 cut(s) 363, 471
BsuRI GGCC 7 cut(s) 36, 273, 365, 455, 473, 1249, 1774
BtgI CCRYGG 1 cut(s) 70
BtgZI GCGATG 1 cut(s) 208
BtrI CACGTC 1 cut(s) 835
BtsCI GGATG 6 cut(s) 234, 655, 765, 892, 943, 1408
BtsIMutI CAGTG 2 cut(s) 379, 1765
BveI ACCTGC 1 cut(s) 377
Cac8I GCNNGC 4 cut(s) 229, 275, 1326, 1489
CciI TCATGA 1 cut(s) 1410
CfoI GCGC 1 cut(s) 1974
Cfr10I RCCGGY 2 cut(s) 277, 459
Cfr42I CCGCGG 1 cut(s) 73
CseI GACGC 2 cut(s) 251, 298
CsiI ACCWGGT 1 cut(s) 321
Csp6I GTAC 2 cut(s) 634, 1847
CspAI ACCGGT 1 cut(s) 459
CviQI GTAC 2 cut(s) 634, 1847
DdeI CTNAG 5 cut(s) 501, 572, 1290, 1753, 1830
EaeI YGGCCR 3 cut(s) 34, 363, 471
EagI CGGCCG 2 cut(s) 363, 471
Eam1104I CTCTTC 2 cut(s) 380, 1538
EarI CTCTTC 2 cut(s) 380, 1538
EciI GGCGGA 3 cut(s) 150, 293, 950
Ecl136II GAGCTC 1 cut(s) 292
EclXI CGGCCG 2 cut(s) 363, 471
Eco24I GRGCYC 4 cut(s) 275, 294, 457, 1776
Eco47I GGWCC 3 cut(s) 145, 334, 343
Eco52I CGGCCG 2 cut(s) 363, 471
Eco53kI GAGCTC 1 cut(s) 292
EcoICRI GAGCTC 1 cut(s) 292
EcoO109I RGGNCCY 3 cut(s) 145, 271, 334
EcoRII CCWGG 2 cut(s) 321, 620
EcoT22I ATGCAT 2 cut(s) 655, 1813
EcoT38I GRGCYC 4 cut(s) 275, 294, 457, 1776
Esp3I CGTCTC 1 cut(s) 289
FalI AAGNNNNNCTT 6 cut(s) 8, 40, 398, 430, 1227, 1259
FaqI GGGAC 5 cut(s) 158, 185, 467, 807, 1760
FauI CCCGC 3 cut(s) 202, 236, 282
FbaI TGATCA 2 cut(s) 540, 1170
Fnu4HI GCNGC 9 cut(s) 73, 76, 79, 307, 366, 1101, 1677, 1736, 1865
FokI GGATG 6 cut(s) 221, 662, 772, 899, 950, 1415
FriOI GRGCYC 4 cut(s) 275, 294, 457, 1776
Fsp4HI GCNGC 9 cut(s) 73, 76, 79, 307, 366, 1101, 1677, 1736, 1865
FspBI CTAG 2 cut(s) 1458, 1739
GlaI GCGC 1 cut(s) 1973
GluI GCNGC 9 cut(s) 73, 76, 79, 307, 366, 1101, 1677, 1736, 1865
GsaI CCCAGC 2 cut(s) 124, 271
GsuI CTGGAG 1 cut(s) 278
HaeIII GGCC 7 cut(s) 36, 273, 365, 455, 473, 1249, 1774
HapII CCGG 8 cut(s) 52, 278, 451, 460, 830, 1250, 1562, 1744
HgaI GACGC 2 cut(s) 251, 298
HhaI GCGC 1 cut(s) 1974
Hin1I GRCGYC 1 cut(s) 243
Hin6I GCGC 1 cut(s) 1972
HinP1I GCGC 1 cut(s) 1972
HindIII AAGCTT 2 cut(s) 1214, 1623
HinfI GANTC 7 cut(s) 497, 535, 955, 1267, 1407, 1565, 2084
HpaII CCGG 8 cut(s) 52, 278, 451, 460, 830, 1250, 1562, 1744
HphI GGTGA 7 cut(s) 304, 722, 826, 874, 890, 1276, 1849
Hpy166II GTNNAC 6 cut(s) 168, 580, 694, 1572, 1877, 2111
Hpy188I TCNGA 7 cut(s) 289, 540, 545, 556, 874, 1170, 1223
Hpy188III TCNNGA 3 cut(s) 295, 1235, 1411
Hpy8I GTNNAC 6 cut(s) 168, 580, 694, 1572, 1877, 2111
Hpy99I CGWCG 2 cut(s) 245, 1264
HpyCH4III ACNGT 3 cut(s) 67, 528, 1264
HpyCH4IV ACGT 1 cut(s) 834
HpyCH4V TGCA 7 cut(s) 550, 653, 1229, 1328, 1727, 1811, 1864
HpyF10VI GCNNNNNNNGC 4 cut(s) 78, 258, 298, 848
HpyF3I CTNAG 5 cut(s) 501, 572, 1290, 1753, 1830
HpySE526I ACGT 1 cut(s) 834
Hsp92I GRCGYC 1 cut(s) 243
HspAI GCGC 1 cut(s) 1972
KflI GGGWCCC 1 cut(s) 145
Ksp22I TGATCA 2 cut(s) 540, 1170
KspI CCGCGG 1 cut(s) 73
LguI GCTCTTC 1 cut(s) 380
LmnI GCTCC 3 cut(s) 289, 297, 306
Lsp1109I GCAGC 5 cut(s) 87, 1112, 1663, 1722, 1876
LweI GCATC 5 cut(s) 547, 640, 928, 1714, 1851
MabI ACCWGGT 1 cut(s) 321
MaeI CTAG 2 cut(s) 1458, 1739
MaeII ACGT 1 cut(s) 834
MaeIII GTNAC 5 cut(s) 310, 733, 952, 961, 1762
MflI RGATCY 3 cut(s) 1612, 1817, 2047
MhlI GDGCHC 4 cut(s) 275, 294, 457, 1776
MluCI AATT 6 cut(s) 1162, 1373, 1499, 1647, 1960, 2019
MlyI GAGTC 4 cut(s) 506, 949, 1416, 1559
MmeI TCCRAC 1 cut(s) 1693
Mph1103I ATGCAT 2 cut(s) 655, 1813
MseI TTAA 4 cut(s) 615, 1191, 1446, 2018
MslI CAYNNNNRTG 5 cut(s) 555, 588, 851, 1277, 2000
MspA1I CMGCKG 2 cut(s) 72, 267
MspI CCGG 8 cut(s) 52, 278, 451, 460, 830, 1250, 1562, 1744
MspR9I CCNGG 5 cut(s) 52, 323, 452, 622, 1745
Mva1269I GAATGC 1 cut(s) 552
MvaI CCWGG 2 cut(s) 323, 622
MvnI CGCG 2 cut(s) 72, 309
MwoI GCNNNNNNNGC 4 cut(s) 78, 258, 298, 848
NciI CCSGG 3 cut(s) 52, 452, 1745
NlaIV GGNNCC 7 cut(s) 56, 146, 147, 272, 273, 455, 1774
NmeAIII GCCGAG 1 cut(s) 355
NmuCI GTSAC 4 cut(s) 310, 733, 952, 1762
NsiI ATGCAT 2 cut(s) 655, 1813
NspI RCATGY 2 cut(s) 1815, 1918
PagI TCATGA 1 cut(s) 1410
PasI CCCWGGG 1 cut(s) 621
PciSI GCTCTTC 1 cut(s) 380
PctI GAATGC 1 cut(s) 552
PfeI GAWTC 3 cut(s) 535, 1267, 2084
PflFI GACNNNGTC 2 cut(s) 323, 479
PfoI TCCNGGA 2 cut(s) 50, 1743
PinAI ACCGGT 1 cut(s) 459
PkrI GCNGC 9 cut(s) 74, 77, 80, 308, 367, 1102, 1678, 1737, 1866
PleI GAGTC 4 cut(s) 505, 949, 1415, 1559
PpsI GAGTC 4 cut(s) 505, 949, 1415, 1559
PpuMI RGGWCCY 2 cut(s) 145, 334
PshBI ATTAAT 1 cut(s) 2018
PsiI TTATAA 2 cut(s) 1212, 1982
Psp124BI GAGCTC 1 cut(s) 294
Psp5II RGGWCCY 2 cut(s) 145, 334
Psp6I CCWGG 2 cut(s) 321, 620
PspFI CCCAGC 2 cut(s) 120, 267
PspGI CCWGG 2 cut(s) 321, 620
PspN4I GGNNCC 7 cut(s) 56, 146, 147, 272, 273, 455, 1774
PspOMI GGGCCC 3 cut(s) 271, 453, 1772
PspPPI RGGWCCY 2 cut(s) 145, 334
PsuI RGATCY 3 cut(s) 1612, 1817, 2047
PsyI GACNNNGTC 2 cut(s) 323, 479
RsaI GTAC 2 cut(s) 635, 1848
RsaNI GTAC 2 cut(s) 634, 1847
RseI CAYNNNNRTG 5 cut(s) 555, 588, 851, 1277, 2000
SacI GAGCTC 1 cut(s) 294
SacII CCGCGG 1 cut(s) 73
SapI GCTCTTC 1 cut(s) 380
SaqAI TTAA 4 cut(s) 615, 1191, 1446, 2018
SatI GCNGC 9 cut(s) 73, 76, 79, 307, 366, 1101, 1677, 1736, 1865
SchI GAGTC 4 cut(s) 506, 949, 1416, 1559
ScrFI CCNGG 5 cut(s) 52, 323, 452, 622, 1745
SduI GDGCHC 4 cut(s) 275, 294, 457, 1776
SexAI ACCWGGT 1 cut(s) 321
SfaNI GCATC 5 cut(s) 547, 640, 928, 1714, 1851
Sfr303I CCGCGG 1 cut(s) 73
SgrBI CCGCGG 1 cut(s) 73
SinI GGWCC 3 cut(s) 145, 334, 343
SmiMI CAYNNNNRTG 5 cut(s) 555, 588, 851, 1277, 2000
SmlI CTYRAG 1 cut(s) 338
SmoI CTYRAG 1 cut(s) 338
Sse9I AATT 6 cut(s) 1162, 1373, 1499, 1647, 1960, 2019
SspMI CTAG 2 cut(s) 1458, 1739
SstI GAGCTC 1 cut(s) 294
StyD4I CCNGG 5 cut(s) 50, 321, 450, 620, 1743
TaaI ACNGT 3 cut(s) 67, 528, 1264
TaiI ACGT 1 cut(s) 837
TaqI TCGA 2 cut(s) 129, 240
TasI AATT 6 cut(s) 1162, 1373, 1499, 1647, 1960, 2019
TatI WGTACW 2 cut(s) 633, 1846
TauI GCSGC 4 cut(s) 75, 81, 309, 368
TfiI GAWTC 3 cut(s) 535, 1267, 2084
Tru1I TTAA 4 cut(s) 615, 1191, 1446, 2018
Tru9I TTAA 4 cut(s) 615, 1191, 1446, 2018
TscAI CASTG 2 cut(s) 386, 1765
TseFI GTSAC 4 cut(s) 310, 733, 952, 1762
TseI GCWGC 5 cut(s) 75, 1100, 1676, 1735, 1864
Tsp45I GTSAC 4 cut(s) 310, 733, 952, 1762
TspDTI ATGAA 7 cut(s) 223, 614, 798, 1034, 1556, 1635, 2045
TspGWI ACGGA 1 cut(s) 711
TspRI CASTG 2 cut(s) 386, 1765
Tth111I GACNNNGTC 2 cut(s) 323, 479
VpaK11BI GGWCC 3 cut(s) 145, 334, 343
VspI ATTAAT 1 cut(s) 2018
XapI RAATTY 3 cut(s) 1373, 1499, 1960
XceI RCATGY 2 cut(s) 1815, 1918
XspI CTAG 2 cut(s) 1458, 1739
Zsp2I ATGCAT 2 cut(s) 655, 1813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.